ClCG00G000170 (gene) Watermelon (Charleston Gray)

NameClCG00G000170
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTranscription initiation factor TFIID subunit, putative
LocationCG_Chr00 : 196975 .. 203420 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATATTTTACTTGTCTCCCACTCCGGCGACCCCTTCCCCCATTTTCCTTTTCTATCTCTCTTCGGCGGCCGCCACAAACTACATCAGATCCTTTCTTCTGGTCATTTTCCCTTTTTCCAGAAACCCTAATCAGAGATATCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAGTACGTTCTTTTCCCTCTCTCATATATAGGTTTAAATTTTGTTTTTAATTGATTTTGCTGCTTCAAGATGAGCTAGATTAAAATACTTCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTCTTACTGAAGGGTGTCGGCAGTTGATTGAATGAGTAGACTGTGAACTAGTTCATTATTGAGTTTCTCCAATAGAATATTTAAAATTTACAAATTCCCAATGCCTCTGCCAAATATTTTGCTTTTGAACCTGGTCTAGCTTTTGGATGTTGCTTCCTGATCTTCTTCCAAATTACTAGGTGTTCCCATTAAGATTAGTGCAATAGCCTTTTATTGATTTTCTTCATCAAGAGATTCAAAAGGTTTGCTTCTAGGATTGGCTTATCCAATTTTCCCAATCCTTTTCTGTGAGAAGTCCCCAACCCCATTGGGACAGAAGAGCACAATTCTTATTAGCGAGATTGCTAATACCCAAGCCTCCCATTTCAGTGGGAAGAGAGGTAGTTTCCTAATTAATCATATTAGTGGCCCCAAACTCCTTACTACCTTTTCAAAAGAAGTTTCTAATAAGTTTATCTAGCCAATTGATCACACTGTTGGGACCAGAAAATACAAGAAATAGTAAAAAGGGATGCTAGTAAGAATAGACTTAGCCAAATTAATTCTACCCCCCTCTAGAGAGGAGAAGGTTCTTCCAGTACTCCAACCCTTTTTGGACTTCATCAATGACAGGTTGCAAAAAAGAGGAAGTCTTGGAGTTACCGCCAAGAGGCATGCCCAAGTACTCAAGAGGTTAGATGCTAGCCGCACAACTCCACTCCTGTGCCACTGGTGAAACCTTTGAGTTACAAATATTAAGACCAACCAAGAGAGTTTTATAGAGATAAACTCTGAAGTCCGACATCACCTCAGAACCTACAACAATTTTCTTCAAGTAATTGAACAAGGATAAGTTGTAGTTCAAAAAGAGAAGAGTGTCATCAGCAACTTGCAAATGAGAAATATGAACCTCTCCACCTCTGATTGGAGGCCCTTCAAGAAGTCATCCTTCATTCCTTTGTGGATAAGCCTGCCAAAAGACATACACCACCAACATGAAAAGGAGAGGGGCAAGCATATTGCCTTGCCTAAGCCCTCTAGTAGCTTTGATTTGGCCCCTCGGTCTCCCATTAATCATAATCGAGAAGGAGGTGTTAGTGATACAAGCTTTGATCCAACCAATCCAATGAGCACCGGAGCCTTTATGATTAAACACCTCAAGGAGAAAGTCCTAGCCAACCATATCCAAAGGCCCTCTCAAAAGCCAGCTTGAAAACCAACCCCTCTTCTTTCTATTAATATAATCATAAAAAATCTCCTTAGCAATCAAAATAGGATCAAGAATGTGCCTACCCATGATGAAGGTCGATTGACTGTGCCTGATGGGATGATGTTTAACTTTTTTTAAGCCTTCTGCCTAAGACTTTGGCAATAATCTTGTAGAGAATAGTGGTCAAACTAAGTGGCCTGAAATCAGGTGCTCCAGAGGTTTGAGCCTTTTTTTTTTTTTTTTGTTGTTGTTGTTGTAGTTGTTATGCCTGTAATTTTTGAGGTGAATATGATAGATCATTTTTATTTTGGTATATTTTTGAGTGCACTATGAACAAAACATTATGAAATAATCACTTAGCTTCAGAAAGAATCTTCTTATAACTTGTCTTAACATTTTGCCAGAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTATGAATCTTAAGATTTTCTCATTTCGAAAGACATTATAAATAGCTAGGAAGGATGGGGTGGGAATGCATTCTTCATTCCTGACCCGGGGGAGATTTTACTCTCTGTCTCCATCCCCCATTCTCTCAGGGTCTAAGGTGGTTTTGATGGATGGGCATAGGCTAGCTATTGGTTTGTTCGTTTGTTTGTTTTTTGCTTCAGATGTCAGCTCATCTTGTTTCAATTAACTTGTAAATTGTAGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGGTATGTAGAAACTTTTATGAAACCCAATTCCCTTGTTCATGTAGGACTCAAAAGATGCATTTCTTTTCCTCTGTTCAGTTACTTTAAATGTCAATGTGAAGCATAGACAAAAGAATTTGCATATTTCAACAAATCTGACTTATTTCAATACTTTATTTTGTTTCAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAACCACTCTGTTTAATTTATACTCTTTGCATTAGGAGTTTTTGGTATAAAATTTCAATACTAAAGCTTAGGTAAAACATCTCATATATATCACTGAAGTTTCTAACATATTTTTGTACGAATCGGCTTCTCATTTTACTACACAC

