Carg13989 (gene) Silver-seed gourd

Overview
NameCarg13989
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNDR1/HIN1-like protein
LocationCucurbita_argyrosperma_scaffold_097 : 200823 .. 201458 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

mRNA sequence

ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

Coding sequence (CDS)

ATGTCTCGAGAAGACGTGAAATCCCCCAAACACTGCGCCATTAAGCAACAATTGAAGCTCGACAAGCACTACAAGAAGCTGTTCCTCGCAGCATCAGCAACCTTATCCACAATTTCGCTGCTCATCCTCCTCCTCTGGCTCATCCTCCGCCCATCCAAGCCAGAGTTCGCCCTGCGTCAGGCGGATGTCTACCAGCTCAACCTCATAGACCTTCACCTCCTCAACTCCTCCATTCAGCTCACCCTCTCATCCAAAAACCCAAATCAAAAAATGGGTATCTTCTACGACCAGCTCCAAGTATACGCCGCTTACAAAGGGCAACAGATAACCATGGGCACCTCCCTCCCAGGCTTCTACCAGGGCCAAGAAGAAAGCAATTTGTTGACGGCTTTCTTGGCCGGCAGCAGCGTGCCGGTGGCGCCGTCGTTTGGGTATGAAGTAGGGCGTGATCAAAGCGCTGGGCGGTTCGTGCTCAAAATCAAAGCCATGGGGCGGCTGCGATGGAAGCTGGGGAGCTGGGTTTCTGGGCGCTACCGATTTAATGTGGATTGTGTTGCGGTGATGCCTTTTGGGCCTACGCTCCCGACGGCTCCCCTCACTTTGAGCCAACCCACTCGCTGCTCCACAACGCTTTGA

Protein sequence

MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Homology
[Close]
BLAST of Carg13989 vs. NCBI nr
Match: XP_023533460.1 (NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.2 bits (1053), Expect = 4.2e-111
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDK YKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]
BLAST of Carg13989 vs. NCBI nr
Match: XP_022957698.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 5.5e-111
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEF LRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTL+QPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]
BLAST of Carg13989 vs. NCBI nr
Match: XP_022996419.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-110
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MSREDVKSPKHCA KQQLKLDK YKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           ADVYQLNLIDLHLLNSSIQLTLSSKNPN+KMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ
Sbjct: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF
Sbjct: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL
Sbjct: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]
BLAST of Carg13989 vs. NCBI nr
Match: XP_008437662.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 176/212 (83.02%), Postives = 191/212 (90.09%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E+NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QPTRCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]
BLAST of Carg13989 vs. NCBI nr
Match: XP_004145957.1 (PREDICTED: protein YLS9 [Cucumis sativus] >KGN49822.1 NDR1/HIN1-like protein [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]
BLAST of Carg13989 vs. TAIR10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 247.3 bits (630), Expect = 8.5e-66
Identity = 120/213 (56.34%), Postives = 158/213 (74.18%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+  + SPKHCA K  + ++  +KKLF   S   S + L+I L+WLIL P +PEF+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNLI--DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN+K+GI+YD+L VYAAY+GQQIT   SLP F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRY 180
           YQ  EE NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           RFNV+C+A++ FG  + T PL   Q TRCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]
BLAST of Carg13989 vs. TAIR10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 155.6 bits (392), Expect = 3.4e-38
Identity = 73/166 (43.98%), Postives = 110/166 (66.27%), Query Frame = 0 

Query: 21  DKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQL 80
           +K  K++       L+ +  ++ L+W IL P  P F L+ A +Y  N+   + L S++Q+
Sbjct: 14  EKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNLQV 73

Query: 81  TLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVA 140
           TLSS+NPN K+GIFYD+L +YA+Y+ QQ+T+ T LP  YQG  +  + + FL G++VPVA
Sbjct: 74  TLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVA 133

Query: 141 PSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVA 187
           P F   + +D +AG  +L IK  G +RWK+G+WVSGRYR +V+C A
Sbjct: 134 PYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPA 179

[Close]
BLAST of Carg13989 vs. TAIR10
Match: AT3G11660.1 (NDR1/HIN1-like 1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36
Identity = 75/172 (43.60%), Postives = 113/172 (65.70%), Query Frame = 0 

