ClCG02G023590 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G023590
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLipoxygenase
LocationCG_Chr02 : 37945795 .. 37946729 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCGTATGCGATCGCCACAAATAGGCAATTAAGTACACTGCACCCAATCTATAGACTATTGCATCCTCATTTTCGGTATAATATGCGAATAAATGCAAATGCTCGTGAAAGTCTCATAAATGCTGGAGGAATCATTGAGACAACATTTTCTACTGCATCTCATTCCATGGAACTTAGTTCTTCGGTGTACAAGAAGGAGTGGCAATTTGACCAACAGGCACTCCCTGAGGACCTAATTCGTAGGTAATTAATTTAATTTAATTAACTTAAGACGAATGTTAATACATGGAATTACTAACACCATGTTTTGTCATTGAATTTAAAATTAGGGGGATGGCACAGAAAAAGAAAGATGAACATGGTAATTATGAGAAAGATGCTCAAGGTCATGATGTTCTTGAGTTGGCCATCAAAGACTACCCTTTTGCAAATGATGGTCTCATCTTATGGAATGCCCTGTTGGATTGGGTGACAGAATATGTGAACCACTATTATGGAGATGACGAGAATGCAGTAATGAATGATAAAGAGTTGAATGCATGGTGGGGAGAAATCCAAGGAAAAGGGCATCCAGATAAAAATATAGGATGGCCCACACTAAAAACCAAGGAGGACCTAATTAAAATTGTATCAACCATAGCATGGGTGGGAAGTGGGCACCACTCGGCTGTGAACTTCATTCAATACGCATATGCAGGCTATACTCCCAACCGACCTAGTATTGCAAGGACCAACATGCTCACGGAGGACTTTCCCCAACTTCCAGAAGACTTTATAGACCAACCTGAAAATGAGTTGCTTCAAGTCTTCCCTTCAGTTGATCAAGTTTCTACAGTGACAACTACTATGATTTTGTTGTCAGCTCATTCTCCAGATGAGGAGTACATTGGGGATGAAATAGAACCAGCTTGGGCTGAGGAACCCTCCATA

mRNA sequence

ATGGAGCCGTATGCGATCGCCACAAATAGGCAATTAAGTACACTGCACCCAATCTATAGACTATTGCATCCTCATTTTCGGTATAATATGCGAATAAATGCAAATGCTCGTGAAAGTCTCATAAATGCTGGAGGAATCATTGAGACAACATTTTCTACTGCATCTCATTCCATGGAACTTAGTTCTTCGGTGTACAAGAAGGAGTGGCAATTTGACCAACAGGCACTCCCTGAGGACCTAATTCGTAGGACCAACATGCTCACGGAGGACTTTCCCCAACTTCCAGAAGACTTTATAGACCAACCTGAAAATGAGTTGCTTCAAGTCTTCCCTTCAGTTGATCAAGTTTCTACAGTGACAACTACTATGATTTTGTTGTCAGCTCATTCTCCAGATGAGGAGTACATTGGGGATGAAATAGAACCAGCTTGGGCTGAGGAACCCTCCATA

Coding sequence (CDS)

ATGGAGCCGTATGCGATCGCCACAAATAGGCAATTAAGTACACTGCACCCAATCTATAGACTATTGCATCCTCATTTTCGGTATAATATGCGAATAAATGCAAATGCTCGTGAAAGTCTCATAAATGCTGGAGGAATCATTGAGACAACATTTTCTACTGCATCTCATTCCATGGAACTTAGTTCTTCGGTGTACAAGAAGGAGTGGCAATTTGACCAACAGGCACTCCCTGAGGACCTAATTCGTAGGACCAACATGCTCACGGAGGACTTTCCCCAACTTCCAGAAGACTTTATAGACCAACCTGAAAATGAGTTGCTTCAAGTCTTCCCTTCAGTTGATCAAGTTTCTACAGTGACAACTACTATGATTTTGTTGTCAGCTCATTCTCCAGATGAGGAGTACATTGGGGATGAAATAGAACCAGCTTGGGCTGAGGAACCCTCCATA

