ClCG01G000070 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G000070
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family LENGTH=213
LocationCG_Chr01 : 65047 .. 65682 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAGCAAACGTAAAATCCCCCAAACACTGCGCCAATAAGCAAGAACTGAAGATTCAGAAGCGGTACAAGAAGCTGTTCCTTGGAGTTTCGGCATTTTTATCCATCATTTCCTTGCTCATACTGCTTCTCTGGCTCATCCTTCATCCCTCCAAGCCAGAATTCAGAGTGAAACAGGCGGATGTGTATCAGCTTAACCTCATAGACCTTCACCTTCTCAACTCCTCCATCCAACTCACTCTCTCCTCAAAAAACCCTAATCACAGAGTGGGAATCTACTACGACCACCTTCAAGTATACGCCGTTTATAAGGGGCAACAGATAACTCTTCCTACCTCCCTCCCGCCTTTCTACCAGGGCTCTCAAGAAGCCAATTTGCTGACGGCTTTCTTGGCCGGCACCACCCTGCCGGTGGCTCCTTCGTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTGAATCTGAAAGCCATGGGACGCCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTACCGGTTTAATGTGGATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACACCTCCACTCACTTTGAAACAACCAACTTCCTGCTCTACAACCCTTTAA

mRNA sequence

ATGTCTCTAGCAAACGTAAAATCCCCCAAACACTGCGCCAATAAGCAAGAACTGAAGATTCAGAAGCGGTACAAGAAGCTGTTCCTTGGAGTTTCGGCATTTTTATCCATCATTTCCTTGCTCATACTGCTTCTCTGGCTCATCCTTCATCCCTCCAAGCCAGAATTCAGAGTGAAACAGGCGGATGTGTATCAGCTTAACCTCATAGACCTTCACCTTCTCAACTCCTCCATCCAACTCACTCTCTCCTCAAAAAACCCTAATCACAGAGTGGGAATCTACTACGACCACCTTCAAGTATACGCCGTTTATAAGGGGCAACAGATAACTCTTCCTACCTCCCTCCCGCCTTTCTACCAGGGCTCTCAAGAAGCCAATTTGCTGACGGCTTTCTTGGCCGGCACCACCCTGCCGGTGGCTCCTTCGTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTGAATCTGAAAGCCATGGGACGCCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTACCGGTTTAATGTGGATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACACCTCCACTCACTTTGAAACAACCAACTTCCTGCTCTACAACCCTTTAA

Coding sequence (CDS)

ATGTCTCTAGCAAACGTAAAATCCCCCAAACACTGCGCCAATAAGCAAGAACTGAAGATTCAGAAGCGGTACAAGAAGCTGTTCCTTGGAGTTTCGGCATTTTTATCCATCATTTCCTTGCTCATACTGCTTCTCTGGCTCATCCTTCATCCCTCCAAGCCAGAATTCAGAGTGAAACAGGCGGATGTGTATCAGCTTAACCTCATAGACCTTCACCTTCTCAACTCCTCCATCCAACTCACTCTCTCCTCAAAAAACCCTAATCACAGAGTGGGAATCTACTACGACCACCTTCAAGTATACGCCGTTTATAAGGGGCAACAGATAACTCTTCCTACCTCCCTCCCGCCTTTCTACCAGGGCTCTCAAGAAGCCAATTTGCTGACGGCTTTCTTGGCCGGCACCACCCTGCCGGTGGCTCCTTCGTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTGAATCTGAAAGCCATGGGACGCCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTACCGGTTTAATGTGGATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACACCTCCACTCACTTTGAAACAACCAACTTCCTGCTCTACAACCCTTTAA

Protein sequence

MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL
Homology
[Close]
BLAST of ClCG01G000070 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 70/156 (44.87%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 31  VSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLNSSIQLTLSSKNPNHR 90
           +  F+ I+ + I L+W+IL P+KP F ++ A VY  NL   +LL S+ Q+T++S+N N R
Sbjct: 25  IIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSR 84

