ClCG01G013030 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G013030
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	26S proteasome complex subunit DSS1
Location	CG_Chr01 : 26148764 .. 26151618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTAAAAGCAAGTGAAAATCTATAGATTCGAACACGGCACCGCAGCCTCAGGGGTTTGACGTGATAATTAGGGCTAAAAGTTCTTCAGTTGGTTCGTCTTCTTACCCATCTCTCGTGTCTTCCACTAGAGTTCTCCACTTCCTAATAGAACGAAGGTAATGGTCTCTACTGTTCTTCTCTTAAATCTTAATCCATTTTCATTCTTTCAATTTTACGACTTCCTTGTGTCTAGATCTGTATCTTTCTCTGGAGCTCTTCAGTAATTTTATGAACGAAGAAGTATTCTATTCACTTCGCAACCTTTCGCGATTTTTGTGCGTCTTTGATTTTATTGCCGACTCTTTTGTGAGATTCTGCAAAATACTTGACCCACTCCGATCTTCATGGTTTGGTTTCTTGTGTGATTGGGATCTTAGATTGGAAAAGTTAGGGTTTCACTACATTGCTCTTTGTTATTTTAATGCTAAATTCAATTACATATTCGTCATTTAGAATGCAGTACAATATGACTTCTGATGTGAGTATATATTACTTGTTAACGTGATTATTGCTGAGTTTTGTTGAATACTACATCGGTTGACAGTTCAAACTTTGTGATGGCGACTGAATCCAAAACTGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGGTACAACTAATTGTTAATTATTATAAAAAAAGAAAAAAAAAAAAGAAATCATCCCCTTATTTGGAGTTCTTCGCTACTATTTCCAGTGTATACTTGTTTGTCATTTATGGTTGGTCGAGGTGGAATTACTTACTTGATGTTCCAGACAGAGAATGGGAATGGAATAAGGGTCTGCATAGTCCTATTACTGCCTTGGCGATAACTTTGAACTGCTGTAACAATAATAGCATCCTCTAATTTGGATCAGCATATCCTATATATTTCTTGTTCACCCATGACCACTATTTTATATTATTATCTCCATCTGATACTATTAGAATCACTTATGCCTTATGCTGAGCTGGAATTGCATTCCATACAATTATACTCATAATCATGATCAATTAAAGAAACTATTAGTTAGAGAGAAAAAGGGTCAGAGTTACATGTTTTTGGCTTTAGAGGAATACCCTTACTATCTCTGAGGTTGGTATTCTACTGTTAGGACTTGGGAAGTCTTTATGTACATTAAAGTTTGTATGATATTTGGGATGACGCCCATAAATTGAGAAGTTTTTTTTGATATTTGTATATTAATGTGCGCTCAAGAACATTAGGAGTTTTGGTTGTATATAAGAAAATTGGAGGGATGGTTTATTTATTTATTTTAAAATTTAAATAAAGTGAGAGAGAGAGAGACAAATCCTTTTGCAGTTCAACCATTTTGAATTACCGTAAATCAAATGGTGGATATGCATTGACCTTGATGTATTTAGGGAAGAAGTAGAAGTTTCTGTTAAGTAGGCCCCTACTTTTGCTGGTGGGGGGTGGTTTGCTCTGCTACTTGATTTGAATCCTCTCATGGGCAATGCGACAGTGTTTTGAGGAAGGAAATTAAAGTCTTGAGGCAAAGGATAAGGATGGTGTGTAACCATCATTCTGTGGTTTTCTGTTGATATGTTTCGATTTTAGCTGATATCTAGCTTGTCTCATCTGTCACAATCTGAACTTTTTTTACTATCTTGAACTCTTGAAGTGATGTATTAGCATATTAACACGAATGGATTGTTTCTTTTGTATCTCTTAGGAATCTTCTACTTCTTGCAATCAGAAAATCCCAACAAGAACTAGAAAAACATGGGAATAGCCTCACTGATCAATATATATATTCAACTAAGAATAAATTACACCAAATCAGGTCTCAAAATCAACATTAATAAGATGGAAAGAAAAGAGCAAAAGAAAATGATGACTCCCCAGCGCATTCGAGAGTGCCAGAATACTCTCCCAAACCTCAGCCTTCAGCCAAAATTTCCACACCCACAATAGAGCCTCCAAACCTCTACATAAACCCTTGCATTGGTCCTGACTTGCCATGTAACTAACTGTATGACTCCTCAACCCATTAACAAGAGTGAATTCTCCTTCTTTCCCCTTCTCTTATACCTATGGATGATAGGGCGCGTCACAGTGTCTTTACCACTTAAAAATGAACTCGTTAGAGAGAGCTTATGGTGGGGCTACTTGTTTGCTTTTTATTGTTTCTAGCAATTAATTACAGGGTCAATCATAAATGGGAGGACGCCATGACACTGCTGTATGAATTGTCCTATTAAATCGATTGTAATGGCAACCAGTAATTGGAGCTCATATCTCAGAGACGTTTCTCTCAGATGCTAGTGTAAAACTTGTTGTCATGGCTTCTTCTCCCCCTCTCTATCTGATGGAAAATGAATCTGCTTCATGTTCTTTATGGGTTTGATAGAAATTTGGTTCCATAGGGGATGCTAATCTAAACACTCTGTTACCATAGACATTTCTGATGTTATGAATGATCATATCAACTGCAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACACAGCAGTGGGAAGACGATTGGGACGATGATGATGTCAATGACGACTTCTCTTTGCAGCTTAGGAGAGAATTGGAGAGCAATGCCGAGAAGAAATGAGACGACTTTTTTTGGTCTTGTACGTGTTCATCTTCTAAGATCTATGTTTAACTAGGTCTTTTGTCCCCAATGTGGTTTTACACTGTTTGTCTTCTATCCTTGTACATGGTGCTATTATGAATATGCTTGGAAGCCTAAAACATTGTTGCCTTTTCAAATCAGATGATTGGAAAATTGTGAAACCTTTGCCCCTTGAGAAACCAG