mRNA sequence

CGATATTTTACTTGTCTCCCACTCCGGCGACCCCTTCCCCCATTTTCCTTTTCTATCTCTCTTCGGCGGCCGCCACAAACTACATCAGATCCTTTCTTCTGGTCATTTTCCCTTTTTCCAGAAACCCTAATCAGAGATATCCCACAACAATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAACCACTCTGTTTAATTTATACTCTTTGCATTAGGAGTTTTTGGTATAAAATTTCAATACTAAAGCTTAGGTAAAACATCTCATATATATCACTGAAGTTTCTAACATATTTTTGTACGAATCGGCTTCTCATTTTACTACACAC

Coding sequence (CDS)

ATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACTAATGTTGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGATAAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGCTAA

Protein sequence

MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
BLAST of ClCG00G000170 vs. Swiss-Prot
Match: TAF11_ARATH (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana GN=TAF11 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.3e-62
Identity = 129/221 (58.37%), Postives = 154/221 (69.68%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEE-QEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVAT 60
           MK SKDPFEAA EE QEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                    S+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

BLAST of ClCG00G000170 vs. Swiss-Prot
Match: TA11B_ARATH (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana GN=TAF11B PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.9e-41
Identity = 94/171 (54.97%), Postives = 114/171 (66.67%), Query Frame = 1

Query: 51  DPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPD 110
           DP  AA+     +P  T         +  A  K K     E +   EVE  K  +  DP 
Sbjct: 37  DPFEAAMEEQEESPVETEQTL---EGDERAVKKCKTSVVAEAKNKDEVEFTKNITGADPV 96

Query: 111 KMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAK 170
             A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAK
Sbjct: 97  TRANKMQKILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAK 156

Query: 171 MFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           MFVG+LVETARVVM ER +SGPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 157 MFVGDLVETARVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204


HSP 2 Score: 38.1 bits (87), Expect = 1.5e-01
Identity = 17/19 (89.47%), Postives = 15/19 (78.95%), Query Frame = 1

Query: 1  MKQSKDPFEAAFEEQEESP 20
          MK SKDPFEAA EEQEESP
Sbjct: 32 MKHSKDPFEAAMEEQEESP 50

BLAST of ClCG00G000170 vs. Swiss-Prot
Match: TAF11_RAT (Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus GN=Taf11 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-25
Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 1

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTA 68
           E    E+  + P +P +AD   +P     V         GD D K AA           +
Sbjct: 14  EPGESEETRATPGAPVSADTEGIPEETDQV---------GDADSKEAAAEESELKSQDVS 73

Query: 69  SMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTE 128
            +  +   + S    AA K K D ++++E+  +V         D D++ KMQ ++S F+E
Sbjct: 74  DVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKV---------DEDEIQKMQILVSSFSE 133

