ClCG01G010800 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTGAAGAATCGAGTGCCTGAAACAGTGCCACGCCTCAGTTCGTCTTCTTTCTCCATCATCCACCAACCCAATTACTCAATTCCATCTGTTTCTCCTTCAATTCACTTTTTAAATTTCATTTCTCAGCCCCCAGTTTCAATCCTCCACTCTGCAAAATGCCAATCATGAAGCCTTCTTTCGACCCCACCATCGTCATCGACCGCCTCCGATTCACTTACCCTGGAATCGACGGCCACCCTCCTCCCGGTTCCAACCCCCTTATCCAAGATTTCTCCCTCACCCTCAACGCTGGTGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGTGAGTCCCCGTTGTAAATAATTCTCTTCAAATGCTGGACCAAATTTTGAGGGGTTTTTGTTAAAAGTTTTTGAGATTTGTTGTTGATCACAGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAGCCTCATATGGTTCGTGTGCTTGGAAGGTCGGCTTTTCATGATACTGCTTTGACTGTTTCTGGTGATCTTTGTTATCTAGGAGGAGAGGTTCATTTTATTCTTTCTCCGTTTTTCTTTTCTTTTTGTTATTTGATCTTATTGCTATTTGTTTCTCTGTGTTTTCTGTAGCTGATTGTGGAATCCAGAAATGTTGGAATGTATTTTAAATCTCGTTTTTTTTATGCTTTGGAACAAGAAAGATTTGTAGGAATGTAATGGAAAAATTTTGTGGATCATAAGAATTTTACTAGAGTAGCTCTTTCGTCATAATTTGTTAGACGATTTATCATTACCCATCTGCTTAAGCCTTCAAATCAATCCACGATTTAAGAGTAGGTGATCTAGGGATATCTGCTGTTCGTACCCCTGCAATGCTAATTTCTTCTCCGATTAATGTTGATTAACGTTGATTTCCAATGTTGAGTCTTCTACCTATTTCAAGCTCACAAGTGGAGAAAAATGTTAGATGATATAATATTTAATTTATTTTCACCCATCCACTTAAATTTTTGGTTCTACCGGCGATTTAAAGATAATTTGTCAATGGCAAGTTCATTAGCCATTAACTTTGAAACCATACAAAATTTGACCATTTCTGTCTGAAATGCTTTTGAAGTAATAACATAGCTACGACTGTGTTGGTGTTAAATATAGGTGGTTGCTTTCTGAGTTTATTGGCAATAACAGCTTGATTTTGAGGAATTGTTATCAATTTTGCCTGCATTTCTATTGATTTTTCGTGCCTTGAACTCTTTTCTTGCTTTACTCCAAAATTATGTGCTCTGTTCGTCTAACTGTTATCTTTCCAAATTTTGTATCAAATGAACCTTATTGTGGCTGAACATGAATGTCCAAGTCTAGTACCATTTTTTTTTTTTTTCCTTTTTCCTATTTGCTTGTGTGAATGAAAAAGACAGCGAAAATTCTGATGAGCCCTTTTCTGCAGTGGAGGAGAGACGTGGCCTTTGCTGGATTTGAGGTTCCCATTCAAATGGCTGTATCTGCAGAGAAACTAATTTTTGGAGTAGGTGGGGTTGATCCGAAAAGGAGAGATGAACTCATTAATGTGAGATGGTCTTACAATTGCATGCTTCACTTCTGTAAACTTAGATTTCTTGGCTCCCATATTGTCTTCTTCAAGACGGTTGTGCTAAAATCATCCATCATTCAGAAGCAAATTCCAGATTGCGCTGTTTTTTTCTTGATATATTCATCTTTAGTGAATTAATGGTTCCCATAAAGTTTAAGCATGAATGCCAATTTCTTCCTGTCAGCTCACAACTTTTTCTTTTTCTCTTTCTTTTTTGGCTCCCTAGATTCTAGACATTGATCTATCATGGAAGATGCACAAGGTGTCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTCAAGGCATACAAGGTATTTTACTTTTTCTTCTCCTACCTTATCACACATTTCTTACAGTTCCCTTACATTTTAGGATCTTGTTATTATAATTACATGGAAGCACATTTATTATTATAATAGGGTTACCTTTTTATTATTATTATTATTATTTTTCCCCCTAATGAAATATTGATTTTGCAATGTTATATAGTTAAACAAAGTTGATTTTGCTCTTTTCTTTCTAGGTTCTTCTTCTTGATGAGATAACTGTGGATCTTGACGTGCTAGCAAGGGCTAACCTCTTGAAGTTTCTGAGAAGGGAATGTGAGGAACGAGGGGCTACAGTAATCTACGCCACACATATATTTGATGGTCTTGAAGATTGGCCATCACACATGGTATGCTTAGTTCTTCTGTTTTTCTTGTCTCCCTACAGCTTTTGATGTTATATTATTTTTAAAAGACTACTACGTTGTTGTGGTAGGTCTATGTGTCGCATGGGAAGTTGCAGATATCCATGCCAATGGATAAAATTAAAGAGATCAGCAAATTATCTCTTATGGTTAGTACAGAAAACTGAACGAATTTAACAAAAGTGTTACATTCATTTAAATTTTAGCTTCTAACAATGTCTTGTTAAATTTTACTCTCAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGGGATGAGGAGCGACAGAGGAGGAGGGAAAGAAAGGCAAATGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACTGGGGACCCAGCCCGCTCTGCTGTTCGAGTAATAAACAATGGTTGGGCAGCAGGACGGCTTAACTCCACAGTTGCCGGAGAAGAGAACTTCTTGTTCAGCTCAAACAGAGTTCTCAGGCAGTAAGAAGTCTTCCTTTTCTCTTTGAAAAATTTAGAGAAAGAGCCAGAAAAGGCTCAAAGCCTATCATAATAGTCAGACGTGAAACAAAATTCATGGAAGATTTAATTTCTATACCTATTTTGGAGCTCTTATTTTATTTTATTTATTATTATTTTTAGTAAAATCTTTGTTTTGATTCATGATATAGATTTTTATACAATATTACCTTGAATAGCAAGTGATCTTGTTAGATCCAGTGCTGTAGAATTGCTATTAAATGAAGAAAATTTATTCTTATGAAGTTGAATGC