Carg27416 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27416
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ABC transporter I family protein
Location	Cucurbita_argyrosperma_scaffold_413 : 109805 .. 113568 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGCAATGGCGGTGCCACTTCTGAAACAATGCAAAATGCACGCGGAATGGGCACTTCGTGTCATCTGGAAGAATCGAGTGCCTGAAACAATGCCACGCCTCACTTCGTGTTCTTTCTCCATCTCCCACCCACCGAATTACTCAAATTCAACTGTTTCTCCTTCAATCCCTCTTTTATACTCCATTTCTCTGCTCCTAATTCCTATCCTACACTCTGCAAAATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGTGAGTCCCCGTTGTAGATCTCTTAAAATGTCGAACCAAATATCTAGGGGATTTTTGTTTACTCTTTTGAAATGTAATGTTGTTGACAGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGGTTCATCCTCTTTCTTTCTTCTTCCTTTCTTTTCGTTTCTTTGTTCTTGTTGCTCTTTGTTTCTCTCTGTGTTTTCTGAATCTGTTGGTCATTGATCTTGCTTGCCTTCAATTTCGTTCGTTTCCACCATGATTGAATACGGCATTGTTCTTAGAGGACTGATTTAAATCTCTTGATTTGAGGAACTAGAAATGATTTCTTTGTGTTCTGCTTTGCTTGGAATGGGATAAGATTTGTTGTTTTGTTTTTGTTTTGTGGATCATGAGGATCTTTTCTAGTGTAGCTCTCTGATCATGATTTGTGCATAGGAACATTGTTGAACATTGTTGTCTGAAATGCAAAGGAATTCATTTAAATTCTGATAACTGAAAATTACAGGGTGTTCTTGCTTGTATACACTGTGTTGGTGTTAAATCTAGGCAGTCGTTTTTCGAGTTTATTGCGTTTACGAAGCAATAACCAGCTTGATTTTGAGAAATTCTTATAAATCTTGTTTGCATGTTCTTCATTTTTTTTTTGTATCTGCTTATGTGAATAGAAAAGATACTGAAAATGCTGACGATCCCTTTCCTGCAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATGTAAGGTGGTCTGATAATCTCATGCTTCTGTTATGTGAACTTAACCTTCTTAGCTTGTATTGCCCTCTGCTGTACTATAATGGATGTGTAGCAACCCAAGCCCACCCGCTAGGCTAGCAGATATTGTTCTCTTTGAGCTTTCCCTTTTGAGTTTCCCTTTAAGGTTTTTAAAATGTGTCGGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTTGTTCCCCTCTCTAATCGATGCGGGATCTTACAATCCACCCTTCTTCGGGGCCCAGCGTCCTCGTTGGCACTCCTACCCCTCAAAAATCATGTCAATCCACCCTCTTTAGGGCCCAGCGTCCTTGTTGGTACTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCTTTTCAGGGCCAAGCGTCCTCGCTGGTCCTCATTTCTCTCTCCAATTGATGTGGGATCTCATAATCCATCCCCTTCAGGGCCAAGCGTCCTCGCTGGTCCTCATTTCTCTCTCCAATTGATGTGGGATCTCATAATCCACCCCCTTTCAGGGCCAAGCGTCCTCGCTGGCCTTCGTTCTTCCCTCCAATCGATGTGGGATCTCACAATCCACCCCCTTTTCGCTGGCCCTCGTTTCTCTCTCCAATCAATGTGGGATCTCACAATCCACCCTCCTCGGGGGCCAAGTGTCCTCGTTGGTCCTCGTTTCTCTCTCTCCAATTGATGTGGGATCTCACAATCCACCCCCTTTCAAGGCCAAATGTCCTCGTTGATACTCATTTCCCTCTCCAATCGATGTGAGGTCTCACAATCCACCTCCTTTAGGGCCAAGCGTTCTTGTTGACACATTGCCCAGTGTCTGGCTCTGATACCCTTTGTAACATCCCAATGGGGAAGCCCGAAAGGGAAAACACAAAGAGGACAATATCGGCTATTGGTGGGCTTGGGCCATTACAAAATGTTCTCATAAATAATGTCAATGTCAGTCTGTCAGCTCACAACTCCTTTTCTTGTTTTGGGACTTCAGATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGGTATTTTATCATTTTTTCTTGTGAAATATTGATATTTTTATATTTGAAAACGAAGTTGATTGTTCTCTTTTCCTCTTAGGTTCTTCTTCTTGATGAGATAACTGTGGATCTTGACGTGCTGGCAAGGGCGAACCTTTTGAAGTTTCTGAGAAGGGAATGTGAAGAGCGTGGCGCTACAATTATCTACGCCACACATATATTTGATGGTCTCGAAGACTGGCCATCACATATGGTATGCTCAATTCTTTTGTTTGTCTTCTCTCTCTATTTGAGATCCCACCTCGGTTGAGGAGGTGAACGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCATAGTAGGATGCGTTTTAAAAACTTGGAGGGTAGCCCAAAAGGGAAAGCTCAAAGAGAATAATATCTGCTAACGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGGGTGATGTGCCAGCGAGAAAAGCCTCGAAGGGGGGTGGACATGAGGCGGTGTGCCACCAAGGACGCTAGGCCCCAAAGGGAGTGGATTGTGAGACCCCACATTGGTTGAGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCACCTGGTGGACGCGTTTTAAAAACCTTGAGGGGATGCTTGCAAGGAAAAGCTCAAAAAGAACCATATCTGTTAGTGGTTAGCGGTCAGCTTGAGCGGTTACCTTCTAAGTCTTTGTTTTGCTTTGGTAGGTCTATGTGTCGCATGGGAAGTTGCAGATCTCAATGCCAATGGATAAAATTAAGGAGATTAGCCAGTTGTCTCTTATGGTAAGTTTTTACAACATGGAATCCTTATTTCCGTCGAATTGAAAGACCGAACAAATTTCAAATGTTCTTTATTTTCGTTATTTCGAAACTCTCAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAAGAGTGTTCCTTTACTCTTTGCAATGTTTAGTAAAAGAAGTAGATAAGGCTCAAACAAAATTCATGGAAGCATTTTAGTTTCCTTGCGTATTTACAGGGTGCTCTTATGATATCGATTTCTATAGCAAGTCATCTTGTTAGATTAGACCCACTGTTTTTGAATTGCTATTAAATGAAGAAAATTTGTTGTATTATG

