ClCG01G024800 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAATCAAAGATGGCAGCTTTCTGCGATCTCTTATGTAGAAGTGGAAGGAGTATTTTTGGGGACACTGCTCACGGTGGTGAAGCAAATAAATAGGAGTAGCGATGCCATTGCCATTGACAACCCGATCGATTCCTCTCTTCCGAGGCACTGTAACGAAAAACCCTAATTCAAATTCCGGGAGACGACGACGACGACCCTGATTCTGTCATTTGGGGAATACCAAATATGGGTCCCAATACGAAGACCCACTTCAGAGATTGAGCTTTTTTTCATGCCCTCTCCCATCTCTCTGTCGATTCCCTTTCCTTTCTTTCGAGACGCATCCATGGCTGACGAATCGCAACAACCCCAATCTGAATCTCAACCTCCGCTCGAAGTCGATTCTGCACCTCCGCCACCGCCTCCGCCTTCTTTTGACCCCAGTCGAAGTAATATTTCTTTCTCCATCTTCGTTTTCTGACTCTGAGGGGTTTCTTTCTACTCGTTGTTGCTCGATGAAATTTTTCGTTTGTTGGGTTTTGTTAGGTATTGAATGTCGTTTTGGGGATTTATTAGGGTTGGGTGGTTCTGATCTGAACTCTCGAGTAATGGGGTTGTTGTTTTTTAAGCACTTGAGATTGATGGATTTAAACATTCTAGCTATGGGAATGGGCGAATTGGCTCCCCTCTTCTTTATGATATTGTAGCAACAAACTGTAATTTTTTATCTTGTCCGTGAGTTTTTTACTTTGAACTTGGACATTCAGGTTTTGAAACTGTAGTTTTTTACTTTGAACTTGGACATTCAGGTTTTGAAACTGTTTTTCAATCTTTGGGTTTGCCGCTTTGTTGTATGAGATGGTAAAGTAGAGTTGATCCATTCCCAATTTGAATGGTAGAGCAGAGATGTTTTAAGAGACGTTTCTTCTTAAAATTTTCCAGTTCCATGGATTGTAATTGTACTGATCAGTTTTTTCTCTTTCTCTTTTGAAGTGATTGGTATCATTAAACGGAAGGCCTTGATAAAAGAACTAGCTGCTGCGTATCACGCTGAGTGTCTTGTATACTGCCAAGAGCTTCTTGAGCTTCAAAGAAAGTGGGACGAGGTATGTAATTCAGCCTTATATTCCTTCTGCTTCAATGTTTTTTTTTCTTGGGACGTTCTATCAAAATGATTCAATACTTGAGCTGTCAAAATTTTCTTTGATCGAGCAACTATACTAGCGAATCACTAATCTCTGGTCATTGTCTATGAATATTCCTTCTGTTTCAATGTTTTCTTCTTGGGACGTTTTATCAAAACGATTCACTACTTAAATTTTCTTTGATCGAGCAACTATACTAGCGAACCATTAATCCCTGGTCGTTTTCTATGAACCAGATGTTTGAACTGCAGATTTTTGCCACAGACAAGTTTTACTGATCATAATAATTATAGTTTCTTTCACTGTCGGAAAATCATTCAATGTGGCTGCATTATAATAACGGTTGGATTAAAAAATTTGCATGCCCCCTAATAAACCACTAGATATAAATTTGAAGTAGTTCTCTCATAAATCCAATGGCAAAACACTGTTAGCCACATTGGATAATTCCTCTTCATTGTGCAATGGATATCTGTGTGATTCCAGATTTGTAACCTTCGATTATTCACCTGTGCTTACCACAGGGTTATGAGGATTATAATATACTAGGTCTGTGGCTGGCAATTTATTTCTGGTAGTTATACTTATATCTTTGATTATAAGCTATTAAGGAACGTGGCTTTAGGTAGCAATTAGCCATAGAGAAAATATTTGTGGAGAATTCATATTGAGGTAGAGAATTTGTATGGATGGCTGAGATATTTTAACTAAACATAGATTCCGTTTTCATGATGGTGATGGTATTCCGGATCTGAGAGATTCTTCTACATGTTGAAAAATCCAATGATTTAATTTAAAGTTTCTTTACTTACTCATTGTTTCTTTATCTGCTTGCAGCCATATATTGAGTTAAAAGCACCTGATGATCCAAGAAAGGAGACAATGAAGCCTAGCAAACGTCAAAGGAAATCCCGCTAGGTATTTAATAAGCATTTTAGGAATTGGTTAGTTAATCCTCTACCAAGCTTTTTGTAACTTTTAGTCTCATATGGGGAATTTTTTTTTTTCTTCTTTTCGTTTTATAAAATAATAACAGTAGGCGTTGCGGCCGAGGTTATGCCGTATAATATTTGATTTAAAAAAAAAAAAGCCATGAGAATAAACCAGTTTGGTAACTTTCTGGTTTTTGGTCTTTTGAATATTAAGCCTATAAATGCTGAGTCTCTTTGTTTTGTTTCTACTTTTTACAAATATTTTCAAAATCCACATCAAGTTTTGAAACTTGAAAGAAAATACTGGTTTTTGGAATTTAGAATGTGAGCCATGAATTTAAAAATAGTTTACAATTGATTATTGAATGGGACCTTAATTTTCTAAATGGAATGGTGATCGTTCTTAAAATTTATCAAAGTGGAATATGAGGACTTGTGATTACTTAACATACTTGATGCATTCAACATAGAACCTTTCTGCTTTTCCAGTGCAAACATATTTCTTGAGTTAGCAATTCTTGTTACCTTTCTACCATCTCTTAATCTTTTTTTTCTCCCTCTCTTGCAGGCAATAAATATATTTGATGCTCCTAACTTGACTTGCGAATCTGATGGTTCTTCCGTTCTGCAAGACTCAAGAGAGACTTATGCGCAAGATTGATAGTCTGCTATGAATTGGCTGATTACTCTATGGATCCAACAATTTGTACACTCAGTTATGAAAACAGTGAAGTATATAAAGTATCTGTGTGCTGTAGCCTGTATGTATTCAATTTTTGTGCGATAATATCGCTACACAGCGGTAGGATTTAGTT GAAAGAATCAAAGATGGCAGCTTTCTGCGATCTCTTATGTAGAAGTGGAAGGAGTATTTTTGGGGACACTGCTCACGGTGGTGAAGCAAATAAATAGGAGTAGCGATGCCATTGCCATTGACAACCCGATCGATTCCTCTCTTCCGAGGCACTGTAACGAAAAACCCTAATTCAAATTCCGGGAGACGACGACGACGACCCTGATTCTGTCATTTGGGGAATACCAAATATGGGTCCCAATACGAAGACCCACTTCAGAGATTGAGCTTTTTTTCATGCCCTCTCCCATCTCTCTGTCGATTCCCTTTCCTTTCTTTCGAGACGCATCCATGGCTGACGAATCGCAACAACCCCAATCTGAATCTCAACCTCCGCTCGAAGTCGATTCTGCACCTCCGCCACCGCCTCCGCCTTCTTTTGACCCCAGTCGAATGATTGGTATCATTAAACGGAAGGCCTTGATAAAAGAACTAGCTGCTGCGTATCACGCTGAGTGTCTTGTATACTGCCAAGAGCTTCTTGAGCTTCAAAGAAAGTGGGACGAGCCATATATTGAGTTAAAAGCACCTGATGATCCAAGAAAGGAGACAATGAAGCCTAGCAAACGTCAAAGGAAATCCCGCTAGGTATTTAATAAGCATTTTAGGAATTGGCAATAAATATATTTGATGCTCCTAACTTGACTTGCGAATCTGATGGTTCTTCCGTTCTGCAAGACTCAAGAGAGACTTATGCGCAAGATTGATAGTCTGCTATGAATTGGCTGATTACTCTATGGATCCAACAATTTGTACACTCAGTTATGAAAACAGTGAAGTATATAAAGTATCTGTGTGCTGTAGCCTGTATGTATTCAATTTTTGTGCGATAATATCGCTACACAGCGGTAGGATTTAGTT