Protein sequence

MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELSSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPAWAEEPSI
Homology
[Close]
BLAST of ClCG02G023590 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.0e-28
Identity = 71/148 (47.97%), Postives = 88/148 (59.46%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           +EPY IATNRQLS +HP+YRLLHPHFRY M INA ARE+LINA GIIE  F    +S+EL
Sbjct: 564 VEPYIIATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAFLAGKYSIEL 623

Query: 61  SSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLPEDFIDQP-ENELLQVFPSVDQVSTV 120
           SS  Y   WQF+ +ALPEDLI R   +  D  +L     D P  ++ L ++ S+ Q ++ 
Sbjct: 624 SSVAYGAAWQFNTEALPEDLINRGLAVRRDDGELELAIKDYPYADDGLLIWGSIKQWASD 683

Query: 121 TTTMILLSAHSPDEEYIGDEIEPAWAEE 148
                    +  D +  GDE   AW EE
Sbjct: 684 YVDFY----YKSDGDVAGDEELRAWWEE 707


HSP 2 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1 

Query: 35  NARESLINAGGIIETTFSTASHSMELSSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQL 94
           + +E+L+    II   + T+ H   ++   Y     F  +     ++RR   + E+    
Sbjct: 726 DTKENLVQILTII--MWVTSGHHAAVNFGQYHYAGYFPNRPT---VVRRNIPVEENRDDE 785

Query: 95  PEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPAWAEEPSI 151
            + F+ +PE  LLQ  PS  Q   V  T+ +LS+HSPDEEY+G+  EPAW  EP +
Sbjct: 786 MKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMV 836

[Close]
BLAST of ClCG02G023590 vs. Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.8e-27
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPY IATNRQLST+HP+Y+LLHPH RY + INA AR+SLIN GGIIE+ F+   ++MEL
Sbjct: 583 MEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMEL 642

Query: 61  SSSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           SS+ YK  W+FD + LP DL+RR  M  ED
Sbjct: 643 SSAAYKSMWRFDMEGLPADLVRR-GMAEED 671


HSP 2 Score: 34.7 bits (78), Expect = 1.1e+00
Identity = 18/57 (31.58%), Postives = 27/57 (47.37%), Query Frame = 1 

Query: 96  EDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGD--EIEPAWAEEPSI 151
           E F+  P+   L   P+  Q + V      LS HSPDEEY+ +  E++  W ++  +
Sbjct: 801 EMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQV 857

[Close]
BLAST of ClCG02G023590 vs. Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-27
Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IA NRQLS +HPIYRLLHPHFRY M INA AR+SL+N GGIIET F    +++ELS
Sbjct: 563 EPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELS 622

Query: 62  SSVYKKEWQFDQQALPEDLIRR 84
           S+VY K W+FDQ+ LP DLI+R
Sbjct: 623 SAVYGKLWRFDQEGLPADLIKR 644


HSP 2 Score: 64.7 bits (156), Expect = 9.9e-10
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1 

Query: 83  RTNMLTED-FPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIE 142
           R  M TED   +  ++F + PE  LL+ +PS  Q + V  T+ LLS HSPDEEYIG++ E
Sbjct: 768 RIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQE 827

Query: 143 PAWAEEPSI 151
            +WA EP I
Sbjct: 828 ASWANEPVI 836

[Close]
BLAST of ClCG02G023590 vs. Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.8e-27
Identity = 64/116 (55.17%), Postives = 77/116 (66.38%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           +EPY IA NRQLS +HPIYRLLHPHFR+ M INA AR  LI A GIIE TFS    SME+
Sbjct: 596 VEPYVIAANRQLSQMHPIYRLLHPHFRFTMEINAQARGMLICADGIIEKTFSPGEFSMEI 655

