ClCG02G012580 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G012580
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 26095156 .. 26095494 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGTCCTCAACAAAGTTTGCTCTCTTGCTCTTGATGTTGTTCATTGCTTCTGGTATATAAATCAATTTTCATTAATTATATTTATTATTTTTTCCCTTTTCCTAATAGTTTTCTTGTTGTATGACGATTAACAATTAAAATATTTCAGAAACATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCGGGATCTGAAAAGAAATTTCTCAACAAAGTCTTACCTGAATATTCTGGAGAAGAAAAGACAACTCCTTGA

mRNA sequence

ATGGAGAAGTCCTCAACAAAGTTTGCTCTCTTGCTCTTGATGTTGTTCATTGCTTCTGAAACATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCGGGATCTGAAAAGAAATTTCTCAACAAAGTCTTACCTGAATATTCTGGAGAAGAAAAGACAACTCCTTGA

Coding sequence (CDS)

ATGGAGAAGTCCTCAACAAAGTTTGCTCTCTTGCTCTTGATGTTGTTCATTGCTTCTGAAACATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCGGGATCTGAAAAGAAATTTCTCAACAAAGTCTTACCTGAATATTCTGGAGAAGAAAAGACAACTCCTTGA

Protein sequence

MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPGSEKKFLNKVLPEYSGEEKTTP
Homology
[Close]
BLAST of ClCG02G012580 vs. TrEMBL
Match: A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-27
Identity = 64/80 (80.00%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP-G 60
          M KSSTK ALLLLM FI SET FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHP G
Sbjct: 1  MVKSSTKLALLLLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLNKVLPEYSGEEKTT 80
           EKKFL+   PE+  EEKTT
Sbjct: 61 LEKKFLHNAFPEHLREEKTT 79

[Close]
BLAST of ClCG02G012580 vs. TrEMBL
Match: A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.8e-26
Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP-G 60
          M K  TKFAL  LM+FI SE LFVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFCHP G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLNKVLPEYSGEEK 78
           EKKFL+K  PE   E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of ClCG02G012580 vs. TrEMBL
Match: A0A061GY75_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-06
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP 59
          MEK S K   L  +L  A       +ARN+ N PC +  DC+DP  C+C++NLCFCHP
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARNI-NTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]
BLAST of ClCG02G012580 vs. NCBI nr
Match: gi|700206874|gb|KGN61993.1| (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-27
Identity = 64/80 (80.00%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP-G 60
          M KSSTK ALLLLM FI SET FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHP G
Sbjct: 1  MVKSSTKLALLLLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLNKVLPEYSGEEKTT 80
           EKKFL+   PE+  EEKTT
Sbjct: 61 LEKKFLHNAFPEHLREEKTT 79

[Close]
BLAST of ClCG02G012580 vs. NCBI nr
Match: gi|700206838|gb|KGN61957.1| (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 6.8e-26
Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP-G 60
          M K  TKFAL  LM+FI SE LFVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFCHP G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLNKVLPEYSGEEK 78
           EKKFL+K  PE   E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of ClCG02G012580 vs. NCBI nr
Match: gi|590581831|ref|XP_007014455.1| (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 58.2 bits (139), Expect = 7.9e-06
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1 

Query: 1  MEKSSTKFALLLLMLFIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHP 59
          MEK S K   L  +L  A       +ARN+ N PC +  DC+DP  C+C++NLCFCHP
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARNI-NTPCNTVKDCADPIKCECRINLCFCHP 57

The following BLAST results are available for this feature:
BLAST of ClCG02G012580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJR0_CUCSA1.5e-2780.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG3_CUCSA4.8e-2675.64Uncharacterized protein OS=Cucumis sativus GN=Csa_2G276990 PE=4 SV=1[more]
A0A061GY75_THECC5.5e-0646.55Uncharacterized protein OS=Theobroma cacao GN=TCM_039540 PE=4 SV=1[more]
BLAST of ClCG02G012580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206874|gb|KGN61993.1|2.1e-2780.00hypothetical protein Csa_2G285280 [Cucumis sativus][more]
gi|700206838|gb|KGN61957.1|6.8e-2675.64hypothetical protein Csa_2G276990 [Cucumis sativus][more]
gi|590581831|ref|XP_007014455.1|7.9e-0646.55Uncharacterized protein TCM_039540 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G012580.1ClCG02G012580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G012580Csa2G285280Cucumber (Chinese Long) v2cuwcgB119
ClCG02G012580Csa2G276990Cucumber (Chinese Long) v2cuwcgB125
ClCG02G012580MELO3C034681.2Melon (DHL92) v3.6.1medwcgB102
ClCG02G012580CsaV3_2G016690Cucumber (Chinese Long) v3cucwcgB134
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G012580Cucurbita maxima (Rimu)cmawcgB500
ClCG02G012580Cucurbita maxima (Rimu)cmawcgB533
ClCG02G012580Cucurbita maxima (Rimu)cmawcgB552
ClCG02G012580Cucurbita maxima (Rimu)cmawcgB755
ClCG02G012580Cucurbita moschata (Rifu)cmowcgB489
ClCG02G012580Cucurbita moschata (Rifu)cmowcgB578
ClCG02G012580Cucurbita moschata (Rifu)cmowcgB532
ClCG02G012580Cucurbita moschata (Rifu)cmowcgB549
ClCG02G012580Cucurbita moschata (Rifu)cmowcgB756
ClCG02G012580Wild cucumber (PI 183967)cpiwcgB125
ClCG02G012580Wild cucumber (PI 183967)cpiwcgB476
ClCG02G012580Melon (DHL92) v3.5.1mewcgB106
ClCG02G012580Watermelon (97103) v1wcgwmB197
ClCG02G012580Cucurbita pepo (Zucchini)cpewcgB429
ClCG02G012580Cucurbita pepo (Zucchini)cpewcgB655
ClCG02G012580Bottle gourd (USVL1VR-Ls)lsiwcgB045
ClCG02G012580Bottle gourd (USVL1VR-Ls)lsiwcgB129
ClCG02G012580Cucumber (Gy14) v2cgybwcgB115
ClCG02G012580Cucumber (Gy14) v2cgybwcgB418
ClCG02G012580Silver-seed gourdcarwcgB1034
ClCG02G012580Cucumber (Chinese Long) v3cucwcgB477
ClCG02G012580Watermelon (97103) v2wcgwmbB132
ClCG02G012580Watermelon (97103) v2wcgwmbB138
ClCG02G012580Wax gourdwcgwgoB304
ClCG02G012580Watermelon (Charleston Gray)wcgwcgB089
ClCG02G012580Cucumber (Gy14) v1cgywcgB136
ClCG02G012580Cucumber (Gy14) v1cgywcgB629