Query: 91  VGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPVAPSFGYEVGRD 150
           +GIYYD L VYA Y+ QQITL T++PP YQG +E N+ + F+ G ++P+AP     +G +
Sbjct: 85  IGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDE 144

Query: 151 QSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVA 187
           Q+ G   L ++A GR+RWKVG+ ++G Y  +V C A
Sbjct: 145 QNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

[Close]
BLAST of ClCG01G000070 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 48/163 (29.45%), Postives = 84/163 (51.53%), Query Frame = 1 

Query: 27  LFLGVSAFLSIISLL---ILLLWLILHPSKPEFRVKQADVYQLNLIDL-HLLNSSIQLTL 86
           L L V   +S+I +L    L+ WLI+ P   +F V  A + + +     ++L  ++ LT+
Sbjct: 38  LSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTV 97

Query: 87  SSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPV-AP 146
             +NPN R+G+YYD ++ +A Y+G++ +  T L PFYQG +   +LT    G  L +   
Sbjct: 98  PVRNPNKRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNA 157

Query: 147 SFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDC 185
                +  ++ +G + + +K   R+R+K+G       +  VDC
Sbjct: 158 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]
BLAST of ClCG01G000070 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.7e-12
Identity = 42/172 (24.42%), Postives = 82/172 (47.67%), Query Frame = 1 

Query: 37  IISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYD 96
           ++ +  L++WLI  P+  +F V  A + +  L   + L  ++ L  + +NPN R+G+YYD
Sbjct: 58  LLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYD 117

Query: 97  HLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPVAP-SFGYEVGRDQSAGR 156
            ++V   Y  Q+  +  ++  FYQG +   ++   L G  L +       ++  D ++  
Sbjct: 118 EIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI 177

Query: 157 FVLNLKAMGRLRWKVGSWVSGGYRFNVDCVAVMPFGPTLPTPPLTLKQPTSC 208
           + ++ K   ++R+K G   S  ++  + C   +P   T  +    + QPT C
Sbjct: 178 YRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPL--TSNSTSGFVFQPTKC 227

[Close]
BLAST of ClCG01G000070 vs. TrEMBL
Match: A0A0A0KN27_CUCSA (NDR1/HIN1-like protein OS=Cucumis sativus GN=Csa_5G139020 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-106
Identity = 195/212 (91.98%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MSLA+VKSPKHCANKQE+K+QKRYKKLFLGVSAFLS ISLLILLLWLIL PSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLID-LHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLID LHLLNSSIQLTLSSKNPNHR+GIYYD+LQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG QE NLLTAFLAG+ +PVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           FNV+CVAVMPFGPTLPTPPLTL QP  CSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]
BLAST of ClCG01G000070 vs. TrEMBL
Match: M5X0J7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011423mg PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS A  KSPKHC NKQ L I K YKKLFL  S   + I  +ILL+WLILHP+KPEF +K+
Sbjct: 1   MSQALTKSPKHCGNKQGLSIGKLYKKLFLVFSTLSTTILSIILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQ 120
           AD+YQLNL   HLLNSS+QLTL SKNPN +VGIYYD L+VYA YKGQQIT+ TSLPPFYQ
Sbjct: 61  ADIYQLNLSGGHLLNSSVQLTLLSKNPNQKVGIYYDELKVYAAYKGQQITVYTSLPPFYQ 120

Query: 121 GSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180
           G +++N+LTA L GT LPVAPSFGYEVGRDQ+AGR VLNLK +GRLRWKVG+WVSG YR 
Sbjct: 121 GHEDSNVLTASLVGTGLPVAPSFGYEVGRDQTAGRLVLNLKVIGRLRWKVGTWVSGKYRV 180

Query: 181 NVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           NVDC+AVM FGP++PT PLT +Q T CSTT+
Sbjct: 181 NVDCLAVMAFGPSIPTGPLTSRQGTQCSTTV 211