Query: 61  SSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLPEDFIDQP-ENELLQVFPSVDQ 116
           SS+ Y K+W+FD +ALPEDLIRR   +  +  +L     D P  N+ L V+ ++ Q
Sbjct: 656 SSAAYDKQWRFDMEALPEDLIRRGMAVRGEDGKLELAIEDYPYANDGLLVWDAIKQ 711

[Close]
BLAST of ClCG02G023590 vs. Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IA NRQLS +HP+YRLLHPHFR+ M INA AR  LINAGGIIE +F    +S+ELS
Sbjct: 596 EPYIIAANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVPGEYSLELS 655

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLPEDFIDQP-ENELLQVFPSVDQ 116
           S  Y ++W+FD +ALPEDLIRR   +     +L     D P  N+ L V+ ++ Q
Sbjct: 656 SVAYDQQWRFDMEALPEDLIRRGMAVRNPNGELELAIEDYPYANDGLLVWDAIKQ 710


HSP 2 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 30/65 (46.15%), Postives = 35/65 (53.85%), Query Frame = 1 

Query: 83  RTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEP 142
           R NM TE       DF++ PE  LL  FPS  Q + V   + LLS HS DEEY+G   EP
Sbjct: 799 RRNMPTEIGGDDMRDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEP 858

Query: 143 AWAEE 148
           AW ++
Sbjct: 859 AWTKD 863

[Close]
BLAST of ClCG02G023590 vs. TrEMBL
Match: A0A0B2QKD1_GLYSO (Lipoxygenase OS=Glycine soja GN=glysoja_008788 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.0e-30
Identity = 73/149 (48.99%), Postives = 89/149 (59.73%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY +ATNRQLS +HPIYRLLHPHFRY M INA ARE+LIN  GIIE++FS   HS+ LS
Sbjct: 477 EPYILATNRQLSAMHPIYRLLHPHFRYTMEINALAREALINGDGIIESSFSPGKHSILLS 536

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTT 121
           S  Y ++WQFD Q                   LP+D I +                 V T
Sbjct: 537 SIAYDQQWQFDLQ------------------SLPKDLISRG--------------MAVMT 593

Query: 122 TMILLSAHSPDEEYIGDEIEPAWAEEPSI 151
            + +LS HSPDEEY+G+ +EPAW EEP +
Sbjct: 597 VLDILSNHSPDEEYLGETVEPAWEEEPLV 593

[Close]
BLAST of ClCG02G023590 vs. TrEMBL
Match: S4UKZ5_MALDO (Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28
Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IATNRQLS +HPIYRLLHPHFRY M IN+ ARESLINAGGIIET+FS   +S+EL 
Sbjct: 605 EPYIIATNRQLSVMHPIYRLLHPHFRYTMEINSLARESLINAGGIIETSFSPKKYSLELC 664

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           S VY KEW+FDQ+ALP DLIRR  M  ED
Sbjct: 665 SVVYGKEWRFDQEALPADLIRR-GMAVED 692

[Close]
BLAST of ClCG02G023590 vs. TrEMBL
Match: S4UKZ5_MALDO (Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-10
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 1 

Query: 45  GIIETTFSTAS-HSMELSSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLP-EDFIDQP 104
           GII T    AS H   ++   Y     F  +      I RTNM TED  +   ++F+ +P
Sbjct: 775 GIITTMVWVASGHHAAVNFGQYAYAGYFPSRPT----IARTNMPTEDPSEEDWKNFVRKP 834

Query: 105 ENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPAWAEEPSI 151
           ++ LLQ FP+  Q +T+   + +LS HSPDEEYIG+++E AWAEEP I
Sbjct: 835 DSALLQCFPTQIQATTIMAVLDILSNHSPDEEYIGEKMEQAWAEEPVI 878