mRNA sequence

CAAAAGCAATGGCGCTGGAAGAATCGAGTGCCTGAAACAATGCCACGCCTCACTTCGTGTTCTTTCTCCATCTCCCACCCACCGAATTACTCAAATTCAACTGTTTCTCCTTCAATCCCTCTTTTATACTCCATTTCTCTGCTCCTAATTCCTATCCTACACTCTGCAAAATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAAGAGTGTTCCTTTACTCTTTGCAATGTTTAGTAAAAGAAGTAGATAAGGCTCAAACAAAATTCATGGAAGCATTTTAGTTTCCTTGCGTATTTACAGGGTGCTCTTATGATATCGATTTCTATAGCAAGTCATCTTGTTAGATTAGACCCACTGTTTTTGAATTGCTATTAAATGAAGAAAATTTGTTGTATTATG

Coding sequence (CDS)

ATGCCTACCACGATGCCTGGTTCCTCTCCCACCATCGTCATCGACGCCCTCCGATTCACCTACCCTGGAATCGACGGCCATCCTCCGCCTGGTTCCAAGCCCCTCATCGATGATTTCTCCCTCACTCTCAACGCTGGCGATCGTTGCCTTCTTGTCGGATCCAATGGCGCTGGGAAGACCACGATCTTGAAGATTTTGGGAGGGAAGCATATGGTGGAACCTCATATGGTTCGTGTGCTTGGAAGATCGGCGTTTCACGATACTGCTTTGACTGTTTCTGGCGATCTCTGTTATCTAGGAGGAGAGTGGAGGAGAGATGTGGCGTTTGCAGGATTTGAGGTTCCCATTCAAATGGCTGTGTCTGCAGAGAAGCTAATTTTTGGAGTAGGCGGGGTTGATCCTCAAAGGAGAGCTGAACTCATTAATATATTAGACATTGATTTATCATGGACGATGCACAAGGTATCTGATGGTCAGAGAAGACGGGTGCAAATATGCATGGGTCTTCTGAAGGCATATAAGAGAACAGTTGAGAGTTGGCTAAGGAAGGAGCGAGACGAGGAGAGGAAAAAGAGGAGGGAAAGAAAGGCAAGTGGTCTGCCTGAATTTGAAGAAAGAATAGAGGAAAGCCGTGTGACGGGGGATCCAGCCCGCGCTGCTGTTCGAGTCATGAACAACGGCTGGGCAGCAGGACGGCTTCACTCCACCGTAGCCGGAGAAGAGAACTTCTTGTTGAGCTCTAACAGAGTTCTCAGACAGTAA

Protein sequence

MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGEENFLLSSNRVLRQ

Homology

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BLAST of Carg27416 vs. NCBI nr
Match: XP_022961477.1 (ABC transporter I family member 20 [Cucurbita moschata] >XP_023516750.1 ABC transporter I family member 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 2.2e-130
Identity = 252/330 (76.36%), Postives = 253/330 (76.67%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSTPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

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BLAST of Carg27416 vs. NCBI nr
Match: XP_022968754.1 (ABC transporter I family member 20 [Cucurbita maxima])

HSP 1 Score: 468.0 bits (1203), Expect = 2.0e-128
Identity = 249/330 (75.45%), Postives = 251/330 (76.06%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           MPTTMPGS+PTIVID LRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT
Sbjct: 1   MPTTMPGSNPTIVIDGLRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGVGGVDPQRRAELINIL IDLSWTMHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVGGVDPQRRAELINILVIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATVIYATHIFDGLEDWPSHMVYVSHGKLQISMPMD 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV
Sbjct: 241 KIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 300

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BLAST of Carg27416 vs. NCBI nr
Match: XP_008463597.1 (PREDICTED: ABC transporter I family member 20 isoform X2 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 3.2e-118
Identity = 230/326 (70.55%), Postives = 241/326 (73.93%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPPP SKPLI++FSLTLN+GDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPCSKPLIENFSLTLNSGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPAR+AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG 300

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BLAST of Carg27416 vs. NCBI nr
Match: XP_004139526.1 (PREDICTED: ABC transporter I family member 20 [Cucumis sativus] >KGN65023.1 hypothetical protein Csa_1G181360 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 4.2e-118
Identity = 230/326 (70.55%), Postives = 240/326 (73.62%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPP GSKPLI++FSLTLNAGDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPA +AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPAHSAVRVINNG 300

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BLAST of Carg27416 vs. NCBI nr
Match: XP_022159044.1 (ABC transporter I family member 20 isoform X1 [Momordica charantia])

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-117
Identity = 228/330 (69.09%), Postives = 239/330 (72.42%), Query Frame = 0


Query: 1   MPTTMPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKT 60
           M    PGS PTIVID LRFTYPGIDGHPPPGSKPLIDDFSLTLNAG RCLLVGSNGAGKT
Sbjct: 1   MAVMKPGSDPTIVIDGLRFTYPGIDGHPPPGSKPLIDDFSLTLNAGHRCLLVGSNGAGKT 60

