ClCG02G000450 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000450
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	TPR repeats-like protein
Location	CG_Chr02 : 497987 .. 501622 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAAGGCTGAAGTTTTGCCACCAAAACCAACCAACAGCCAAAGCCATGGGTTCTACAACTGCAAGAGTACTGACTCCCCATCTTCTCTTTCCCTCTTCTTCCTCTCCTAATCCTTCAACAAACCCTAATCCCAAATCTTTAAAGCCCTTCTCATTTCCCAACCATAATCCATTACCCACCAGGCGTTTGTTGCTCTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCAATTCCCAGCAATCCGATTCAACCCAGTTCTTGCCGTGCTGTCGAGAGCTTTGACCCTGTCACCCGTTCCGAGCGAGAAGCGAGTGCCGCCATTTCCCGAAGAGTATCTGAAGCTGTGGAGCTTCTCGATAAAGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTCAGGTTCCCACTAACTTTCCATCTTCGAATTCGTATTTTTAACGCCAAGTCCTGATTTGGCCAATTATTTAAACAATGATCAGTTTGATAATTGATGCTTAGCTGAAGTTTCCATTCTTCAGACCCCTAATCTTAGATATAAAGTTCTTATGATAGACATCGTGAAATCAGATAGCAAATGCCTTTCTTCCAAAATCAAATCAACAGAAAATATTAGTCTTAAGAAAAATTAATATGCTCCGGTATGTTGTTAGCTTATTTTATTGTATCTTTCATTCTCAAATATATGCATATTAAACTAATAACAGCGACATGGAGAGAAATTGAACAAAGGATGTTAACAGAAAAATCTTTTAGGAAATCCTGCAGGATCTGGTGCATAAAGTAAGGTACATGCACTACTGAATTTTTCTTATGTTTGAGTGCAGTCAAAGTCCTACATTGACTAAATAAGGGAAACATCTGATAGTATATAAGTAAGGACAACTATCTCCAATGGTACAAGGCCTTTTGGGTGAAACTAAAAACAAAGTCATGAGGGTTTATGCTCAAAGTGGACAATATCATACCATTTTGCAGATATGTTGGAGCGTTTGCTGTCTCTAACACTTTGACTTTCTGGATAATAGCCCGGTGTATTTTGGCCATCCATTGGGATGTTCTCAATCTTTTGCACCCATTTTCATCGTGATCATGTGATTTACCTAGTTTGAATTTTCAAGGCTTAAACATTACTGGTAGGTTTTCAGCTGAATGGATTAAACCATTTCTTACAAAATGTCAAAAACACAAACATTTGTGGAAAGGGTATTTATCTTCATATTTGTTTTCAGAAAGTTGTAGTTAAGGAATTTCAACTCAAGAGGATTTCAACTCAATTTGGATAATCCATGTAGTTTGCTTATTGTGAGATAGCTGTCGCTGTGGCCTATGGATATATGAATTGGTTTTTGAGCCTCAAAATGTACTTGTATAAGTCAATTGGAGGCCTAAATATGGAGAGAGTCTTCGAGGTAGCAAAATGATGCATGTTAATTTTGATTTATTGATGACATATTTGGAAATGTCTCTTGAAGGCAGTTCTATGAATGCCGTTTTGGAAGCCGATCGAACATATATAATTTTGAAAAGAGTAACCAAATGAACTCATTTGGGGGTGGTAAGTTAGATCCATGTGCACTAATTATGAGTCACTTAACTGAACACCACAATTTTGTCACTATCCAGATAGAAGCATGACAAAATTAAAGTTTTGCATTTTTAATTCCGTGGTGGATCATTATAATACTGATCTTCAGGAATTTTCACTGCTTCAGTTTGGATTTGATGTGGGCTTCAAAACATGCAACATGAAATTACTTTCTGAATTCTAAACACCCGTCTCGCATAGACTATAATCCTATAGCCTCTAAGATGCAGAAATCTTAGAATATATAAATTCTGAGTGTTGTTCTAAGAATCAAATAGGAGGCAGCAAAACTTTGATTCTAAAAGTTCTTTTTCTGAAGAAAACTCAATACGAAGAGGGTTTAGCATGTGACGAGAAGGCTTTAGAGTCCTTTCCCTTTGAAGCTCATCTTCAATCTGCATTCCTCATTTTATTGAGAGAAAGTTAACTACATGTCAAGTCAACGTATTTTGACTTTTAGTTCTTATTAAAAATTTGATATTAGTTCTTGTCTAATTTCAGGTAATTGATAAATATAAAGATTTTGCTTTCTCGGACTATGCCCGAGTAGGCAGAGCGTTGGCCCTGTACGAAATTGGTGACCGAGAAGAAGCCATTGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATATCCAGGTACTTAAATAGATTTTGAACAAATTTTGGATTCTAGACCTACAGTTTGAAGAGGCTATGACGTAGATGCAGTGATACAACAGTTTTAGCTTAGAGGAAGAAACTTTATCATACAGTGTACAAGTAATTGAGAATATATGTATATATTTTAAATAATTCTTCAAACAATTTTCATGAGGTAAAAGTTTGGTTAAATTATAAGTTTAGATCATAAACTATGAGGTTTGTGTTTATTTGGTCCTCCAACTATCAAAATTGTTCTTAAACTTTCATTACGAAGAATTCAAAATTCTTAAAAATTAATTGATCTGTTAGATATTAAACATCAAAATTTTGTGTCCGATGGATTTTAAATTTTTAAAAAGTTTTAGGGATTAAATTTGTAATTTTGAAAATATAGGAACCAATTTTGAGGATGAAATTTTTAATTTAACTGAAACTTTTTAATAATTTATTCAATTTAAAGGTCAAAACTACAACTAAGTTTGAGGTTAATAGGACAAATGTAAGAGTTTAATGTGAAAATTAATATGTATTGTTTAGAGCTAAAAGTAGATTGTTCCCCTATATCTATCAAATAGATGACTAAGGCTATGATGGCATAACTGAATCATGCCAAGGAGCATGGATGCGACACAAACAACTACAGAAATGAGACATGGATATGATATAGACATAATAAATATCATTTTCTAAAGATCAAGAGTATGGACATGACAAGATCACAGTTTTAGAAAATATATAATTTTTATACCAGAAAAAAAAAATTCAAAATCAATAAATTTATACACTATTCACAAAATTTATTATTTTTATTTTATATAACTAACTATTTGTGTCTATTTAAAATATTCAACAAGTGTCTGATACATGTCTAACAAATATGTCTAACAAATATTGACTAATAATTATAGTTACAAGTGTTTGATACTTGAATTCTCTCTATCTTTCCCGCTGTTGGGGTTGGTAAGTTTTGTAAAACATCATTAAATGTAGATTGAAATTCTGACTGCTCTCCCTAAGCTATGTTGGGGAAGCCACCTAGAATCTAAAAAATCATACTGTTACACAGTATTACTCGACAGTTGAAATTAATAATATTTATTCCTTGGTGTCTCTTCTCTTGTGTTATGTGGGCCATAATGAATGATGTGTAGTACATAGTACTAGCATTGATGTATCGGTGTATTGTTTTGCAGAAGTGCATGCGGCATTGGCTGCAGCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAACCAATTCGCCATTGCAACTTTGCTTGATCCTCATTATGTGGATATCTCATATGTGAAAGAAACAAAGCACTGGCCTCCTAGTTTGATTAGTTCTTTGCAACATTTCTTAACACTTTCTTAG