mRNA sequence

AAAACTTAAAAGCAAGTGAAAATCTATAGATTCGAACACGGCACCGCAGCCTCAGGGGTTTGACGTGATAATTAGGGCTAAAAGTTCTTCAGTTGGTTCGTCTTCTTACCCATCTCTCGTGTCTTCCACTAGAGTTCTCCACTTCCTAATAGAACGAAGTTCAAACTTTGTGATGGCGACTGAATCCAAAACTGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACACAGCAGTGGGAAGACGATTGGGACGATGATGATGTCAATGACGACTTCTCTTTGCAGCTTAGGAGAGAATTGGAGAGCAATGCCGAGAAGAAATGAGACGACTTTTTTTGGTCTTGTACGTGTTCATCTTCTAAGATCTATGTTTAACTAGGTCTTTTGTCCCCAATGTGGTTTTACACTGTTTGTCTTCTATCCTTGTACATGGTGCTATTATGAATATGCTTGGAAGCCTAAAACATTGTTGCCTTTTCAAATCAGATGATTGGAAAATTGTGAAACCTTTGCCCCTTGAGAAACCAG

Coding sequence (CDS)

ATGGCGACTGAATCCAAAACTGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACACAGCAGTGGGAAGACGATTGGGACGATGATGATGTCAATGACGACTTCTCTTTGCAGCTTAGGAGAGAATTGGAGAGCAATGCCGAGAAGAAATGA

Protein sequence

MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

Homology

[Close]

BLAST of ClCG01G013030 vs. Swiss-Prot
Match: SEM11_ARATH (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.7e-26
Identity = 56/74 (75.68%), Postives = 61/74 (82.43%), Query Frame = 1


Query: 1  MATESKTATEEV-KIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 60
          MA E K AT EV K+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLRRELESNAEKK 74
           QLR+ELE+  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of ClCG01G013030 vs. Swiss-Prot
Match: SEM12_ARATH (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-25
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLRRELESNAEKK 74
          QL++ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of ClCG01G013030 vs. Swiss-Prot
Match: DSS1_BOVIN (26S proteasome complex subunit DSS1 OS=Bos taurus GN=SHFM1 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.3e-10
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 AEK 73
            K
Sbjct: 66 GYK 66

