ClCG02G000140 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000140
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	myb domain protein 4 LENGTH=282
Location	CG_Chr02 : 202875 .. 204487 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAGATCTCCTTGCTGTGAGAAACAACACACCAACAAAGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATCAACTACATCCAAATCCACGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCTGCTGGTGCGCTTAATTAATTGAACATTATATTCCAACTTCTAACTTCTTCTAATTATATATTATCATTTCCTACCATTTTTATAAATATATTTCAATACACAATATAGGGTTGTTTCGGTGTGGTAAGAGTTGTCGGCTACGATGGATCAATTATCTCCGTCCAGATCTCAAGAGAGGGAATTTCACTCCTGAGGAAGATGAAATCATCATCAATCTCCATAGTCTACTTGGTAACAAGTAAGCATATCAAATCAATACCTCCTATCTATCTTCTTTCTAACTCTACCTTCTCTATATATATATTTACTACTTTGGTTGCACTTTGAATAATTCCTTTTTTTTTCTTGTGTCTAGATAATCTAGATTCTATTGGTTAAGGAATCTACAATCAACGATGAATAGAAAACGTAAAATAATAGAAAGAAGCGACACAAGAATTGATGTGGTTTGTCGCTACGTGTATATTAGTTATGTCTACGAATAGATAGAGAGAGATTACAGAGTTAGAGGTATGAGTGAGTAGGGTAGTAGGTATAATTTATATATACACCACGCTCTTCTAAACTCTTGGCCCAAAATCGTAAATATTGCAAATAACATAAATACAAATACAACTTAAGTTTTGGGGTTGTTGCCTTGTTATTTAAAAACTCTTTTTAGATTAACAACATTTTTATGTTTTGAGTGTGTAAATTTTGAATATGAAAATTTAAAAGGTAGAATTATATTAAAATGGCTAATAAATATTAGTTAATAAGTATAGTATTCATGTTTACGACTCAACTCGTTTTTCTTTTAAATTAAAATATGTATCAGGTAATGTATTAGAAATATATTATAGGAAACAAAATTATAATTAATAAATATTAACTTAAAACATTGATCAACTAGATATATTATCAAATACATTTTTGAAGAATTTATTAAATTACAATTCAATTTTTAAATCAGTTATCAAACACATATTCGAAAATGTGAAATATTACAATTCCTTATTTTCAAATTTCTGTTTTAAAATTGTCTACTTAACCAACCAAAAGTTTTTAGTTTAATTAGAAGTAAAATTAATTTCAGGTGGTCTTTAATTGCGGCACGATTACCTGGAAGAACGGATAATGAGATAAAGAACTACTGGAACACACACATAAAACGCAAACTCTACAACCGAGGAATCGACCCTCAGACGCATCGTCCATTGGTCAATAATAGTAGCACCGGCGACATTGACCGGCGACAGGAAGATTCAAACAGCAACAGCAGCAACAGTTGTTTGACGACAGAGGTGGAAGAAAATCCGCCATTGAATCTCAATCTAGAGCTCTCCATTGGCCTTCATCCCCATAACCCAATTACCAAAAACCCCCACGGAAAAGGGGAGGCTCCTGTTTTATTCCAATTTTGTGCACCACAAACAGAATTAGAAACTGAAACTTCCTCCTCCGTCCCCCATCTCTTTAGATATTACACATCATCCACTTCTTAA

mRNA sequence

ATGGGCAGATCTCCTTGCTGTGAGAAACAACACACCAACAAAGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATCAACTACATCCAAATCCACGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCTGCTGGGTTGTTTCGGTGTGGTAAGAGTTGTCGGCTACGATGGATCAATTATCTCCGTCCAGATCTCAAGAGAGGGAATTTCACTCCTGAGGAAGATGAAATCATCATCAATCTCCATAGTCTACTTGGTAACAAGTGGTCTTTAATTGCGGCACGATTACCTGGAAGAACGGATAATGAGATAAAGAACTACTGGAACACACACATAAAACGCAAACTCTACAACCGAGGAATCGACCCTCAGACGCATCGTCCATTGGTCAATAATAGTAGCACCGGCGACATTGACCGGCGACAGGAAGATTCAAACAGCAACAGCAGCAACAGTTGTTTGACGACAGAGGTGGAAGAAAATCCGCCATTGAATCTCAATCTAGAGCTCTCCATTGGCCTTCATCCCCATAACCCAATTACCAAAAACCCCCACGGAAAAGGGGAGGCTCCTGTTTTATTCCAATTTTGTGCACCACAAACAGAATTAGAAACTGAAACTTCCTCCTCCGTCCCCCATCTCTTTAGATATTACACATCATCCACTTCTTAA