Query: 129 EQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMT 188
           EQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  
Sbjct: 134 EQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCE 193

Query: 189 ERNDSGPIRPCHLREAYRRLKLEGKIP 212
           +  +  P++P H+REA RRLK +G+IP
Sbjct: 194 KWGEMPPLQPKHMREAVRRLKSKGQIP 201

BLAST of ClCG00G000170 vs. Swiss-Prot
Match: TAF11_MOUSE (Transcription initiation factor TFIID subunit 11 OS=Mus musculus GN=Taf11 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-25
Identity = 75/207 (36.23%), Postives = 113/207 (54.59%), Query Frame = 1

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTA 68
           E    E+  + P +  AAD   +P             +DGD D K AA           +
Sbjct: 14  EPGESEETRATPGALVAADTEGIPEETD---------RDGDADLKEAAAEESELKSQDVS 73

Query: 69  SMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTE 128
            +  +   N S    AA K K D ++++E+  +V         D D++ KMQ ++S F+E
Sbjct: 74  DVTAAERENSSLLTPAAKKLKLDIKDKKEKKQKV---------DEDEIQKMQILVSSFSE 133

Query: 129 EQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMT 188
           EQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  
Sbjct: 134 EQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCE 193

Query: 189 ERNDSGPIRPCHLREAYRRLKLEGKIP 212
           +  ++ P++P H+REA RRLK +G+IP
Sbjct: 194 KWGETPPLQPKHMREAVRRLKSKGQIP 201

BLAST of ClCG00G000170 vs. Swiss-Prot
Match: TAF11_HUMAN (Transcription initiation factor TFIID subunit 11 OS=Homo sapiens GN=TAF11 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 79/208 (37.98%), Postives = 114/208 (54.81%), Query Frame = 1

Query: 9   EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAA-----VATHSAT 68
           E    ++  + P  P A D     T+  P   D     D D D K AA     + +   +
Sbjct: 14  ETGESDETAAVPGDPGATD-----TDGIPEETDG----DADVDLKEAAAEEGELESQDVS 73

Query: 69  PATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFT 128
             TT     SS  N  AA K K D +E++E+  +V         D D++ KMQ ++S F+
Sbjct: 74  DLTTVEREDSSLLN-PAAKKLKIDTKEKKEKKQKV---------DEDEIQKMQILVSSFS 133

Query: 129 EEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVM 188
           EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V 
Sbjct: 134 EEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVC 193

Query: 189 TERNDSGPIRPCHLREAYRRLKLEGKIP 212
            +  +  P++P H+REA RRLK +G+IP
Sbjct: 194 EKWGEMPPLQPKHMREAVRRLKSKGQIP 201

BLAST of ClCG00G000170 vs. TrEMBL
Match: A0A0A0L5S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038160 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.2e-112
Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

BLAST of ClCG00G000170 vs. TrEMBL
Match: A0A068U7F4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017413001 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.9e-75
Identity = 150/220 (68.18%), Postives = 173/220 (78.64%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFE AFEEQEESPP SP AAD+ E  T     PA A     GDD       +  
Sbjct: 1   MKQSKDPFEVAFEEQEESPPESPIAADENETQT-----PAAAAASGQGDD----VGTSVP 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
            + P+TT    +S  +      K+KE+DEEE+EEN+E+EL KFP SGDPDKMAKMQ ILS
Sbjct: 61  PSLPSTTTGAAISIGA-AGPIVKSKEEDEEEDEENMEIELGKFPPSGDPDKMAKMQTILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFT+EQM+RYESFRR+GFQKANMKRLL SI+G+ KIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTDEQMNRYESFRRSGFQKANMKRLLTSITGSSKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           +VMTER + GPIRPCH+REA+RRLKLEGK+PR+SVPRLFR
Sbjct: 181 IVMTERKERGPIRPCHIREAFRRLKLEGKVPRRSVPRLFR 210