mRNA sequence

ATGAAAATAAGGCTGAAGTTTTGCCACCAAAACCAACCAACAGCCAAAGCCATGGGTTCTACAACTGCAAGAGTACTGACTCCCCATCTTCTCTTTCCCTCTTCTTCCTCTCCTAATCCTTCAACAAACCCTAATCCCAAATCTTTAAAGCCCTTCTCATTTCCCAACCATAATCCATTACCCACCAGGCGTTTGTTGCTCTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCAATTCCCAGCAATCCGATTCAACCCAGTTCTTGCCGTGCTGTCGAGAGCTTTGACCCTGTCACCCGTTCCGAGCGAGAAGCGAGTGCCGCCATTTCCCGAAGAGTATCTGAAGCTGTGGAGCTTCTCGATAAAGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTCAGGTAATTGATAAATATAAAGATTTTGCTTTCTCGGACTATGCCCGAGTAGGCAGAGCGTTGGCCCTGTACGAAATTGGTGACCGAGAAGAAGCCATTGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATATCCAGAAGTGCATGCGGCATTGGCTGCAGCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAACCAATTCGCCATTGCAACTTTGCTTGATCCTCATTATGTGGATATCTCATATGTGAAAGAAACAAAGCACTGGCCTCCTAGTTTGATTAGTTCTTTGCAACATTTCTTAACACTTTCTTAG