Coding sequence (CDS)

ATGGGCAGATCTCCTTGCTGTGAGAAACAACACACCAACAAAGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATCAACTACATCCAAATCCACGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCTGCTGGGTTGTTTCGGTGTGGTAAGAGTTGTCGGCTACGATGGATCAATTATCTCCGTCCAGATCTCAAGAGAGGGAATTTCACTCCTGAGGAAGATGAAATCATCATCAATCTCCATAGTCTACTTGGTAACAAGTGGTCTTTAATTGCGGCACGATTACCTGGAAGAACGGATAATGAGATAAAGAACTACTGGAACACACACATAAAACGCAAACTCTACAACCGAGGAATCGACCCTCAGACGCATCGTCCATTGGTCAATAATAGTAGCACCGGCGACATTGACCGGCGACAGGAAGATTCAAACAGCAACAGCAGCAACAGTTGTTTGACGACAGAGGTGGAAGAAAATCCGCCATTGAATCTCAATCTAGAGCTCTCCATTGGCCTTCATCCCCATAACCCAATTACCAAAAACCCCCACGGAAAAGGGGAGGCTCCTGTTTTATTCCAATTTTGTGCACCACAAACAGAATTAGAAACTGAAACTTCCTCCTCCGTCCCCCATCTCTTTAGATATTACACATCATCCACTTCTTAA

Protein sequence

MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINYLRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRGIDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEVEENPPLNLNLELSIGLHPHNPITKNPHGKGEAPVLFQFCAPQTELETETSSSVPHLFRYYTSSTS

Homology

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BLAST of ClCG02G000140 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.3e-70
Identity = 140/222 (63.06%), Postives = 155/222 (69.82%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEEDQRLINYI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDEIII LHSLLGNKWSLIA  LPGRTDNEIKNYWNTHIKRKL +RG
Sbjct: 61  LRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSRG 120

Query: 121 IDPQTHR------------PLVNN---------SSTGDIDRRQEDSNSNSSNS-----CL 180
           IDPQTHR            P VNN         S++ +I     D+N+NSS+S     C 
Sbjct: 121 IDPQTHRSLNSATTTATATPTVNNSCLDFRTSPSNSKNICMPTTDNNNNSSSSTDDTKCN 180

Query: 181 TTEVEEN------PPLN-------LNLELSIGLHPHNPITKN 184
           ++  EE+      PP         ++LELS+GL   +   K+
Sbjct: 181 SSTTEESQSLITPPPKEEEKSVPLVDLELSLGLPSQSQCNKS 222

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BLAST of ClCG02G000140 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.1e-68
Identity = 120/157 (76.43%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEED+RL+ YI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHI+RKL NRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQ-EDSNSNSSNSCLTT 157
           IDP +HRP+  +S++ D    Q E   SN+ N   T+
Sbjct: 121 IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTS 157

[Close]

BLAST of ClCG02G000140 vs. Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.9e-68
Identity = 126/184 (68.48%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEED RL+ YI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHI+RKL +RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEV-------EENPPL-----NLNL 173
           IDP THR + + +++ D       SN+NS       +V       EEN P+     +LNL
Sbjct: 121 IDPTTHRSINDGTASQDQVTTISFSNANSKEEDTKHKVAVDIMIKEENSPVQERCPDLNL 180

[Close]

BLAST of ClCG02G000140 vs. Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.0e-66
Identity = 125/204 (61.27%), Postives = 147/204 (72.06%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEEDQRL++YI+ HG+GCWRSLPK+AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT +ED+III LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHIKRKL + G
Sbjct: 61  LRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHG 120

Query: 121 IDPQTHR--------------PLVNNS-----STGDIDRRQEDSNSNSSNSCLTTEVEE- 174
           IDPQTHR              P+ N++     S   +  + E+S+ N +++  TT  E+ 
Sbjct: 121 IDPQTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSSDNGASTSGTTTDEDL 180

[Close]

BLAST of ClCG02G000140 vs. Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65
Identity = 120/178 (67.42%), Postives = 136/178 (76.40%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTN+GAWTKEED+RL+ YI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT +ED++I+ LHSLLGNKWSLIAARLPGRTDNEIKNYWNTH++RKL  RG
Sbjct: 61  LRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEVEEN-------PPLNLNLELS 172
           IDP THRP+  ++ T      Q    S S+ +    E E         P LNL+L +S
Sbjct: 121 IDPVTHRPIAADAVTVTTVSFQP---SPSAAAAAAAEAEATAAKAPRCPDLNLDLCIS 175

[Close]

BLAST of ClCG02G000140 vs. TrEMBL
Match: A0A059PSL8_SALMI (MYB-related transcription factor OS=Salvia miltiorrhiza GN=MYB28 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEEDQRLI+YI+ HG+GCWRSLPK+AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLISYIRAHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHIKRKL  RG
Sbjct: 61  LRPDLKRGNFTEEEDEVIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLRRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEVEENPPLNLNLELSIGLHP 177
           +DPQTHR + N S T  +    E +NS+S+++  TT  EE+    L+L+LSIG+ P
Sbjct: 121 MDPQTHRQINNRSPTPPLP--PEQNNSSSADNSTTTTAEEDG--GLDLDLSIGIRP 172

[Close]

BLAST of ClCG02G000140 vs. TrEMBL
Match: V4RXM7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026112mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-70
Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEED+RLINYI++HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IIN HSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPL---------VNNSSTGDIDRRQEDSNSNSSNSC---LTTEVEENPPL 165
           IDPQTHRPL           N++  + ++R  ++++N+   C       V+ N P+
Sbjct: 121 IDPQTHRPLNSAPVPAPSPGNNNNNNSNKRNNNTSTNTKTDCSNKFEMNVQSNRPV 176

[Close]

BLAST of ClCG02G000140 vs. TrEMBL
Match: A0A067F6D4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021220mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-70
Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEED+RLINYI++HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IIN HSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPL---------VNNSSTGDIDRRQEDSNSNSSNSC---LTTEVEENPPL 165
           IDPQTHRPL           N++  + ++R  ++++N+   C       V+ N P+
Sbjct: 121 IDPQTHRPLNSAPVPAPSPGNNNNNNSNKRNNNTSTNTKTDCSNKFEMNVQSNRPV 176

[Close]

BLAST of ClCG02G000140 vs. TrEMBL
Match: I1KBT0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G160500 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 141/218 (64.68%), Postives = 160/218 (73.39%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEED+RLINYI++HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPLVNNSST------------GDIDRRQEDSNSN-------------------- 180
           IDPQTHRPL   S+T             +  ++ +++N+N                    
Sbjct: 121 IDPQTHRPLNAASATPATTVTATAVPSSNSKKKIKNNNNNNNGFQLVNNSAYANTKIGTD 180

[Close]

BLAST of ClCG02G000140 vs. TrEMBL
Match: A0A0B2PQ10_GLYSO (Myb-related protein 308 OS=Glycine soja GN=glysoja_011951 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 141/218 (64.68%), Postives = 160/218 (73.39%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEED+RLINYI++HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPLVNNSST------------GDIDRRQEDSNSN-------------------- 180
           IDPQTHRPL   S+T             +  ++ +++N+N                    
Sbjct: 121 IDPQTHRPLNAASATPATTVTATAVPSSNSKKKIKNNNNNNNGFQLVNNSAYANTKIGTD 180

[Close]

BLAST of ClCG02G000140 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4)

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-69
Identity = 120/157 (76.43%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEED+RL+ YI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHI+RKL NRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQ-EDSNSNSSNSCLTT 157
           IDP +HRP+  +S++ D    Q E   SN+ N   T+
Sbjct: 121 IDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTS 157

[Close]

BLAST of ClCG02G000140 vs. TAIR10
Match: AT4G09460.1 (AT4G09460.1 myb domain protein 6)

HSP 1 Score: 252.3 bits (643), Expect = 2.8e-67
Identity = 125/204 (61.27%), Postives = 147/204 (72.06%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEEDQRL++YI+ HG+GCWRSLPK+AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT +ED+III LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHIKRKL + G
Sbjct: 61  LRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHG 120