ATGCCCTCTCCCATCTCTCTGTCGATTCCCTTTCCTTTCTTTCGAGACGCATCCATGGCTGACGAATCGCAACAACCCCAATCTGAATCTCAACCTCCGCTCGAAGTCGATTCTGCACCTCCGCCACCGCCTCCGCCTTCTTTTGACCCCAGTCGAATGATTGGTATCATTAAACGGAAGGCCTTGATAAAAGAACTAGCTGCTGCGTATCACGCTGAGTGTCTTGTATACTGCCAAGAGCTTCTTGAGCTTCAAAGAAAGTGGGACGAGCCATATATTGAGTTAAAAGCACCTGATGATCCAAGAAAGGAGACAATGAAGCCTAGCAAACGTCAAAGGAAATCCCGCTAG MPSPISLSIPFPFFRDASMADESQQPQSESQPPLEVDSAPPPPPPPSFDPSRMIGIIKRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETMKPSKRQRKSR
BLAST of ClCG01G024800 vs. TrEMBL
Match: A0A0A0KM14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524060 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 9.3e-47 Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 1
BLAST of ClCG01G024800 vs. TrEMBL
Match: A0A0B0N2G7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_00739 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.0e-32 Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 1
BLAST of ClCG01G024800 vs. TrEMBL
Match: A0A0D2VEH3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G238000 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.1e-31 Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of ClCG01G024800 vs. TrEMBL
Match: W9QXC0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005901 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.1e-31 Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 1
BLAST of ClCG01G024800 vs. TrEMBL
Match: A0A061GE22_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_029436 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-29 Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 1
BLAST of ClCG01G024800 vs. TAIR10
Match: AT4G18400.1 (AT4G18400.1 unknown protein) HSP 1 Score: 110.9 bits (276), Expect = 5.2e-25 Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = 1
BLAST of ClCG01G024800 vs. NCBI nr
Match: gi|449433722|ref|XP_004134646.1| (PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46 Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 1
BLAST of ClCG01G024800 vs. NCBI nr
Match: gi|659078216|ref|XP_008439608.1| (PREDICTED: uncharacterized protein LOC103484351 [Cucumis melo]) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46 Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 1
BLAST of ClCG01G024800 vs. NCBI nr
Match: gi|1009107039|ref|XP_015877564.1| (PREDICTED: uncharacterized protein LOC107413996 [Ziziphus jujuba]) HSP 1 Score: 152.1 bits (383), Expect = 5.8e-34 Identity = 72/95 (75.79%), Postives = 79/95 (83.16%), Query Frame = 1
BLAST of ClCG01G024800 vs. NCBI nr
Match: gi|728826549|gb|KHG06777.1| (hypothetical protein F383_00739 [Gossypium arboreum]) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32 Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 1
BLAST of ClCG01G024800 vs. NCBI nr
Match: gi|703063633|ref|XP_010087005.1| (hypothetical protein L484_005901 [Morus notabilis]) HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30 Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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