Coding sequence (CDS)

ATGAAAATAAGGCTGAAGTTTTGCCACCAAAACCAACCAACAGCCAAAGCCATGGGTTCTACAACTGCAAGAGTACTGACTCCCCATCTTCTCTTTCCCTCTTCTTCCTCTCCTAATCCTTCAACAAACCCTAATCCCAAATCTTTAAAGCCCTTCTCATTTCCCAACCATAATCCATTACCCACCAGGCGTTTGTTGCTCTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCAATTCCCAGCAATCCGATTCAACCCAGTTCTTGCCGTGCTGTCGAGAGCTTTGACCCTGTCACCCGTTCCGAGCGAGAAGCGAGTGCCGCCATTTCCCGAAGAGTATCTGAAGCTGTGGAGCTTCTCGATAAAGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTCAGGTAATTGATAAATATAAAGATTTTGCTTTCTCGGACTATGCCCGAGTAGGCAGAGCGTTGGCCCTGTACGAAATTGGTGACCGAGAAGAAGCCATTGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATATCCAGAAGTGCATGCGGCATTGGCTGCAGCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAACCAATTCGCCATTGCAACTTTGCTTGATCCTCATTATGTGGATATCTCATATGTGAAAGAAACAAAGCACTGGCCTCCTAGTTTGATTAGTTCTTTGCAACATTTCTTAACACTTTCTTAG

Protein sequence

MKIRLKFCHQNQPTAKAMGSTTARVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAFLLPIPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS

Homology

[Close]

BLAST of ClCG02G000450 vs. TrEMBL
Match: A0A0A0LN32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G334530 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-120
Identity = 229/251 (91.24%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 1   MKIRLKFCHQNQPTAKAMGSTTARVLTPHLLFPSSSSP--NPSTNPNPKSLKPFSFPNHN 60
           MKIRLKFCHQN+PT  AMGSTTAR+L PHLL PSSSS   NPSTN   KS KP SFPNHN
Sbjct: 25  MKIRLKFCHQNKPT--AMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHN 84

Query: 61  PLPTRRLLLFSLPIATAFLLPIPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAV 120
            LPTRRLLLFSLPIATAFLLPIP NPIQPSS  AVESFDPV+RSE++ASAAISRRVSEAV
Sbjct: 85  SLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAV 144

Query: 121 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 180
           ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME
Sbjct: 145 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 204

Query: 181 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSL 240
           DVSISLKGYPEVHAALAAALYVDKHAALLAENQF IATLLDPHYVDISYVKETKHWPPSL
Sbjct: 205 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSL 264

Query: 241 ISSLQHFLTLS 250
           ISSLQHFLTLS
Sbjct: 265 ISSLQHFLTLS 273

[Close]

BLAST of ClCG02G000450 vs. TrEMBL
Match: M5WH51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010783mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-79
Identity = 171/244 (70.08%), Postives = 194/244 (79.51%), Query Frame = 1


Query: 18  MGSTTARVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAFL 77
           MG+  A +  PHLL   SSS   +  PN KSL PFS     PL +RRL+LF+LP+AT FL
Sbjct: 1   MGACKAPI--PHLLMTCSSSL--AQPPNLKSLNPFS---KTPLLSRRLVLFTLPLAT-FL 60

Query: 78  LP-------IPSNPIQ----PS-SCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGR 137
           LP       I SN I     PS S  A+ +FDP++ SER+AS AISRR+S+A+ELL+KGR
Sbjct: 61  LPRKGSCGDISSNSIDVNSTPSGSSSALSNFDPISASERDASDAISRRISDALELLEKGR 120