[Close]
BLAST of ClCG01G000070 vs. TrEMBL
Match: A0A068U9K8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019878001 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.9e-78
Identity = 148/213 (69.48%), Postives = 169/213 (79.34%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRY--KKLFLGVSAFLSIISLLILLLWLILHPSKPEFRV 60
           MS  + KSPKHCANKQ L + K    KKLF   S FL  +S LI L+WL+LHPSKP+F +
Sbjct: 1   MSQIHAKSPKHCANKQGLAVDKLKFNKKLFYTFSTFLLSLSALIFLIWLVLHPSKPQFSL 60

Query: 61  KQADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPF 120
           K+AD+YQLNL   HLLNSSIQ TL S NPN +VGIYYD LQVYA YKGQQITL TSLPPF
Sbjct: 61  KEADIYQLNLSGPHLLNSSIQATLLSNNPNKKVGIYYDILQVYASYKGQQITLDTSLPPF 120

Query: 121 YQGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGY 180
           YQ  +E+NLL+A L G  LPVAPSFGYEVGRDQSAG  +LNLKA GRLRW+VG+WVSG Y
Sbjct: 121 YQAHEESNLLSASLVGNGLPVAPSFGYEVGRDQSAGNLLLNLKANGRLRWRVGTWVSGRY 180

Query: 181 RFNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           RFNV+C+A+MPFGP+LPT PL+ KQ T CS TL
Sbjct: 181 RFNVNCIAIMPFGPSLPTGPLSTKQGTQCSITL 213

[Close]
BLAST of ClCG01G000070 vs. TrEMBL
Match: F6H772_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00890 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.8e-76
Identity = 145/211 (68.72%), Postives = 171/211 (81.04%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS  + KSPKHCA+K  L I K YKKL+     FL  +  LILL+WLILHP+KPEF +K+
Sbjct: 1   MSKVDSKSPKHCADKG-LNIDKFYKKLYWSGFTFLFSVLSLILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQ 120
           AD+YQLNL   HLLNSSIQLTL SKNPN +VGIYYD +QVYA YKGQQIT+ TSLPPFYQ
Sbjct: 61  ADIYQLNLSGPHLLNSSIQLTLLSKNPNTKVGIYYDMVQVYASYKGQQITVDTSLPPFYQ 120

Query: 121 GSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180
           G +E+NLLTA L GT LPVAPSFGYEVGRDQ+AG+ VL+LK  GR+RWKVG+WVSG YR 
Sbjct: 121 GHEESNLLTASLVGTALPVAPSFGYEVGRDQTAGKLVLSLKLDGRVRWKVGTWVSGRYRL 180

Query: 181 NVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           NV+CVAVM FGP++P+ PL+ K+ T CSTT+
Sbjct: 181 NVNCVAVMAFGPSIPSGPLSSKEGTQCSTTV 210

[Close]
BLAST of ClCG01G000070 vs. TrEMBL
Match: B2KL74_VITVI (NDR1/HIN1-like protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.9e-75
Identity = 144/211 (68.25%), Postives = 170/211 (80.57%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS  + KSPKHCA+K  L I K YKKL+     FL  +  LILL+WLILHP+KPEF +K+
Sbjct: 1   MSKVDSKSPKHCADKG-LNIDKFYKKLYWSGFTFLFSVLSLILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQ 120
           AD+YQLNL   HLLNSSIQLTL SKNPN +VGIYYD +QVYA YKGQQIT+ TSLPPFYQ
Sbjct: 61  ADIYQLNLSGPHLLNSSIQLTLLSKNPNTKVGIYYDMVQVYASYKGQQITVDTSLPPFYQ 120

Query: 121 GSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180
           G +E+NLLTA L GT LPVAPSFGYEVGRDQ+AG+ VL+LK  GR+RWKVG+WVSG YR 
Sbjct: 121 GHEESNLLTASLVGTALPVAPSFGYEVGRDQTAGKLVLSLKLDGRVRWKVGTWVSGRYRL 180

Query: 181 NVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           NV+CVAV  FGP++P+ PL+ K+ T CSTT+
Sbjct: 181 NVNCVAVKAFGPSIPSGPLSSKEGTQCSTTV 210