Query: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAV 120
           TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEW+RDVAFAGFEV IQMAV
Sbjct: 61  TILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWKRDVAFAGFEVSIQMAV 120

Query: 121 SAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------ 180
           SAEKLIFGV G+DP+RR ELIN+LDIDLSW MHKVSDGQRRRVQICMGLLKAYK      
Sbjct: 121 SAEKLIFGVDGIDPKRRDELINMLDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHIVYVSHGKLQISMPME 240

Query: 241 -----------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRV 254
                      RTVESWLRKERDEER++RRERKA+GLPEFE++IEESRVTGDPA  AVRV
Sbjct: 241 KIKEISKLSLMRTVESWLRKERDEERQRRRERKANGLPEFEQQIEESRVTGDPASCAVRV 300

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BLAST of Carg27416 vs. TAIR10
Match: AT5G02270.2 (non-intrinsic ABC protein 9)

HSP 1 Score: 375.6 bits (963), Expect = 2.5e-104
Identity = 206/346 (59.54%), Postives = 225/346 (65.03%), Query Frame = 0


Query: 11  TIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 70
           T+ I  LRFTYPGIDGHPPPGSKPLI+DFS+TLN+ DRCLLVGSNGAGKTTILKILGGKH
Sbjct: 13  TVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKH 72

Query: 71  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 130
           MVEPHMVRVLGRSAFHDT LT SGDLCYLGGEWRRDVAFAGFEVPIQM +SAEK+IFGV 
Sbjct: 73  MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132

Query: 131 GVDPQRRAELI--------------------------NILDIDLSWTMHKVSDGQRRRVQ 190
           G+DPQRR ELI                          ++LDID+SW +HKVSDGQRRRVQ
Sbjct: 133 GIDPQRRDELIKLEHGLIFDLCHIPNLRALHCLEYYYSVLDIDISWRLHKVSDGQRRRVQ 192

Query: 191 ICMGLLKAYK-------------------------------------------------- 250
           ICMGLLK +K                                                  
Sbjct: 193 ICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTH 252

Query: 251 ---------------------------RTVESWLRKERDEERKKRRERKASGLPEFEERI 253
                                      RTVESWLRKERDEERK+R+ERKA+GLPEFE R 
Sbjct: 253 IVYVANGKLQLALPMEKVKETSKKSLMRTVESWLRKERDEERKRRKERKANGLPEFETRT 312

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BLAST of Carg27416 vs. TAIR10
Match: AT1G03905.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 34  PLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMV-EPHMVRVLGRSAFHDTALTV 93
           P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHMV   ++V+VL RSAFHDT L  
Sbjct: 28  PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVC 87

Query: 94  SGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTM 153
           SGDL YLGG W + V  AG EVP+Q   SAE +IFGV G DP RR +LI++LDI+L W M
Sbjct: 88  SGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRM 147

Query: 154 HKVSDGQRRRVQICMGLLKAYK 175
           HKVSDGQ+RRVQICMGLL  +K
Sbjct: 148 HKVSDGQKRRVQICMGLLHPFK 168

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BLAST of Carg27416 vs. TAIR10
Match: AT5G44110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-47
Identity = 95/164 (57.93%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           I +  ++F+Y   D        P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHM
Sbjct: 13  IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHM 72

Query: 72  V-EPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 131
           V   ++V+VL RSAFHDT L  SGDL YLGG W +    AG ++P+Q   SAE +IFGV 
Sbjct: 73  VGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVE 132

Query: 132 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
           G+DP RR +LI++LDI+L W MHKVSDGQRRRVQICMGLL  +K
Sbjct: 133 GIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFK 167

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BLAST of Carg27416 vs. TAIR10
Match: AT4G25450.1 (non-intrinsic ABC protein 8)

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-08
Identity = 55/178 (30.90%), Postives = 81/178 (45.51%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           + +D + F YP       P  K ++D  SLTLN+G    LVGS+GAGK+TI+++L     
Sbjct: 470 VCLDDVHFAYP-----LRPDVK-VLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLA--RF 529

