ClCG01G005350 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G005350
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	MADS-box transcription factor 2
Location	CG_Chr01 : 5706589 .. 5716141 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATGGTTCAGCATGCAAAAGACAATTGAACGGTACCGTAGCTATGGGAAAGATGGACAAACCAACCCTTTTCGATCAGAAGGATATATGCAGGTTTTTTCTTCAACTTTTCTCTCTTACGTACTTATATACTTATATTACGAGTTTACTTCGTTTTTGTGTCTATTTTATTTATGAATTTTAAATTATTTTTAATAGTTAATACTTCAGATTTCAAATTTCAATTGTGTATTTAGTAAGTCTCTAAACTTTAAAAAATATGTTCGATAGGTACTTAAACTTCCAAAGATTTTATTCTATTTTAGTTCCTTTTACTAAAGGTTTGAATTTAGCCGCACTATATTTTCAATAAATCTTAAGACTATTTATTTTGACGAAAAAAATTAATCTTAAGATTTATTGAAATTACATAGACTAAATTGAAAGAATTGAAATTATAGAGGTCAAAAGAGTATTCTAACTATCGTTTTATTATGTTTCAATTTAAGAAGCTTAACTTCAAATATAAATTATGTGAATCTGGACAAGCATAATTTTATGGATAGAGTTATTAATTATCATCTCAAATGACAATTGAACAAAAAGAAAAGGAAGAGAATAAAAAAAATAAAAAAAAAATAAAATAAAAAGGTTATGTCACCTTAAAAACTCAAAAAGGAAAGAAAGATGATATAGTGAGTTGAAATTAAATGATTTGACTTGAGAGAATTGCGATAAGACTTTTGAATAGAAAATTTTTAGGGTTTTGTGTTATGGTTGCTAAAGCATCAAAATCTTTCTCTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGTAAATCTGTAGTCTTTGTGAGTTGTTTTTATTCTATATATTCTTTATTATTTTGCTAGTTATCTTGTTTTTGATAGTACATAAATTTCTTAATGCAAATATATTATAGTTTCTTTGTGGATTATGTTGCAATATGTTTAATGAAAAATGCGCAAGATAATTTCTGTCTACTTTTATATATTTTGATTATGCATGTGTTGGTAATTAATGTGAGGCATTGAAGGAAGAAAATCTTATATTAGGGTGCAAATTGAATAGATAAATATTTATGCATGCATGCATAAAATCTCAAATGGAGAAAAAATGGTGTTAATCCAAAAGATTATCTAACAACCAATTTGGAATTATATATTATTGATTTCTAACGTAGGATAAGATGTTAGAATAAATTAATCTACAGTTTAACTAGTTGTTATTAGTTTTAGTTGTTAATTTTGAGTTAATTAGTGTTTAATAATTAGTAGTTCATTGTTTAATATTAGTTAACATGGGTTTGGCGATGAGGAGAGTAACTCATCTATTTTATAAACATTGTGAGGTCCTTGATGGGCTAAAAGCTAAAGCGAATTGGATATGGTAAATTTAGTTATATCAATACTTTAACACATCTCCTCACTTGTAGATTTGAAATTTTTTGTAGAAACCCAACAAGTGAAAATCAATATTAATAGGGGAGGAAATGACATTAGAGGGGTTTGAATACCTAGCCTCCTTTTTTGATATCATGTTAAATTACTTGTGATGTCGTCTCTTGATTTCTTCAATGTGGGATCCTCAACAATTTATTTATTTCAAACTAAATTACAAAAAATATTCGTAAATTTTGTCGTTTGTTTAAAAAATACTTCTATTTCTCTCAAAAAGTTGCAATTTAATCATTCATAAATATTTCTAAACTATCATTGAAGTAAAAATCAAATAGAATATTTGAATGCATGAAAACTGAGATTTAGAATGGTTGTGGCGGTGACCAGAAAAAGGGTGGCATGCTTGAGTCATTTTTGTCCACCGTCATCAATACACAATTTCACGTCCGAATTTTCATCTAACATTTTAACACATTCTTACTCCAAAGATAGTTTTGAAACGTCTATGAAAGACCAAGGTAATATTGCAACTTTTGAAAGAATAAATACATTTTTTAAACAATAGCATTTATTTTAAGAATTTAGCGTTCTTTCAACTTTGAGATGAATTTCCCTTATTTGATCATGGATTCGGCCTAATCACGAATCAGCTGCATCAAATGTCTATGCAGCAACTGAAGCAAGAAGCTGACATGACAGCAAAGAAAATCGAGCAACTTGAAAAATCACAAGAGTATGCAATTTAAAGCTTACCAGATTCTTCAATTTAATATATAGTATCATAAATATGTATAAAATGTGTTATTAGGTTAATTAATATTATCGAGTATTATTTTGAATTTTGCATGGTCTTTAGGAAGCTTTTGGGACGTGGGTTGGATTCTTGTTCCTTTGAGGAACTTCGAGGGATTGAAAGACAGTTGGTACATAGCTTAACCCGTATTAGAGAAACCAAGGTACGTTTCAAAATTCCCATACTTTTACATTTTTACGTTACTTCCCTATGATATCTAAGAATTTTGCTTAATTTTCACATTAAAATTATTAATTTCTGAATTTCAAAGTTAGAATATGTGTTTAGGAAAATGCTTTTAACTATCACAAAATATATATATATAGAGTCAATGTTTATGTTTGCTAAACATGTAAGATCACGTAAGATCTCTTGATCGAGGTTTAATTTCACCATTCTTGATCGGATCTCAATTATATGAGTTCTATCTCAAAACCAATTGATAATGAGAGAAGTAGCCAATCTATCTTATAAAGAGTTTGAGGTCCCTTAAATCTTTTAATATGGGATCTACAACAATACTAATTATGAGTTTAAATTAATTTATTTATTAGTTGATTAAATTATAAATCTCGCACGAAGTCTATCGAGAATATATGTTGATACAATTTAACTAACTTCTCTCACTACACTCTTTTTGCTAGCTTTTAGAAATTAAGCTTAGTACATGAACTTATAATTTCATAAATTCTTGAAAGGAGTGTCTATTGGGTATCATATAAAGAGACCATTTCTCTTATTTCTAACTCAGCCAAATAAGCTTTCAATTCAAGCAAATTCGAAGCAAAGCAATTAAAAAAGAGTTCAAGAGAATAAATTTCTTCTCCAATGTGTATTTCAGTTTTGTAAGAGAACAAATTTCTTCTCTTAAAATAAGATTTAGAGTCAAGTATTATCATGGACTCATCCACGTTTTGTAGCACTTTTTTCAAAATTATAGCACAGGTAATAAGATATCTCAAAGTACATTAAAATGGCAAAAGTAAACAAAAACTCAACGGACCAAGCAAGACAAAACTAACAAAAGGAGCAAGATGGCATAAACAAGAAAAAGAACTCATAGCCCAAATGGGAAGAATACAAGAAAAGCTCACTCCAAACACGATCTAAGTTGAACCGACCAAAGAAAGTGTTAGGGACAACAAATCCTCTAACATATCTCCACAATACTTTGATATTGTATGTCTTGGACATAAATCTCATGACTTTGTTTTTGGTTTTTAAAAAAATAGGACTTTGGATGCACTCCAACAATCTTCCCAACCACCATAAAGTTTTTCTTCAAATAGTAATCCAATCGTGTTTACTCCTAAGCAATCACTTTTAACCAGACCAATTCCTCTTCCACATATCACAATGACTATGTCATTGAGGCACACCGGCACGACTAAGTCTAAGGGCATGACTCTGATATTGCTTGTAATTAGGGACAATGAATCCTCCAACATATTTCCACTATGGTATGATATTGTCCACGTTGGACATAACCGTCATAGCTTTGTTTTTTTGTTTCACAAAAAAAATCTCATACCATCAGAGATAGTTATCCTCACTTATATACTATAAATCTTCCCCTTATCTAGTCAATGTTGATAGTTGGTCACATTATTCCAACAAAAAGAGACCTACATCTAGCACACATACACCCTTCATGTAATCTTTATGAAGTAGACATCTCCATGGTTTATCATCTAAAGAAAGAGCTTGCAAGAAATGACTAGCTCTTCCATGAATCTTATCATTGCATTGTTGAGAATCCCATGAAATCTTATTGTTGCATTGTTGAGGATACCATGTTGAGGAAATGGGATAGATCACCTAACAATTATTTCATTTTTTAACAAGTTACTAGAGGATAGAAGGATCAAGAGGTGCATTAGGATATCTCAACTAGGTTGACACATCAGTAGCACCCCTAATCATATCCCCAAACCCAAAACTGATGCACTCATTAAAAAAAAAAAAAAAAAAAGTTCTATACATGGAAAGAGCTAGAGGAGAGCTCTTGTTTCAACAATCTATAAAACGATAAATGGACTATTACTTCGTTTGCTAATTAATTTTGACATGAAACTTATGTTTATCTAATATTTAGATCTTAATGTCAAGCAAACTCCATACTCTAGTCCAAAGAGATTGCCCCTATCTAATAATATGACATATATCAACCTCAACCACATAATCATTGTATGAGGTTGTCTTGCTAAGATTTATTGGTGACTTTGGATTGACCATCCGTTTACAGGTGGCTAGTGGTGCATGGTATACTTGAATCAAATTTTCTTCACAAAAGATGAGTTACAAACTGTACACCTAGGTCAGAAACTATGGACTTTGGAATACCTTGTAGACAGAATACTTTTCTGAAAAAAGGTTTGCATTACAAACATCATTAGACTTTTTACAAGCAATAAAATGTGTCATTTTACCAAAACTGTCAACCACGAACAAACCCCTTTTAAGTGTAAGGTAAAACAGATACAAAGTCCATAGACAGATCCTCTCATAACAAGCTAGGTGCTGGTAAATGAGTGTATATTGTATAGCCTTGCATTAGTGGATGTTCTTTTGGCTGTTTGACAAGTGAAACAAAGCTTCACATAATCTTGGACCTTTTTTCTCATAACAAGGTCTATTGTCTTATCTCAATCACAATGTCTAGCTAAACCGTCTGAATGCATATCCAATATAAGGGTAGTGAGTAACCCAACATGCAATCCTACTAATGTGAAGATTAAAACTCATAAAAGTATGTTGAAAATTGTCCTTTCTTTGCTTTTACAGGCTCAGCTATTCAAGGAGCAGAAAGAGAAGCTGATTGAAAAGGTAATTTTCATATTGTAAAAGATTTTCAGTTCATCATTCATATCAGATGACCAATTGTTCTTTTTGAATTTTAGATCATTGTACAATAGAAATAGATAGTGCATATCCATCCCTTAGATACTTGAAATTTGTTCTTTGAAGCTTTATTTAGCTTAATGAGTTAATTTTAAAATCAAATTCTTAATTTTATTAAAAAATTCAACCTAAACTGTGATAGATCACACACAAAAAAAGAAAAAAAAAACTTATAATCACGACTTTGAGTTTGACCTATAAGTTTGTTTGTTTCTTCAAAAATTCAAACCATGTTTTTTTTTTTTTTTCTAAAAAGAAAATGACATAAATTGGTTTTATTTTTAGAATTTAACTAAGAATTGAAGTGTAGAAAGGTGAAAATTATAACTGAGAAATTGAGAAGAAATAAATATAAATTTCAACAACCAAAAATGAAAAACGAAATTGCTATCGAACAAAAACTTAATTTTAGAATTTTGCTCGTATAACTAAAAAAAATTAGAGTTAGAAATTCAAAAATCTCATTATAGCATTTAGACAGGCTTAGAACATGGAGGAAGCCCCTCTTACTAGAATCCAAGACCAATCAAAGCAAGAATCTAACTTCTACGAGAACTCCAACTTACACTAAAATAAAAATTTTAAGAGAAAAACCAAATAAAAAATAGCCCTAAGACGAGAAAGCTGCCTAAAGAATTAGAGCTCATGAAAGAACATTGCACCCTTTGGATACATTTTCTAAACTTATTTTTTTTTCTCAAATTTGGTTAAGAATTCAAAAACTAAATACTTAAAACCAAATTATGAAAGTCCTAAGATGTTGAAATATTTAAAAAATTGATAAGACCATCTAAATAACATTCAGAACTACCAAACCTAAACATATAACATATAAACCAACGCTAACGTTGTCCATGACCACAGAAAAACATCCAAATAAATAGCCTACGCTTGTCCAACAACAACAAAAAAAAAAAAAAAAAAAAAAAATTGCTTAGAAATGATACCAACTAATTAAGTATCATTAATTTGATATATTTAGCGTAAAGTGTTTGATATATTTAGAAATGATAATTGATGTGATTAGAGTGTTGATATATTTAAATTTACCATAACTAATTAATGTGGAACTCATTTTCCTAATCAATGTGGAACTTTGGTCCTACATAAAATTGGTTATCAAACGCTTCTATATATTTCTCAAAAATTGCAAGCAAGAATAAATGTTACCAAATTACCCTATGAATTATTATGTTCTTTTTTATTAATTAAATAAAAAAGAAGAAATAAGAAAATTGATACAAAAACATAAAGAAGAAACTAGAATTGTTAGGATAACAAACCTCAAGATAACTCCACTATAATATGACATTTTTTACTTTGGGCAGAAATCTTCATGGCTTTACTTTTGGTTCTACCCAAAAGGACTCATACCATTTGGAGATAGTTGTCCTGATCTTTCTCTTATGCTAATGAGGGACTTCGGTTGTATTCTTAACAATCCTCCTATCTAACAAAAAATCACCAAGCCTCCCCTCAATAGTCATCTCTCTCCAAATTACGCTTGAGCACACCGCTTGTCTGGAAGCTTAACCATGTATAGATACCACCATGACTACATCTTCTTCTTTGTTCGGTACTCAAGGATTCTATTGACATGACTACATCAAGGTCTGCTCTAATACCACTTGTTAGGGACAACATACCTTCATATATCTCCACAAGGTTAAGAATGATCTTACATATAAGATCAATGGCAAAGTTGGTAGAGTAAAAACTAACAAATATTGAAGAAACATGGATTCTATCAAAAAAAAAAAAAAACAATTAACAACCAGAGAAGTAACCTCCATATCTTATAAAGAGTATGAGGTCTCTCTAATTTTTCAATGTGGTATCCTCAACAATAAAGGCTAAATTTCATTGATAAGGTGAAATTATAAATAGAGAAATTTCTATTCAATAGATTACCAAGAAAAAATAATAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTCCCCAATTAGGTCATCATATTAGTTAAGACTGTAATTAAAAAAAAAAAAAAAGAGGGCTTAATTTACACCAAAGGTAAGAAGGCTTATACTTTTAACATTTATTTGTACTAGCCCTTTTGAAGTTCAAATTCTTGTAGTGTGTCATTTTTTTTCTCAATTCCATTATTGATAGTGGTACTTATGAAATCTTCTGATATATGCGGGAAGGTTCAGAACTAAATTGCAAGTATTTATTTGATTTTTTTTTCTTTTAAATCAAGCTTATAAACATTACTTTCTCCGTAAATTTATTTGTTTTGAAAACTTAAAAATAGGTCACATTTGATGACAACTTTCATTTTAATTAGGTTTTTGCTTTGGAAATTTACACTTGTTTCATTCCATTTTCATAATTAGAGTTTTCATATTTCTTTAAGAAACACTTCAATTCTATTGGGAATGTAACCAAAGTTCTACATTGGCTAGATAAGGAGAATATTATGGGTATAGTATATAAGTACAGATAATTATCTTCATTGGTATGAGGCATTTTGGGTAAAACCAAAAACAAAACCATGAGGACCTATGCCCAAAGTGGACAATATCATAGCATTTTGTGGAGATATTTGGAGAATACCTAGTCAAATTCTAAAAAACAAAAACTACATTTTTTAGTCTTCAAATTTTGAATTGGTGTTTGAAAACATTTATTGAAAGTTGATAATAAAACATAGAAACTTATAGGTGGGAGAAGTGTTTATAAGTTTAACTTTTAAAAAACCAAAAACCACAAACGAAATGGTAATTAAACGAGATGGTAGTTTTCATAAACTTGTTTTTATTTATAGAATTTGACTCAAAACTCAAATGTTTCTTAAAGAAAGATAAAAACTATATTGAGAAAATTGAGAGGAAACGGATAGAAAACACATATTAGTTTCAAAAGTAGAAAACTAAAAATCAAATCATTATCCAACAACATTTTAATATTCTCTGGCAATTAATTTAGACTTTTCTCCAGTTGTAATTTAATTTCTATTCATACTTTCTCTATCTAAACCTGCATTAGTTGATGAATGCAAAACCAAGACAAATGATAGGCAATATGCCTAGAGAAAAACATTTTCTAACTTTTGATAAATATTTTATCCAGATACTTACATATATGATATTTAGATTCCATCCTCAATCTTACAAAAAGTGAATGCTTACATGAGGATTGCCTTGCATAAGCTTGACTTTCTGTCATATTTTTAATGTTCATGCTTGTATGTATGTATTCATAAATGTACTTTAGATATATCTATTTATATTTTGCATATGCATTATTTTGATTATTTATTTATTTTGTTGAATCAGGGGAAACTCCTTTTAGAAGAAAATCTAAAGTTATCTGCAAAGGTAAGGCCTCATTTTTCAATTATTCTTAAAAGGCTACATCTTTCTAATAACATTTGCTAAAAATCACAACAAAACTAAAATATTGGGCTTGCTTCAGACTGTCTCTAAATGAAAAATTCTTCTGTTAACTTATTGAAAAAATATATCAAAGGCCATGTTTGAGGGCTATGTTCATGAGTAGACTTAATTTTTTCTTTTAATATAGTTTTGTACTATAGTTGAATTTATGGTATACTTGTTGAGCTGATACATAGAAGAATAGTTTCAATCTTTTTTTTTTTTCTTTTCATACTAAATTTTGTTCTCAAAAATCCAAAAACTACTTTGGGAAATAGCTATGAAATTTTCAAAATGCATGATCAAACTCCATGAAAATATTGGAAACAAGAACAAAGTTTGGAATTTCTACACTTACACATATATATAAAGGGCCGGTTTTGGGTAAGGAGTAGAGTTGTTTAGTCGTAGAGTCTATAGTGTAAGGAGTTAGTAAGTCATAAAATTAATTTTTTTTAGTCGTGTGGCCTACAATGAGTTTTAGAACTCCGTTGGCCAAACATCACTCCATTTCCAACTCCTATTTTTTGAGTCAAACATGTCCTTATAGCTGTTTTGTACAAGCTAGAGTCTTTCAATTTTGATATTCAGAGAGGAGTGGCAAATGAGAGTTAAAACTTTAAAATCCTAACATTTTCATATTATGTTTAATATAAAATAAATTGAGAGAAAGACAATTGTGCCCCTCATACCTTCTTCATTCTACCCATTGGTTGGAAACTTTTTCTGGTTTTAAATAGAATATCGAAACTTTAATTTGAAATATACATTATAAGTATGGTTTTGTAATATATAAATATTTGTGTTCATTTTGCTAATACATTTATTTTGGACATTATTATTATACATTAGTGTGGTACTAAGCCGTGGCAAGAAGGTGGTTTTGAAGGAGAGGGAGGCATAATGAGCAATTTATGCAGCCAAAGTAGCCAAGGTCCTGACATGCAGACTGAATTGTTCATTGGATTGCCTTGCTCATAACAATGGAGAAGCTATAGCTATACGTTCATGAAAGTTATTTTAATTAACAAACAAA