[Close]

BLAST of ClCG01G013030 vs. Swiss-Prot
Match: DSS1_HUMAN (26S proteasome complex subunit DSS1 OS=Homo sapiens GN=SHFM1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.3e-10
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 AEK 73
            K
Sbjct: 66 GYK 66

[Close]

BLAST of ClCG01G013030 vs. Swiss-Prot
Match: DSS1_MOUSE (26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.3e-10
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 AEK 73
            K
Sbjct: 66 GYK 66

[Close]

BLAST of ClCG01G013030 vs. TrEMBL
Match: A0A0A0LU33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046000 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QLRRELESN EKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]

BLAST of ClCG01G013030 vs. TrEMBL
Match: W9RJ80_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010934 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-30
Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K ATEE KIDLFEDDDEFEEFEIN+EWE KEEGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATEPKAATEEAKIDLFEDDDEFEEFEINQEWEDKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QLRRELE+N +KK
Sbjct: 61 QLRRELENNQDKK 73

[Close]

BLAST of ClCG01G013030 vs. TrEMBL
Match: A0A0B2P900_GLYSO (Putative 26S proteasome complex subunit sem1-1 OS=Glycine soja GN=glysoja_044941 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-30
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K ATE+VKIDLFEDDDEFEEFEINEEW+ KEEGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLRRELESNAEK 73
          QLRRELESN EK
Sbjct: 61 QLRRELESNTEK 72

[Close]

BLAST of ClCG01G013030 vs. TrEMBL
Match: C6T0E4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G181200 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-30
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K ATE+VKIDLFEDDDEFEEFEINEEW+ KEEGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLRRELESNAEK 73
          QLRRELESN EK
Sbjct: 61 QLRRELESNTEK 72

[Close]

BLAST of ClCG01G013030 vs. TrEMBL
Match: A0A0A0KIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-30
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K A+EEVK+DLFEDDDEFEEFEINEEWEVK EGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QL+RELE+NAEKK
Sbjct: 61 QLKRELENNAEKK 72

[Close]

BLAST of ClCG01G013030 vs. TAIR10
Match: AT5G45010.1 (AT5G45010.1 DSS1 homolog on chromosome V)

HSP 1 Score: 116.3 bits (290), Expect = 7.8e-27
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLRRELESNAEKK 74
          QL++ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of ClCG01G013030 vs. TAIR10
Match: AT1G64750.3 (AT1G64750.3 deletion of SUV3 suppressor 1(I))

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-21
Identity = 56/115 (48.70%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 1   MATESKTATEEV-KIDLFEDDDEFEEFEINE----------------------------- 60
           MA E K AT EV K+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK 74
                       +W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

[Close]

BLAST of ClCG01G013030 vs. NCBI nr
Match: gi|449469525|ref|XP_004152470.1| (PREDICTED: probable 26S proteasome complex subunit sem1-1 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QLRRELESN EKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]

BLAST of ClCG01G013030 vs. NCBI nr
Match: gi|702257149|ref|XP_010028198.1| (PREDICTED: probable 26S proteasome complex subunit sem1-1 [Eucalyptus grandis])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE+K ATEE K+DLFEDDDEFEEFEINEEWE KEEGK++TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATETKPATEEAKMDLFEDDDEFEEFEINEEWEDKEEGKDVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEK 73
          QLRRELE+NAEK
Sbjct: 61 QLRRELENNAEK 72

[Close]

BLAST of ClCG01G013030 vs. NCBI nr
Match: gi|703122731|ref|XP_010102642.1| (hypothetical protein L484_010934 [Morus notabilis])

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-30
Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K ATEE KIDLFEDDDEFEEFEIN+EWE KEEGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATEPKAATEEAKIDLFEDDDEFEEFEINQEWEDKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QLRRELE+N +KK
Sbjct: 61 QLRRELENNQDKK 73

[Close]

BLAST of ClCG01G013030 vs. NCBI nr
Match: gi|356508661|ref|XP_003523073.1| (PREDICTED: probable 26S proteasome complex subunit sem1-2 [Glycine max])