HSP 2 Score: 131.7 bits (330), Expect = 7.3e-28
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IATNRQLS +HPIYRLLHPHFRY M IN+ ARESLINAGGIIET+FS   +S+EL 
Sbjct: 605 EPYIIATNRQLSVMHPIYRLLHPHFRYTMEINSLARESLINAGGIIETSFSPKKYSLELC 664

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           S  Y KEW+FDQ+ALP DLIRR  M  ED
Sbjct: 665 SVAYGKEWRFDQEALPADLIRR-GMAVED 692

[Close]
BLAST of ClCG02G023590 vs. TrEMBL
Match: S4UKU6_MALDO (Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-10
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 1 

Query: 45  GIIETTFSTAS-HSMELSSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLP-EDFIDQP 104
           GII T    AS H   ++   Y     F  +      I RTNM TED  +   ++F+ +P
Sbjct: 775 GIITTMVWVASGHHAAVNFGQYAYAGYFPSRPT----IARTNMPTEDPSEEDWKNFVRKP 834

Query: 105 ENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPAWAEEPSI 151
           ++ LLQ FP+  Q +T+   + +LS HSPDEEYIG+++E AWAEEP I
Sbjct: 835 DSALLQCFPTQIQATTIMAVLDILSNHSPDEEYIGEKMEQAWAEEPVI 878


HSP 2 Score: 130.2 bits (326), Expect = 2.1e-27
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IA NRQLS +HPIYRLLHPHFRY M INA ARESLINAGG+IE++FS A +SMELS
Sbjct: 456 EPYIIAANRQLSAMHPIYRLLHPHFRYTMEINALARESLINAGGVIESSFSPAKYSMELS 515

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           S+ Y + W+FD QALP DLIRR  M  ED
Sbjct: 516 SAAYDQLWRFDMQALPADLIRR-GMAVED 543

[Close]
BLAST of ClCG02G023590 vs. TrEMBL
Match: M5X8A3_PRUPE (Lipoxygenase OS=Prunus persica GN=PRUPE_ppa001631mg PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-08
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1 

Query: 81  IRRTNMLTED-FPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDE 140
           I RTNM TE+   +  ++F+ +PE  LL  FPS  Q +TV   + +LS HSPDEEY+G++
Sbjct: 659 IARTNMPTENPSEEFFKNFLKRPEMALLMCFPSQIQATTVMAVLDVLSNHSPDEEYVGEK 718

Query: 141 IEPAWAEEPSI 151
           +E +WAE P I
Sbjct: 719 LESSWAENPVI 729


HSP 2 Score: 129.0 bits (323), Expect = 4.7e-27
Identity = 63/89 (70.79%), Postives = 72/89 (80.90%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IAT+RQLS +HPIYR LHPHFRY M INA ARESLINAGGIIE++FS   +S+ELS
Sbjct: 614 EPYIIATSRQLSVMHPIYRFLHPHFRYTMEINALARESLINAGGIIESSFSPGKYSLELS 673

Query: 62  SSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           +  Y KEW+FDQ+ALP DLIRR  M  ED
Sbjct: 674 AVAYGKEWRFDQEALPADLIRR-GMAVED 701

[Close]
BLAST of ClCG02G023590 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-28
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPY IATNRQLST+HP+Y+LLHPH RY + INA AR+SLIN GGIIE+ F+   ++MEL
Sbjct: 583 MEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMEL 642

Query: 61  SSSVYKKEWQFDQQALPEDLIRRTNMLTED 91
           SS+ YK  W+FD + LP DL+RR  M  ED
Sbjct: 643 SSAAYKSMWRFDMEGLPADLVRR-GMAEED 671


HSP 2 Score: 34.7 bits (78), Expect = 6.2e-02
Identity = 18/57 (31.58%), Postives = 27/57 (47.37%), Query Frame = 1 

Query: 96  EDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGD--EIEPAWAEEPSI 151
           E F+  P+   L   P+  Q + V      LS HSPDEEY+ +  E++  W ++  +
Sbjct: 801 EMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQV 857