[Close]
BLAST of ClCG01G000070 vs. TAIR10
Match: AT5G53730.1 (AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-71
Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS  ++ SPKHCA K  + I  R+KKLF   S F S + L+I L+WLILHP +PEF + +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNLI--DLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN +VGIYYD L VYA Y+GQQIT   SLPPF
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGY 180
           YQ  +E NLLTAFL GT LPVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           RFNV+C+A++ FG  + TPPL   Q T CSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]
BLAST of ClCG01G000070 vs. TAIR10
Match: AT3G11660.1 (AT3G11660.1 NDR1/HIN1-like 1)

HSP 1 Score: 164.9 bits (416), Expect = 5.6e-41
Identity = 82/184 (44.57%), Postives = 120/184 (65.22%), Query Frame = 1 

Query: 10  KHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLI 69
           K C N    + +K  +++F  +   L II L ILL+W IL PSKP F ++ A VY  N+ 
Sbjct: 2   KDCENHGHSR-RKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVS 61

Query: 70  DL--HLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANL 129
               +LL S+ Q+TLSS+NPN+++GIYYD L VYA Y+ QQIT PTS+PP YQG ++ ++
Sbjct: 62  GNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDI 121

Query: 130 LTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVAV 189
            + F+ GT++P+AP  G  +  D+  G  +L ++A GR+RWKVG++++G Y  +V C A 
Sbjct: 122 WSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAY 181

Query: 190 MPFG 192
           + FG
Sbjct: 182 INFG 184

[Close]
BLAST of ClCG01G000070 vs. TAIR10
Match: AT3G44220.1 (AT3G44220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 78/171 (45.61%), Postives = 113/171 (66.08%), Query Frame = 1 

Query: 16  QELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLN 75
           ++ K++KR   L LG   FL+ +  ++ L+W ILHP  P F ++ A +Y  N+   + L 
Sbjct: 12  EDEKMRKRIGALVLG---FLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLT 71

Query: 76  SSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGT 135
           S++Q+TLSS+NPN ++GI+YD L +YA Y+ QQ+TL T LP  YQG  +  + + FL GT
Sbjct: 72  SNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGT 131

Query: 136 TLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVA 187
           T+PVAP F   + +D +AG  +LN+K  G +RWKVG+WVSG YR +V+C A
Sbjct: 132 TVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPA 179

[Close]
BLAST of ClCG01G000070 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-37
Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1 

Query: 25  KKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLNSSIQLTLSS 84
           +KL   + AF+ I+ + I L+W+IL P+KP F ++ A VY  NL   +LL S+ Q+T++S
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 85  KNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPVAPSFG 144
           +NPN ++GIYYD L VYA Y  QQITL T++PP YQG +E N+ + F+ GT +P+AP   
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 145 YEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVAVMPFG 192
             +G ++  G   L ++A G +RWKV + ++G Y  +V C A +  G
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLG 183

[Close]
BLAST of ClCG01G000070 vs. TAIR10
Match: AT2G35960.1 (AT2G35960.1 NDR1/HIN1-like 12)

HSP 1 Score: 151.4 bits (381), Expect = 6.4e-37
Identity = 70/156 (44.87%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 31  VSAFLSIISLLILLLWLILHPSKPEFRVKQADVYQLNLIDLHLLNSSIQLTLSSKNPNHR 90
           +  F+ I+ + I L+W+IL P+KP F ++ A VY  NL   +LL S+ Q+T++S+N N R
Sbjct: 25  IIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSR 84

Query: 91  VGIYYDHLQVYAVYKGQQITLPTSLPPFYQGSQEANLLTAFLAGTTLPVAPSFGYEVGRD 150
           +GIYYD L VYA Y+ QQITL T++PP YQG +E N+ + F+ G ++P+AP     +G +
Sbjct: 85  IGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDE 144

Query: 151 QSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVDCVA 187
           Q+ G   L ++A GR+RWKVG+ ++G Y  +V C A
Sbjct: 145 QNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