mRNA sequence

TTTTAATGGTTCAGCATGCAAAAGACAATTGAACGGTACCGTAGCTATGGGAAAGATGGACAAACCAACCCTTTTCGATCAGAAGGATATATGCAGCAACTGAAGCAAGAAGCTGACATGACAGCAAAGAAAATCGAGCAACTTGAAAAATCACAAGAGAAGCTTTTGGGACGTGGGTTGGATTCTTGTTCCTTTGAGGAACTTCGAGGGATTGAAAGACAGTTGGTACATAGCTTAACCCGTATTAGAGAAACCAAGGCTCAGCTATTCAAGGAGCAGAAAGAGAAGCTGATTGAAAAGGGGAAACTCCTTTTAGAAGAAAATCTAAAGTTATCTGCAAAGTGTGGTACTAAGCCGTGGCAAGAAGGTGGTTTTGAAGGAGAGGGAGGCATAATGAGCAATTTATGCAGCCAAAGTAGCCAAGGTCCTGACATGCAGACTGAATTGTTCATTGGATTGCCTTGCTCATAACAATGGAGAAGCTATAGCTATACGTTCATGAAAGTTATTTTAATTAACAAACAAA

Coding sequence (CDS)

ATGCAAAAGACAATTGAACGGTACCGTAGCTATGGGAAAGATGGACAAACCAACCCTTTTCGATCAGAAGGATATATGCAGCAACTGAAGCAAGAAGCTGACATGACAGCAAAGAAAATCGAGCAACTTGAAAAATCACAAGAGAAGCTTTTGGGACGTGGGTTGGATTCTTGTTCCTTTGAGGAACTTCGAGGGATTGAAAGACAGTTGGTACATAGCTTAACCCGTATTAGAGAAACCAAGGCTCAGCTATTCAAGGAGCAGAAAGAGAAGCTGATTGAAAAGGGGAAACTCCTTTTAGAAGAAAATCTAAAGTTATCTGCAAAGTGTGGTACTAAGCCGTGGCAAGAAGGTGGTTTTGAAGGAGAGGGAGGCATAATGAGCAATTTATGCAGCCAAAGTAGCCAAGGTCCTGACATGCAGACTGAATTGTTCATTGGATTGCCTTGCTCATAA

Protein sequence

MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSFEELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGFEGEGGIMSNLCSQSSQGPDMQTELFIGLPCS

Homology

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BLAST of ClCG01G005350 vs. Swiss-Prot
Match: AGL42_ARATH (MADS-box protein AGL42 OS=Arabidopsis thaliana GN=AGL42 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 74/149 (49.66%), Postives = 92/149 (61.74%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR Y KD +T+   S+ ++QQLKQEA     KIE LE  + KLLG+G+ SCS 
Sbjct: 62  MQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCSL 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EEL+ I+ QL  SL ++RE KAQLFKEQ EKL  K K LLEEN+KL  K    PW+    
Sbjct: 122 EELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSST 181

Query: 121 EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
           + +               +++T+LFIGLP
Sbjct: 182 DQQ----QEKYKVIDLNLEVETDLFIGLP 206

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BLAST of ClCG01G005350 vs. Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-25
Identity = 73/154 (47.40%), Postives = 90/154 (58.44%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ TI+RY  + KD  +    SE  MQ LK EA    KKIEQLE S+ KLLG G+ +CS 
Sbjct: 62  MQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSI 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCG---TKPWQE 120
           EEL+ IE+QL  S+  IR  K Q+FKEQ E+L +K K L  EN KLS K G   ++ W  
Sbjct: 122 EELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVWSN 181

Query: 121 GGFEGEGGIMSNLCSQSSQGPDMQTELFIGLPCS 152
              E  G        +SS   +++T+LFIGLPCS
Sbjct: 182 KNQESTG----RGDEESSPSSEVETQLFIGLPCS 211

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BLAST of ClCG01G005350 vs. Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 62/150 (41.33%), Postives = 82/150 (54.67%), Query Frame = 1


Query: 2   QKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSFE 61
           QKTIERYR+Y K+   N    +  ++Q+K +AD  AKK+E LE  + KLLG  LD CS E
Sbjct: 63  QKTIERYRTYTKENIGNKTVQQD-IEQVKADADGLAKKLEALETYKRKLLGEKLDECSIE 122

Query: 62  ELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF- 121
           EL  +E +L  SL  IR  K +L +EQ  KL EK   L ++N +L  KC  +P       
Sbjct: 123 ELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPPLSAPLT 182

Query: 122 -EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
              E        + ++   D++TELFIGLP
Sbjct: 183 VRAEDENPDRNINTTNDNMDVETELFIGLP 211

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BLAST of ClCG01G005350 vs. Swiss-Prot
Match: AGL71_ARATH (MADS-box protein AGL71 OS=Arabidopsis thaliana GN=AGL71 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPF------RSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRG 60
           M+K I+RY  +     +N F      + E Y+Q+LK E D   KKI+ LE    KLLG+G
Sbjct: 62  MEKIIDRYGKF-----SNAFYVAERPQVERYLQELKMEIDRMVKKIDLLEVHHRKLLGQG 121

Query: 61  LDSCSFEELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKP 120
           LDSCS  EL+ I+ Q+  SL  +R  KA+L+ +Q +KL EK + LL E  +L  +     
Sbjct: 122 LDSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRLLEEVNMHH 181

Query: 121 WQEGGFEGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
             +G  EG          ++    +++T+LFIGLP
Sbjct: 182 SSKGNTEGG--------HRTKHSSEVETDLFIGLP 203

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BLAST of ClCG01G005350 vs. Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-17
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 1


Query: 3   KTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSFEE 62
           KT+ERY+   +D  +N  R++   QQ K E    A+KIE LE S  K++G GLD+ S EE
Sbjct: 65  KTVERYQKRIQDLGSNHKRNDN-SQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEE 124

Query: 63  LRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGFEG 122
           L+ +E QL  SL +IR  K QL +E+ EKL EK + L+ EN  L  KC          E 
Sbjct: 125 LQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKC----------EM 184

Query: 123 EG-GIMSNLCSQSSQGP--------DMQTELFIGLP 150
           +G GI+  + S SS           ++ T+LFIG P
Sbjct: 185 QGRGIIGRISSSSSTSELDIDDNEMEVVTDLFIGPP 209

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BLAST of ClCG01G005350 vs. TrEMBL
Match: A0A0A0KL39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172800 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-65
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR +GKDGQ+NPFRSEGYMQQLKQEA+MTAKKIEQLEKSQ+KLLGRGLDSCSF
Sbjct: 62  MQKTIERYRKHGKDGQSNPFRSEGYMQQLKQEAEMTAKKIEQLEKSQQKLLGRGLDSCSF 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EE+R IERQLV SLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQE G 
Sbjct: 122 EEIREIERQLVLSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEEGV 181

Query: 121 EGEGGI--MSNLCSQS--SQGPD--MQTELFIGLPCS 152
           EG+GGI  MSNLCSQS  SQ  D  MQT+LFIGL CS
Sbjct: 182 EGDGGINMMSNLCSQSTNSQASDHHMQTDLFIGLSCS 218

[Close]

BLAST of ClCG01G005350 vs. TrEMBL
Match: A0A097SRT6_9ROSA (SOC1-like protein OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.3e-29
Identity = 80/150 (53.33%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ TI+RY  + K GQTN    E Y++QLK E+   AKKIE LE SQ KLLG GLDSCS 
Sbjct: 62  MQDTIKRYHKHAKAGQTNKIEVEEYVEQLKHESTAMAKKIENLEASQRKLLGHGLDSCSV 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKP-WQEGG 120
           EEL+ I  QL  S+  IRE KA LF EQ E+L  K +LLLEEN KLS + G +P  Q+  
Sbjct: 122 EELQEITGQLERSVRNIRERKAHLFAEQMEQLRAKERLLLEENAKLSEEFGAQPRLQQLS 181

Query: 121 FEGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
            E +G +  +  SQSS   +++TELFIG P
Sbjct: 182 VEEKGAV--SYWSQSSLSSEVETELFIGPP 209

[Close]

BLAST of ClCG01G005350 vs. TrEMBL
Match: D1MFS7_HEVBR (MADS-box transcription factor 2 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.0e-29
Identity = 77/149 (51.68%), Postives = 98/149 (65.77%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ+TIERYR + KD Q +  +S+  M+ LK EA    KKIE LE S+ KLLG GLDSC+ 
Sbjct: 62  MQETIERYRRHVKDNQIDEKKSDENMELLKTEAANMVKKIELLEISKRKLLGEGLDSCTV 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EEL+ IE+QL  S++ IR  K Q+FKEQ E+L EK   L  EN +LS KCG +PW+    
Sbjct: 122 EELQQIEQQLERSVSSIRARKNQVFKEQIERLKEKESQLAAENARLSEKCGVQPWEGLKV 181

Query: 121 EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
            GE    +  C +SS   D++TELFIGLP
Sbjct: 182 VGE----TRYCEESSLVSDVETELFIGLP 206

[Close]

BLAST of ClCG01G005350 vs. TrEMBL
Match: A7LLT6_CITSI (SOC1-like protein 2 OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-28
Identity = 77/149 (51.68%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKT+ERY  Y ++ Q +    E YMQQLK E     +KIE +E SQ KLLG+ L S + 
Sbjct: 62  MQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTN 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EEL+ ++ QL  SL  IR  KAQLF EQ  +L EK +LLLE+N +L  KCG KPWQ+   
Sbjct: 122 EELQELDDQLERSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQ 181

Query: 121 EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
             E     N CSQS Q  D++TELFIGLP
Sbjct: 182 RKEA---VNNCSQSGQSSDIETELFIGLP 207

[Close]

BLAST of ClCG01G005350 vs. TrEMBL
Match: A0A0K1Z622_PRUMU (SOC1-like protein 2 OS=Prunus mume PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-28
Identity = 79/154 (51.30%), Postives = 99/154 (64.29%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ+TI+RY  + K GQTN    E Y++QLK E+   AKKIE LE SQ KLLG GLDSCS 
Sbjct: 62  MQETIKRYHKHAKAGQTNKIEVEEYVEQLKHESTAMAKKIENLEASQRKLLGHGLDSCSV 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKP-----W 120
           EEL+ I  QL  S+ +IRE KA LF EQ E+L  K +LLLEEN KLS + G +P      
Sbjct: 122 EELQEITGQLERSVRKIRERKAHLFAEQMEQLRAKERLLLEENAKLSEEFGAQPRLLLQQ 181

Query: 121 QEGGFEGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
           Q+   E +G +  +  S SS   +++TELFIG P
Sbjct: 182 QQLSVEEKGAV--SYWSLSSPSSEVETELFIGPP 213

[Close]

BLAST of ClCG01G005350 vs. TAIR10
Match: AT5G62165.1 (AT5G62165.1 AGAMOUS-like 42)

HSP 1 Score: 127.1 bits (318), Expect = 9.2e-30
Identity = 74/149 (49.66%), Postives = 92/149 (61.74%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR Y KD +T+   S+ ++QQLKQEA     KIE LE  + KLLG+G+ SCS 
Sbjct: 62  MQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCSL 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EEL+ I+ QL  SL ++RE KAQLFKEQ EKL  K K LLEEN+KL  K    PW+    
Sbjct: 122 EELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSST 181

Query: 121 EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
           + +               +++T+LFIGLP
Sbjct: 182 DQQ----QEKYKVIDLNLEVETDLFIGLP 206

[Close]

BLAST of ClCG01G005350 vs. TAIR10
Match: AT2G45660.1 (AT2G45660.1 AGAMOUS-like 20)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-26
Identity = 73/154 (47.40%), Postives = 90/154 (58.44%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ TI+RY  + KD  +    SE  MQ LK EA    KKIEQLE S+ KLLG G+ +CS 
Sbjct: 62  MQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSI 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCG---TKPWQE 120
           EEL+ IE+QL  S+  IR  K Q+FKEQ E+L +K K L  EN KLS K G   ++ W  
Sbjct: 122 EELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVWSN 181

Query: 121 GGFEGEGGIMSNLCSQSSQGPDMQTELFIGLPCS 152
              E  G        +SS   +++T+LFIGLPCS
Sbjct: 182 KNQESTG----RGDEESSPSSEVETQLFIGLPCS 211

[Close]

BLAST of ClCG01G005350 vs. TAIR10
Match: AT4G11880.1 (AT4G11880.1 AGAMOUS-like 14)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 1


Query: 3   KTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSFEE 62
           KT+ERY+   +D  +N  R++   QQ K E    A+KIE LE S  K++G GLD+ S EE
Sbjct: 65  KTVERYQKRIQDLGSNHKRNDN-SQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEE 124

Query: 63  LRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGFEG 122
           L+ +E QL  SL +IR  K QL +E+ EKL EK + L+ EN  L  KC          E 
Sbjct: 125 LQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKC----------EM 184

Query: 123 EG-GIMSNLCSQSSQGP--------DMQTELFIGLP 150
           +G GI+  + S SS           ++ T+LFIG P
Sbjct: 185 QGRGIIGRISSSSSTSELDIDDNEMEVVTDLFIGPP 209

[Close]

BLAST of ClCG01G005350 vs. TAIR10
Match: AT4G22950.1 (AT4G22950.1 AGAMOUS-like 19)

HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18
Identity = 61/149 (40.94%), Postives = 79/149 (53.02%), Query Frame = 1


Query: 4   TIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSFEEL 63
           TIERY+   K+   N  R++   QQ + E     KKIEQLE S+ KLLG G+D+CS EEL
Sbjct: 65  TIERYQRRIKEIGNNHKRNDN-SQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEEL 124

Query: 64  RGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGFEGE 123
           + +E QL  SL+RIR  K QL +E+ EKL  + + L++EN  L  K     W   G    
Sbjct: 125 QQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK-----WLGMGTATI 184