Query: 72  VEPHMVRVLGRSAFHDTALTVSGD--LCYLGGEWRRDVAFAGFEVPIQMAVS-AEKLIFG 131
            EP   R+           TV G+    +   EW + V+    E P+  ++S AE + +G
Sbjct: 530 YEPTQGRI-----------TVGGEDVRMFDKSEWAKVVSIVNQE-PVLFSLSVAENIAYG 589

Query: 132 -----VGGVDPQRRAELINILDIDLSWTM----------HKVSDGQRRRVQICMGLLK 172
                V   D  + A+  N  D  +S               +S GQR+RV I   LLK
Sbjct: 590 LPNEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARSLLK 627

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BLAST of Carg27416 vs. TAIR10
Match: AT3G47740.1 (ABC2 homolog 2)

HSP 1 Score: 48.9 bits (115), Expect = 5.3e-06
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 8   SSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILG 67
           +S  IV D LR  YPG DG+PP   K  +   SL + +G+   ++G NGAGKT+ + ++ 
Sbjct: 606 TSHAIVCDKLRKVYPGRDGNPP---KKAVRVLSLAVPSGECFGMLGPNGAGKTSFINMMT 665

Query: 68  GKHMVEP 75
           G  +V+P
Sbjct: 666 G--LVKP 667

[Close]

BLAST of Carg27416 vs. Swiss-Prot
Match: sp|Q9LZ98|AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCI20 PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.0e-107
Identity = 206/320 (64.38%), Postives = 224/320 (70.00%), Query Frame = 0


Query: 11  TIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKH 70
           T+ I  LRFTYPGIDGHPPPGSKPLI+DFS+TLN+ DRCLLVGSNGAGKTTILKILGGKH
Sbjct: 13  TVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKH 72

Query: 71  MVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 130
           MVEPHMVRVLGRSAFHDT LT SGDLCYLGGEWRRDVAFAGFEVPIQM +SAEK+IFGV 
Sbjct: 73  MVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVA 132

Query: 131 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------------- 190
           G+DPQRR ELI +LDID+SW +HKVSDGQRRRVQICMGLLK +K                
Sbjct: 133 GIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 192

Query: 191 ------------------------------------------------------------ 250
                                                                       
Sbjct: 193 ADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSL 252

Query: 251 -RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRL 253
            RTVESWLRKERDEERK+R+ERKA+GLPEFE R EESRVTGDPA    R++NNGWAAGRL
Sbjct: 253 MRTVESWLRKERDEERKRRKERKANGLPEFETRTEESRVTGDPA----RMLNNGWAAGRL 312

[Close]

BLAST of Carg27416 vs. Swiss-Prot
Match: sp|Q3EDJ0|AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCI19 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-46
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 34  PLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMV-EPHMVRVLGRSAFHDTALTV 93
           P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHMV   ++V+VL RSAFHDT L  
Sbjct: 28  PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVC 87

Query: 94  SGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTM 153
           SGDL YLGG W + V  AG EVP+Q   SAE +IFGV G DP RR +LI++LDI+L W M
Sbjct: 88  SGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRM 147

Query: 154 HKVSDGQRRRVQICMGLLKAYK 175
           HKVSDGQ+RRVQICMGLL  +K
Sbjct: 148 HKVSDGQKRRVQICMGLLHPFK 168

[Close]

BLAST of Carg27416 vs. Swiss-Prot
Match: sp|Q9XF19|AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCI21 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-46
Identity = 95/164 (57.93%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 12  IVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHM 71
           I +  ++F+Y   D        P+  DF+L L AG RCLLVG+NG+GKTT+LKIL GKHM
Sbjct: 13  IRVSGMQFSYDVQD--------PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHM 72