BLAST of ClCG00G000170 vs. TrEMBL
Match: A0A124SDJ1_CYNCS (Histone-fold OS=Cynara cardunculus var. scolymus GN=Ccrd_000810 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 147/222 (66.22%), Postives = 176/222 (79.28%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFE AFEE +ESPP+SP+  D++E  T +A  P+      D +          H
Sbjct: 1   MKQSKDPFEVAFEELDESPPDSPNPHDEIETQT-LAAKPSKNSQRYDVE----------H 60

Query: 61  SATPATTASMFVSSSSNVSAAP--KTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAI 120
           S +P+      V  SS  +A P  K KEDD+EEEEEN++VEL KF S+GDPDKMAKMQ+I
Sbjct: 61  STSPSNQPKARVRFSSTSAAIPTNKNKEDDDEEEEENMDVELGKFASTGDPDKMAKMQSI 120

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVET 180
           LSQFTEEQMSRYESFRR+GFQK+NMKRLL SI+G+ KIS+PMTIVVSGIAK+FVGELVET
Sbjct: 121 LSQFTEEQMSRYESFRRSGFQKSNMKRLLGSITGSSKISMPMTIVVSGIAKIFVGELVET 180

Query: 181 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           A++VMTER +SGPIRPCH+REAYRRLKLEGKIP++SVPRLF+
Sbjct: 181 AKMVMTERKESGPIRPCHVREAYRRLKLEGKIPKRSVPRLFQ 211

BLAST of ClCG00G000170 vs. TrEMBL
Match: M5WV04_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010895mg PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 147/233 (63.09%), Postives = 175/233 (75.11%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAAD-------------DLEVPTNVAPVPADAFDLQD 60
           M QSKDPFEAAFEEQE+SPP+SP+A D              L +P       + A  L  
Sbjct: 1   MDQSKDPFEAAFEEQEDSPPDSPAAPDAARTAPDTQEDDDPLLLPPGSKDPSSSATPLAA 60

Query: 61  GDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSG 120
               P + AV T   TPA T +    S+S  +     K+DD++E+EEN++VEL KF ++G
Sbjct: 61  PPPPPPTTAVTTARTTPAATTA--APSTSARAVVKHNKDDDDDEDEENMDVELGKFSATG 120

Query: 121 DPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGI 180
           DPDKMAKMQAILS+F+EEQMSRYESFRRAGFQK+NMKRLL SISGT KIS+PMTIVVSGI
Sbjct: 121 DPDKMAKMQAILSRFSEEQMSRYESFRRAGFQKSNMKRLLGSISGTPKISMPMTIVVSGI 180

Query: 181 AKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           AKMFVGELVETAR+VMTER +SGPIRPCH+REAYRRLKLEGK+P++S+ RLFR
Sbjct: 181 AKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSMSRLFR 231

BLAST of ClCG00G000170 vs. TrEMBL
Match: A0A0K9QVJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141620 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.9e-71
Identity = 139/219 (63.47%), Postives = 175/219 (79.91%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQS+DPFEAAF EQEESPP SPSAA+D+E   + A         ++G  D     +  H
Sbjct: 1   MKQSQDPFEAAFVEQEESPPESPSAANDMEAQLDEAFANDANQPEEEGGMD-----IVVH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
              P+T+A+    +S+ ++      +++EEE+E+++EVEL K PS+GDPDKMAKMQ ILS
Sbjct: 61  PNVPSTSAAP--PASARINQPSNKSKEEEEEDEDDMEVELGKLPSTGDPDKMAKMQTILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTE+QMSRYESFRR+GFQK+NMKRLL SI+G+QK+SIPMTIVVSGIAKMFVGELVETA+
Sbjct: 121 QFTEQQMSRYESFRRSGFQKSNMKRLLVSITGSQKVSIPMTIVVSGIAKMFVGELVETAK 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLF 220
           +VM ER DSGPIRPCH+RE+YRRLK+EGK+P++SVPRLF
Sbjct: 181 IVMAERKDSGPIRPCHIRESYRRLKVEGKVPKRSVPRLF 212

BLAST of ClCG00G000170 vs. TAIR10
Match: AT4G20280.1 (AT4G20280.1 TBP-associated factor 11)

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-63
Identity = 129/221 (58.37%), Postives = 154/221 (69.68%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEE-QEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVAT 60
           MK SKDPFEAA EE QEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                    S+ V+ + N     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