GGTTGAAGAATCGAGTGCCTGAAACAGTGCCACGCCTCAGTTCGTCTTCTTTCTCCATCATCCACCAACCCAATTACTCAATTCCATCTGTTTCTCCTTCAATTCACTTTTTAAATTTCATTTCTCAGCCCCCAGTTTCAATCCTCCACTCTGCAAAATGCCAATCATGAAGCCTTCTTTCGACCCCACCATCGTCATCGACCGCCTCCGATTCACTTACCCTGGAATCGACGGCCACCCTCCTCCCGGTTCCAACCCCCTTATCCAAGATTTCTCCCTCACCCTCAACGCTGGTGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAGCCTCATATGGTTCGTGTGCTTGGAAGGTCGGCTTTTCATGATACTGCTTTGACTGTTTCTGGTGATCTTTGTTATCTAGGAGGAGAGATTCTAGACATTGATCTATCATGGAAGATGCACAAGGTGTCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTCAAGGCATACAAGGTTCTTCTTCTTGATGAGATAACTGTGGATCTTGACGTGCTAGCAAGGGCTAACCTCTTGAAGTTTCTGAGAAGGGAATGTGAGGAACGAGGGGCTACAGTAATCTACGCCACACATATATTTGATGGTCTTGAAGATTGGCCATCACACATGGTCTATGTGTCGCATGGGAAGTTGCAGATATCCATGCCAATGGATAAAATTAAAGAGATCAGCAAATTATCTCTTATGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGGGATGAGGAGCGACAGAGGAGGAGGGAAAGAAAGGCAAATGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACTGGGGACCCAGCCCGCTCTGCTGTTCGAGTAATAAACAATGGTTGGGCAGCAGGACGGCTTAACTCCACAGTTGCCGGAGAAGAGAACTTCTTGTTCAGCTCAAACAGAGTTCTCAGGCAGTAAGAAGTCTTCCTTTTCTCTTTGAAAAATTTAGAGAAAGAGCCAGAAAAGGCTCAAAGCCTATCATAATAGTCAGACGTGAAACAAAATTCATGGAAGATTTAATTTCTATACCTATTTTGGAGCTCTTATTTTATTTTATTTATTATTATTTTTAGTAAAATCTTTGTTTTGATTCATGATATAGATTTTTATACAATATTACCTTGAATAGCAAGTGATCTTGTTAGATCCAGTGCTGTAGAATTGCTATTAAATGAAGAAAATTTATTCTTATGAAGTTGAATGC ATGCCAATCATGAAGCCTTCTTTCGACCCCACCATCGTCATCGACCGCCTCCGATTCACTTACCCTGGAATCGACGGCCACCCTCCTCCCGGTTCCAACCCCCTTATCCAAGATTTCTCCCTCACCCTCAACGCTGGTGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAGCCTCATATGGTTCGTGTGCTTGGAAGGTCGGCTTTTCATGATACTGCTTTGACTGTTTCTGGTGATCTTTGTTATCTAGGAGGAGAGATTCTAGACATTGATCTATCATGGAAGATGCACAAGGTGTCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTCAAGGCATACAAGGTTCTTCTTCTTGATGAGATAACTGTGGATCTTGACGTGCTAGCAAGGGCTAACCTCTTGAAGTTTCTGAGAAGGGAATGTGAGGAACGAGGGGCTACAGTAATCTACGCCACACATATATTTGATGGTCTTGAAGATTGGCCATCACACATGGTCTATGTGTCGCATGGGAAGTTGCAGATATCCATGCCAATGGATAAAATTAAAGAGATCAGCAAATTATCTCTTATGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGGGATGAGGAGCGACAGAGGAGGAGGGAAAGAAAGGCAAATGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACTGGGGACCCAGCCCGCTCTGCTGTTCGAGTAATAAACAATGGTTGGGCAGCAGGACGGCTTAACTCCACAGTTGCCGGAGAAGAGAACTTCTTGTTCAGCTCAAACAGAGTTCTCAGGCAGTAA MPIMKPSFDPTIVIDRLRFTYPGIDGHPPPGSNPLIQDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVDLDVLARANLLKFLRRECEERGATVIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKEISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNGWAAGRLNSTVAGEENFLFSSNRVLRQ
