ClCG02G005630 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTGGATCCGACCGTCGTTCCGGCATCGCCGGAGCCTGATGACGACAAGTTGACTCAGTGGACCAACCAATGGCCGGAATATCCACCGGAATTCAGGTAGGTCTCACTGTCAAATTGTTAAGTTTTGGGTACTGATATTTGAATTTACTTCAAAACGGCCATATTGGAAAAAAGAAATCAAATTATCAAATCAACCATATAAATTCATTATATTAAATTTCAAAATGGTCATATTAAAAAAGAAAAAAAAAGTGTTTTAGGAATAAAGTGATGAAAGTGAAATGAAAGTGAGATGTAGAAAAAATGGGCAAATATTGTTATAAGAAAAAAAGTCAAATCCCAAAAGTACTTAGAATCTATTCCCAAAAAAACAAAAAAACATGTGCAAATCTAGTAGTGGTGTGGATCACAAACATTGTTTCATATGTATGAATATCAAATGTTTGCATTTTAAATGTATTAAATAACTAATGTTTGTGTTTGAATATGAAGAATAATTAAAGTCTAAAAGTTAAATATCTATGTCAAATTTACCAATTTTGTATATAAAAATCGAAATTAAATAATTATTTAACTAAATGTAAGAGAACAAGTAATGTCTTCATAGATTAATTTAGCATTATTTTAACATATAAATATTAATTAATTATTTAATCTCTTAATATATAAATAAATGAATATTTTTATATTAAACATCAATTAAACATTACATAAATTATTTAGTTTAATTAAAAAATAATTAAATTAATGTAAAATTAGTAGTTAATAATAAAATTTTATATTAAATAGCTAAGATAAAATAAAATATTAATTGCAAATGTATTAATTAAAAAGTAGGGTTGTTTTCAAATATAGGACAAATATAGCAAAATTTCATTATCCACGAATAGATAGTAGTCTATTGCCATCTATCACACATAGATGGCAATGAGATTTTGCTATTATTTGTAAATATTTTTAGTAGTTTTGTCATTTGAAATAATTTCTCTAAAAATGATTAAGTCTAAATAATATACTTATTTTAATAATAATTATAATTAATGATTAATTAATTAGACTATATTTTTACTCTCTTGGGTATAAAAATTCCACTTGTATCGAGGATATTAGAAAATTCAAGTAAAATGGATTTTAAAGTTCCCTAGACAATAATATTCTAGATTTAAAAAGTGAAATTGTGTGAAATTTATAAAGGTTATTAAAGTCTCTCTGAAATCCATGGCAAAACCTATGTAACAAATAGACACTTTATTTTATTTAATAAAAATTATAAATCAAATTACTTTGGTTTTCAAGTTTTTTTAAAAAAATAAAACAGAAAAAAATACTTTAGAAAGTCTAAAATTCTAAACGGTGAATTAAAGTTGATTATTAATTGACTAATATTGAATTGGTAGAAATACTGTTTTGGTTCTTACACTTTGAAGTTTGTTCAATTTTAGTCCATACACTTTTAAATGTTCAATTTTTGTTCCTATACTTTTACAAGATCTTAAATTTAGTGTCCCTATGATTTGCTTATTGTTGATTTTTTTTTTTTCTTCTTTGTTATTTATTAGGAGTTTTACTACAAATTTTGAAAACGTATTCACATATCCTTGCATGAAAATTATAGTTATTGTTTAGCGAATTTTAATCATAATTAACTATGAGGACTAAATTTAAAATTTATTAAAAGTACAAGAATTAAAATTAGACAAACATCAAAGTAGAAACTAAAATGATATTTCAACCAATTAGATAGAATAGCAACCTTGATGTGGTAATTATTACGAATTTTATATGAATTTATCTAATGTCGCAATGTTTTTGTTTTTGTATTTGTATTTCCTCCTTTCAACTTTCTCTCTCAGTTCCCCTAACCCATATCCTTTATCTCTAATGGCATACACCATATCGACCATATCCATAAGAGTGAGAGAAAAAACTGAACAAATAAATAAAAATAAAATCGAACTGAACTGGATGATCCACTTGTTTGGTTTGATTTTTTAATTAATGTAAGATTAAAAACAAATCAAACCAATTATATATATATATATATATATGAACAAACTAGAAGAACCAGGGGGAGGAGAAATGACAGTGCGCAACCCTAAGCTTGACGTGGGGTGGGTTGAGCCTGGCAATGGAGAGCCAAACCCCATGGGACAAGGCACCATCATAGGCAAGACGACCAGACGGTAACATTGCTACAAAGGTCAGGAGGCTACACAAAACCTTGACGAAGACTTATCAAGTTAACTCGACCTCCCACGTGTTTTCTAGCAACCATGCGACAATAACCCGATTCATAGCCAGAATGGAAGCCATGACAAGGGCAACTTCCTACTAACACGAAGGTAGAGAAGCTACAAACCCAACGCTTGTGCAAGACCCGAGAAATGGTTAGGCGAAGTCCTAGAGAACGTTCAAGACTGCTTTTCCAAAAGCACTAGCCAAGTAGGAGGAATCGATTTGGAGAACACCTGAGCAGTAAAGCCGCTGCTCGACACGAATAGAAAAAAGTTGCACCATCCAAATCACCAACGGGGTAAGTCAGCAAGTTGACGAATCAAACCTAGAAAAGGGTCTTCGACTACAAGAAGTAGAGGCCAAAATGGCCAGAAAAGGCGACACACCATTGGGCGTGTGGAGCTCCCCAAAGAACTGCTTAAAAATGACAGAGCCCTCTTCACGGACGACATCATGCCAGAAGACCCCTCCTCGAGAGCTTCAAGCTTCCCACCATCGAGGAATATTGATTGACCAAAAGTGTACTAGTGATAACGAATATAGATAAAGGTGGTCTAAGTGCAAACATACACTATCGGTGAAGTAATAAATCTTGGAGTATTCCAAGAATCAAATCCCACGAGACTAGCTATCTAATTAAGTTTGTTTTAAACAAAGTGACCTAAAATAACCAAAATAAACTAAAGTGTGTTGGATTGAATGATGTTTAAAGAATAAAGACAATCAATGGTAGAACTAGAGATGCAACTATGTTTCAACTAAAAATTATTATGCTTTGAGCGATGAGGCCGCATCATACTAGTGCATTGATTTACTCATGAATAGAATCTTCTCCTACTTAGTTTTGTATCAAGTTCTTTTAGGAGCTAAGTAACTAATACTATATTTTTATGGTTAGCTAGATCTCAGATGAATTGCAGTACGTATTCTCTATCATATGGTGCACCTTATGTGACATAAGATGCATGACAATCCTATTTTTAGGCTTTAACAGCCATATTCCCTTGTGAAATCTGTTTACACTATAATCTTTTCAACATTAGGACTCCACTACATTGCTAATTTAAGTGGCCAGTTTAAATTAACAATATTTTCCCATACAATCAACAAAGAAAATGTGCAAGTAAAGCAAGGTATGATACTTTAACAAATGTTCAAGCCATAAATCCCTAGGGTATCCACATAGTTGAACCCCTTATTAAAATTAACTCATGATTAAGAATAAATGAATTGATTTCATTGCTACCATAATCATAGTTACAATGTAGATGTTCAAAGAATGCAGCTATCAAGTAGAAAAGAGAAAAGTAAATGCTTGGAAATACAATAAATACCCTACCTGGATGGGTTCCTCACTTTCTCGAGCTTCCTAGGTTGGATTCTCCTTTCTCAAGGATGAATCCTCACTCTTTACACTCATTTTCACGGGGTAGGTAAGTCTTAATTTTAATTTCCCTAGAGGAAGTTTCTTCTTGGAGAGCTTCTAGAATTTTGAGTGTGAGATTTACCTGGAGGGTCTGAATTTCGTAATGGATATGATTTTTCCTTAAGGCATCAAAGGAGTTAGGTAGGGCCGATTTTCATGTTTTTGGTGCTCCCCAGTCAAATTCGGAGATGAAGAGTGGCTGAAAACTTGGTACTTCGCAACTACAAACGACTGGGCAAGACTTCTGGAAATTAGGGTTTTGATACAGCTGCATCAAGTTTTGGCGATGCGGGCAAATCACAATCAATTTCTACAAAATAGCCAAAAATCAATGTAAATGCACCTAAAATAGGCCTAAACTAATAGAAATACACTTAAGCAATCAAAACACCTATACTTAACCATTTTAACATGCAAAAGACCATTTTTGTTAAGAAAAGATATTAAAATAAAACTTTAAAACATGCATTTCATGACATATATCAAATATGCGAGAAGCACTGACTCGATCAAGCACGTTGAGACATATCGTTCAAACATGGAGTTGGACAAGGTATTAAAGTCTGCCTTTCAAAATTTTGCCCAAACTCAAGTCTCACATGCTAAAACTAAAAGTAGATTTTGCCCAAAAATCTAAATACAACATATTGAAAATATCAGTACTTTTTTTTAGATAAATATCCAATGCAATTTAGAAGAACCTCATGCCTAATAAAATAATCTATGGTATCACATCATTGATAAAAATGTCGAAATTTTGAATCTCCAACCTCCACGTGTTGTTGATCTTAAAAAAAAAATTTCTAAATTTCTAAATTAAATTATAAATTTAAATTATGGATTCCATTTAGTAGTTATAGTTTTAGAAATTTTGTAATAAGTTTGTGTAAGGATTTTTGTAGAATAGTGTTATTTTGTTATTTAACAAATGTGAGGTTAATTTACTAAAATGAGTATAGCTAACAAACATAGAATTTGTACTATCAAACTGATAATATATAGTTAATTTTGTAAATTTAATATCTATGCCACTAATAATTATTTGAATTCCATTGAAAATCAATATTTTTATTCTTAAACAATACAATCATGACTTGCAATTATTAAACTAAACAAAATTTAACTAACAGAGACTTATTGTAAAAAAAAAAAAACACATACTAAAATAGGATGAAACATAGACAACTTATAATTTAACCTATTTCGAGATTAAACTATTTTGAGATTAACATGAGAGTTAGCAGGGAGACTTGCAAGGAATATGTTGACGAATTGGAGAAACTTGGCTACAAATTGATGGAACTGATCGGCGTTAGCTTGGGATTACCGGCGGGAAGGTTTCGAGTTGGCTCTTGGCATCGGCCACCACAAGGACTCTGGCGTCTTGATAGTGCTCGCCCAAGACGACGTCGGAGGGCTTGAAGTGAAAAGGAAGAGAGATGGAGAGTGGGTTCCAATCAAACAACCCATATCCGATTCTTACGTTGTGAATGACGGAGATATTACTCATGTATGTAGCAATACTATCGTATATATGATGCCTTATTCACTAGATCATGCTCAAATTAACTTTCCTAGAAGCACTACAAATCAATTGTTCTTTTTAAGAACTTTTGAAAGCACTCTTCTACGAATGTTGAAAACATTCAAGTCTTTCACCTTGAACGAGTGA