Query: 124 GGIMSNLCSQS---SQGPDMQTELFIGLP 150
               S L S         +++T LFIG P
Sbjct: 185 ASSQSTLSSSEVNIDDNMEVETGLFIGPP 207

[Close]

BLAST of ClCG01G005350 vs. TAIR10
Match: AT5G51870.3 (AT5G51870.3 AGAMOUS-like 71)

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-16
Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPF------RSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRG 60
           M+K I+RY  +     +N F      + E Y+Q+LK E D   KKI+ LE    KLLG+G
Sbjct: 62  MEKIIDRYGKF-----SNAFYVAERPQVERYLQELKMEIDRMVKKIDLLEVHHRKLLGQG 121

Query: 61  LDSCSFEELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCG--- 120
           LDSCS  EL+ I+ Q+  SL  +R  KA+L+ +Q +KL EK + LL E  +L  +     
Sbjct: 122 LDSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRLLEEQNRER 181

Query: 121 -TKPWQEGGFE------GEGGIMSNLCSQSSQGPDMQTELFIGLP 150
             +P      +       EGG       ++    +++T+LFIGLP
Sbjct: 182 LMRPVVPATLQICDKGNTEGG------HRTKHSSEVETDLFIGLP 215

[Close]

BLAST of ClCG01G005350 vs. NCBI nr
Match: gi|778700554|ref|XP_011654887.1| (PREDICTED: MADS-box protein SOC1 isoform X2 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR +GKDGQ+NPFRSEGYMQQLKQEA+MTAKKIEQLEKSQ+KLLGRGLDSCSF
Sbjct: 62  MQKTIERYRKHGKDGQSNPFRSEGYMQQLKQEAEMTAKKIEQLEKSQQKLLGRGLDSCSF 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EE+R IERQLV SLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQE G 
Sbjct: 122 EEIREIERQLVLSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEEGV 181

Query: 121 EGEGGI--MSNLCSQS--SQGPD--MQTELFIGLPCS 152
           EG+GGI  MSNLCSQS  SQ  D  MQT+LFIGL CS
Sbjct: 182 EGDGGINMMSNLCSQSTNSQASDHHMQTDLFIGLSCS 218

[Close]

BLAST of ClCG01G005350 vs. NCBI nr
Match: gi|449451791|ref|XP_004143644.1| (PREDICTED: MADS-box protein SOC1 isoform X1 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR +GKDGQ+NPFRSEGYMQQLKQEA+MTAKKIEQLEKSQ+KLLGRGLDSCSF
Sbjct: 77  MQKTIERYRKHGKDGQSNPFRSEGYMQQLKQEAEMTAKKIEQLEKSQQKLLGRGLDSCSF 136

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EE+R IERQLV SLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQE G 
Sbjct: 137 EEIREIERQLVLSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEEGV 196

Query: 121 EGEGGI--MSNLCSQS--SQGPD--MQTELFIGLPCS 152
           EG+GGI  MSNLCSQS  SQ  D  MQT+LFIGL CS
Sbjct: 197 EGDGGINMMSNLCSQSTNSQASDHHMQTDLFIGLSCS 233

[Close]

BLAST of ClCG01G005350 vs. NCBI nr
Match: gi|659073095|ref|XP_008467250.1| (PREDICTED: MADS-box protein SOC1-like [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39
Identity = 86/95 (90.53%), Postives = 92/95 (96.84%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQKTIERYR +GK+GQ+NPFRSEGYMQQLKQEA+MTAKKIEQLEKSQ+KLLGRGLDSCSF
Sbjct: 62  MQKTIERYRKHGKEGQSNPFRSEGYMQQLKQEAEMTAKKIEQLEKSQQKLLGRGLDSCSF 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEK 96
           EELR IERQLV SLTRIRETKAQLFK+QKEKLIEK
Sbjct: 122 EELREIERQLVLSLTRIRETKAQLFKDQKEKLIEK 156

[Close]

BLAST of ClCG01G005350 vs. NCBI nr
Match: gi|700405969|gb|AIU94286.1| (SOC1-like protein [Prunus pseudocerasus])

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-29
Identity = 80/150 (53.33%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ TI+RY  + K GQTN    E Y++QLK E+   AKKIE LE SQ KLLG GLDSCS 
Sbjct: 62  MQDTIKRYHKHAKAGQTNKIEVEEYVEQLKHESTAMAKKIENLEASQRKLLGHGLDSCSV 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKP-WQEGG 120
           EEL+ I  QL  S+  IRE KA LF EQ E+L  K +LLLEEN KLS + G +P  Q+  
Sbjct: 122 EELQEITGQLERSVRNIRERKAHLFAEQMEQLRAKERLLLEENAKLSEEFGAQPRLQQLS 181

Query: 121 FEGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
            E +G +  +  SQSS   +++TELFIG P
Sbjct: 182 VEEKGAV--SYWSQSSLSSEVETELFIGPP 209

[Close]

BLAST of ClCG01G005350 vs. NCBI nr
Match: gi|269314025|gb|ACZ36915.1| (MADS-box transcription factor 2 [Hevea brasiliensis])

HSP 1 Score: 136.3 bits (342), Expect = 4.3e-29
Identity = 77/149 (51.68%), Postives = 98/149 (65.77%), Query Frame = 1


Query: 1   MQKTIERYRSYGKDGQTNPFRSEGYMQQLKQEADMTAKKIEQLEKSQEKLLGRGLDSCSF 60
           MQ+TIERYR + KD Q +  +S+  M+ LK EA    KKIE LE S+ KLLG GLDSC+ 
Sbjct: 62  MQETIERYRRHVKDNQIDEKKSDENMELLKTEAANMVKKIELLEISKRKLLGEGLDSCTV 121

Query: 61  EELRGIERQLVHSLTRIRETKAQLFKEQKEKLIEKGKLLLEENLKLSAKCGTKPWQEGGF 120
           EEL+ IE+QL  S++ IR  K Q+FKEQ E+L EK   L  EN +LS KCG +PW+    
Sbjct: 122 EELQQIEQQLERSVSSIRARKNQVFKEQIERLKEKESQLAAENARLSEKCGVQPWEGLKV 181

Query: 121 EGEGGIMSNLCSQSSQGPDMQTELFIGLP 150
            GE    +  C +SS   D++TELFIGLP
Sbjct: 182 VGE----TRYCEESSLVSDVETELFIGLP 206

The following BLAST results are available for this feature:

BLAST of ClCG01G005350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL42_ARATH	1.6e-28	49.66	MADS-box protein AGL42 OS=Arabidopsis thaliana GN=AGL42 PE=2 SV=1	[more]
SOC1_ARATH	3.8e-25	47.40	MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1	[more]
MAD50_ORYSJ	1.4e-19	41.33	MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 ...	[more]
AGL71_ARATH	1.3e-17	37.42	MADS-box protein AGL71 OS=Arabidopsis thaliana GN=AGL71 PE=2 SV=1	[more]
AGL14_ARATH	4.9e-17	40.38	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=1 SV=2	[more]

BLAST of ClCG01G005350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL39_CUCSA	1.2e-65	86.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172800 PE=4 SV=1	[more]
A0A097SRT6_9ROSA	2.3e-29	53.33	SOC1-like protein OS=Prunus pseudocerasus PE=2 SV=1	[more]
D1MFS7_HEVBR	3.0e-29	51.68	MADS-box transcription factor 2 OS=Hevea brasiliensis PE=2 SV=1	[more]
A7LLT6_CITSI	1.1e-28	51.68	SOC1-like protein 2 OS=Citrus sinensis PE=2 SV=1	[more]
A0A0K1Z622_PRUMU	1.1e-28	51.30	SOC1-like protein 2 OS=Prunus mume PE=2 SV=1	[more]

BLAST of ClCG01G005350 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62165.1	9.2e-30	49.66	AGAMOUS-like 42	[more]
AT2G45660.1	2.1e-26	47.40	AGAMOUS-like 20	[more]
AT4G11880.1	2.8e-18	40.38	AGAMOUS-like 14	[more]
AT4G22950.1	4.7e-18	40.94	AGAMOUS-like 19	[more]
AT5G51870.3	2.6e-16	35.76	AGAMOUS-like 71	[more]

BLAST of ClCG01G005350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700554\|ref\|XP_011654887.1\|	1.7e-65	86.62	PREDICTED: MADS-box protein SOC1 isoform X2 [Cucumis sativus]	[more]
gi\|449451791\|ref\|XP_004143644.1\|	1.7e-65	86.62	PREDICTED: MADS-box protein SOC1 isoform X1 [Cucumis sativus]	[more]
gi\|659073095\|ref\|XP_008467250.1\|	1.6e-39	90.53	PREDICTED: MADS-box protein SOC1-like [Cucumis melo]	[more]
gi\|700405969\|gb\|AIU94286.1\|	3.3e-29	53.33	SOC1-like protein [Prunus pseudocerasus]	[more]
gi\|269314025\|gb\|ACZ36915.1\|	4.3e-29	51.68	MADS-box transcription factor 2 [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008152	metabolic process
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0010150	leaf senescence
biological_process	GO:0080187	floral organ senescence
biological_process	GO:0009838	abscission
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0044699	single-organism process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G005350.1	ClCG01G005350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 27..110 score: 3.6
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 26..116 score: 13
None	No IPR available	unknown	Coil	Coil	coord: 26..46 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..149 score: 1.1
None	No IPR available	PANTHER	PTHR11945:SF208	MADS-BOX PROTEIN SOC1	coord: 1..149 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G005350	Csa5G172800	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G005350	MELO3C005393	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G005350	Cla002356	Watermelon (97103) v1	wcgwmB145
ClCG01G005350	Cla97C01G005560	Watermelon (97103) v2	wcgwmbB089
ClCG01G005350	Bhi12G000642	Wax gourd	wcgwgoB197
ClCG01G005350	CSPI05G08210	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G005350	Cucsa.115490	Cucumber (Gy14) v1	cgywcgB170
ClCG01G005350	Cucsa.251140	Cucumber (Gy14) v1	cgywcgB447
ClCG01G005350	CmaCh15G013960	Cucurbita maxima (Rimu)	cmawcgB256
ClCG01G005350	CmaCh02G010250	Cucurbita maxima (Rimu)	cmawcgB519
ClCG01G005350	CmoCh02G010410	Cucurbita moschata (Rifu)	cmowcgB517
ClCG01G005350	CmoCh15G014620	Cucurbita moschata (Rifu)	cmowcgB244
ClCG01G005350	Lsi05G012770	Bottle gourd (USVL1VR-Ls)	lsiwcgB328
ClCG01G005350	Cp4.1LG13g00520	Cucurbita pepo (Zucchini)	cpewcgB168
ClCG01G005350	Cp4.1LG05g06920	Cucurbita pepo (Zucchini)	cpewcgB640
ClCG01G005350	CsGy5G005590	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G005350	MELO3C005393.2	Melon (DHL92) v3.6.1	medwcgB017
ClCG01G005350	Carg20784	Silver-seed gourd	carwcgB0716
ClCG01G005350	Carg08452	Silver-seed gourd	carwcgB0688
ClCG01G005350	CsaV3_5G005600	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G005350	Bottle gourd (USVL1VR-Ls)	lsiwcgB008