[Close]
BLAST of ClCG02G023590 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-28
Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 1 

Query: 2   EPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMELS 61
           EPY IA NRQLS +HPIYRLLHPHFRY M INA AR+SL+N GGIIET F    +++ELS
Sbjct: 563 EPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELS 622

Query: 62  SSVYKKEWQFDQQALPEDLIRR 84
           S+VY K W+FDQ+ LP DLI+R
Sbjct: 623 SAVYGKLWRFDQEGLPADLIKR 644


HSP 2 Score: 64.7 bits (156), Expect = 5.6e-11
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 1 

Query: 83  RTNMLTED-FPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIE 142
           R  M TED   +  ++F + PE  LL+ +PS  Q + V  T+ LLS HSPDEEYIG++ E
Sbjct: 768 RIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQE 827

Query: 143 PAWAEEPSI 151
            +WA EP I
Sbjct: 828 ASWANEPVI 836

[Close]
BLAST of ClCG02G023590 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-23
Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           +EP+ +A +RQLS +HPI++LL PH RY + INA AR++LI+A G+IE+ F+   + +E+
Sbjct: 593 LEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINAVARQTLISADGVIESCFTAGQYGLEI 652

Query: 61  SSSVYKKEWQFDQQALPEDLIRR------------TNMLTEDFP 93
           SS+ YK +W+FD + LP DLIRR              +L ED+P
Sbjct: 653 SSAAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYP 696


HSP 2 Score: 41.6 bits (96), Expect = 5.0e-04
Identity = 20/54 (37.04%), Postives = 27/54 (50.00%), Query Frame = 1 

Query: 98  FIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPA-WAEEPSI 151
           FI+ P+       PS+ Q +     +  LS HSPDEEYIG+  +P+ W  +  I
Sbjct: 813 FIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEI 866

[Close]
BLAST of ClCG02G023590 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 104.0 bits (258), Expect = 8.3e-23
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           +EP+ IATNRQLS LHP+++LL PHFR  M INA AR+ LIN GGI E T   + ++ME+
Sbjct: 527 IEPFVIATNRQLSVLHPVFKLLEPHFRDTMNINALARQILINGGGIFEITVFPSKYAMEM 586

Query: 61  SSSVYKKEWQFDQQALPEDLIRRTNMLTEDFPQLP 96
           SS +YK  W F  QALP +L +R  M  ED P+ P
Sbjct: 587 SSFIYKNHWTFPDQALPAELKKR-GMAVED-PEAP 619


HSP 2 Score: 32.0 bits (71), Expect = 4.0e-01
Identity = 20/67 (29.85%), Postives = 29/67 (43.28%), Query Frame = 1 

Query: 81  IRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEI 140
           I R  M  E+ P+  E+    P+   L+   +  Q     + + +LS HS DE Y+G   
Sbjct: 731 ISRQYMPKENTPEF-EELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRD 790

Query: 141 EPAWAEE 148
              WA E
Sbjct: 791 SKEWAAE 796

[Close]
BLAST of ClCG02G023590 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           +EP+ +A +RQLS +HPI++LL PH RY + INA AR+SLI+A G+IE  F+  ++ ME+
Sbjct: 586 LEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEM 645

Query: 61  SSSVYKKEWQFDQQALPEDLIRR------------TNMLTEDFP 93
           S++ YK  W+FD + LP DLIRR              +L ED+P
Sbjct: 646 SAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYP 689


HSP 2 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 22/54 (40.74%), Postives = 26/54 (48.15%), Query Frame = 1 

Query: 98  FIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEIEPA-WAEEPSI 151
           FI  PE       PS+ Q S     +  LS HSPDEEYIG+  +P+ W  +  I
Sbjct: 806 FISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEI 859

[Close]
BLAST of ClCG02G023590 vs. NCBI nr
Match: gi|659097677|ref|XP_008449754.1| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 4.0e-35
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIE TFSTAS+SMEL
Sbjct: 495 MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIEGTFSTASYSMEL 554

Query: 61  SSSVYKKEWQFDQQALPEDLIRR 84
           SSSVY+ +W+FD+QA PEDLIRR
Sbjct: 555 SSSVYRDQWRFDEQAFPEDLIRR 577

[Close]
BLAST of ClCG02G023590 vs. NCBI nr
Match: gi|659097677|ref|XP_008449754.1| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 81  IRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEI 140
           I RTN+LTED+ QLPE+FID PEN LLQVFPSVDQ + VTTTMILLSAHSPDEEYIG E+
Sbjct: 700 IARTNILTEDYHQLPEEFIDLPENVLLQVFPSVDQATMVTTTMILLSAHSPDEEYIGVEV 759

Query: 141 EPAWAEEPSI 151
           EPAWA EP+I
Sbjct: 760 EPAWALEPAI 769


HSP 2 Score: 155.2 bits (391), Expect = 8.9e-35
Identity = 73/83 (87.95%), Postives = 82/83 (98.80%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPYAIATNRQLST+HPIYRLLHPHFRYNMRINANARESLINAGGIIE+TFSTAS+S+EL
Sbjct: 496 MEPYAIATNRQLSTVHPIYRLLHPHFRYNMRINANARESLINAGGIIESTFSTASYSVEL 555

Query: 61  SSSVYKKEWQFDQQALPEDLIRR 84
           SSS+Y+ +W+FD+QALPEDLIRR
Sbjct: 556 SSSMYRDQWRFDEQALPEDLIRR 578

[Close]
BLAST of ClCG02G023590 vs. NCBI nr
Match: gi|449448968|ref|XP_004142237.1| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 9.8e-26
Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 1 

Query: 81  IRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEI 140
           I RTN+LTED+ QLPE+FID PENELLQVFPSVDQ S VTTTMILLSAHSPDEEYIGDEI
Sbjct: 701 IARTNILTEDYHQLPEEFIDLPENELLQVFPSVDQASVVTTTMILLSAHSPDEEYIGDEI 760

Query: 141 EPAWAEEPSI 151
           EPAWA EPSI
Sbjct: 761 EPAWALEPSI 770


HSP 2 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPYAIA NRQLST+HPIYRLLHPHFR+NMRINANARESL NAGGIIE+TFS  ++SME 
Sbjct: 498 MEPYAIALNRQLSTMHPIYRLLHPHFRFNMRINANARESLNNAGGIIESTFSVGAYSMEF 557

Query: 61  SSSVYKKEWQFDQQALPEDLIRR 84
           SS VYKKEWQFD QALPEDLIRR
Sbjct: 558 SSLVYKKEWQFDTQALPEDLIRR 580

[Close]
BLAST of ClCG02G023590 vs. NCBI nr
Match: gi|778693083|ref|XP_011653576.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 1 

Query: 81  IRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEI 140
           I RTNM TED+ Q+PE FI+ PE+ +L+ FPS+ Q S V  TM++LSAHSPDEEYI  +I
Sbjct: 702 ITRTNMPTEDYDQIPEAFINNPESVILEAFPSIAQASAVAQTMLILSAHSPDEEYIAKKI 761

Query: 141 EPAWAEEPSI 151
           EPAWAE+P I
Sbjct: 762 EPAWAEDPMI 771


HSP 2 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPYAIA NRQLST+HPIYRLLHPHFR+NMRIN+NARE LINAGGIIE+TFS   +SME 
Sbjct: 497 MEPYAIALNRQLSTMHPIYRLLHPHFRFNMRINSNAREILINAGGIIESTFSAGGYSMEF 556

Query: 61  SSSVYKKEWQFDQQALPEDLIRR 84
           SS VYKKEWQFD QALPEDLIRR
Sbjct: 557 SSLVYKKEWQFDTQALPEDLIRR 579

[Close]
BLAST of ClCG02G023590 vs. NCBI nr
Match: gi|778693086|ref|XP_004142240.2| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-17
Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 1 