ATGGTGGTGGATCCGACCGTCGTTCCGGCATCGCCGGAGCCTGATGACGACAAGTTGACTCAGTGGACCAACCAATGGCCGGAATATCCACCGGAATTCAGGGAGACTTGCAAGGAATATGTTGACGAATTGGAGAAACTTGGCTACAAATTGATGGAACTGATCGGCGTTAGCTTGGGATTACCGGCGGGAAGGTTTCGAGTTGGCTCTTGGCATCGGCCACCACAAGGACTCTGGCTGCTCGCCCAAGACGACGTCGGAGGGCTTGAAGTGAAAAGGAAGAGAGATGGAGAGTGGGTTCCAATCAAACAACCCATATCCGATTCTTACGTTGTGAATGACGGAGATATTACTCATGTATGTAGCAATACTATCGTATATATGATGCCTTATTCACTAGATCATGCTCAAATTAACTTTCCTAGAAGCACTACAAATCAATTGTTCTTTTTAAGAACTTTTGAAAGCACTCTTCTACGAATGTTGAAAACATTCAAGTCTTTCACCTTGAACGAGTGA ATGGTGGTGGATCCGACCGTCGTTCCGGCATCGCCGGAGCCTGATGACGACAAGTTGACTCAGTGGACCAACCAATGGCCGGAATATCCACCGGAATTCAGGGAGACTTGCAAGGAATATGTTGACGAATTGGAGAAACTTGGCTACAAATTGATGGAACTGATCGGCGTTAGCTTGGGATTACCGGCGGGAAGGTTTCGAGTTGGCTCTTGGCATCGGCCACCACAAGGACTCTGGCTGCTCGCCCAAGACGACGTCGGAGGGCTTGAAGTGAAAAGGAAGAGAGATGGAGAGTGGGTTCCAATCAAACAACCCATATCCGATTCTTACGTTGTGAATGACGGAGATATTACTCATGTATGTAGCAATACTATCGTATATATGATGCCTTATTCACTAGATCATGCTCAAATTAACTTTCCTAGAAGCACTACAAATCAATTGTTCTTTTTAAGAACTTTTGAAAGCACTCTTCTACGAATGTTGAAAACATTCAAGTCTTTCACCTTGAACGAGTGA MVVDPTVVPASPEPDDDKLTQWTNQWPEYPPEFRETCKEYVDELEKLGYKLMELIGVSLGLPAGRFRVGSWHRPPQGLWLLAQDDVGGLEVKRKRDGEWVPIKQPISDSYVVNDGDITHVCSNTIVYMMPYSLDHAQINFPRSTTNQLFFLRTFESTLLRMLKTFKSFTLNE
BLAST of ClCG02G005630 vs. Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.3e-12 Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 1
BLAST of ClCG02G005630 vs. Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 49/159 (30.82%), Postives = 71/159 (44.65%), Query Frame = 1
BLAST of ClCG02G005630 vs. Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 49/159 (30.82%), Postives = 71/159 (44.65%), Query Frame = 1
BLAST of ClCG02G005630 vs. Swiss-Prot
Match: DMR6_ARATH (Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana GN=DMR6 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07 Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 1
BLAST of ClCG02G005630 vs. Swiss-Prot
Match: ACCO5_ARATH (1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07 Identity = 45/142 (31.69%), Postives = 62/142 (43.66%), Query Frame = 1
BLAST of ClCG02G005630 vs. TrEMBL
Match: A0A0A0K3A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074960 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40 Identity = 97/189 (51.32%), Postives = 122/189 (64.55%), Query Frame = 1
BLAST of ClCG02G005630 vs. TrEMBL
Match: K7ZTB8_CUCSA (Gibberellin 20-oxidase (Fragment) OS=Cucumis sativus GN=ga20ox2 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35 Identity = 93/189 (49.21%), Postives = 116/189 (61.38%), Query Frame = 1
BLAST of ClCG02G005630 vs. TrEMBL
Match: A0A0A0K6P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074950 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35 Identity = 93/189 (49.21%), Postives = 116/189 (61.38%), Query Frame = 1
