ClCG01G010430 (gene) Watermelon (Charleston Gray)

NameClCG01G010430
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 15821372 .. 15821668 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTCTTCCGTTGCGTTAGGGATTTCAGCCCTTTCATATATGACATCTATGATTGTCAGTTAAGTATATTACATGTTGATGCAGCTTGCAAGATGGGATTCCCACTGGTGGGCTCTAGAGGGGTGATTGGGTCCTCTTCAGGATCTATGATCGCTTCTATGCATGGTTTTCGGAAGTTATCTTTGACCCTAGCAGATGTTGAAGCGTTGGCTATTTATGAGGGTCTACGATTGGCTGTTAGATTGGAGTTATCTCATTTGTTGGTGTTATCTGATTCTTTAGTGATTATTTAG

mRNA sequence

ATGTATTTCTTCCGTTGCGTTAGGGATTTCAGCCCTTTCATATATGACATCTATGATTGTCAGTTAAGTATATTACATGTTGATGCAGCTTGCAAGATGGGATTCCCACTGGTGGGCTCTAGAGGGGTGATTGGGTCCTCTTCAGGATCTATGATCGCTTCTATGCATGGTTTTCGGAAGTTATCTTTGACCCTAGCAGATGTTGAAGCGTTGGCTATTTATGAGGGTCTACGATTGGCTGTTAGATTGGAGTTATCTCATTTGTTGGTGTTATCTGATTCTTTAGTGATTATTTAG

Coding sequence (CDS)

ATGTATTTCTTCCGTTGCGTTAGGGATTTCAGCCCTTTCATATATGACATCTATGATTGTCAGTTAAGTATATTACATGTTGATGCAGCTTGCAAGATGGGATTCCCACTGGTGGGCTCTAGAGGGGTGATTGGGTCCTCTTCAGGATCTATGATCGCTTCTATGCATGGTTTTCGGAAGTTATCTTTGACCCTAGCAGATGTTGAAGCGTTGGCTATTTATGAGGGTCTACGATTGGCTGTTAGATTGGAGTTATCTCATTTGTTGGTGTTATCTGATTCTTTAGTGATTATTTAG

Protein sequence

MYFFRCVRDFSPFIYDIYDCQLSILHVDAACKMGFPLVGSRGVIGSSSGSMIASMHGFRKLSLTLADVEALAIYEGLRLAVRLELSHLLVLSDSLVII
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G010430.1ClCG01G010430.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 24..97
score: 2.0
NoneNo IPR availablePFAMPF13456RVT_3coord: 27..98
score: 1.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None