Query: 72  V-EPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVG 131
           V   ++V+VL RSAFHDT L  SGDL YLGG W +    AG ++P+Q   SAE +IFGV 
Sbjct: 73  VGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVE 132

Query: 132 GVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
           G+DP RR +LI++LDI+L W MHKVSDGQRRRVQICMGLL  +K
Sbjct: 133 GIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFK 167

[Close]

BLAST of Carg27416 vs. Swiss-Prot
Match: sp|Q7Z991|YE31_SCHPO (ABC transporter domain-containing protein C20G4.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC20G4.01 PE=4 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 36  IDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGD 95
           +D  +L L  G R LLVG+NGAGK+T+LK+L GK + +   + V G+  F ++    S  
Sbjct: 20  LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRES----SSA 79

Query: 96  LCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVD-PQRRAELINILDIDLSWTMHK 155
             YLG EW  +         I   +S  +LI  VGG    +RR  LI+ILDIDL W MH 
Sbjct: 80  FVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHA 139

Query: 156 VSDGQRRRVQICMGLLKAYK 175
           VSDG+RRRVQ+CMGLL+ ++
Sbjct: 140 VSDGERRRVQLCMGLLRPFE 148

[Close]

BLAST of Carg27416 vs. Swiss-Prot
Match: sp|P43569|CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CAF16 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-18
Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 32  SKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALT 91
           S P + D +L +    R L+VG+NGAGK+T+LK+L GKH+     + V G   F   ++ 
Sbjct: 20  SDPSVVDINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMN 79

Query: 92  VSGD------------LCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAE 151
              D              YLG EW            I   +   +L+  +G    + R E
Sbjct: 80  QVDDDESVEDSTNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSIGFDHFRERGE 139

Query: 152 -LINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK 175
            L+ ILDID+ W MH++SDGQ+RRVQ+ MGLLK ++
Sbjct: 140 RLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWR 168

[Close]

BLAST of Carg27416 vs. TrEMBL
Match: tr|A0A1S3CJM7|A0A1S3CJM7_CUCME (ABC transporter I family member 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501708 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 2.1e-118
Identity = 230/326 (70.55%), Postives = 241/326 (73.93%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPPP SKPLI++FSLTLN+GDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPCSKPLIENFSLTLNSGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPAR+AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPARSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. TrEMBL
Match: tr|A0A0A0LTD5|A0A0A0LTD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181360 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.8e-118
Identity = 230/326 (70.55%), Postives = 240/326 (73.62%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILK 64
           MP S PTIVID LRFTYPGIDGHPP GSKPLI++FSLTLNAGDRCLLVGSNGAGKTTILK
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKTTILK 60

Query: 65  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEK 124
           ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQMAVSAEK
Sbjct: 61  ILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQMAVSAEK 120

Query: 125 LIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---------- 184
           LIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK          
Sbjct: 121 LIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVD 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 LDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKE 240

Query: 245 -------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNG 254
                  RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPA +AVRV+NNG
Sbjct: 241 ISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPAHSAVRVINNG 300

[Close]

BLAST of Carg27416 vs. TrEMBL
Match: tr|A0A1S3CL69|A0A1S3CL69_CUCME (ABC transporter I family member 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501708 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.0e-116
Identity = 230/332 (69.28%), Postives = 241/332 (72.59%), Query Frame = 0


Query: 5   MPGSSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGA------G 64
           MP S PTIVID LRFTYPGIDGHPPP SKPLI++FSLTLN+GDRCLLVGSNGA      G
Sbjct: 1   MPSSDPTIVIDRLRFTYPGIDGHPPPCSKPLIENFSLTLNSGDRCLLVGSNGAVFVSVSG 60

Query: 65  KTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQM 124
           KTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRD+AFAGF+VPIQM
Sbjct: 61  KTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQM 120

Query: 125 AVSAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK---- 184
           AVSAEKLIFGVGGVDP+RR ELINILDIDLSW MHKVSDGQRRRVQICMGLLKAYK    
Sbjct: 121 AVSAEKLIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLL 180