HSP 1 Score: 139.0 bits (349), Expect = 3.2e-30
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K ATE+VKIDLFEDDDEFEEFEINEEW+ KEEGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLRRELESNAEK 73
          QLRRELESN EK
Sbjct: 61 QLRRELESNTEK 72

[Close]

BLAST of ClCG01G013030 vs. NCBI nr
Match: gi|449452971|ref|XP_004144232.1| (PREDICTED: probable 26S proteasome complex subunit sem1-2 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.2e-30
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 1


Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K A+EEVK+DLFEDDDEFEEFEINEEWEVK EGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESNAEKK 74
          QL+RELE+NAEKK
Sbjct: 61 QLKRELENNAEKK 72

The following BLAST results are available for this feature:

BLAST of ClCG01G013030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SEM11_ARATH	3.7e-26	75.68	Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana GN=DSS1(I) PE=1...	[more]
SEM12_ARATH	1.4e-25	72.60	Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana GN=DSS1(V) PE=1 SV=...	[more]
DSS1_BOVIN	6.3e-10	50.79	26S proteasome complex subunit DSS1 OS=Bos taurus GN=SHFM1 PE=3 SV=1	[more]
DSS1_HUMAN	6.3e-10	50.79	26S proteasome complex subunit DSS1 OS=Homo sapiens GN=SHFM1 PE=1 SV=1	[more]
DSS1_MOUSE	6.3e-10	50.79	26S proteasome complex subunit DSS1 OS=Mus musculus GN=Shfm1 PE=3 SV=1	[more]

BLAST of ClCG01G013030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU33_CUCSA	5.7e-34	97.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046000 PE=4 SV=1	[more]
W9RJ80_9ROSA	1.3e-30	87.67	Uncharacterized protein OS=Morus notabilis GN=L484_010934 PE=4 SV=1	[more]
A0A0B2P900_GLYSO	2.2e-30	88.89	Putative 26S proteasome complex subunit sem1-1 OS=Glycine soja GN=glysoja_044941...	[more]
C6T0E4_SOYBN	2.2e-30	88.89	Uncharacterized protein OS=Glycine max GN=GLYMA_04G181200 PE=2 SV=1	[more]
A0A0A0KIG9_CUCSA	2.9e-30	90.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358050 PE=4 SV=1	[more]

BLAST of ClCG01G013030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45010.1	7.8e-27	72.60	DSS1 homolog on chromosome V	[more]
AT1G64750.3	2.2e-21	48.70	deletion of SUV3 suppressor 1(I)	[more]

BLAST of ClCG01G013030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469525\|ref\|XP_004152470.1\|	8.1e-34	97.26	PREDICTED: probable 26S proteasome complex subunit sem1-1 [Cucumis sativus]	[more]
gi\|702257149\|ref\|XP_010028198.1\|	1.4e-30	88.89	PREDICTED: probable 26S proteasome complex subunit sem1-1 [Eucalyptus grandis]	[more]
gi\|703122731\|ref\|XP_010102642.1\|	1.9e-30	87.67	hypothetical protein L484_010934 [Morus notabilis]	[more]
gi\|356508661\|ref\|XP_003523073.1\|	3.2e-30	88.89	PREDICTED: probable 26S proteasome complex subunit sem1-2 [Glycine max]	[more]
gi\|449452971\|ref\|XP_004144232.1\|	4.2e-30	90.41	PREDICTED: probable 26S proteasome complex subunit sem1-2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007834	DSS1_SEM1

Vocabulary: **Cellular Component**
Term	Definition
GO:0008541	proteasome regulatory particle, lid subcomplex

Vocabulary: **Biological Process**
Term	Definition
GO:0006406	mRNA export from nucleus
GO:0043248	proteasome assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G013030.1	ClCG01G013030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007834	DSS1/SEM1	PFAM	PF05160	DSS1_SEM1	coord: 10..67 score: 4.9
IPR007834	DSS1/SEM1	SMART	SM01385	DSS1_SEM1_2	coord: 9..68 score: 8.1
None	No IPR available	PANTHER	PTHR16771	26 PROTEASOME COMPLEX SUBUNIT DSS1	coord: 1..72 score: 3.3
None	No IPR available	PANTHER	PTHR16771:SF1	SUBFAMILY NOT NAMED	coord: 1..72 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G013030	Carg06717	Silver-seed gourd	carwcgB0477
ClCG01G013030	CsaV3_1G008390	Cucumber (Chinese Long) v3	cucwcgB014

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G013030	Cucumber (Chinese Long) v3	cucwcgB028
ClCG01G013030	Cucumber (Chinese Long) v3	cucwcgB400
ClCG01G013030	Watermelon (97103) v2	wcgwmbB089
ClCG01G013030	Watermelon (97103) v2	wcgwmbB113
ClCG01G013030	Watermelon (97103) v2	wcgwmbB126
ClCG01G013030	Wax gourd	wcgwgoB231
ClCG01G013030	Wax gourd	wcgwgoB247
ClCG01G013030	Wax gourd	wcgwgoB255
ClCG01G013030	Watermelon (Charleston Gray)	wcgwcgB011
ClCG01G013030	Watermelon (Charleston Gray)	wcgwcgB096
ClCG01G013030	Watermelon (Charleston Gray)	wcgwcgB104
ClCG01G013030	Cucumber (Gy14) v1	cgywcgB124
ClCG01G013030	Cucumber (Gy14) v1	cgywcgB361
ClCG01G013030	Cucumber (Gy14) v1	cgywcgB493
ClCG01G013030	Cucurbita maxima (Rimu)	cmawcgB050
ClCG01G013030	Cucurbita maxima (Rimu)	cmawcgB095
ClCG01G013030	Cucurbita maxima (Rimu)	cmawcgB187
ClCG01G013030	Cucurbita maxima (Rimu)	cmawcgB343
ClCG01G013030	Cucurbita moschata (Rifu)	cmowcgB041
ClCG01G013030	Cucurbita moschata (Rifu)	cmowcgB087
ClCG01G013030	Cucurbita moschata (Rifu)	cmowcgB178
ClCG01G013030	Wild cucumber (PI 183967)	cpiwcgB015
ClCG01G013030	Wild cucumber (PI 183967)	cpiwcgB029
ClCG01G013030	Wild cucumber (PI 183967)	cpiwcgB395
ClCG01G013030	Wild cucumber (PI 183967)	cpiwcgB396
ClCG01G013030	Cucumber (Chinese Long) v2	cuwcgB013
ClCG01G013030	Cucumber (Chinese Long) v2	cuwcgB026
ClCG01G013030	Cucumber (Chinese Long) v2	cuwcgB378
ClCG01G013030	Melon (DHL92) v3.5.1	mewcgB017
ClCG01G013030	Melon (DHL92) v3.5.1	mewcgB053
ClCG01G013030	Melon (DHL92) v3.5.1	mewcgB139
ClCG01G013030	Melon (DHL92) v3.5.1	mewcgB235
ClCG01G013030	Watermelon (97103) v1	wcgwmB132
ClCG01G013030	Watermelon (97103) v1	wcgwmB147
ClCG01G013030	Watermelon (97103) v1	wcgwmB169
ClCG01G013030	Cucurbita pepo (Zucchini)	cpewcgB026
ClCG01G013030	Cucurbita pepo (Zucchini)	cpewcgB452
ClCG01G013030	Bottle gourd (USVL1VR-Ls)	lsiwcgB171
ClCG01G013030	Bottle gourd (USVL1VR-Ls)	lsiwcgB269
ClCG01G013030	Bottle gourd (USVL1VR-Ls)	lsiwcgB357
ClCG01G013030	Cucumber (Gy14) v2	cgybwcgB012
ClCG01G013030	Cucumber (Gy14) v2	cgybwcgB025
ClCG01G013030	Cucumber (Gy14) v2	cgybwcgB345
ClCG01G013030	Melon (DHL92) v3.6.1	medwcgB052
ClCG01G013030	Melon (DHL92) v3.6.1	medwcgB134
ClCG01G013030	Melon (DHL92) v3.6.1	medwcgB226
ClCG01G013030	Silver-seed gourd	carwcgB0355
ClCG01G013030	Silver-seed gourd	carwcgB0978