Query: 138 ELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLK 197
           ELQALGDFNQALL FTQVI+KY DFAFSDYARVGR+L LYE+G+REEAIAEMEDVSISLK
Sbjct: 121 ELQALGDFNQALLCFTQVIEKYDDFAFSDYARVGRSLILYEVGNREEAIAEMEDVSISLK 180

Query: 198 GYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHF 250
           GYPEVHAALAAALY DKHA LLAENQF IATLLDPHY D+SYVKETKHWPPSL+SSL HF
Sbjct: 181 GYPEVHAALAAALYADKHAPLLAENQFTIATLLDPHYTDLSYVKETKHWPPSLVSSLYHF 236

[Close]

BLAST of ClCG02G000450 vs. TrEMBL
Match: V4SX87_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002360mg PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.4e-76
Identity = 157/237 (66.24%), Postives = 185/237 (78.06%), Query Frame = 1


Query: 17  AMGSTTARVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAF 76
           AMG+  A V   HLL   S S     NP    +K    P   PL +RRLL FSLP ++  
Sbjct: 3   AMGAYQAPVC--HLLLSGSQSEAQRRNP----IKTPKTPLQLPLTSRRLLFFSLPFSSLL 62

Query: 77  LLP----IPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGRELQALGD 136
           LLP    I + P   SS     ++DP+T++E++ASAA+S RVS+A+ELL+KGRELQA+GD
Sbjct: 63  LLPNNRKITNKP--SSSDAFAATYDPLTQAEKDASAAVSSRVSDALELLEKGRELQAIGD 122

Query: 137 FNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHA 196
           FN+AL YFT V++ YKDFAFS+YARVGRALALYE+GDREEAIAEMEDVSISLKGYPEVHA
Sbjct: 123 FNKALQYFTLVVENYKDFAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHA 182

Query: 197 ALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS 250
           ALAAALYVDKHA LLAENQF IATLLDPHY D+SYVK+TKHWPPSL+SSL+HF+TLS
Sbjct: 183 ALAAALYVDKHALLLAENQFTIATLLDPHYTDLSYVKDTKHWPPSLVSSLRHFITLS 231

[Close]

BLAST of ClCG02G000450 vs. TrEMBL
Match: A0A067E942_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027087mg PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-75
Identity = 152/225 (67.56%), Postives = 179/225 (79.56%), Query Frame = 1


Query: 29  HLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAFLLP----IPSNP 88
           HLL   S S     NP    +K    P   PL +RRLL FSLP ++  LLP    I + P
Sbjct: 10  HLLLSGSQSEAQRRNP----IKTPKTPLQLPLTSRRLLFFSLPFSSLLLLPNNRKITNKP 69

Query: 89  IQPSSCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQVI 148
              SS     ++DP+T++E++ASAA+S RVS+A+ELL+KGRELQA+GDFN+AL YFT V+
Sbjct: 70  --SSSDAFAATYDPLTQAEKDASAAVSSRVSDALELLEKGRELQAIGDFNKALQYFTLVV 129

Query: 149 DKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA 208
           + YKDFAFS+YARVGRALALYE+GDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA
Sbjct: 130 ENYKDFAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHA 189

Query: 209 ALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS 250
            LLAENQF IATLLDPHY D+SYVK+TKHWPPSL+SSL+HF+TLS
Sbjct: 190 LLLAENQFTIATLLDPHYTDLSYVKDTKHWPPSLVSSLRHFITLS 228

[Close]

BLAST of ClCG02G000450 vs. TrEMBL
Match: A0A067KE93_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12797 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.9e-74
Identity = 155/232 (66.81%), Postives = 185/232 (79.74%), Query Frame = 1


Query: 24  RVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIA---TAFLLPI 83
           + L  +L  PSS S  P+++  PKS       N N    RRL L SLPI    T+  L +
Sbjct: 5   KALISNLQLPSSPSA-PNSHKTPKS------SNTN----RRLFLLSLPICITCTSTTLVL 64

Query: 84  PSNP--IQPSSCRAV-ESFDPVTRSEREASAAISRRVSEAVELLDKGRELQALGDFNQAL 143
           PSN   +Q +S  A+ ES+DP++++E++ S+A+SRR+SEA+E LDKGRELQA GDFN+AL
Sbjct: 65  PSNLSIVQSNSSLALAESYDPISQAEKDTSSAVSRRISEAIEFLDKGRELQAQGDFNKAL 124