Query: 121 IDPQTHR--------------PLVNNS-----STGDIDRRQEDSNSNSSNSCLTTEVEE- 174
           IDPQTHR              P+ N++     S   +  + E+S+ N +++  TT  E+ 
Sbjct: 121 IDPQTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSSDNGASTSGTTTDEDL 180

[Close]

BLAST of ClCG02G000140 vs. TAIR10
Match: AT2G16720.1 (AT2G16720.1 myb domain protein 7)

HSP 1 Score: 250.4 bits (638), Expect = 1.1e-66
Identity = 111/143 (77.62%), Postives = 126/143 (88.11%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+H NKGAWTKEED+RL++YI+ HG+GCWRSLP+AAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT +EDE+II LHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL ++G
Sbjct: 61  LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQE 144
           IDP THR  +N +   D+ + ++
Sbjct: 121 IDPATHRG-INEAKISDLKKTKD 142

[Close]

BLAST of ClCG02G000140 vs. TAIR10
Match: AT4G34990.1 (AT4G34990.1 myb domain protein 32)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66
Identity = 116/164 (70.73%), Postives = 131/164 (79.88%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEED +LI+YI+ HG+GCWRSLP++AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EED++II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTH+KRKL  +G
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEVEENPPL 165
           IDP THRP +N + T      Q+ S+S+ +   L   +   P L
Sbjct: 121 IDPATHRP-INETKTS-----QDSSDSSKTEDPLVKILSFGPQL 158

[Close]

BLAST of ClCG02G000140 vs. TAIR10
Match: AT1G22640.1 (AT1G22640.1 myb domain protein 3)

HSP 1 Score: 244.6 bits (623), Expect = 5.8e-65
Identity = 111/133 (83.46%), Postives = 119/133 (89.47%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK H NKGAWTKEEDQ L++YI+ HG+GCWRSLP+AAGL RCGKSCRLRW+NY
Sbjct: 1   MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHIKRKL +RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRG 120

Query: 121 IDPQTHRPLVNNS 134
           IDP +HR L+N S
Sbjct: 121 IDPNSHR-LINES 132

[Close]

BLAST of ClCG02G000140 vs. NCBI nr
Match: gi|778670368|ref|XP_004147356.2| (PREDICTED: myb-related protein 330-like [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.4e-113
Identity = 201/230 (87.39%), Postives = 210/230 (91.30%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EED+IIINLH+LLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPLVNN--SSTGDIDRRQEDSNSN-SSNSCLTTEVEENPPLNLNLELSIGLHPH 180
           IDPQTHRPL NN  SSTGD DRR+EDSNSN SSNSCLTTEVEENPP NLNLELSIGLHPH
Sbjct: 121 IDPQTHRPLANNSSSSTGDFDRRREDSNSNSSSNSCLTTEVEENPPSNLNLELSIGLHPH 180

Query: 181 NPITKNPHGKG----EAPVLFQFCAPQTELETETSSSVPHLFRYYTSSTS 224
           N ITKN + KG    EAPVLF+FC+PQTELET+  SS PH+FRYYT S S
Sbjct: 181 NQITKNTNPKGDDHQEAPVLFKFCSPQTELETQNFSSTPHMFRYYTPSPS 230

[Close]

BLAST of ClCG02G000140 vs. NCBI nr
Match: gi|659121837|ref|XP_008460839.1| (PREDICTED: myb-related protein 330-like [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.4e-113
Identity = 200/229 (87.34%), Postives = 211/229 (92.14%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EED+IIINLH+LLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY++G
Sbjct: 61  LRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSQG 120

Query: 121 IDPQTHRPLVNN-SSTGDIDRRQEDSNSN-SSNSCLTTEVEENPPLNLNLELSIGLHPHN 180
           IDPQTHRPL NN SST D DRR+EDSNSN SSNSCLTTEVEENPPLNLNLELSIGLHPHN
Sbjct: 121 IDPQTHRPLANNRSSTSDFDRRREDSNSNSSSNSCLTTEVEENPPLNLNLELSIGLHPHN 180