BLAST of ClCG00G000170 vs. TAIR10
Match: AT1G20000.1 (AT1G20000.1 TBP-associated factor 11B)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42
Identity = 94/171 (54.97%), Postives = 114/171 (66.67%), Query Frame = 1

Query: 51  DPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPD 110
           DP  AA+     +P  T         +  A  K K     E +   EVE  K  +  DP 
Sbjct: 37  DPFEAAMEEQEESPVETEQTL---EGDERAVKKCKTSVVAEAKNKDEVEFTKNITGADPV 96

Query: 111 KMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAK 170
             A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAK
Sbjct: 97  TRANKMQKILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAK 156

Query: 171 MFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           MFVG+LVETARVVM ER +SGPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 157 MFVGDLVETARVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204


HSP 2 Score: 38.1 bits (87), Expect = 8.2e-03
Identity = 17/19 (89.47%), Postives = 15/19 (78.95%), Query Frame = 1

Query: 1  MKQSKDPFEAAFEEQEESP 20
          MK SKDPFEAA EEQEESP
Sbjct: 32 MKHSKDPFEAAMEEQEESP 50

BLAST of ClCG00G000170 vs. NCBI nr
Match: gi|659096147|ref|XP_008448946.1| (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.1e-113
Identity = 210/220 (95.45%), Postives = 215/220 (97.73%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

BLAST of ClCG00G000170 vs. NCBI nr
Match: gi|449460461|ref|XP_004147964.1| (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 4.5e-112
Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

BLAST of ClCG00G000170 vs. NCBI nr
Match: gi|1009106052|ref|XP_015867595.1| (PREDICTED: transcription initiation factor TFIID subunit 11 [Ziziphus jujuba])

HSP 1 Score: 305.1 bits (780), Expect = 1.0e-79
Identity = 164/228 (71.93%), Postives = 188/228 (82.46%), Query Frame = 1

Query: 2   KQSKDPFEAAFEEQEESPPNSPSAA---DDLEVPTNVAPVPADAFDLQDGDD------DP 61
           +QSKDPFEAAFEEQE+SPP SP+AA   +D++   + A V     D Q+ DD      D 
Sbjct: 3   QQSKDPFEAAFEEQEDSPPESPAAAGVAEDIQTLQHPA-VSNTVVDAQEDDDLLPLSRDH 62

Query: 62  KSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKM 121
            S+++AT SA P   +S   + SS    APK KEDD+EEEEEN+EVEL+KFPSSGDPDKM
Sbjct: 63  PSSSMATTSAAPMPVSSRTHAPSS--VPAPKNKEDDDEEEEENMEVELSKFPSSGDPDKM 122

Query: 122 AKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFV 181
           AKMQAILSQFTEEQMSRYESFRRAGFQK+NMKRLLASISGTQKIS+PMTIVVSGIAKMFV
Sbjct: 123 AKMQAILSQFTEEQMSRYESFRRAGFQKSNMKRLLASISGTQKISVPMTIVVSGIAKMFV 182

Query: 182 GELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           GELVETAR+VM ER +SGPIRPCH+REAYRRLKLEGK+P++SVPRLFR
Sbjct: 183 GELVETARMVMAERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 227

BLAST of ClCG00G000170 vs. NCBI nr
Match: gi|720015466|ref|XP_010260848.1| (PREDICTED: transcription initiation factor TFIID subunit 11 [Nelumbo nucifera])

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-76
Identity = 154/220 (70.00%), Postives = 181/220 (82.27%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFEAAFEE++ES P+SP A D+LE  T  A V A  FD  D  DDP    +   
Sbjct: 1   MKQSKDPFEAAFEEEQESLPDSPVAPDELETQTPAATVVA--FDAPD--DDP---GINIR 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           S  P+T+A+    + S  + A KTKE+++EEEEEN++VEL KFPSS DPDKMAKMQAILS
Sbjct: 61  SGQPSTSAA----AQSTATTAGKTKEEEDEEEEENMDVELGKFPSSADPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFTE+QMSRYESFRR+GFQKANMKRLLASI+G  KIS+PMTIVVSGIAKMFVGELVET R
Sbjct: 121 QFTEQQMSRYESFRRSGFQKANMKRLLASITGNPKISVPMTIVVSGIAKMFVGELVETGR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           ++MTER ++GPIRPCH+REAYRRLKLEGK+P++SVPRLFR
Sbjct: 181 MIMTERRETGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 209