Query: 144 LYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAA 203
           LYFT V++ YKDFAFS+YARVGRALALYE+GD+EEAIAEMEDVSISLKGYPEVHAALAAA
Sbjct: 125 LYFTLVVENYKDFAFSEYARVGRALALYEVGDKEEAIAEMEDVSISLKGYPEVHAALAAA 184

Query: 204 LYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS 250
           LYVDKHA LLAENQF IATLLDPHY D+SYVKETKHWPPSL+SSLQ F+TLS
Sbjct: 185 LYVDKHAPLLAENQFTIATLLDPHYTDLSYVKETKHWPPSLVSSLQRFITLS 225

[Close]

BLAST of ClCG02G000450 vs. NCBI nr
Match: gi|778670285|ref|XP_004147349.2| (PREDICTED: uncharacterized protein LOC101214268 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 1.8e-120
Identity = 229/251 (91.24%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 1   MKIRLKFCHQNQPTAKAMGSTTARVLTPHLLFPSSSSP--NPSTNPNPKSLKPFSFPNHN 60
           MKIRLKFCHQN+PT  AMGSTTAR+L PHLL PSSSS   NPSTN   KS KP SFPNHN
Sbjct: 4   MKIRLKFCHQNKPT--AMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHN 63

Query: 61  PLPTRRLLLFSLPIATAFLLPIPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAV 120
            LPTRRLLLFSLPIATAFLLPIP NPIQPSS  AVESFDPV+RSE++ASAAISRRVSEAV
Sbjct: 64  SLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAV 123

Query: 121 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 180
           ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME
Sbjct: 124 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 183

Query: 181 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSL 240
           DVSISLKGYPEVHAALAAALYVDKHAALLAENQF IATLLDPHYVDISYVKETKHWPPSL
Sbjct: 184 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSL 243

Query: 241 ISSLQHFLTLS 250
           ISSLQHFLTLS
Sbjct: 244 ISSLQHFLTLS 252

[Close]

BLAST of ClCG02G000450 vs. NCBI nr
Match: gi|700207083|gb|KGN62202.1| (hypothetical protein Csa_2G334530 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 1.8e-120
Identity = 229/251 (91.24%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 1   MKIRLKFCHQNQPTAKAMGSTTARVLTPHLLFPSSSSP--NPSTNPNPKSLKPFSFPNHN 60
           MKIRLKFCHQN+PT  AMGSTTAR+L PHLL PSSSS   NPSTN   KS KP SFPNHN
Sbjct: 25  MKIRLKFCHQNKPT--AMGSTTARLLIPHLLLPSSSSSSHNPSTNTRTKSSKPLSFPNHN 84

Query: 61  PLPTRRLLLFSLPIATAFLLPIPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAV 120
            LPTRRLLLFSLPIATAFLLPIP NPIQPSS  AVESFDPV+RSE++ASAAISRRVSEAV
Sbjct: 85  SLPTRRLLLFSLPIATAFLLPIPGNPIQPSSSFAVESFDPVSRSEKDASAAISRRVSEAV 144

Query: 121 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 180
           ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME
Sbjct: 145 ELLDKGRELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEME 204

Query: 181 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSL 240
           DVSISLKGYPEVHAALAAALYVDKHAALLAENQF IATLLDPHYVDISYVKETKHWPPSL
Sbjct: 205 DVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISYVKETKHWPPSL 264

Query: 241 ISSLQHFLTLS 250
           ISSLQHFLTLS
Sbjct: 265 ISSLQHFLTLS 273

[Close]

BLAST of ClCG02G000450 vs. NCBI nr
Match: gi|659121929|ref|XP_008460886.1| (PREDICTED: uncharacterized protein LOC103499627 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 5.9e-100
Identity = 195/217 (89.86%), Postives = 200/217 (92.17%), Query Frame = 1


Query: 18  MGSTTARVLTPHLLFPSSSSP--------NPSTNPNPKSLKPFSFPNHNPLPTRRLLLFS 77
           MGSTTAR+L PHLLFPSSSS         NPSTNP+ KS KP SFPNHN LPTRRLLLFS
Sbjct: 1   MGSTTARLLIPHLLFPSSSSSSSSSSSSHNPSTNPHTKSSKPLSFPNHNSLPTRRLLLFS 60