Query: 181 PITKNPHGKGE----APVLFQFCAPQTELETETSSSVPHLFRYYTSSTS 224
            ITKNP+ KG+    APVLF+FC+PQTELET+  SS PH+FRYYT S S
Sbjct: 181 QITKNPNPKGDDHQKAPVLFKFCSPQTELETQHFSSTPHIFRYYTPSPS 229

[Close]

BLAST of ClCG02G000140 vs. NCBI nr
Match: gi|296084807|emb|CBI27689.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 283.1 bits (723), Expect = 4.2e-73
Identity = 144/221 (65.16%), Postives = 162/221 (73.30%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEEDQRLI YI+ HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDQRLIAYIKTHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IINLHS  GNKWSLIA RLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTDEEDELIINLHSFFGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPLVNNSSTG------DIDRRQEDSNSNSSNSCLTTEVEENPPLN--------- 180
           IDPQTHRPL + +ST       +  +R   ++ N+SNS   +E  + PP +         
Sbjct: 121 IDPQTHRPLSSAASTAATSATINNSKRSNSTSKNTSNS--ESEAAKTPPYSNSSSGVTTE 180

Query: 181 -----LNLELSIGLHPHNP-----ITKNPHGKGEAPVLFQF 197
                LNLELSIGL PH P       K P  + +  + FQF
Sbjct: 181 ELYPQLNLELSIGL-PHRPQIQATNVKEPKKQPQEQLPFQF 218

[Close]

BLAST of ClCG02G000140 vs. NCBI nr
Match: gi|510794172|gb|AGN52052.1| (MYB-related transcription factor [Salvia miltiorrhiza])

HSP 1 Score: 276.9 bits (707), Expect = 3.0e-71
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK HTNKGAWTKEEDQRLI+YI+ HG+GCWRSLPK+AGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLISYIRAHGEGCWRSLPKSAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+II LHSLLGNKWSLIA RLPGRTDNEIKNYWNTHIKRKL  RG
Sbjct: 61  LRPDLKRGNFTEEEDEVIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLRRG 120

Query: 121 IDPQTHRPLVNNSSTGDIDRRQEDSNSNSSNSCLTTEVEENPPLNLNLELSIGLHP 177
           +DPQTHR + N S T  +    E +NS+S+++  TT  EE+    L+L+LSIG+ P
Sbjct: 121 MDPQTHRQINNRSPTPPLP--PEQNNSSSADNSTTTTAEEDG--GLDLDLSIGIRP 172

[Close]

BLAST of ClCG02G000140 vs. NCBI nr
Match: gi|567867591|ref|XP_006426418.1| (hypothetical protein CICLE_v10026112mg [Citrus clementina])

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-70
Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 1


Query: 1   MGRSPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGLFRCGKSCRLRWINY 60
           MGRSPCCEK+HTNKGAWTKEED+RLINYI++HG+GCWRSLPKAAGL RCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKEHTNKGAWTKEEDERLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGNFTPEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYNRG 120
           LRPDLKRGNFT EEDE+IIN HSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLY+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIINFHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 120

Query: 121 IDPQTHRPL---------VNNSSTGDIDRRQEDSNSNSSNSC---LTTEVEENPPL 165
           IDPQTHRPL           N++  + ++R  ++++N+   C       V+ N P+
Sbjct: 121 IDPQTHRPLNSAPVPAPSPGNNNNNNSNKRNNNTSTNTKTDCSNKFEMNVQSNRPV 176

The following BLAST results are available for this feature:

BLAST of ClCG02G000140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB30_ANTMA	4.3e-70	63.06	Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1	[more]
MYB4_ARATH	3.1e-68	76.43	Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1	[more]
MYB08_ANTMA	6.9e-68	68.48	Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1	[more]
MYB6_ARATH	5.0e-66	61.27	Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1	[more]
MYB38_MAIZE	1.1e-65	67.42	Myb-related protein Zm38 OS=Zea mays PE=2 SV=1	[more]

BLAST of ClCG02G000140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059PSL8_SALMI	2.1e-71	74.43	MYB-related transcription factor OS=Salvia miltiorrhiza GN=MYB28 PE=2 SV=1	[more]
V4RXM7_9ROSI	1.0e-70	71.59	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026112mg PE=4 SV=1	[more]
A0A067F6D4_CITSI	1.0e-70	71.59	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021220mg PE=4 SV=1	[more]
I1KBT0_SOYBN	1.4e-70	64.68	Uncharacterized protein OS=Glycine max GN=GLYMA_06G160500 PE=4 SV=1	[more]
A0A0B2PQ10_GLYSO	1.4e-70	64.68	Myb-related protein 308 OS=Glycine soja GN=glysoja_011951 PE=4 SV=1	[more]