[Close]
BLAST of ClCG01G000070 vs. NCBI nr
Match: gi|659074547|ref|XP_008437662.1| (PREDICTED: protein YLS9 [Cucumis melo])

HSP 1 Score: 394.8 bits (1013), Expect = 9.4e-107
Identity = 196/212 (92.45%), Postives = 204/212 (96.23%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MSLA+VKSPKHCANKQE+K+QKRYKKLFLGVSA LS ISLLILLLWLIL PSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLID-LHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLID LHLLNSSIQLTLSSKNPNHR+GIYYD+LQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG QEANLLTAFLAG+ +PVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           FNV+CVAVMPFGPTLPTPPLTL QPT CSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]
BLAST of ClCG01G000070 vs. NCBI nr
Match: gi|449456439|ref|XP_004145957.1| (PREDICTED: protein YLS9 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 2.1e-106
Identity = 195/212 (91.98%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MSLA+VKSPKHCANKQE+K+QKRYKKLFLGVSAFLS ISLLILLLWLIL PSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLID-LHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLID LHLLNSSIQLTLSSKNPNHR+GIYYD+LQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG QE NLLTAFLAG+ +PVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           FNV+CVAVMPFGPTLPTPPLTL QP  CSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]
BLAST of ClCG01G000070 vs. NCBI nr
Match: gi|645257927|ref|XP_008234641.1| (PREDICTED: protein YLS9 [Prunus mume])

HSP 1 Score: 308.5 bits (789), Expect = 8.8e-81
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS A  KSPKHC NKQ L I K YKKLFL  S   + I  +ILL+WLILHP+KPEF +K+
Sbjct: 1   MSQALTKSPKHCGNKQGLNIGKLYKKLFLVFSTLSTTILSIILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQ 120
           AD+YQLNL   HLLNSS+QLTL SKNPN +VGIYYD L+VYA YKGQQIT+ TSLPPFYQ
Sbjct: 61  ADIYQLNLSGSHLLNSSVQLTLLSKNPNQKVGIYYDELKVYAAYKGQQITVYTSLPPFYQ 120

Query: 121 GSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180
           G +++N+LTA L GT LPVAPSFGYEVGRDQ+AGR VLNLK +GRLRWKVG+WVSG YR 
Sbjct: 121 GHEDSNVLTASLVGTGLPVAPSFGYEVGRDQTAGRLVLNLKVIGRLRWKVGTWVSGKYRV 180

Query: 181 NVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           NVDC+AVM FGP++PT PLT +Q T CSTT+
Sbjct: 181 NVDCLAVMAFGPSIPTGPLTSRQGTQCSTTV 211

[Close]
BLAST of ClCG01G000070 vs. NCBI nr
Match: gi|596005944|ref|XP_007218403.1| (hypothetical protein PRUPE_ppa011423mg [Prunus persica])

HSP 1 Score: 307.8 bits (787), Expect = 1.5e-80
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRYKKLFLGVSAFLSIISLLILLLWLILHPSKPEFRVKQ 60
           MS A  KSPKHC NKQ L I K YKKLFL  S   + I  +ILL+WLILHP+KPEF +K+
Sbjct: 1   MSQALTKSPKHCGNKQGLSIGKLYKKLFLVFSTLSTTILSIILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPFYQ 120
           AD+YQLNL   HLLNSS+QLTL SKNPN +VGIYYD L+VYA YKGQQIT+ TSLPPFYQ
Sbjct: 61  ADIYQLNLSGGHLLNSSVQLTLLSKNPNQKVGIYYDELKVYAAYKGQQITVYTSLPPFYQ 120

Query: 121 GSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRF 180
           G +++N+LTA L GT LPVAPSFGYEVGRDQ+AGR VLNLK +GRLRWKVG+WVSG YR 
Sbjct: 121 GHEDSNVLTASLVGTGLPVAPSFGYEVGRDQTAGRLVLNLKVIGRLRWKVGTWVSGKYRV 180