Query: 78  LPIATAFLLPIPSNPIQPSSCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGRELQA 137
           LPIATAFLLPIP+NPIQPSS  AVESFDPV+RSE+EASAAISRRVSEAVELLDKGRELQA
Sbjct: 61  LPIATAFLLPIPNNPIQPSSSFAVESFDPVSRSEKEASAAISRRVSEAVELLDKGRELQA 120

Query: 138 LGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPE 197
           LGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPE
Sbjct: 121 LGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPE 180

Query: 198 VHAALAAALYVDKHAALLAENQFAIATLLDPHYVDIS 227
           VHAALAAALYVDKHAALLAENQF IATLLDPHYVDIS
Sbjct: 181 VHAALAAALYVDKHAALLAENQFTIATLLDPHYVDIS 217

[Close]

BLAST of ClCG02G000450 vs. NCBI nr
Match: gi|595865396|ref|XP_007211943.1| (hypothetical protein PRUPE_ppa010783mg [Prunus persica])

HSP 1 Score: 303.9 bits (777), Expect = 2.6e-79
Identity = 171/244 (70.08%), Postives = 194/244 (79.51%), Query Frame = 1


Query: 18  MGSTTARVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAFL 77
           MG+  A +  PHLL   SSS   +  PN KSL PFS     PL +RRL+LF+LP+AT FL
Sbjct: 1   MGACKAPI--PHLLMTCSSSL--AQPPNLKSLNPFS---KTPLLSRRLVLFTLPLAT-FL 60

Query: 78  LP-------IPSNPIQ----PS-SCRAVESFDPVTRSEREASAAISRRVSEAVELLDKGR 137
           LP       I SN I     PS S  A+ +FDP++ SER+AS AISRR+S+A+ELL+KGR
Sbjct: 61  LPRKGSCGDISSNSIDVNSTPSGSSSALSNFDPISASERDASDAISRRISDALELLEKGR 120

Query: 138 ELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLK 197
           ELQALGDFNQALL FTQVI+KY DFAFSDYARVGR+L LYE+G+REEAIAEMEDVSISLK
Sbjct: 121 ELQALGDFNQALLCFTQVIEKYDDFAFSDYARVGRSLILYEVGNREEAIAEMEDVSISLK 180

Query: 198 GYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHF 250
           GYPEVHAALAAALY DKHA LLAENQF IATLLDPHY D+SYVKETKHWPPSL+SSL HF
Sbjct: 181 GYPEVHAALAAALYADKHAPLLAENQFTIATLLDPHYTDLSYVKETKHWPPSLVSSLYHF 236

[Close]

BLAST of ClCG02G000450 vs. NCBI nr
Match: gi|645242633|ref|XP_008227628.1| (PREDICTED: uncharacterized protein LOC103327117 [Prunus mume])

HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78
Identity = 166/244 (68.03%), Postives = 193/244 (79.10%), Query Frame = 1


Query: 18  MGSTTARVLTPHLLFPSSSSPNPSTNPNPKSLKPFSFPNHNPLPTRRLLLFSLPIATAFL 77
           MG+  A +  PHLL   SSS   +  PN KSL PFS     PL +RRL+LF+LP+AT FL
Sbjct: 1   MGACKAPI--PHLLMTCSSSL--AQPPNLKSLNPFS---KTPLLSRRLVLFTLPLAT-FL 60

Query: 78  LP-------IPSNPIQPSSC-----RAVESFDPVTRSEREASAAISRRVSEAVELLDKGR 137
           LP       I SN I  +S       A+ +FDP++ +ER+AS AISRR+S+A+ELL+KGR
Sbjct: 61  LPSKGSCGDISSNSIDENSTPSGSSSALSNFDPISAAERDASDAISRRISDALELLEKGR 120

Query: 138 ELQALGDFNQALLYFTQVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLK 197
           ELQALGDFNQAL+ FTQVI+KY DFAFSDYARVGR+L LYE+G+REEAIAEMEDVSISLK
Sbjct: 121 ELQALGDFNQALICFTQVIEKYNDFAFSDYARVGRSLILYEVGNREEAIAEMEDVSISLK 180

