ClCG01G008790 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGGACAAGCGGACGCTACACGGATAGAACATTTTGGCCCTCGAGGTTTTCCTCGAAGAATGAGTCGTTCAAGTTTCTGTCTCTTCTTCTCCATTACTCATCTCTTTCGTCTATGAATATTCCTTCTTCCTAATAGACTTCCACAATTTCCATTTCTTCAGCTCCTTTGGTTGATCACTAATCAAGACTTCTTCACAGTTCCCTTCATTTTCGGAAATGGGTTTTTTCGATTCCATCCTCAATTGGCTCAGGAGGTATGATTTTGTCTTTCCCCCAAATTTTCCTGTTCTTGAATTGTGGGATTTTATTTTATTTATTGATCCTATTTTTTTGGCGGCTGAGCAAAAATTAGGAATAATTTTTACTTAGTTATTTGGGATTTAGTGTTACTAGTTTGTTGAAAGAAGGAATTGTCGGCTGAGTAGGGAAAGCTGCGTTTTAATTTTAAATTCGAACATGGGCCTCTTGTTTGACATTAATCTATAGTGAAGGTTCATTGGGAATGCAATATTTTGTGTATTCGTTTGGTCAGTGAAGGTTCATTGGGAATGCAATATTTTGTGTATTCGTTTGGTCTTCTATTGAGTTTATTATGTTAATTTGAAGTTTGAATATTCAATCCTTCGAGTTGAGTGGTGCAGCTGTAAAAGATTTATAGATTTGTTAGTTAAAATTGCCCAACTGGGTCCCTTACGAATCTTATACTCATCACCATATTTTTGTGATGTCACTGAGATGGTTTACTCTGAAGTTCAGATTGCATTTGGGTTTGAGTTTTTGATGTAGTTCCAGTAAGTTAGCTTTTTTTATTATTTTTTAAGAAAAGACCTCAAAAGAAAGAAGAAAGTAGAATTGACTATCTAGTCATTCAAAATTTATTTTTATTTTTGCAAAAAAAAAAAAAAAAAAGAATAGAAGGATGTCAAACCCACAAAAATCCCACTAAAGATAGGGCTCCAACCACATAAAATCATGTCTATAGAGTAATTACAAAAAGTCTTCAAAATTGAAGCCCAAAGATAAACATGAAACTTCACCAAGGACCAAACATCACTAGAGTTTCTCTCCCCGAAGAACCCATAATAGAGCACACATCCCAACAAACAAATGACCCTTCTTGCTATAAGGCAGGTGGAGCAGGAGCTCTCAAATCAAGTCTCTAACGATAACCTGATGTAGTCCCTGTACATCATTATATGGGTTCACAGGCCAACCACTCACAACATGAAGAGTAACTGATATTATTACTAACACATCAGAACAAATAGTAACAGAACAAGTAATGGACTCTTTTAACATTTCTGTGGAGGTTGGGCAGGGTTGGATTTAGGCCCAGAAAATACTGGCTATACCTTGCTTCCTTGAAGCTGGCCACGATATTGGGAGTTTCTCTCCGTACCGCTTGAAATCATTCTTAGATATTCCCTAAAGTTATAATGTTAGAGACACAATCGAGTGTGTTGTTCTAGGCAGCTGTTCTCTAGCTAGGATCTTATTTTGTTTGCGGTGTTGCAGAACATCAACAATGGAATGCAATTGGAACAATTATTTTGGTTGTTTTCTGCCTTGGATCCCAACTTCTACATATTTGTGGCTTTTATACCTTAATTTTTTCAATGTGCATATTTTGTTTTCTTTTCCATACTTCTCACATTGCCCTAGCCACTGTTCTTGCATTTTAGTTTTGTAATGGAATCCCAAGTTGTAGGGAAGTCATTGTGTTAATCTAGCTTCCATGACCATGGCTTTATGGTTTTAACTTCTTCGTGAAAAAACAAAAGTGTTGTCGTCTCCAGTTTGATCTTTGGTTTGTTAGCCCTGTAGAATCACAAAACGCCTGTTGCTACGTTCTTGAATTAACCCTTTAGTTCATTAATAAACAAAAATTTCTGAGAAATGGAGAAACCATTGATGCGTGGTGTTTCAGTTTTTTTCATATGCCTAACCTTATTCAAGATCTGAAGGAAGCTGTTTCTTGCTACTACTTGAGATTTTTGGAAGTTCTTTTCAATTGAACTTTTTTGTGTGCTTGTTTTTCAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTGTAAGAAAATGCAAATTTTCACATCTCTTTGTTTGTGTATGGGAATGGCCTTCTTGTTCCCTGATGGTTTTCAAATTTTACAGACAGGGGGCTACAGTGAGGATATGATTCCAACTGTGAGTATGTTTTTTCTATCAAGTTCGCTGTTTACACTCATTCAACTGAATTTATCTTATGATCTTCACTTCATATTCTGATAACCAGGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTAAATGTCCCAATTCTCTTACCCTTTCTCCTCATTCCATTTTAGCTATGTTTGTTACTTTAGCTTACTATATGGCTGATTATTTATTTATCTTTATTTAAACACCTGAACTCGTCAAAATTTAAACACAAAGCAAACAAATCACTGCATTTAGATATAATATCCTTTTATCCTAGTAGCATTATCTGCACTTCAAAAATGTTACCATCTGATAATTTGCATTCAAGAAAATCATTTTCTTTTCCAGTTTTGAGAGATTCCAAGATTCCCTGCCCTTTCCTGTATTTATTGAATTGATATCTTTCTCTTGAAGTCCAGTATCTCCCTCGTTAGAAGGATGAATTGTTCACATTCCATTTGATGGTTAGGAGAACACTTGAGCAAACAAAACCCAACAAATCTACATTTTTTGCTCGTCATAAAGTTCTCTGCAATTACACAGGCTGCAGGGGGCTGCTATTGGCTCTTGTTTTGAACCTTTTAAACATTAACTCAAAAATATGGAAATAATAAAAACTCTTCGAACTCTTTTGAGGGGCCTGGATTCACCCCCTTAAGATTCTCTCTAGTATGCTATCAGTATCTAACATCACTAGTTGGGAGCTTTGCAATGATAATGATAACATTCTAGAACCATTTGAATTGTAATTATTTGACATCCCTATTGTTAACATTGTTAACTAATTGGTGGGTGACTTGAAATACCTATTTGTTAAGTATTAACTGATCTGACTCCGACAAATGGCTAGAGTTGATAACTTGATAAAATAGGGTGCCATGGTCTATAAAAGGGATTTCGCTTCAGAAAGATGGATATAGTGTACGTGGGATTTTATTTATCTTGATATCTACCTCCTTAAGTTATTTGTCAGCCTTCTGGTATTAGATCAATTAACACCTCTCTCATAAGGATATCACATCATCATTAAAGTCCATCGTGTTGACGACAAAACAATATAGAATCACGATCAAAATTCAGTTACATTTCAAAATTTTTAAAGTCTAAAGACCAAATAGACAACCATCAAAGTTGAATAACCAAATCTGGATATTAACACTTCCATTTTGGTTTCTTTGTTATTTCTTTACCCTTTGTCCTGATATAATATGATGGGTGCAAGGTCAGGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTGTGAGTCCTGGATATTATATGGATGATATGGTTACAGTGTTCTGTCCATTCATATTGAAATGTACTTTTGATGATAATCTTTTTGGTTTGTTGCTGCAGAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGATTGGTTTTATACCTTGTTTCTGTCTACCTAAAGAGTGATGAAGGTTCAAAGCAAGCTGTAGTGTGTAGAGGGTTTGAAGTTTATAAAGTTCAGCTATTCATGTTTGTTTGTTTTCAAATATATTGTAATTCAGCCATGCTGTCTATACTTCTTCCTTCATAAAGAAAAAAAAAAGTAAAAGAATTTATGCTGTAATTTTTTGCCATTATGGTTTTTGTCTCTAAACTATAATTGATATCCAATCATGTCAAAATCATCGAACGTATTAGTCATGGTGTGAAATACCATCGAACATCAGTTGCGTTATGAAAT CTTTGGACAAGCGGACGCTACACGGATAGAACATTTTGGCCCTCGAGGTTTTCCTCGAAGAATGAGTCGTTCAAGTTTCTGTCTCTTCTTCTCCATTACTCATCTCTTTCGTCTATGAATATTCCTTCTTCCTAATAGACTTCCACAATTTCCATTTCTTCAGCTCCTTTGGTTGATCACTAATCAAGACTTCTTCACAGTTCCCTTCATTTTCGGAAATGGGTTTTTTCGATTCCATCCTCAATTGGCTCAGGAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGATTGGTTTTATACCTTGTTTCTGTCTACCTAAAGAGTGATGAAGGTTCAAAGCAAGCTGTAGTGTGTAGAGGGTTTGAAGTTTATAAAGTTCAGCTATTCATGTTTGTTTGTTTTCAAATATATTGTAATTCAGCCATGCTGTCTATACTTCTTCCTTCATAAAGAAAAAAAAAAGTAAAAGAATTTATGCTGTAATTTTTTGCCATTATGGTTTTTGTCTCTAAACTATAATTGATATCCAATCATGTCAAAATCATCGAACGTATTAGTCATGGTGTGAAATACCATCGAACATCAGTTGCGTTATGAAAT ATGGGTTTTTTCGATTCCATCCTCAATTGGCTCAGGAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGA MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIVYVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSKQALVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG
BLAST of ClCG01G008790 vs. Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.3e-67 Identity = 115/182 (63.19%), Postives = 149/182 (81.87%), Query Frame = 1
BLAST of ClCG01G008790 vs. Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66 Identity = 114/182 (62.64%), Postives = 150/182 (82.42%), Query Frame = 1
BLAST of ClCG01G008790 vs. Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66 Identity = 115/182 (63.19%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of ClCG01G008790 vs. Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66 Identity = 115/182 (63.19%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of ClCG01G008790 vs. Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66 Identity = 115/182 (63.19%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of ClCG01G008790 vs. TrEMBL
Match: A0A0A0KN64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G424890 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 9.7e-99 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of ClCG01G008790 vs. TrEMBL
Match: A0A151RI26_CAJCA (ADP-ribosylation factor-like protein 8B-A OS=Cajanus cajan GN=KK1_036391 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.2e-92 Identity = 169/183 (92.35%), Postives = 179/183 (97.81%), Query Frame = 1