BLAST of ClCG02G005630 vs. TrEMBL
Match: A0A061E0N9_THECC (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Theobroma cacao GN=TCM_006983 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.8e-31 Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of ClCG02G005630 vs. TrEMBL
Match: A0A0D2Q636_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G006800 PE=3 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.2e-31 Identity = 66/125 (52.80%), Postives = 92/125 (73.60%), Query Frame = 1
BLAST of ClCG02G005630 vs. TAIR10
Match: AT3G19000.1 (AT3G19000.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28 Identity = 63/146 (43.15%), Postives = 85/146 (58.22%), Query Frame = 1
BLAST of ClCG02G005630 vs. TAIR10
Match: AT3G19010.1 (AT3G19010.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22 Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = 1
BLAST of ClCG02G005630 vs. TAIR10
Match: AT5G05600.1 (AT5G05600.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09 Identity = 40/129 (31.01%), Postives = 61/129 (47.29%), Query Frame = 1
BLAST of ClCG02G005630 vs. TAIR10
Match: AT5G24530.1 (AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 1
BLAST of ClCG02G005630 vs. TAIR10
Match: AT1G77330.1 (AT1G77330.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08 Identity = 45/142 (31.69%), Postives = 62/142 (43.66%), Query Frame = 1
BLAST of ClCG02G005630 vs. NCBI nr
Match: gi|778725239|ref|XP_011658922.1| (PREDICTED: gibberellin 20 oxidase 2-like isoform X6 [Cucumis sativus]) HSP 1 Score: 175.3 bits (443), Expect = 9.5e-41 Identity = 98/189 (51.85%), Postives = 123/189 (65.08%), Query Frame = 1
BLAST of ClCG02G005630 vs. NCBI nr
Match: gi|778725230|ref|XP_011658920.1| (PREDICTED: gibberellin 20 oxidase 2-like isoform X3 [Cucumis sativus]) HSP 1 Score: 175.3 bits (443), Expect = 9.5e-41 Identity = 98/189 (51.85%), Postives = 123/189 (65.08%), Query Frame = 1
BLAST of ClCG02G005630 vs. NCBI nr
Match: gi|778725233|ref|XP_004136997.2| (PREDICTED: gibberellin 20 oxidase 1-like isoform X4 [Cucumis sativus]) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40 Identity = 97/189 (51.32%), Postives = 122/189 (64.55%), Query Frame = 1
BLAST of ClCG02G005630 vs. NCBI nr
Match: gi|778725225|ref|XP_004137123.2| (PREDICTED: hyoscyamine 6-dioxygenase-like isoform X1 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39 Identity = 97/189 (51.32%), Postives = 119/189 (62.96%), Query Frame = 1
BLAST of ClCG02G005630 vs. NCBI nr
Match: gi|778725236|ref|XP_011658921.1| (PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase isoform X5 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 5.2e-39 Identity = 98/189 (51.85%), Postives = 119/189 (62.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |