ClCG01G016500 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G016500
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Nuclear ribonuclease Z
Location	CG_Chr01 : 30892073 .. 30895210 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCGAAACCGGATGTAGCAGAAGCTTGGACTTGGACCCAATGGAAACGAGGAAGGGAATGCAGATTGAAGGATACCCAATTAAGGGCTCGTCCATTGGAGGTCATGAAACTTGCGTCATTTTCCCAACTCTCAATTTGGCCTTCGATATTGGTCGCTGCCCTCAAAAGGCCATAAGCCAGAACTTCCTTTTCATCTCCCATGGTCATATGGATCACATTGTAAGTCCAGGCCCTTCTCACGGCTTCATTTTTCAACCGTCTCATTATAATCTGAGCTTGTTCCATGGCGGGAGACCTCACGGTCGATATGCTTAGTAGATATTGCAGTGGAATTCCTTTGATTTAGGGTTTAGGGTTTGAAGTCTAGTAATTACCTGTGGTTTTGTTGCAGCTATCTTCAATCAATTCAAGTATCTGTTTAAGATTTGAATCTAGTTTTACCTTCCCAAGTTTGCTGGGAAGTTCTTATAATATTCAAGTCGAACATCGATCACAGTTCGAATGTTTTCGCGTTTTGTTCATCTGCAGCTTATCAGTAGCTTTTGTGCTTAATAGGGGGGACTTCCCTTGTACGTTGCTACCCGTGGATTATACAAAATGGAACCGCCAACAATTATTGTACCAAAATCCATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACAGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGTAGCGTCCCTTATTGAATATATTATTTTGTGAAATAAACAATGTGGTCAATTTTACCCAGTTTTCGTGTTCCAGTGTCTTACATTCTTCCATATATTTTGTTTGCAGGGGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGTGTTTAAGACATACCATGTCATTGACAGCCAGGTACTATTTCTTGCACATAACTTTGATTTTATTATTTTTTTATGTTTACTAATATCTTTAAAAAATATGCGAGTAGGAGATTTGAACTTACATACTTTTTTGCCAGTTGAACTATTTTCATGTTGGGATATTTGATGATTTTGTTCTTCTTTGAAGCCCAAAATTTACCTATAACCATGGCAGGGTTATGTACTTTACTCTGTAAAGCAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTCCGCTTATCTGGTGTTGAGGTCTGTCTTAACTGTTTTTTTAGATCAGAAACATTTCATTGATTAATGAAATAATAAGAAACACCAATAGGTGATTATAACAAAGTCTGTCTTGACTGTTAGATTCGTAGATTTCTTGAAATGAAACACATGCACTTTGAAAACTTCTTTTTATACATTCCATCATTGAAAAAGGGTATAGTGGCTACCCTAGCCGAACAACTAGTCTAGGAATTTGTGAGATTTATCGCAGGTGGGTGACCTAAAGAGTTTGAACCCACGATCATTTGGTTGAAATCAGGGCCTTTTCACTATATTGCCTTAAATCTCAACCTTCTTATTTCTTAGTTAAAGTCAACGAACTTTAAAGTTTTCCTCTGATTATACTTTTTCTTTTACATTTCCCATTCTTTAAACTTCTCCTTAAGTACATAACTTTCCTGGTTATTTTGCTTTGTGCCAGGTCACTAACACAATTACTGAACCTGAAGTGGCTTTTACTGGAGATACCACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTAATGGAGGTCTGGTACTTGAAGATTGCGCATTATCTTATTTTCCTCAAAAGTTTATTTGATGATTATTGTTACTTTAATCCTTTCATTGTCTGTTAAACTTTTGAATATAAGTAGAGCTTTGCACAGTGGAAAGTTGGAAACCACACACATTAGATAGAAGTATGATATATACTTTTTTATTAAAATATATATATATATATATATTAGACAGCATAATATATACTTATGAATGCAATAAAATAGAAGTTAGCATTATAATGTTGATTTTTTTTCCTGTATATGAGATTTTGCATGTTCATGGATTGGTATAAACTCAATTTTCTCATGTTCAAATCATTTAGAAACATGCATTTAATCCATCAAAATTAATTTGATGTTTGGTTTTACACTTCTAAACAGAATTTTCACATCATCAAAATTGATTTTAAATTGTTCACATTGTTTTAGGGTGATTTTAAAGATTATGAATATGACAAAAGTGATTTTAACTATTTTAAAATCACTTCCAAATATATCTACATATAGATTGGAAAGAGGTGTCGGTTATCATTTTGGGAGGGTGTGTTCTATTGAGGTCTAATCCTTCATGCTGCACACCCATTCTCTTTTGCAGAGCACATTTCTTGAAAATAGAGTTACAGTGGAGCATGCAAGAGAATACGGCCATACTCACCTGTTTGAGGTTCGTTCACTTAACATTGTAGCACCTGCTATTCCTGTATTCATTCAGCAACTTATATCTTATAATTTTACATCCTTTTGTGCTTCTTGTGTTGCTGATCCGTCCCAGATAATAAACCATGCCGAAAAGTTTAAGAATAAAGCGATACTTCTGATTCACTTTTCAGCTCGCTACACTGCAGAGGTACTTCTATGCCAGTTTATTGATCTCTCAAGTTCATCATGTTTTTAGTTAGTTTTCTGGTGCAATCCTTCTATTAGGTGACATCCTCTTCTTCCCAGTTTTATCTTTTGTAGAGAGGATTTAAGAGACTAATAAGTCCCAAGTTGATTTTCCGGTATGTATTGGTAAAGCTAAATACATTTCCTGCTTTTTGGTTAATCAGGAAATTCAGCAAGCCATAGCTACTTTACCTCCACCTTTGGCAGGCCGGGTTTCTGCGCTAACGGAAGGTTTTTAAGGTGGGGTGCAACCGTCGAATACACTTTTGTATTCACAGGTTATTTAGAAGTGTTCCGGAAATCATTTTGCTCACTTTTATACGTTTTTTTTAAAAAAAAAAAACCCTTTTTTAGTTCTATTGTAATTTTTCATGATTTGTTTTCTTGAATGCTTTCATTGCGAAAGTGGTGCTTTGAATTGGGTCTCTATGTTTGTGTGGGAAAATGCAAAATCAAATGCTACATTAGAGGATATTGATTGAATTGGTTCATGCAGTTTAAAG

mRNA sequence

ATGGCAGCCGAAACCGGATGTAGCAGAAGCTTGGACTTGGACCCAATGGAAACGAGGAAGGGAATGCAGATTGAAGGATACCCAATTAAGGGCTCGTCCATTGGAGGTCATGAAACTTGCGTCATTTTCCCAACTCTCAATTTGGCCTTCGATATTGGTCGCTGCCCTCAAAAGGCCATAAGCCAGAACTTCCTTTTCATCTCCCATGGTCATATGGATCACATTGGGGGACTTCCCTTGTACGTTGCTACCCGTGGATTATACAAAATGGAACCGCCAACAATTATTGTACCAAAATCCATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACAGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGGGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGTGTTTAAGACATACCATGTCATTGACAGCCAGGGTTATGTACTTTACTCTGTAAAGCAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTCCGCTTATCTGGTGTTGAGGTCACTAACACAATTACTGAACCTGAAGTGGCTTTTACTGGAGATACCACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTAATGGAGAGCACATTTCTTGAAAATAGAGTTACAGTGGAGCATGCAAGAGAATACGGCCATACTCACCTGTTTGAGGTTCGTTCACTTAACATTGTAGCACCTGCTATTCCTGTATTCATTCAGCAACTTATATCTTATAATTTTACATCCTTTTGTGCTTCTTGTGTTGCTGATCCGTCCCAGATAATAAACCATGCCGAAAAGTTTAAGAATAAAGCGATACTTCTGATTCACTTTTCAGCTCGCTACACTGCAGAGGAAATTCAGCAAGCCATAGCTACTTTACCTCCACCTTTGGCAGGCCGGGTTTCTGCGCTAACGGAAGGTTTTTAAGGTGGGGTGCAACCGTCGAATACACTTTTGTATTCACAGGTTATTTAGAAGTGTTCCGGAAATCATTTTGCTCACTTTTATACGTTTTTTTTAAAAAAAAAAAACCCTTTTTTAGTTCTATTGTAATTTTTCATGATTTGTTTTCTTGAATGCTTTCATTGCGAAAGTGGTGCTTTGAATTGGGTCTCTATGTTTGTGTGGGAAAATGCAAAATCAAATGCTACATTAGAGGATATTGATTGAATTGGTTCATGCAGTTTAAAG

Coding sequence (CDS)

ATGGCAGCCGAAACCGGATGTAGCAGAAGCTTGGACTTGGACCCAATGGAAACGAGGAAGGGAATGCAGATTGAAGGATACCCAATTAAGGGCTCGTCCATTGGAGGTCATGAAACTTGCGTCATTTTCCCAACTCTCAATTTGGCCTTCGATATTGGTCGCTGCCCTCAAAAGGCCATAAGCCAGAACTTCCTTTTCATCTCCCATGGTCATATGGATCACATTGGGGGACTTCCCTTGTACGTTGCTACCCGTGGATTATACAAAATGGAACCGCCAACAATTATTGTACCAAAATCCATAAAGAATGATGTAGAAAATCTCTTAGAGGTGCACAGAAGATTGGATCAATCTGAGCTGAGATGTAATTTGATTGGCTTGGAAGTGGGGGAAGAGTTGTCATTGAGAAGGGACCTCAAAGTGAGGGTGTTTAAGACATACCATGTCATTGACAGCCAGGGTTATGTACTTTACTCTGTAAAGCAGAAGCTTAAGAAAGAGTACTTGGGACTATCTGGCAACGAGATCAAGAAACTCCGCTTATCTGGTGTTGAGGTCACTAACACAATTACTGAACCTGAAGTGGCTTTTACTGGAGATACCACGTCTGACTTTATAGTTGATGAAAATAATATTGACGTATTGAGGGCAAAGATCCTAGTAATGGAGAGCACATTTCTTGAAAATAGAGTTACAGTGGAGCATGCAAGAGAATACGGCCATACTCACCTGTTTGAGGTTCGTTCACTTAACATTGTAGCACCTGCTATTCCTGTATTCATTCAGCAACTTATATCTTATAATTTTACATCCTTTTGTGCTTCTTGTGTTGCTGATCCGTCCCAGATAATAAACCATGCCGAAAAGTTTAAGAATAAAGCGATACTTCTGATTCACTTTTCAGCTCGCTACACTGCAGAGGAAATTCAGCAAGCCATAGCTACTTTACCTCCACCTTTGGCAGGCCGGGTTTCTGCGCTAACGGAAGGTTTTTAA

Protein sequence

MAAETGCSRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSARYTAEEIQQAIATLPPPLAGRVSALTEGF

Homology

[Close]

BLAST of ClCG01G016500 vs. Swiss-Prot
Match: RNZN_ARATH (Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3)

HSP 1 Score: 366.3 bits (939), Expect = 3.5e-100
Identity = 170/232 (73.28%), Postives = 203/232 (87.50%), Query Frame = 1


Query: 16  METRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHI 75
           ME +K MQIEGYPI+G SIGGHETC+IFP+L +AFDIGRCP +AISQ+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 76  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 135
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 136 RRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEV 195
           R+DLKV+ FKT+HVI SQGYV+YS K KLKKEY+GLSGNEIK L++SGVE+T++I  PEV
Sbjct: 121 RKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEV 180

Query: 196 AFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEV 248
           AFTGDTTSDF+VDE N D L+AK+LVMESTFL++ V+VEHAR+YGH H+ E+
Sbjct: 181 AFTGDTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEI 232

HSP 2 Score: 277.3 bits (708), Expect = 2.1e-73
Identity = 163/324 (50.31%), Postives = 203/324 (62.65%), Query Frame = 1


Query: 16  METRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHI 75
           ME +K MQIEGYPI+G SIGGHETC+IFP+L +AFDIGRCP +AISQ+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 76  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 135
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 136 RRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGN-EIKK--LRLSGVEVTNTITE 195
           R+DLKV+ FKT+HVI S             + Y+  S   ++KK  + LSG E+ N    
Sbjct: 121 RKDLKVKAFKTFHVIQS-------------QGYVVYSTKYKLKKEYIGLSGNEIKNL--- 180

Query: 196 PEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNI 255
                                    K+  +E T  ++ +T E A     T  F V   N 
Sbjct: 181 -------------------------KVSGVEIT--DSIITPEVAFTGDTTSDFVVDETNA 240

Query: 256 VAPAIPVFIQQLISYNFTSFCASCVADP-----SQIINHAEKFKNKAILLIHFSARYTAE 315
            A    V + +  ++   S       D      S+I+NHAEKF+NKAILLIHFSARYT +
Sbjct: 241 DALKAKVLVMES-TFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAILLIHFSARYTVK 280

Query: 316 EIQQAIATLPPPLAGRVSALTEGF 332
           EI+ A++ LPPPL GRV ALT+GF
Sbjct: 301 EIEDAVSALPPPLEGRVFALTQGF 280

[Close]

BLAST of ClCG01G016500 vs. Swiss-Prot
Match: RNZC_ARATH (Ribonuclease Z, chloroplastic OS=Arabidopsis thaliana GN=CPZ PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.4e-79
Identity = 136/229 (59.39%), Postives = 174/229 (75.98%), Query Frame = 1


Query: 19  RKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGL 78
           RKG+++E Y I+G S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 79  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 138
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 139 LKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVAFT 198
           + VR F T+HVI SQGYV+YSV++KL+K+Y  L G +I+K++ SGVE+T+TI  PE+AFT
Sbjct: 193 IVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFT 252

Query: 199 GDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEV 248
           GDTTS++++D  N D LRAK+L+ E+TFL+   + EHA+  GHTH+ ++
Sbjct: 253 GDTTSEYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQI 301

HSP 2 Score: 217.2 bits (552), Expect = 2.6e-55
Identity = 128/315 (40.63%), Postives = 176/315 (55.87%), Query Frame = 1


Query: 19  RKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGL 78
           RKG+++E Y I+G S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 79  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 138
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 139 LKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVAFT 198
           + VR F T+HVI SQGYV+Y               +  KKL+     +     E ++  +
Sbjct: 193 IVVRPFATHHVIPSQGYVIY---------------SVRKKLQKQYAHLKGKQIE-KIKKS 252

Query: 199 GDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNIVAPAIP 258
           G   +D I+                    E   T +   EY    + + R+ + +   + 
Sbjct: 253 GVEITDTILSP------------------EIAFTGDTTSEY----MLDPRNADALRAKVL 312

Query: 259 VFIQQLISYNFTSFCASCVADP--SQIINHAEKFKNKAILLIHFSARYTAEEIQQAIATL 318
           +     +  +F++  A  +     SQII +A+  ++K +LL HFS+RY  EEI++A+  L
Sbjct: 313 ITEATFLDESFSTEHAQALGHTHISQIIENAKWIRSKTVLLTHFSSRYHVEEIREAVLKL 349

Query: 319 PPPLAGRVSALTEGF 332
              ++ +V  LTEGF
Sbjct: 373 QSKVSAKVIPLTEGF 349

[Close]

BLAST of ClCG01G016500 vs. Swiss-Prot
Match: RNZN_WHEAT (Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum GN=ELAC PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-70
Identity = 122/170 (71.76%), Postives = 148/170 (87.06%), Query Frame = 1


Query: 22  MQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGLPLY 81
           ++IEGYP++G SIGGHETCVIFPTL+LAFDIGRCPQ+A++Q+FLFISH H+DHIGGLP+Y
Sbjct: 7   LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIGGLPMY 66

Query: 82  VATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRDLKV 141
           VATRGLY++ PPTI VPK ++  VE L +VHR +DQSEL   L+ L++GEE  LRRDLKV
Sbjct: 67  VATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIGEEYELRRDLKV 126

Query: 142 RVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTIT 192
           R FKTYH I SQGYV+YSVKQKLK++YLGL G+EIK+L+LSGVE+TNT+T
Sbjct: 127 RAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 176

[Close]

BLAST of ClCG01G016500 vs. Swiss-Prot
Match: RNZ_SULTO (Ribonuclease Z OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=rnz PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.1e-08
Identity = 53/199 (26.63%), Postives = 97/199 (48.74%), Query Frame = 1


Query: 67  ISHGHMDHIGGLPLYVATRGLYKMEPPTIIV-PKSIKNDVENLLEVHRRLDQSELRCNLI 126
           I+H H DH+ GLP  + T G+Y  +   +++ PK +K  +E++ +        E++    
Sbjct: 58  ITHMHGDHVLGLPGMIETMGMYSRKESLLLMGPKELKEFLEDIFKKTYFYPNFEIQI--- 117

Query: 127 GLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRL---- 186
            ++  E      ++K+  F+T H I+SQGY L+  K +LK +   L    IK  R+    
Sbjct: 118 -IDKYE----DENIKISTFETCHTIESQGY-LFEEKDRLKIDIDKLRKEGIKDWRIIRML 177

Query: 187 ---SGVEVTNTITEPE----------VAFTGDTTSDFIVDENNIDVLR-AKILVMESTFL 246
                VE+   +  PE          +A+TGDT       E  I+ ++   +L+ +STF+
Sbjct: 178 KEGKRVEINGKVLLPEDYLIVKKGIRIAYTGDTGP----CEKVINAVKDVDLLIHDSTFI 237

[Close]

BLAST of ClCG01G016500 vs. Swiss-Prot
Match: RNZ_STAS1 (Ribonuclease Z OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rnz PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.0e-06
Identity = 62/232 (26.72%), Postives = 94/232 (40.52%), Query Frame = 1


Query: 50  FDIGRCPQKAISQN--------FLFISHGHMDHIGGLPLYVATRGLYKME--PPTIIVPK 109
           FD+G   Q  I  +         +FI+H H DHI GLP  + +R     E  P T+I PK
Sbjct: 36  FDVGEGTQHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEGKPLTLIGPK 95

Query: 110 SIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD-LKVRVFKTYHVIDSQGY--- 169
            IK  +E  L    RL +S+L   +  +E+   LS + +   V      H I S GY   
Sbjct: 96  GIKAYIETTL----RLSESKLNYPITYIEIENHLSYQNNGFNVEAHMLNHGIPSFGYRIE 155

Query: 170 -----------VLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVT------NTITEPEVAFT 229
                       L  +  +   +Y  +  NE      +G+         + +  P +A  
Sbjct: 156 APYTSGKIDVSALKEIGLEPGPKYQDVKNNE--TFEYNGIIYNSKDFKGDAVKGPVIAIF 215

Query: 230 GDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSL 251
           GDT          I    A ++V EST++E   ++  A  Y H+H+ +V +L
Sbjct: 216 GDTMP---CQNEEIIADHANVMVHESTYIEGDKSL--ANNYHHSHIEDVFTL 256

[Close]

BLAST of ClCG01G016500 vs. TrEMBL
Match: A0A0A0L1I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G228360 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.2e-125
Identity = 242/309 (78.32%), Postives = 254/309 (82.20%), Query Frame = 1


Query: 1   MAAETGC--SRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQK 60
           MAA T    S++LD +PME  KG+QIEGYPIKG SIGGHETC+IFPTLNLAFDIGRCPQK
Sbjct: 1   MAAGTASFSSKNLDSNPMEMSKGIQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQK 60

Query: 61  AISQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQS 120
           AISQ+FLFISHGHMDHIGGLPLYVATRGLYKM PPTIIVPKSIKNDVENLLEVHRRLDQS
Sbjct: 61  AISQDFLFISHGHMDHIGGLPLYVATRGLYKMGPPTIIVPKSIKNDVENLLEVHRRLDQS 120

Query: 121 ELRCNLIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKK 180
           ELRCNLIGLEVGEELSLRRDLKVRVF+TYHVIDSQGY+LYSVKQKLKK+YLGLSGNEIKK
Sbjct: 121 ELRCNLIGLEVGEELSLRRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKK 180

Query: 181 LRLSGVEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHARE 240
           LRLSGVE+T TITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRV VEHAR 
Sbjct: 181 LRLSGVEITYTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVKVEHAR- 240

Query: 241 YGHTHLFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLI 300
                                       Y  T           +IINHA+KFKNKAILLI
Sbjct: 241 ---------------------------EYGHTHLF--------EIINHAKKFKNKAILLI 273

Query: 301 HFSARYTAE 308
           HFSARYT E
Sbjct: 301 HFSARYTTE 273

[Close]

BLAST of ClCG01G016500 vs. TrEMBL
Match: G7K8Q5_MEDTR (Nuclear ribonuclease Z OS=Medicago truncatula GN=MTR_5g093920 PE=4 SV=2)

HSP 1 Score: 409.1 bits (1050), Expect = 5.2e-111
Identity = 204/328 (62.20%), Postives = 246/328 (75.00%), Query Frame = 1


Query: 4   ETGCSRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQN 63
           E G  +S + +  +  KG+ IEGY ++G SIGGHETCVIF    +AFDIGRCP +A+S +
Sbjct: 2   ELGTEKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSNFRVAFDIGRCPPRAVSMD 61

Query: 64  FLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCN 123
           FL ISH HMDHIGGLP+YVATRGLY+M+PPTIIVP S+K DVE L E+HR++DQSEL+ N
Sbjct: 62  FLLISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHN 121

Query: 124 LIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSG 183
           LIGL+VGEE SLR+DLKV+ F+TYHVI SQGY+LYSVK KLK EY+GLSG+EIKKL+ SG
Sbjct: 122 LIGLDVGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSG 181

Query: 184 VEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTH 243
           VE+TNT+ EPE+AFTGDT SDFI+DENN DVLRAK+LV+ESTF+ N +TVEHAR      
Sbjct: 182 VEITNTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHAR------ 241

Query: 244 LFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSAR 303
                                  Y  T          S+II++A+K +NKAILLIHFSAR
Sbjct: 242 ----------------------DYGHTHL--------SEIISYADKLQNKAILLIHFSAR 293

Query: 304 YTAEEIQQAIATLPPPLAGRVSALTEGF 332
           YT EEIQQA++ LPPPLAGR  ALTEGF
Sbjct: 302 YTVEEIQQAVSALPPPLAGRTFALTEGF 293

[Close]

BLAST of ClCG01G016500 vs. TrEMBL
Match: A0A072UGA0_MEDTR (Nuclear ribonuclease Z OS=Medicago truncatula GN=MTR_5g093920 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 5.2e-111
Identity = 204/328 (62.20%), Postives = 246/328 (75.00%), Query Frame = 1


Query: 4   ETGCSRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQN 63
           E G  +S + +  +  KG+ IEGY ++G SIGGHETCVIF    +AFDIGRCP +A+S +
Sbjct: 25  ELGTEKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSNFRVAFDIGRCPPRAVSMD 84

Query: 64  FLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCN 123
           FL ISH HMDHIGGLP+YVATRGLY+M+PPTIIVP S+K DVE L E+HR++DQSEL+ N
Sbjct: 85  FLLISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHN 144

Query: 124 LIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSG 183
           LIGL+VGEE SLR+DLKV+ F+TYHVI SQGY+LYSVK KLK EY+GLSG+EIKKL+ SG
Sbjct: 145 LIGLDVGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSG 204

Query: 184 VEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTH 243
           VE+TNT+ EPE+AFTGDT SDFI+DENN DVLRAK+LV+ESTF+ N +TVEHAR      
Sbjct: 205 VEITNTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHAR------ 264

Query: 244 LFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSAR 303
                                  Y  T          S+II++A+K +NKAILLIHFSAR
Sbjct: 265 ----------------------DYGHTHL--------SEIISYADKLQNKAILLIHFSAR 316

Query: 304 YTAEEIQQAIATLPPPLAGRVSALTEGF 332
           YT EEIQQA++ LPPPLAGR  ALTEGF
Sbjct: 325 YTVEEIQQAVSALPPPLAGRTFALTEGF 316

[Close]

BLAST of ClCG01G016500 vs. TrEMBL
Match: A0A0S3T161_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G018300 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 201/315 (63.81%), Postives = 241/315 (76.51%), Query Frame = 1


Query: 17  ETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIG 76
           +T K ++IEGYP+ G SIGGHETCV+FPTL +AFDIGRCP +A+SQNFL ISH HMDHIG
Sbjct: 22  KTAKDLEIEGYPVGGLSIGGHETCVLFPTLKIAFDIGRCPPRAVSQNFLLISHAHMDHIG 81

Query: 77  GLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLR 136
           GLP+YVATRGLY+M+PPTIIVP S+K DVE L E+HR++DQSEL  NLIGL+VGEE  LR
Sbjct: 82  GLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELNHNLIGLDVGEEFYLR 141

Query: 137 RDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVA 196
           +DLKV+ F+TYHVI SQGY++YSVKQKLK+EY+GLSGNEIK L+ SG ++T T+TEPE+A
Sbjct: 142 KDLKVKAFRTYHVIPSQGYIIYSVKQKLKQEYIGLSGNEIKNLKSSGEQITYTLTEPEIA 201

Query: 197 FTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNIVAPA 256
           FTGDT SDFI+DENN DVLRAKILV+E TF+ + +TVEHAR                   
Sbjct: 202 FTGDTMSDFIIDENNTDVLRAKILVLECTFVNDSMTVEHAR------------------- 261

Query: 257 IPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSARYTAEEIQQAIATL 316
                     Y  T          S+II+HAE+ +N+AILLIHFSARYT EEIQQA++ L
Sbjct: 262 ---------DYGHTHL--------SEIISHAERLQNRAILLIHFSARYTVEEIQQAVSAL 300

Query: 317 PPPLAGRVSALTEGF 332
           PP LAGR  ALTEGF
Sbjct: 322 PPSLAGRTYALTEGF 300

[Close]

BLAST of ClCG01G016500 vs. TrEMBL
Match: A0A067K4U7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11592 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.9e-109
Identity = 203/319 (63.64%), Postives = 243/319 (76.18%), Query Frame = 1


Query: 14  DPMETRKG-MQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHM 73
           D  E +K  + IEGYP++G SIGGHETC+IFP+LNLAFDIGRCPQ+A+SQ+FLFISH HM
Sbjct: 16  DKREAKKSVLTIEGYPVEGLSIGGHETCIIFPSLNLAFDIGRCPQRALSQDFLFISHAHM 75

Query: 74  DHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEE 133
           DHIGGLP+YVATRGLYKM+PPTIIVP SIK  V+ L EVHR+LD SEL   L+GL+VGEE
Sbjct: 76  DHIGGLPMYVATRGLYKMKPPTIIVPTSIKETVQELFEVHRKLDGSELNHTLVGLDVGEE 135

Query: 134 LSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITE 193
             +R+DLKV+ F+TYHV+ SQGYV+YS+KQKLK+EY GLSGNEIK L+ SGVE+TNT+T 
Sbjct: 136 FYMRKDLKVKAFRTYHVLKSQGYVVYSIKQKLKQEYFGLSGNEIKNLKASGVEITNTVTA 195

Query: 194 PEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNI 253
           PE+AFTGDT SDFI+DE N DVLRA+ILVMESTF+E+ V VEHAR               
Sbjct: 196 PEIAFTGDTMSDFIIDETNSDVLRARILVMESTFVEDTVKVEHAR--------------- 255

Query: 254 VAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSARYTAEEIQQA 313
                         Y  T          S+I+N+A++F+NKAILLIHFSARY  EEIQ+A
Sbjct: 256 -------------DYGHTHL--------SEIVNYADRFQNKAILLIHFSARYRVEEIQEA 298

Query: 314 IATLPPPLAGRVSALTEGF 332
           ++ LPP LAGRV ALTEGF
Sbjct: 316 VSRLPPSLAGRVFALTEGF 298

[Close]

BLAST of ClCG01G016500 vs. TAIR10
Match: AT1G74700.1 (AT1G74700.1 tRNAse Z1)

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-101
Identity = 170/232 (73.28%), Postives = 203/232 (87.50%), Query Frame = 1


Query: 16  METRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHI 75
           ME +K MQIEGYPI+G SIGGHETC+IFP+L +AFDIGRCP +AISQ+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 76  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 135
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 136 RRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEV 195
           R+DLKV+ FKT+HVI SQGYV+YS K KLKKEY+GLSGNEIK L++SGVE+T++I  PEV
Sbjct: 121 RKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEV 180

Query: 196 AFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEV 248
           AFTGDTTSDF+VDE N D L+AK+LVMESTFL++ V+VEHAR+YGH H+ E+
Sbjct: 181 AFTGDTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEI 232

HSP 2 Score: 277.3 bits (708), Expect = 1.2e-74
Identity = 163/324 (50.31%), Postives = 203/324 (62.65%), Query Frame = 1


Query: 16  METRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHI 75
           ME +K MQIEGYPI+G SIGGHETC+IFP+L +AFDIGRCP +AISQ+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 76  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSL 135
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++GEE  +
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII 120

Query: 136 RRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGN-EIKK--LRLSGVEVTNTITE 195
           R+DLKV+ FKT+HVI S             + Y+  S   ++KK  + LSG E+ N    
Sbjct: 121 RKDLKVKAFKTFHVIQS-------------QGYVVYSTKYKLKKEYIGLSGNEIKNL--- 180

Query: 196 PEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNI 255
                                    K+  +E T  ++ +T E A     T  F V   N 
Sbjct: 181 -------------------------KVSGVEIT--DSIITPEVAFTGDTTSDFVVDETNA 240

Query: 256 VAPAIPVFIQQLISYNFTSFCASCVADP-----SQIINHAEKFKNKAILLIHFSARYTAE 315
            A    V + +  ++   S       D      S+I+NHAEKF+NKAILLIHFSARYT +
Sbjct: 241 DALKAKVLVMES-TFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAILLIHFSARYTVK 280

Query: 316 EIQQAIATLPPPLAGRVSALTEGF 332
           EI+ A++ LPPPL GRV ALT+GF
Sbjct: 301 EIEDAVSALPPPLEGRVFALTQGF 280

[Close]

BLAST of ClCG01G016500 vs. TAIR10
Match: AT2G04530.1 (AT2G04530.1 Metallo-hydrolase/oxidoreductase superfamily protein)

HSP 1 Score: 296.2 bits (757), Expect = 2.5e-80
Identity = 136/229 (59.39%), Postives = 174/229 (75.98%), Query Frame = 1


Query: 19  RKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGL 78
           RKG+++E Y I+G S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 79  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 138
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 139 LKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVAFT 198
           + VR F T+HVI SQGYV+YSV++KL+K+Y  L G +I+K++ SGVE+T+TI  PE+AFT
Sbjct: 193 IVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFT 252

Query: 199 GDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEV 248
           GDTTS++++D  N D LRAK+L+ E+TFL+   + EHA+  GHTH+ ++
Sbjct: 253 GDTTSEYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQI 301

HSP 2 Score: 217.2 bits (552), Expect = 1.5e-56
Identity = 128/315 (40.63%), Postives = 176/315 (55.87%), Query Frame = 1


Query: 19  RKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHIGGL 78
           RKG+++E Y I+G S+GGHETCVI P L   FDIGRCP +AI Q FLFI+H H+DHIGGL
Sbjct: 73  RKGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGL 132

Query: 79  PLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVGEELSLRRD 138
           P+YVA+RGLY +EPP I VP SIK DVE LLE+HR + Q EL   LI L VGE   LR D
Sbjct: 133 PMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRND 192

Query: 139 LKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPEVAFT 198
           + VR F T+HVI SQGYV+Y               +  KKL+     +     E ++  +
Sbjct: 193 IVVRPFATHHVIPSQGYVIY---------------SVRKKLQKQYAHLKGKQIE-KIKKS 252

Query: 199 GDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNIVAPAIP 258
           G   +D I+                    E   T +   EY    + + R+ + +   + 
Sbjct: 253 GVEITDTILSP------------------EIAFTGDTTSEY----MLDPRNADALRAKVL 312

Query: 259 VFIQQLISYNFTSFCASCVADP--SQIINHAEKFKNKAILLIHFSARYTAEEIQQAIATL 318
           +     +  +F++  A  +     SQII +A+  ++K +LL HFS+RY  EEI++A+  L
Sbjct: 313 ITEATFLDESFSTEHAQALGHTHISQIIENAKWIRSKTVLLTHFSSRYHVEEIREAVLKL 349

Query: 319 PPPLAGRVSALTEGF 332
              ++ +V  LTEGF
Sbjct: 373 QSKVSAKVIPLTEGF 349

[Close]

BLAST of ClCG01G016500 vs. NCBI nr
Match: gi|778692615|ref|XP_011653492.1| (PREDICTED: nuclear ribonuclease Z [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 3.2e-138
Identity = 264/333 (79.28%), Postives = 278/333 (83.48%), Query Frame = 1


Query: 1   MAAETGC--SRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQK 60
           MAA T    S++LD +PME  KG+QIEGYPIKG SIGGHETC+IFPTLNLAFDIGRCPQK
Sbjct: 1   MAAGTASFSSKNLDSNPMEMSKGIQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQK 60

Query: 61  AISQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQS 120
           AISQ+FLFISHGHMDHIGGLPLYVATRGLYKM PPTIIVPKSIKNDVENLLEVHRRLDQS
Sbjct: 61  AISQDFLFISHGHMDHIGGLPLYVATRGLYKMGPPTIIVPKSIKNDVENLLEVHRRLDQS 120

Query: 121 ELRCNLIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKK 180
           ELRCNLIGLEVGEELSLRRDLKVRVF+TYHVIDSQGY+LYSVKQKLKK+YLGLSGNEIKK
Sbjct: 121 ELRCNLIGLEVGEELSLRRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKK 180

Query: 181 LRLSGVEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHARE 240
           LRLSGVE+T TITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRV VEHAR 
Sbjct: 181 LRLSGVEITYTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVKVEHAR- 240

Query: 241 YGHTHLFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLI 300
                                       Y  T           +IINHA+KFKNKAILLI
Sbjct: 241 ---------------------------EYGHTHLF--------EIINHAKKFKNKAILLI 297

Query: 301 HFSARYTAEEIQQAIATLPPPLAGRVSALTEGF 332
           HFSARYT EEIQ+AI+TLPPPLAGRVSALTEGF
Sbjct: 301 HFSARYTTEEIQEAISTLPPPLAGRVSALTEGF 297

[Close]

BLAST of ClCG01G016500 vs. NCBI nr
Match: gi|659115530|ref|XP_008457600.1| (PREDICTED: nuclear ribonuclease Z [Cucumis melo])

HSP 1 Score: 496.9 bits (1278), Expect = 2.7e-137
Identity = 263/333 (78.98%), Postives = 277/333 (83.18%), Query Frame = 1


Query: 1   MAAETG--CSRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQK 60
           MAA T    S++LD +PME  KG+QI GYPIKG SIGGHETCVIFPTLNLAFDIGRCPQK
Sbjct: 1   MAAGTANFSSKNLDSNPMEMSKGIQIAGYPIKGLSIGGHETCVIFPTLNLAFDIGRCPQK 60

Query: 61  AISQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQS 120
           AISQ+FLFISHGHMDHIGGLPLYVATRGLYKM PPTI+VPKSIKNDVENLLEVHRRLDQS
Sbjct: 61  AISQDFLFISHGHMDHIGGLPLYVATRGLYKMRPPTIVVPKSIKNDVENLLEVHRRLDQS 120

Query: 121 ELRCNLIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKK 180
           ELRCNLIGLEVGEELSLRRDLKVRVF+TYHVIDSQGY+LYSVKQKLKK+YLGLSGNEIKK
Sbjct: 121 ELRCNLIGLEVGEELSLRRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKK 180

Query: 181 LRLSGVEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHARE 240
           LRLSGVE+T TITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAR 
Sbjct: 181 LRLSGVEITYTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAR- 240

Query: 241 YGHTHLFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLI 300
                                       Y  T           +IINHA+KFKNKAILLI
Sbjct: 241 ---------------------------EYGHTHLF--------EIINHAKKFKNKAILLI 297

Query: 301 HFSARYTAEEIQQAIATLPPPLAGRVSALTEGF 332
           HFSARYT EEIQ+AI+TLPP LAGRVSALTEGF
Sbjct: 301 HFSARYTTEEIQEAISTLPPLLAGRVSALTEGF 297

[Close]

BLAST of ClCG01G016500 vs. NCBI nr
Match: gi|700198823|gb|KGN53981.1| (hypothetical protein Csa_4G228360 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 3.1e-125
Identity = 242/309 (78.32%), Postives = 254/309 (82.20%), Query Frame = 1


Query: 1   MAAETGC--SRSLDLDPMETRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQK 60
           MAA T    S++LD +PME  KG+QIEGYPIKG SIGGHETC+IFPTLNLAFDIGRCPQK
Sbjct: 1   MAAGTASFSSKNLDSNPMEMSKGIQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQK 60

Query: 61  AISQNFLFISHGHMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQS 120
           AISQ+FLFISHGHMDHIGGLPLYVATRGLYKM PPTIIVPKSIKNDVENLLEVHRRLDQS
Sbjct: 61  AISQDFLFISHGHMDHIGGLPLYVATRGLYKMGPPTIIVPKSIKNDVENLLEVHRRLDQS 120

Query: 121 ELRCNLIGLEVGEELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKK 180
           ELRCNLIGLEVGEELSLRRDLKVRVF+TYHVIDSQGY+LYSVKQKLKK+YLGLSGNEIKK
Sbjct: 121 ELRCNLIGLEVGEELSLRRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKK 180

Query: 181 LRLSGVEVTNTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHARE 240
           LRLSGVE+T TITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRV VEHAR 
Sbjct: 181 LRLSGVEITYTITEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVKVEHAR- 240

Query: 241 YGHTHLFEVRSLNIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLI 300
                                       Y  T           +IINHA+KFKNKAILLI
Sbjct: 241 ---------------------------EYGHTHLF--------EIINHAKKFKNKAILLI 273

Query: 301 HFSARYTAE 308
           HFSARYT E
Sbjct: 301 HFSARYTTE 273

[Close]

BLAST of ClCG01G016500 vs. NCBI nr
Match: gi|5882718|gb|AAD55271.1|AC008263_2 (ESTs gb|AA067482 and gb|AI100542 come from this gene [Arabidopsis thaliana])

HSP 1 Score: 424.1 bits (1089), Expect = 2.3e-115
Identity = 211/317 (66.56%), Postives = 254/317 (80.13%), Query Frame = 1


Query: 16  METRKGMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHGHMDHI 75
           ME +K MQIEGYPI+G SIGGHETC+IFP+L +AFDIGRCP +AISQ+FLFISH HMDHI
Sbjct: 1   MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Query: 76  GGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEV-GEELS 135
           GGLP+YVATRGLYKM+PPTIIVP SIK  VE+L EVHR+LD SEL+ NL+GL++ GEE  
Sbjct: 61  GGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGGEEFI 120

Query: 136 LRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTITEPE 195
           +R+DLKV+ FKT+HVI SQGYV+YS K KLKKEY+GLSGNEIK L++SGVE+T++I  PE
Sbjct: 121 IRKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPE 180

Query: 196 VAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSLNIVA 255
           VAFTGDTTSDF+VDE N D L+AK+LVMESTFL++ V+VEHAR+YGH H+ E  S     
Sbjct: 181 VAFTGDTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEKIS----- 240

Query: 256 PAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSARYTAEEIQQAIA 315
                +I +L                 QI+NHAEKF+NKAILLIHFSARYT +EI+ A++
Sbjct: 241 -----YILKL-----------------QIVNHAEKFENKAILLIHFSARYTVKEIEDAVS 290

Query: 316 TLPPPLAGRVSALTEGF 332
            LPPPL GRV ALT+GF
Sbjct: 301 ALPPPLEGRVFALTQGF 290

[Close]

BLAST of ClCG01G016500 vs. NCBI nr
Match: gi|1009125677|ref|XP_015879739.1| (PREDICTED: nuclear ribonuclease Z [Ziziphus jujuba])

HSP 1 Score: 416.8 bits (1070), Expect = 3.6e-113
Identity = 210/321 (65.42%), Postives = 252/321 (78.50%), Query Frame = 1


Query: 12  DLDPMETRK-GMQIEGYPIKGSSIGGHETCVIFPTLNLAFDIGRCPQKAISQNFLFISHG 71
           DLD    +  G+ IEGYP++G SIGGHETC+IFPTL LAFDIGRCPQ+AISQ+FLFISHG
Sbjct: 19  DLDQASRKNMGLNIEGYPVEGLSIGGHETCIIFPTLKLAFDIGRCPQRAISQDFLFISHG 78

Query: 72  HMDHIGGLPLYVATRGLYKMEPPTIIVPKSIKNDVENLLEVHRRLDQSELRCNLIGLEVG 131
           HMDHIGGLP+YVATRGLY M+PPTIIVP SIK DVE L EVHR++DQSEL  NLIGL+VG
Sbjct: 79  HMDHIGGLPMYVATRGLYGMKPPTIIVPTSIKEDVEKLFEVHRKMDQSELNHNLIGLDVG 138

Query: 132 EELSLRRDLKVRVFKTYHVIDSQGYVLYSVKQKLKKEYLGLSGNEIKKLRLSGVEVTNTI 191
           EEL +RRDLKV+ F+TYHVI SQGYV++SVKQKLK+EY+GLSGNEIK L+ SGVE+T T+
Sbjct: 139 EELQIRRDLKVQAFRTYHVIPSQGYVVFSVKQKLKQEYIGLSGNEIKSLKSSGVEITYTV 198

Query: 192 TEPEVAFTGDTTSDFIVDENNIDVLRAKILVMESTFLENRVTVEHAREYGHTHLFEVRSL 251
           TEP++AFTGDTT+DFIVD++NIDVLRAKILVMESTF+++ V+VEH+R             
Sbjct: 199 TEPQIAFTGDTTADFIVDKSNIDVLRAKILVMESTFVDDSVSVEHSR------------- 258

Query: 252 NIVAPAIPVFIQQLISYNFTSFCASCVADPSQIINHAEKFKNKAILLIHFSARYTAEEIQ 311
                           Y  T           +II+H +KF+NKAILLIHFSARY+ +EIQ
Sbjct: 259 ---------------EYGHTHL--------HEIISHKDKFENKAILLIHFSARYSVKEIQ 303

Query: 312 QAIATLPPPLAGRVSALTEGF 332
           +A++ LPPPLAGR+ ALTEGF
Sbjct: 319 EAVSALPPPLAGRIFALTEGF 303

The following BLAST results are available for this feature:

BLAST of ClCG01G016500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNZN_ARATH	3.5e-100	73.28	Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3	[more]
RNZC_ARATH	4.4e-79	59.39	Ribonuclease Z, chloroplastic OS=Arabidopsis thaliana GN=CPZ PE=2 SV=1	[more]
RNZN_WHEAT	1.7e-70	71.76	Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum GN=ELAC PE=1 SV=1	[more]
RNZ_SULTO	4.1e-08	26.63	Ribonuclease Z OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 10014...	[more]
RNZ_STAS1	1.0e-06	26.72	Ribonuclease Z OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC...	[more]

BLAST of ClCG01G016500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1I3_CUCSA	2.2e-125	78.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G228360 PE=4 SV=1	[more]
G7K8Q5_MEDTR	5.2e-111	62.20	Nuclear ribonuclease Z OS=Medicago truncatula GN=MTR_5g093920 PE=4 SV=2	[more]
A0A072UGA0_MEDTR	5.2e-111	62.20	Nuclear ribonuclease Z OS=Medicago truncatula GN=MTR_5g093920 PE=4 SV=1	[more]
A0A0S3T161_PHAAN	1.3e-109	63.81	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G018300 PE=...	[more]
A0A067K4U7_JATCU	4.9e-109	63.64	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11592 PE=4 SV=1	[more]

BLAST of ClCG01G016500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74700.1	2.0e-101	73.28	tRNAse Z1	[more]
AT2G04530.1	2.5e-80	59.39	Metallo-hydrolase/oxidoreductase superfamily protein	[more]

BLAST of ClCG01G016500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778692615\|ref\|XP_011653492.1\|	3.2e-138	79.28	PREDICTED: nuclear ribonuclease Z [Cucumis sativus]	[more]
gi\|659115530\|ref\|XP_008457600.1\|	2.7e-137	78.98	PREDICTED: nuclear ribonuclease Z [Cucumis melo]	[more]
gi\|700198823\|gb\|KGN53981.1\|	3.1e-125	78.32	hypothetical protein Csa_4G228360 [Cucumis sativus]	[more]
gi\|5882718\|gb\|AAD55271.1\|AC008263_2	2.3e-115	66.56	ESTs gb\|AA067482 and gb\|AI100542 come from this gene [Arabidopsis thaliana]	[more]
gi\|1009125677\|ref\|XP_015879739.1\|	3.6e-113	65.42	PREDICTED: nuclear ribonuclease Z [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001279	Metallo-B-lactamas

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0043687	post-translational protein modification
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0042781	3'-tRNA processing endoribonuclease activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G016500.1	ClCG01G016500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	GENE3D	G3DSA:3.60.15.10		coord: 31..243 score: 8.4E-35coord: 280..313 score: 8.4
IPR001279	Metallo-beta-lactamase	PFAM	PF12706	Lactamase_B_2	coord: 64..242 score: 2.
IPR001279	Metallo-beta-lactamase	unknown	SSF56281	Metallo-hydrolase/oxidoreductase	coord: 41..242 score: 6.29E-32coord: 279..312 score: 6.29
None	No IPR available	PANTHER	PTHR12553	RIBONUCLEASE Z	coord: 16..244 score: 3.7E-135coord: 281..331 score: 3.7E
None	No IPR available	PANTHER	PTHR12553:SF43	NUCLEAR RIBONUCLEASE Z	coord: 281..331 score: 3.7E-135coord: 16..244 score: 3.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G016500	Cla001803	Watermelon (97103) v1	wcgwmB141
ClCG01G016500	Cla97C01G015460	Watermelon (97103) v2	wcgwmbB089
ClCG01G016500	Bhi03G001493	Wax gourd	wcgwgoB228
ClCG01G016500	CmaCh03G010150	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G016500	CmoCh03G010180	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G016500	Lsi01G010240	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G016500	Cp4.1LG10g02920	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G016500	Carg00871	Silver-seed gourd	carwcgB0397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G016500	Cucumber (Gy14) v2	cgybwcgB114
ClCG01G016500	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G016500	Melon (DHL92) v3.6.1	medwcgB270
ClCG01G016500	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G016500	Silver-seed gourd	carwcgB0173
ClCG01G016500	Silver-seed gourd	carwcgB0778
ClCG01G016500	Silver-seed gourd	carwcgB0867
ClCG01G016500	Cucumber (Chinese Long) v3	cucwcgB132
ClCG01G016500	Cucumber (Chinese Long) v3	cucwcgB455
ClCG01G016500	Watermelon (97103) v2	wcgwmbB123
ClCG01G016500	Watermelon (97103) v2	wcgwmbB128
ClCG01G016500	Wax gourd	wcgwgoB221
ClCG01G016500	Watermelon (Charleston Gray)	wcgwcgB013
ClCG01G016500	Watermelon (Charleston Gray)	wcgwcgB086
ClCG01G016500	Watermelon (Charleston Gray)	wcgwcgB113
ClCG01G016500	Cucumber (Gy14) v1	cgywcgB134
ClCG01G016500	Cucumber (Gy14) v1	cgywcgB394
ClCG01G016500	Cucumber (Gy14) v1	cgywcgB404
ClCG01G016500	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G016500	Cucurbita maxima (Rimu)	cmawcgB694
ClCG01G016500	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G016500	Wild cucumber (PI 183967)	cpiwcgB124
ClCG01G016500	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G016500	Cucumber (Chinese Long) v2	cuwcgB538
ClCG01G016500	Cucumber (Chinese Long) v2	cuwcgB117
ClCG01G016500	Cucumber (Chinese Long) v2	cuwcgB118
ClCG01G016500	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G016500	Melon (DHL92) v3.5.1	mewcgB193
ClCG01G016500	Melon (DHL92) v3.5.1	mewcgB280
ClCG01G016500	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G016500	Watermelon (97103) v1	wcgwmB117
ClCG01G016500	Watermelon (97103) v1	wcgwmB121
ClCG01G016500	Watermelon (97103) v1	wcgwmB162
ClCG01G016500	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G016500	Bottle gourd (USVL1VR-Ls)	lsiwcgB090