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 181 DEITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMP 240

Query: 245 -------------RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAV 254
                        RTVESWLRKERDEER +RRERKA+GLPEFEERIEESRVTGDPAR+AV
Sbjct: 241 MDKIKEISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPARSAV 300

[Close]

BLAST of Carg27416 vs. TrEMBL
Match: tr|A0A097P9U5|A0A097P9U5_HEVBR (ABC transporter family protein OS=Hevea brasiliensis OX=3981 GN=ABCI20 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 3.3e-111
Identity = 216/321 (67.29%), Postives = 229/321 (71.34%), Query Frame = 0


Query: 10  PTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGK 69
           PTI I+ L+FTYPGIDGHPPPGSKPLIDDFSLTL  GDRCLLVGSNGAGKTTILKILGGK
Sbjct: 9   PTIEINDLKFTYPGIDGHPPPGSKPLIDDFSLTLKTGDRCLLVGSNGAGKTTILKILGGK 68

Query: 70  HMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGV 129
           HMVEP MVRVLGRSAFHDTALT SGDLCYLGGEWRRDVAFAGFEVPIQM VSAEK+IFGV
Sbjct: 69  HMVEPQMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGV 128

Query: 130 GGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK--------------- 189
            G+DPQRRAELI +LDIDLSW MHKVSDGQRRRVQICMGLL+ +K               
Sbjct: 129 AGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEITVDLDVLA 188

Query: 190 ------------------------------------------------------------ 249
                                                                       
Sbjct: 189 RADLLKFLRKECEERGATIIYATHIFDGLEEWPTHIVYVAHGKLQLAMPMAKVKEISNLS 248

Query: 250 --RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGR 254
             RTVESWLRKERDEERK+R+ERKASGLPEFE+++E SRVTGDPA AAVR MNNGWAAGR
Sbjct: 249 LMRTVESWLRKERDEERKRRKERKASGLPEFEKQMEGSRVTGDPASAAVRAMNNGWAAGR 308

[Close]

BLAST of Carg27416 vs. TrEMBL
Match: tr|A0A061ER40|A0A061ER40_THECC (Non-intrinsic ABC protein 9 OS=Theobroma cacao OX=3641 GN=TCM_021928 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.3e-111
Identity = 214/323 (66.25%), Postives = 229/323 (70.90%), Query Frame = 0


Query: 8   SSPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILG 67
           S PT+ I+ LRFTYPGIDGHPPPGS PLIDDFSLTLNAG+RCLLVGSNGAGKTTILKI+G
Sbjct: 6   SKPTVEINGLRFTYPGIDGHPPPGSAPLIDDFSLTLNAGNRCLLVGSNGAGKTTILKIMG 65

Query: 68  GKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIF 127
           GKHMVEPHMVRVLGRSAFHDT L  SG+LCYLGGEWRRDVAFAGFEVPIQM +SAEK+IF
Sbjct: 66  GKHMVEPHMVRVLGRSAFHDTVLASSGELCYLGGEWRRDVAFAGFEVPIQMDISAEKMIF 125

Query: 128 GVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYK------------- 187
           GV G+DP+RRAELI +LDIDLSW MHKVSDGQRRRVQICMGLLK +K             
Sbjct: 126 GVAGIDPKRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDV 185

Query: 188 ------------------------------------------------------------ 247
                                                                       
Sbjct: 186 LARADLLHFLRKECEERGATIIYATHIFDGLEKWPSHIVYVAHGKLQLAMPMDEVKEISN 245

Query: 248 ----RTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAA 254
               RTVESWLRKERDEER+KR+ERKA GLPEFE +IE SRVTGDPARAAVR +NNGWAA
Sbjct: 246 LSLMRTVESWLRKERDEERQKRKERKAHGLPEFENQIEGSRVTGDPARAAVRALNNGWAA 305

The following BLAST results are available for this feature:

BLAST of Carg27416 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961477.1	2.2e-130	76.36	ABC transporter I family member 20 [Cucurbita moschata] >XP_023516750.1 ABC tran...	[more]
XP_022968754.1	2.0e-128	75.45	ABC transporter I family member 20 [Cucurbita maxima]	[more]
XP_008463597.1	3.2e-118	70.55	PREDICTED: ABC transporter I family member 20 isoform X2 [Cucumis melo]	[more]
XP_004139526.1	4.2e-118	70.55	PREDICTED: ABC transporter I family member 20 [Cucumis sativus] >KGN65023.1 hypo...	[more]
XP_022159044.1	1.6e-117	69.09	ABC transporter I family member 20 isoform X1 [Momordica charantia]	[more]

BLAST of Carg27416 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G02270.2	2.5e-104	59.54	non-intrinsic ABC protein 9	[more]
AT1G03905.1	1.6e-47	65.49	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G44110.1	2.1e-47	57.93	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G25450.1	5.7e-08	30.90	non-intrinsic ABC protein 8	[more]
AT3G47740.1	5.3e-06	40.30	ABC2 homolog 2	[more]

BLAST of Carg27416 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZ98\|AB20I_ARATH	3.0e-107	64.38	ABC transporter I family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCI20 PE=...	[more]
sp\|Q3EDJ0\|AB19I_ARATH	3.0e-46	65.49	ABC transporter I family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCI19 PE=...	[more]
sp\|Q9XF19\|AB21I_ARATH	3.9e-46	57.93	ABC transporter I family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCI21 PE=...	[more]
sp\|Q7Z991\|YE31_SCHPO	4.1e-24	45.00	ABC transporter domain-containing protein C20G4.01 OS=Schizosaccharomyces pombe ...	[more]
sp\|P43569\|CAF16_YEAST	2.0e-18	35.90	CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of Carg27416 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJM7\|A0A1S3CJM7_CUCME	2.1e-118	70.55	ABC transporter I family member 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A0A0LTD5\|A0A0A0LTD5_CUCSA	2.8e-118	70.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181360 PE=4 SV=1	[more]
tr\|A0A1S3CL69\|A0A1S3CL69_CUCME	2.0e-116	69.28	ABC transporter I family member 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A097P9U5\|A0A097P9U5_HEVBR	3.3e-111	67.29	ABC transporter family protein OS=Hevea brasiliensis OX=3981 GN=ABCI20 PE=2 SV=1	[more]
tr\|A0A061ER40\|A0A061ER40_THECC	4.3e-111	66.25	Non-intrinsic ABC protein 9 OS=Theobroma cacao OX=3641 GN=TCM_021928 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016887	ATPase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003439	ABC_transporter-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27416-RA	Carg27416-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..197 e-value: 1.3E-17 score: 65.9
None	No IPR available	PANTHER	PTHR12847	ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED	coord: 11..174
None	No IPR available	PANTHER	PTHR12847:SF6	ABC TRANSPORTER I FAMILY MEMBER 19-RELATED	coord: 11..174
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 37..172 e-value: 5.4E-11 score: 43.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27416	Cla010954	Watermelon (97103) v1	carwmB0740
Carg27416	ClCG01G010800	Watermelon (Charleston Gray)	carwcgB0720
Carg27416	CmaCh10G011720	Cucurbita maxima (Rimu)	carcmaB1039
Carg27416	CmoCh10G012510	Cucurbita moschata (Rifu)	carcmoB1011
Carg27416	Lsi02G011400	Bottle gourd (USVL1VR-Ls)	carlsiB680
Carg27416	Cp4.1LG18g00160	Cucurbita pepo (Zucchini)	carcpeB1046
Carg27416	Cla97C01G010570	Watermelon (97103) v2	carwmbB0778

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None