BLAST of ClCG00G000170 vs. NCBI nr
Match: gi|661891888|emb|CDP04114.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 288.5 bits (737), Expect = 9.8e-75
Identity = 150/220 (68.18%), Postives = 173/220 (78.64%), Query Frame = 1

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATH 60
           MKQSKDPFE AFEEQEESPP SP AAD+ E  T     PA A     GDD       +  
Sbjct: 1   MKQSKDPFEVAFEEQEESPPESPIAADENETQT-----PAAAAASGQGDD----VGTSVP 60

Query: 61  SATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
            + P+TT    +S  +      K+KE+DEEE+EEN+E+EL KFP SGDPDKMAKMQ ILS
Sbjct: 61  PSLPSTTTGAAISIGA-AGPIVKSKEEDEEEDEENMEIELGKFPPSGDPDKMAKMQTILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETAR 180
           QFT+EQM+RYESFRR+GFQKANMKRLL SI+G+ KIS+PMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTDEQMNRYESFRRSGFQKANMKRLLTSITGSSKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           +VMTER + GPIRPCH+REA+RRLKLEGK+PR+SVPRLFR
Sbjct: 181 IVMTERKERGPIRPCHIREAFRRLKLEGKVPRRSVPRLFR 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TAF11_ARATH4.3e-6258.37Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana GN=TAF1... [more]
TA11B_ARATH1.9e-4154.97Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana GN=TAF... [more]
TAF11_RAT5.5e-2535.75Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus GN=Taf11 P... [more]
TAF11_MOUSE5.5e-2536.23Transcription initiation factor TFIID subunit 11 OS=Mus musculus GN=Taf11 PE=2 S... [more]
TAF11_HUMAN1.2e-2437.98Transcription initiation factor TFIID subunit 11 OS=Homo sapiens GN=TAF11 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A0A0L5S4_CUCSA3.2e-11294.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038160 PE=4 SV=1[more]
A0A068U7F4_COFCA6.9e-7568.18Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017413001 PE=4 SV=1[more]
A0A124SDJ1_CYNCS3.2e-7266.22Histone-fold OS=Cynara cardunculus var. scolymus GN=Ccrd_000810 PE=4 SV=1[more]
M5WV04_PRUPE1.2e-7163.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010895mg PE=4 SV=1[more]
A0A0K9QVJ4_SPIOL7.9e-7163.47Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G20280.12.4e-6358.37 TBP-associated factor 11[more]
AT1G20000.11.1e-4254.97 TBP-associated factor 11B[more]
Match NameE-valueIdentityDescription
gi|659096147|ref|XP_008448946.1|3.1e-11395.45PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo][more]
gi|449460461|ref|XP_004147964.1|4.5e-11294.55PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis sativus][more]
gi|1009106052|ref|XP_015867595.1|1.0e-7971.93PREDICTED: transcription initiation factor TFIID subunit 11 [Ziziphus jujuba][more]
gi|720015466|ref|XP_010260848.1|1.8e-7670.00PREDICTED: transcription initiation factor TFIID subunit 11 [Nelumbo nucifera][more]
gi|661891888|emb|CDP04114.1|9.8e-7568.18unnamed protein product [Coffea canephora][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006809TAFII28
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:1903506 regulation of nucleic acid-templated transcription
biological_process GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly
biological_process GO:0006413 translational initiation
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0008134 transcription factor binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG00G000170.1ClCG00G000170.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006809TAFII28-like proteinPANTHERPTHR13218FAMILY NOT NAMEDcoord: 4..220
score: 1.7
IPR006809TAFII28-like proteinPFAMPF04719TAFII28coord: 118..203
score: 1.1
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 122..210
score: 8.3
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 122..211
score: 5.8