Query: 81  IRRTNMLTEDFPQLPEDFIDQPENELLQVFPSVDQVSTVTTTMILLSAHSPDEEYIGDEI 140
           I RTNM TED+ Q+PE FI+ PE+ +L+ FPS+ Q STV  TM++LSAHSPDEE IG +I
Sbjct: 701 ITRTNMPTEDYDQIPEAFINNPESVILEAFPSIAQASTVAQTMLILSAHSPDEEDIGKKI 760

Query: 141 EPAWAEEPSI 151
           EPAWAE+P I
Sbjct: 761 EPAWAEDPMI 770


HSP 2 Score: 145.6 bits (366), Expect = 7.0e-32
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 1 

Query: 1   MEPYAIATNRQLSTLHPIYRLLHPHFRYNMRINANARESLINAGGIIETTFSTASHSMEL 60
           MEPYAIATNRQLST+HPIYRLLHPHFRYNMRINANAR++LINAGGIIE TFS AS+S+EL
Sbjct: 265 MEPYAIATNRQLSTMHPIYRLLHPHFRYNMRINANARKNLINAGGIIERTFSAASYSVEL 324

Query: 61  SSSVYKKEWQFDQQALPEDLIRR 84
           SSS Y KEW+FD+QALPEDLI R
Sbjct: 325 SSSAY-KEWRFDKQALPEDLIHR 346

The following BLAST results are available for this feature:
BLAST of ClCG02G023590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX23_HORVU8.0e-2847.97Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1[more]
LOX6_ARATH1.8e-2763.33Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=2 SV=1[more]
LOX2_ARATH4.0e-2768.29Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1[more]
LOX22_HORVU6.8e-2755.17Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1[more]
LOX21_HORVU1.2e-2653.91Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1[more]
BLAST of ClCG02G023590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B2QKD1_GLYSO6.0e-3048.99Lipoxygenase OS=Glycine soja GN=glysoja_008788 PE=3 SV=1[more]
S4UKZ5_MALDO2.5e-2874.16Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1[more]
S4UKZ5_MALDO4.0e-1041.67Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1[more]
S4UKU6_MALDO4.0e-1041.67Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1[more]
M5X8A3_PRUPE1.7e-0847.89Lipoxygenase OS=Prunus persica GN=PRUPE_ppa001631mg PE=3 SV=1[more]
BLAST of ClCG02G023590 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67560.11.0e-2863.33 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT3G45140.12.2e-2868.29 lipoxygenase 2[more]
AT1G72520.16.3e-2345.19 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G55020.18.3e-2354.74 lipoxygenase 1[more]
AT1G17420.11.1e-2246.15 lipoxygenase 3[more]
BLAST of ClCG02G023590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097677|ref|XP_008449754.1|4.0e-3590.36PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo][more]
gi|659097677|ref|XP_008449754.1|6.0e-2380.00PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo][more]
gi|449448968|ref|XP_004142237.1|9.8e-2687.14PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus][more]
gi|778693083|ref|XP_011653576.1|2.9e-1762.86PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus][more]
gi|778693086|ref|XP_004142240.2|2.2e-1764.29PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
IPR020834LipOase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G023590.1ClCG02G023590.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 1..150
score: 1.5
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 86..149
score: 1.2E-8coord: 1..84
score: 1.2
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..150
score: 43
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 1..148
score: 4.32
IPR020834Lipoxygenase, conserved sitePROSITEPS00081LIPOXYGENASE_2coord: 15..25
scor
NoneNo IPR availableGENE3DG3DSA:1.20.245.10coord: 96..148
score: 5.5E-5coord: 1..84
score: 1.7
NoneNo IPR availablePANTHERPTHR11771:SF42PROTEIN C13C4.7coord: 1..150
score: 1.5