Query: 22  KHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLI--DLHLLNSSIQ 81
           K  +++F +    L       LL+W IL+PSKP F L+ A VY  N+     +LL S+ Q
Sbjct: 13  KLIRRIFWSIIFVLXXXXXXXLLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 82  LTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV 141
           +TLSS+NPN K+GI+YD+L VYA Y+ QQIT  TS+P  YQG ++ ++ + F+ G+SVP+
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 142 APSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
           AP  G  +  D+  G  +L I+A GR+RWK+G++++G+Y  +V C A + FG
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFG 184

[Close]
BLAST of Carg13989 vs. TAIR10
Match: AT2G35960.1 (NDR1/HIN1-like 12)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 67/145 (46.21%), Postives = 103/145 (71.03%), Query Frame = 0 

Query: 42  ILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVY 101
           I L+W+IL+P+KP F L+ A VY  NL   +LL S+ Q+T++S+N N ++GI+YD+L VY
Sbjct: 36  IFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVY 95

Query: 102 AAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIK 161
           A Y+ QQIT+ T++P  YQG +E N+ + F+ G+SVP+AP     +G +Q+ G   L I+
Sbjct: 96  ATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIR 155

Query: 162 AMGRLRWKLGSWVSGRYRFNVDCVA 187
           A GR+RWK+G+ ++G+Y  +V C A
Sbjct: 156 ADGRVRWKVGTLITGKYHLHVRCQA 180

[Close]
BLAST of Carg13989 vs. TAIR10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-35
Identity = 71/167 (42.51%), Postives = 109/167 (65.27%), Query Frame = 0 

Query: 25  KKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSS 84
           +KL  A  A +    + I L+W+ILRP+KP F L+ A VY  NL   +LL S+ Q+T++S
Sbjct: 17  RKLCAAIIAFIVXXLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 85  KNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFG 144
           +NPN K+GI+YD+L VYA Y  QQIT+ T++P  YQG +E N+ + F+ G++VP+AP   
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 145 YEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
             +G ++  G   L I+A G +RWK+ + ++G+Y  +V C A +  G
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLG 183

[Close]
BLAST of Carg13989 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-64
Identity = 120/213 (56.34%), Postives = 158/213 (74.18%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+  + SPKHCA K  + ++  +KKLF   S   S + L+I L+WLIL P +PEF+L +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNLI--DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN+K+GI+YD+L VYAAY+GQQIT   SLP F
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRY 180
           YQ  EE NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           RFNV+C+A++ FG  + T PL   Q TRCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]
BLAST of Carg13989 vs. Swiss-Prot
Match: sp|Q9SRN0|NHL1_ARATH (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.7e-35
Identity = 75/172 (43.60%), Postives = 113/172 (65.70%), Query Frame = 0 

Query: 22  KHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQADVYQLNLI--DLHLLNSSIQ 81
           K  +++F +    L       LL+W IL+PSKP F L+ A VY  N+     +LL S+ Q
Sbjct: 13  KLIRRIFWSIIFVLXXXXXXXLLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 82  LTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV 141
           +TLSS+NPN K+GI+YD+L VYA Y+ QQIT  TS+P  YQG ++ ++ + F+ G+SVP+
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 142 APSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAVMPFG 192
           AP  G  +  D+  G  +L I+A GR+RWK+G++++G+Y  +V C A + FG
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFG 184

[Close]
BLAST of Carg13989 vs. Swiss-Prot
Match: sp|Q9SJ54|NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 67/145 (46.21%), Postives = 103/145 (71.03%), Query Frame = 0 

Query: 42  ILLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVY 101
           I L+W+IL+P+KP F L+ A VY  NL   +LL S+ Q+T++S+N N ++GI+YD+L VY
Sbjct: 36  IFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVY 95

Query: 102 AAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIK 161
           A Y+ QQIT+ T++P  YQG +E N+ + F+ G+SVP+AP     +G +Q+ G   L I+
Sbjct: 96  ATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIR 155

Query: 162 AMGRLRWKLGSWVSGRYRFNVDCVA 187
           A GR+RWK+G+ ++G+Y  +V C A
Sbjct: 156 ADGRVRWKVGTLITGKYHLHVRCQA 180

[Close]
BLAST of Carg13989 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.8e-12
Identity = 42/166 (25.30%), Postives = 86/166 (51.81%), Query Frame = 0 