BLAST of ClCG01G008790 vs. TrEMBL
Match: G7K1N4_MEDTR (ADP-ribosylation factor-like protein A1D OS=Medicago truncatula GN=MTR_5g078090 PE=2 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 8.8e-92 Identity = 169/183 (92.35%), Postives = 180/183 (98.36%), Query Frame = 1
BLAST of ClCG01G008790 vs. TrEMBL
Match: I1MBV8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G214600 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.2e-91 Identity = 168/183 (91.80%), Postives = 179/183 (97.81%), Query Frame = 1
BLAST of ClCG01G008790 vs. TrEMBL
Match: A0A067JPJ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22509 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.2e-91 Identity = 169/183 (92.35%), Postives = 178/183 (97.27%), Query Frame = 1
BLAST of ClCG01G008790 vs. TAIR10
Match: AT5G37680.1 (AT5G37680.1 ADP-ribosylation factor-like A1A) HSP 1 Score: 337.8 bits (865), Expect = 4.2e-93 Identity = 163/183 (89.07%), Postives = 176/183 (96.17%), Query Frame = 1
BLAST of ClCG01G008790 vs. TAIR10
Match: AT5G67560.1 (AT5G67560.1 ADP-ribosylation factor-like A1D) HSP 1 Score: 300.1 bits (767), Expect = 9.6e-82 Identity = 143/183 (78.14%), Postives = 166/183 (90.71%), Query Frame = 1
BLAST of ClCG01G008790 vs. TAIR10
Match: AT3G49870.1 (AT3G49870.1 ADP-ribosylation factor-like A1C) HSP 1 Score: 298.1 bits (762), Expect = 3.7e-81 Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of ClCG01G008790 vs. TAIR10
Match: AT3G49860.1 (AT3G49860.1 ADP-ribosylation factor-like A1B) HSP 1 Score: 235.0 bits (598), Expect = 3.8e-62 Identity = 114/165 (69.09%), Postives = 134/165 (81.21%), Query Frame = 1
BLAST of ClCG01G008790 vs. TAIR10
Match: AT2G24765.1 (AT2G24765.1 ADP-ribosylation factor 3) HSP 1 Score: 111.7 bits (278), Expect = 4.9e-25 Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 1
BLAST of ClCG01G008790 vs. NCBI nr
Match: gi|449445077|ref|XP_004140300.1| (PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of ClCG01G008790 vs. NCBI nr
Match: gi|659121177|ref|XP_008460532.1| (PREDICTED: ADP-ribosylation factor-like protein 8A isoform X1 [Cucumis melo]) HSP 1 Score: 367.1 bits (941), Expect = 1.8e-98 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of ClCG01G008790 vs. NCBI nr
Match: gi|1012204864|ref|XP_015931620.1| (PREDICTED: ADP-ribosylation factor-like protein 8B [Arachis duranensis]) HSP 1 Score: 350.5 bits (898), Expect = 1.8e-93 Identity = 172/183 (93.99%), Postives = 180/183 (98.36%), Query Frame = 1
BLAST of ClCG01G008790 vs. NCBI nr
Match: gi|502096772|ref|XP_004490821.1| (PREDICTED: ADP-ribosylation factor-like protein 8B [Cicer arietinum]) HSP 1 Score: 345.5 bits (885), Expect = 5.7e-92 Identity = 170/183 (92.90%), Postives = 180/183 (98.36%), Query Frame = 1
BLAST of ClCG01G008790 vs. NCBI nr
Match: gi|1012330698|gb|KYP42207.1| (ADP-ribosylation factor-like protein 8B-A [Cajanus cajan]) HSP 1 Score: 345.1 bits (884), Expect = 7.4e-92 Identity = 169/183 (92.35%), Postives = 179/183 (97.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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