BLAST of ClCG02G000140 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38620.1	1.8e-69	76.43	myb domain protein 4	[more]
AT4G09460.1	2.8e-67	61.27	myb domain protein 6	[more]
AT2G16720.1	1.1e-66	77.62	myb domain protein 7	[more]
AT4G34990.1	1.4e-66	70.73	myb domain protein 32	[more]
AT1G22640.1	5.8e-65	83.46	myb domain protein 3	[more]

BLAST of ClCG02G000140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670368\|ref\|XP_004147356.2\|	1.4e-113	87.39	PREDICTED: myb-related protein 330-like [Cucumis sativus]	[more]
gi\|659121837\|ref\|XP_008460839.1\|	1.4e-113	87.34	PREDICTED: myb-related protein 330-like [Cucumis melo]	[more]
gi\|296084807\|emb\|CBI27689.3\|	4.2e-73	65.16	unnamed protein product [Vitis vinifera]	[more]
gi\|510794172\|gb\|AGN52052.1\|	3.0e-71	74.43	MYB-related transcription factor [Salvia miltiorrhiza]	[more]
gi\|567867591\|ref\|XP_006426418.1\|	1.5e-70	71.59	hypothetical protein CICLE_v10026112mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000140.1	ClCG02G000140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 67..111 score: 1.7E-17coord: 14..61 score: 1.1
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 score: 1.1E-13coord: 66..114 score: 4.0
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 15..68 score: 6.4E-24coord: 69..116 score: 2.5
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 12..108 score: 2.19
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 9..61 score: 16.908coord: 62..116 score: 29
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..131 score: 8.6E-114coord: 149..161 score: 8.6E
None	No IPR available	PANTHER	PTHR10641:SF643	MYB TRANSCRIPTION FACTOR-RELATED	coord: 1..131 score: 8.6E-114coord: 149..161 score: 8.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G000140	MELO3C023204	Melon (DHL92) v3.5.1	mewcgB091
ClCG02G000140	Cla007846	Watermelon (97103) v1	wcgwmB206
ClCG02G000140	Cla97C02G026370	Watermelon (97103) v2	wcgwmbB138
ClCG02G000140	Bhi10G001380	Wax gourd	wcgwgoB303
ClCG02G000140	CSPI02G16620	Wild cucumber (PI 183967)	cpiwcgB126
ClCG02G000140	Cucsa.228000	Cucumber (Gy14) v1	cgywcgB402
ClCG02G000140	CmaCh20G010330	Cucurbita maxima (Rimu)	cmawcgB482
ClCG02G000140	CmoCh20G010400	Cucurbita moschata (Rifu)	cmowcgB480
ClCG02G000140	Lsi10G007760	Bottle gourd (USVL1VR-Ls)	lsiwcgB056
ClCG02G000140	Cp4.1LG16g01100	Cucurbita pepo (Zucchini)	cpewcgB268
ClCG02G000140	CsGy2G016190	Cucumber (Gy14) v2	cgybwcgB116
ClCG02G000140	MELO3C023204.2	Melon (DHL92) v3.6.1	medwcgB089
ClCG02G000140	CsaV3_2G019820	Cucumber (Chinese Long) v3	cucwcgB135

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G000140	Cucumber (Gy14) v2	cgybwcgB121
ClCG02G000140	Cucumber (Chinese Long) v3	cucwcgB139
ClCG02G000140	Cucumber (Gy14) v1	cgywcgB401
ClCG02G000140	Cucurbita maxima (Rimu)	cmawcgB537
ClCG02G000140	Cucurbita moschata (Rifu)	cmowcgB537
ClCG02G000140	Wild cucumber (PI 183967)	cpiwcgB133
ClCG02G000140	Cucumber (Chinese Long) v2	cuwcgB126
ClCG02G000140	Cucurbita pepo (Zucchini)	cpewcgB274
ClCG02G000140	Cucurbita pepo (Zucchini)	cpewcgB669