Query: 43  LLLWLILRPSKPEFALRQADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYA 102
           L++WLI RP+  +F +  A + +  L   + L  ++ L  + +NPN+++G++YD+++V  
Sbjct: 64  LIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123

Query: 103 AYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSS-VPVAPSFGYEVGRDQSAGRFVLKIK 162
            Y  Q+  M  ++  FYQG + + ++   L G   V +      ++  D ++  + +  K
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAK 183

Query: 163 AMGRLRWKLGSWVSGRYRFNVDCVAVMPFGPTLPTAPLTLSQPTRC 208
              ++R+K G   S R++  + C   +P   T  +    + QPT+C
Sbjct: 184 LRLKIRFKFGLIKSWRFKPKIKCDLKVPL--TSNSTSGFVFQPTKC 227

[Close]
BLAST of Carg13989 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 45/173 (26.01%), Postives = 94/173 (54.34%), Query Frame = 0 

Query: 38  ISLLILLLWLILRPSKPEFALRQADVYQLNLIDL-HLLNSSIQLTLSSKNPNQKMGIFYD 97
           + +  L+ WLI+RP   +F +  A + + +     ++L  ++ LT+  +NPN+++G++YD
Sbjct: 52  LGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYD 111

Query: 98  QLQVYAAYKGQQITMGTSLPGFYQGQEESNLLTAFLAGSSVPV-APSFGYEVGRDQSAGR 157
           +++ +A Y+G++ +  T  P FYQG + + +LT    G ++ +        +  ++ +G 
Sbjct: 112 RIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGV 171

Query: 158 FVLKIKAMGRLRWKLGSWVSGRYRFNVDCVAV-MPFGPTLPTAPLTLSQPTRC 208
           + ++IK   R+R+KLG     R +  VDC  + +P   +  T   +   P +C
Sbjct: 172 YNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKC 223

[Close]
BLAST of Carg13989 vs. TrEMBL
Match: tr|A0A1S3AUK3|A0A1S3AUK3_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92
Identity = 176/212 (83.02%), Postives = 191/212 (90.09%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E+NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QPTRCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]
BLAST of Carg13989 vs. TrEMBL
Match: tr|A0A0A0KN27|A0A0A0KN27_CUCSA (NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 8.4e-92
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS   VKSPKHCA KQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           FNV+CVAVMPFGPTLPT PLTL+QP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]
BLAST of Carg13989 vs. TrEMBL
Match: tr|A0A1Q3BZE4|A0A1Q3BZE4_CEPFO (LEA_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16747 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.3e-76
Identity = 143/211 (67.77%), Postives = 173/211 (81.99%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+   KSPKHC+ KQ L LDK YKKLF A S   +T+  L+ LLWLIL PSKP+F+L +
Sbjct: 1   MSQVLTKSPKHCSAKQGLILDKRYKKLFFALSTFFTTLLALVFLLWLILHPSKPQFSLEE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           AD+YQL+L   HLLNSS+QLTL SKNPN+K+GI+YDQ+QVYAAYKGQQIT+ TSLP +YQ
Sbjct: 61  ADIYQLSLSAPHLLNSSVQLTLLSKNPNKKVGIYYDQIQVYAAYKGQQITVDTSLPPYYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           G E++NLLTA L G+ +PVAPSFGY+VGRDQ+ G+ VL +K  GRLRWK+G+WVSG YRF
Sbjct: 121 GHEDTNLLTASLVGTGLPVAPSFGYQVGRDQAVGKLVLNLKVNGRLRWKIGTWVSGPYRF 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NV+CVAVM FGPTLPT PLT  Q T+CSTT+
Sbjct: 181 NVNCVAVMDFGPTLPTGPLTSKQGTQCSTTV 211