BLAST of ClCG01G010800 vs. Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 1.8e-129 Identity = 234/320 (73.12%), Postives = 260/320 (81.25%), Query Frame = 1
BLAST of ClCG01G010800 vs. Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G4.01 PE=3 SV=2) HSP 1 Score: 179.9 bits (455), Expect = 4.1e-44 Identity = 97/231 (41.99%), Postives = 141/231 (61.04%), Query Frame = 1
BLAST of ClCG01G010800 vs. Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.1e-41 Identity = 77/131 (58.78%), Postives = 107/131 (81.68%), Query Frame = 1
HSP 2 Score: 94.0 bits (232), Expect = 2.9e-18 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 1
BLAST of ClCG01G010800 vs. Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.4e-38 Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 1
HSP 2 Score: 94.7 bits (234), Expect = 1.7e-18 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 1
BLAST of ClCG01G010800 vs. Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAF16 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.3e-29 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 1
HSP 2 Score: 47.8 bits (112), Expect = 2.4e-04 Identity = 24/64 (37.50%), Postives = 35/64 (54.69%), Query Frame = 1
BLAST of ClCG01G010800 vs. TrEMBL
Match: A0A0A0LTD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181360 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 8.6e-142 Identity = 267/325 (82.15%), Postives = 272/325 (83.69%), Query Frame = 1
BLAST of ClCG01G010800 vs. TrEMBL
Match: A0A061ER40_THECC (Non-intrinsic ABC protein 9 OS=Theobroma cacao GN=TCM_021928 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.0e-134 Identity = 244/324 (75.31%), Postives = 268/324 (82.72%), Query Frame = 1
BLAST of ClCG01G010800 vs. TrEMBL
Match: A0A0B0Q0Q1_GOSAR (ABC transporter I family member 20 OS=Gossypium arboreum GN=F383_02654 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 7.3e-133 Identity = 244/330 (73.94%), Postives = 267/330 (80.91%), Query Frame = 1
BLAST of ClCG01G010800 vs. TrEMBL
Match: A0A097P9U5_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI20 PE=2 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 4.7e-132 Identity = 239/322 (74.22%), Postives = 266/322 (82.61%), Query Frame = 1
BLAST of ClCG01G010800 vs. TrEMBL
Match: A0A0B2Q899_GLYSO (ABC transporter I family member 20 OS=Glycine soja GN=glysoja_012013 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 1.1e-131 Identity = 239/320 (74.69%), Postives = 267/320 (83.44%), Query Frame = 1
BLAST of ClCG01G010800 vs. TAIR10
Match: AT5G02270.2 (AT5G02270.2 non-intrinsic ABC protein 9) HSP 1 Score: 314.3 bits (804), Expect = 7.8e-86 Identity = 153/188 (81.38%), Postives = 175/188 (93.09%), Query Frame = 1