Query: 198 GYPEVHAALAAALYVDKHAALLAENQFAIATLLDPHYVDISYVKETKHWPPSLISSLQHF 250
           GYPEVHAALAAALY DKHA LLAENQF IATLLDPHY D+SYVK+TKHWPPSL+SSL HF
Sbjct: 181 GYPEVHAALAAALYADKHAPLLAENQFTIATLLDPHYTDLSYVKKTKHWPPSLVSSLYHF 236

The following BLAST results are available for this feature:

BLAST of ClCG02G000450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN32_CUCSA	1.2e-120	91.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G334530 PE=4 SV=1	[more]
M5WH51_PRUPE	1.8e-79	70.08	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010783mg PE=4 SV=1	[more]
V4SX87_9ROSI	5.4e-76	66.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002360mg PE=4 SV=1	[more]
A0A067E942_CITSI	2.0e-75	67.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027087mg PE=4 SV=1	[more]
A0A067KE93_JATCU	3.9e-74	66.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12797 PE=4 SV=1	[more]

BLAST of ClCG02G000450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670285\|ref\|XP_004147349.2\|	1.8e-120	91.24	PREDICTED: uncharacterized protein LOC101214268 [Cucumis sativus]	[more]
gi\|700207083\|gb\|KGN62202.1\|	1.8e-120	91.24	hypothetical protein Csa_2G334530 [Cucumis sativus]	[more]
gi\|659121929\|ref\|XP_008460886.1\|	5.9e-100	89.86	PREDICTED: uncharacterized protein LOC103499627 [Cucumis melo]	[more]
gi\|595865396\|ref\|XP_007211943.1\|	2.6e-79	70.08	hypothetical protein PRUPE_ppa010783mg [Prunus persica]	[more]
gi\|645242633\|ref\|XP_008227628.1\|	2.2e-78	68.03	PREDICTED: uncharacterized protein LOC103327117 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000450.1	ClCG02G000450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 109..225 score: 6.8
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 109..226 score: 3.56
None	No IPR available	PANTHER	PTHR37910	FAMILY NOT NAMED	coord: 2..249 score: 6.5
None	No IPR available	PANTHER	PTHR37910:SF1	SUBFAMILY NOT NAMED	coord: 2..249 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G000450	Csa2G334530	Cucumber (Chinese Long) v2	cuwcgB126
ClCG02G000450	MELO3C023232	Melon (DHL92) v3.5.1	mewcgB091
ClCG02G000450	Cla007818	Watermelon (97103) v1	wcgwmB206
ClCG02G000450	Cla97C02G026700	Watermelon (97103) v2	wcgwmbB138
ClCG02G000450	CSPIUnG00750	Wild cucumber (PI 183967)	cpiwcgB096
ClCG02G000450	CmaCh20G010580	Cucurbita maxima (Rimu)	cmawcgB482
ClCG02G000450	CmoCh02G006410	Cucurbita moschata (Rifu)	cmowcgB540
ClCG02G000450	CmoCh20G010660	Cucurbita moschata (Rifu)	cmowcgB480
ClCG02G000450	Lsi10G007420	Bottle gourd (USVL1VR-Ls)	lsiwcgB056
ClCG02G000450	Cp4.1LG16g00860	Cucurbita pepo (Zucchini)	cpewcgB268
ClCG02G000450	CsGy2G015810	Cucumber (Gy14) v2	cgybwcgB121
ClCG02G000450	MELO3C023232.2	Melon (DHL92) v3.6.1	medwcgB089
ClCG02G000450	Carg24314	Silver-seed gourd	carwcgB0694
ClCG02G000450	CsaV3_2G019410	Cucumber (Chinese Long) v3	cucwcgB139

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G000450	Cucurbita pepo (Zucchini)	cpewcgB274
ClCG02G000450	Cucurbita pepo (Zucchini)	cpewcgB647
ClCG02G000450	Silver-seed gourd	carwcgB1030
ClCG02G000450	Wax gourd	wcgwgoB303
ClCG02G000450	Cucumber (Gy14) v1	cgywcgB401
ClCG02G000450	Cucurbita maxima (Rimu)	cmawcgB544
ClCG02G000450	Wild cucumber (PI 183967)	cpiwcgB133