[Close]
BLAST of Carg13989 vs. TrEMBL
Match: tr|M5X0J7|M5X0J7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011423mg PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-76
Identity = 144/211 (68.25%), Postives = 175/211 (82.94%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+   KSPKHC  KQ L + K YKKLFL  S   +TI  +ILL+WLIL P+KPEF+L++
Sbjct: 1   MSQALTKSPKHCGNKQGLSIGKLYKKLFLVFSTLSTTILSIILLVWLILHPTKPEFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           AD+YQLNL   HLLNSS+QLTL SKNPNQK+GI+YD+L+VYAAYKGQQIT+ TSLP FYQ
Sbjct: 61  ADIYQLNLSGGHLLNSSVQLTLLSKNPNQKVGIYYDELKVYAAYKGQQITVYTSLPPFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           G E+SN+LTA L G+ +PVAPSFGYEVGRDQ+AGR VL +K +GRLRWK+G+WVSG+YR 
Sbjct: 121 GHEDSNVLTASLVGTGLPVAPSFGYEVGRDQTAGRLVLNLKVIGRLRWKVGTWVSGKYRV 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NVDC+AVM FGP++PT PLT  Q T+CSTT+
Sbjct: 181 NVDCLAVMAFGPSIPTGPLTSRQGTQCSTTV 211

[Close]
BLAST of Carg13989 vs. TrEMBL
Match: tr|W9R9V3|W9R9V3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003245 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.7e-74
Identity = 141/211 (66.82%), Postives = 177/211 (83.89%), Query Frame = 0 

Query: 1   MSREDVKSPKHCAIKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60
           MS+  +KSPKHC  KQ + ++K YKK+FLA SA  +TI  +ILL+WLILRP+KP+F+L++
Sbjct: 1   MSQLFIKSPKHCG-KQGVNIEKLYKKVFLAFSALFTTILSIILLVWLILRPTKPQFSLKE 60

Query: 61  ADVYQLNLIDLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFYQ 120
           AD+YQLNL + HLLNSSIQLTL SKNPNQK+GI+YD+LQVYAAYKGQQIT+ TSLP FYQ
Sbjct: 61  ADIYQLNLSNSHLLNSSIQLTLLSKNPNQKIGIYYDELQVYAAYKGQQITVYTSLPPFYQ 120

Query: 121 GQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYRF 180
           G E+SNLL+A L G+ +PVAPSFGY+V RDQ+ GR VL +K  GRLRWK+G+WVSGRYR 
Sbjct: 121 GHEDSNLLSASLGGTGLPVAPSFGYQVVRDQTVGRLVLNLKVNGRLRWKVGTWVSGRYRL 180

Query: 181 NVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 212
           NV+CVAV+ FGP +PT PL+  Q T+CST++
Sbjct: 181 NVNCVAVVAFGPAIPTGPLSSEQGTQCSTSV 210

The following BLAST results are available for this feature:
BLAST of Carg13989 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533460.14.2e-11199.05NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo][more]
XP_022957698.15.5e-11198.58NDR1/HIN1-like protein 26 [Cucurbita moschata][more]
XP_022996419.11.2e-11098.58NDR1/HIN1-like protein 26 [Cucurbita maxima][more]
XP_008437662.12.0e-9283.02PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo][more]
XP_004145957.11.3e-9182.55PREDICTED: protein YLS9 [Cucumis sativus] >KGN49822.1 NDR1/HIN1-like protein [Cu... [more]
BLAST of Carg13989 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53730.18.5e-6656.34Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G44220.13.4e-3843.98Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G11660.13.2e-3643.60NDR1/HIN1-like 1[more]
AT2G35960.11.6e-3546.21NDR1/HIN1-like 12[more]
AT3G52470.14.6e-3542.51Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
BLAST of Carg13989 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FI03|NHL26_ARATH1.5e-6456.34NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1[more]
sp|Q9SRN0|NHL1_ARATH5.7e-3543.60NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1[more]
sp|Q9SJ54|NHL12_ARATH2.8e-3446.21NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1[more]
sp|Q9FNH6|NHL3_ARATH8.8e-1225.30NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1[more]
sp|Q9SJ52|NHL10_ARATH1.5e-1126.01NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
BLAST of Carg13989 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUK3|A0A1S3AUK3_CUCME1.3e-9283.02NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1[more]
tr|A0A0A0KN27|A0A0A0KN27_CUCSA8.4e-9282.55NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1[more]
tr|A0A1Q3BZE4|A0A1Q3BZE4_CEPFO1.3e-7667.77LEA_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16... [more]
tr|M5X0J7|M5X0J7_PRUPE1.7e-7668.25Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011423mg PE=4 SV=1[more]
tr|W9R9V3|W9R9V3_9ROSA2.7e-7466.82Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003245 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13989-RACarg13989-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 81..184
e-value: 2.5E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR31415:SF20SUBFAMILY NOT NAMEDcoord: 4..211
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 4..211