HSP 2 Score: 173.3 bits (438), Expect = 2.1e-43 Identity = 81/92 (88.04%), Postives = 83/92 (90.22%), Query Frame = 1
BLAST of ClCG01G010800 vs. TAIR10
Match: AT5G44110.1 (AT5G44110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 171.8 bits (434), Expect = 6.2e-43 Identity = 77/131 (58.78%), Postives = 107/131 (81.68%), Query Frame = 1
HSP 2 Score: 94.0 bits (232), Expect = 1.7e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 1
BLAST of ClCG01G010800 vs. TAIR10
Match: AT1G03905.1 (AT1G03905.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 159.1 bits (401), Expect = 4.2e-39 Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 1
HSP 2 Score: 94.7 bits (234), Expect = 9.7e-20 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 1
BLAST of ClCG01G010800 vs. TAIR10
Match: AT4G33460.1 (AT4G33460.1 ABC transporter family protein) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 50/193 (25.91%), Postives = 92/193 (47.67%), Query Frame = 1
BLAST of ClCG01G010800 vs. TAIR10
Match: AT2G36910.1 (AT2G36910.1 ATP binding cassette subfamily B1) HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06 Identity = 53/215 (24.65%), Postives = 81/215 (37.67%), Query Frame = 1
HSP 2 Score: 32.7 bits (73), Expect = 4.5e-01 Identity = 15/46 (32.61%), Postives = 29/46 (63.04%), Query Frame = 1
HSP 3 Score: 31.6 bits (70), Expect = 1.0e+00 Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 1
BLAST of ClCG01G010800 vs. NCBI nr
Match: gi|659127235|ref|XP_008463597.1| (PREDICTED: ABC transporter I family member 20 isoform X2 [Cucumis melo]) HSP 1 Score: 511.5 bits (1316), Expect = 9.4e-142 Identity = 267/325 (82.15%), Postives = 273/325 (84.00%), Query Frame = 1
BLAST of ClCG01G010800 vs. NCBI nr
Match: gi|449443522|ref|XP_004139526.1| (PREDICTED: ABC transporter I family member 20 [Cucumis sativus]) HSP 1 Score: 511.1 bits (1315), Expect = 1.2e-141 Identity = 267/325 (82.15%), Postives = 272/325 (83.69%), Query Frame = 1
BLAST of ClCG01G010800 vs. NCBI nr
Match: gi|659127233|ref|XP_008463596.1| (PREDICTED: ABC transporter I family member 20 isoform X1 [Cucumis melo]) HSP 1 Score: 505.0 bits (1299), Expect = 8.8e-140 Identity = 267/331 (80.66%), Postives = 273/331 (82.48%), Query Frame = 1
BLAST of ClCG01G010800 vs. NCBI nr
Match: gi|590629520|ref|XP_007027013.1| (Non-intrinsic ABC protein 9 [Theobroma cacao]) HSP 1 Score: 486.1 bits (1250), Expect = 4.2e-134 Identity = 244/324 (75.31%), Postives = 268/324 (82.72%), Query Frame = 1
BLAST of ClCG01G010800 vs. NCBI nr
Match: gi|728851319|gb|KHG30762.1| (ABC transporter I family member 20 [Gossypium arboreum]) HSP 1 Score: 481.5 bits (1238), Expect = 1.0e-132 Identity = 244/330 (73.94%), Postives = 267/330 (80.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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