Query: 181 NVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           NVDC+AVM FGP++PT PLT +Q T CSTT+
Sbjct: 181 NVDCLAVMAFGPSIPTGPLTSRQGTQCSTTV 211

[Close]
BLAST of ClCG01G000070 vs. NCBI nr
Match: gi|661891105|emb|CDP04987.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 298.9 bits (764), Expect = 7.0e-78
Identity = 148/213 (69.48%), Postives = 169/213 (79.34%), Query Frame = 1 

Query: 1   MSLANVKSPKHCANKQELKIQKRY--KKLFLGVSAFLSIISLLILLLWLILHPSKPEFRV 60
           MS  + KSPKHCANKQ L + K    KKLF   S FL  +S LI L+WL+LHPSKP+F +
Sbjct: 1   MSQIHAKSPKHCANKQGLAVDKLKFNKKLFYTFSTFLLSLSALIFLIWLVLHPSKPQFSL 60

Query: 61  KQADVYQLNLIDLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAVYKGQQITLPTSLPPF 120
           K+AD+YQLNL   HLLNSSIQ TL S NPN +VGIYYD LQVYA YKGQQITL TSLPPF
Sbjct: 61  KEADIYQLNLSGPHLLNSSIQATLLSNNPNKKVGIYYDILQVYASYKGQQITLDTSLPPF 120

Query: 121 YQGSQEANLLTAFLAGTTLPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGY 180
           YQ  +E+NLL+A L G  LPVAPSFGYEVGRDQSAG  +LNLKA GRLRW+VG+WVSG Y
Sbjct: 121 YQAHEESNLLSASLVGNGLPVAPSFGYEVGRDQSAGNLLLNLKANGRLRWRVGTWVSGRY 180

Query: 181 RFNVDCVAVMPFGPTLPTPPLTLKQPTSCSTTL 212
           RFNV+C+A+MPFGP+LPT PL+ KQ T CS TL
Sbjct: 181 RFNVNCIAIMPFGPSLPTGPLSTKQGTQCSITL 213

The following BLAST results are available for this feature:
BLAST of ClCG01G000070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH1.1e-3544.87NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH1.0e-1229.45Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH8.7e-1224.42NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
BLAST of ClCG01G000070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN27_CUCSA1.5e-10691.98NDR1/HIN1-like protein OS=Cucumis sativus GN=Csa_5G139020 PE=4 SV=1[more]
M5X0J7_PRUPE1.0e-8071.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011423mg PE=4 SV=1[more]
A0A068U9K8_COFCA4.9e-7869.48Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019878001 PE=4 SV=1[more]
F6H772_VITVI7.8e-7668.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00890 PE=4 SV=... [more]
B2KL74_VITVI3.9e-7568.25NDR1/HIN1-like protein OS=Vitis vinifera PE=2 SV=1[more]
BLAST of ClCG01G000070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53730.13.9e-7158.69 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G11660.15.6e-4144.57 NDR1/HIN1-like 1[more]
AT3G44220.11.6e-4045.61 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.12.2e-3743.11 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35960.16.4e-3744.87 NDR1/HIN1-like 12[more]
BLAST of ClCG01G000070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074547|ref|XP_008437662.1|9.4e-10792.45PREDICTED: protein YLS9 [Cucumis melo][more]
gi|449456439|ref|XP_004145957.1|2.1e-10691.98PREDICTED: protein YLS9 [Cucumis sativus][more]
gi|645257927|ref|XP_008234641.1|8.8e-8171.09PREDICTED: protein YLS9 [Prunus mume][more]
gi|596005944|ref|XP_007218403.1|1.5e-8071.09hypothetical protein PRUPE_ppa011423mg [Prunus persica][more]
gi|661891105|emb|CDP04987.1|7.0e-7869.48unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006952 defense response
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004871 signal transducer activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G000070.1ClCG01G000070.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 81..184
score: 3.
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 5..211
score: 1.1E
NoneNo IPR availablePANTHERPTHR31415:SF20SUBFAMILY NOT NAMEDcoord: 5..211
score: 1.1E