Bhi11G000206 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000206
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	transcription initiation factor TFIID subunit 11
Location	chr11 : 5580954 .. 5583971 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAAACAATAAAGAAGAAGAAGAAGGATGATGGAATGTCTTATCAATTGCGAACCTCATGGTTCACACCAAGGAGCGGATCCTTTTTCTTTATTTATTTTAATTTAATTCTTCTTTTTAGTAGAAGGTGGTTTAAACCTATTCTTAAAAATTTAATCACTAAATTGGTAAATTTGAAAGATAAAAGGACCAATTTGAAATGTAGGGGCTAAGTTAGATTCTTTAAATGTATCTATTCCTTGAAACGAAGCAATCCACGAACTACATCTGTTTTTCTTGTTCCAGGAAACCTAATCAGAGATATTTCACAAGAATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAAGAGCAGGAGGAATCGCCTCCGAACTCTCCTTCTGCCGTCGACGACCTCGAAATTCCGACCAATGTAGCCCCTGCTACCGCCGACGCTTTTGATTTGCAAGACGCCGGCGACGATGATTCAAAATCCGCTGCTGTTGCCACACATTCCGCTGCTCCTGCATCCTCCACTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGATGATGACGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCGAGTGGTGATCCAGATAAGAATATGGCAAAGATGCAGTTATGTTCTCTTGGATCTCTCATATATTGGTTTATGTTTTATTTTTAATTGATTTTTCTGCTTCAAGATCAGCTAGGTCTCGTCGGCAATTAGATTTACTTGATGTTTAAAATGTTAGAAGCATTTAGCCCTTTGGTCAGGACATCATTAGTTGATGGACATGAGTTGACTGTGAACTAGTTCTTTATTTAGTTTATCCATTACAATTTCTTAAACTTTTGAAATTCACAAATTCTCCCAATGCCTCTGCCAAATATTTTGCTTTCGAACCCGTTTTAGCTATTGCATGCTGCTTCCTGCTCTACCAAATTACCAGGTGTTACCATTAAGAATACTGTAATGGCCTTATATTGATTTTATTCATCAAGAGATCCAAAAGGTTTGCTTCTAAGATTGGCTTATCCAATTTTCTCAACCATTTTCTCTGAGAAATTCCCAACCCCATTGGCCTAGAAGAGCACGATTCCTAATAGCGAGATTGCTAATACCCAAACCTCCCATTTCAGTCGAGAGAGAGGCAGTTTTCCAATTAATCATATTTGTGGCCCCAAACTCCTTACTACCTTTTCAAAAGAAGTTTTTAATAAGTTTATCTAGCCAATTGATCACATTGTTGGGACAAGCAAATATTGAGAAATAGTAAAGGGGGATGCTAGTAAGAATAGACATAGCCAATGTAATTCTACCCCCCTCTTGAGAGGAGCAGATTCTTCCAATGCTCCAACTTTTTTTTTTTCTTTTTTCGAATTTATCAATGACAGGTTGTAAAAAAGAGGAAGTCTTGGAGTTATCGCCAATAGGCATGCCCAAGTACTCAAAGAGGCCCAATGCTAGCCGCACAACCCCACTTTTGTGCCACTCTGAAACCTATGAGTTTCAAATATTAAGCCCAAGCCAACCAAGAGAGCTTTAGAGAGATTAACTCTTAAGCCTGACATCACCTCAAAACCCACAACAATGTTCTTCAAGTGATTGAACAAGGGTAAGTTGTAGTTCGAAAAGAGAAGAGTGTCATATGCAAATTGCAAATGAAAAATATGAACCTCTCCACCTCTAATGGGAAGGCCCTTCATGAAGTCACCCCTCACTCCTTTGTCAATAAGCCTGCCAAAGGCATCCACCATCAACATGAAAAGGAAAGGGGCAAGCGGGTCGCCTTGCCTAAGCCCTTCAGTAGCTTTGATTTGTCCCCCCCGGTCTCCCATTAATCATAATAGCGGAGGGGTTAGTGATACAAGCTTTGATCCAACCAATCCAACGAGCACTGAAGCCTTTATGATTAAGCACCTCAAGCAGATAGTCCTAGTCAACCATATCCAAAGGCCTTCTCAAAATCCAGTTTGAAAATGAACCCTTCTTTCTATTAATATAATCATCGAGGATCAAGAATTTGCCTACCCATGATGAAGGCCGATTGGCTGTGGGTATGATGTTAAACTTTCTTAAGCCTTGTGGATAAGATCTTGGCAATAAACTTGTAGAGTATAGTTTAGTGGTCAGAGTCGTCAGACTAAGTGGCCTAAGATCAGTCACTTTAGAGGTACAAGCTTCTTTTGTTGTGTCTGTAATTTATGAATACGCTAGATCATTTTTATTTTGGTACTTTTTGACTGAACTATGAATGAAACATTATGAAATCTTCACTCAGAAAGAATCCTCTTGTAACTTGGTCTTATCATTTCTCCAGAGCCATTCTCTCACAATTTACGGAAGAGCAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTAAGAATCTTAATAATTTCTCATTTTAAAAGACATTATAGACAGCAAGAAAGGGTGGGGGCGGGAATGCATTCTTCATTCTTGACCCTGGGGGAAATTTTAATCCGTCTCCATCCCCCATTTTCTCAAGGTCAAAGGTGGTTTTGTTTTATTTTGTTTTTTTTTTTTGAGCCTGAGATATCACTCATTTTGTTTCAATTCACTTGTAAATTGTAGCTGTTAGCAAGCATATCGGGGACGCAGAAAATTTCTGTACCAATGACAATCGTAGTGTCTGGTATAGCTAAGATGTTCGTTGGGGAACTCGTAGAAACAGGTATGTATAAACTTCAATAAAACCCAATTCCATTGTTCATGTAGGATTCAAAAGATGCATTTCTTTTTCCTCTGTTCAGTTGCTTTAAATGTCAATGTGAAACATAGACAAAAGAATTTGCATATTTAAAAAAATCTGACCTATTTCAATACTTTTTATTTTGTTTCAGCAAGAGTTGTTATGACAGAGCGGAATGATTCGGGACCTATCAGGCCATGTCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAG

mRNA sequence

ATGGACGAAACAATAAAGAAGAAGAAGAAGGATGATGGAATGTCTTATCAATTGCGAACCTCATGGAAACCTAATCAGAGATATTTCACAAGAATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAAGAGCAGGAGGAATCGCCTCCGAACTCTCCTTCTGCCGTCGACGACCTCGAAATTCCGACCAATGTAGCCCCTGCTACCGCCGACGCTTTTGATTTGCAAGACGCCGGCGACGATGATTCAAAATCCGCTGCTGTTGCCACACATTCCGCTGCTCCTGCATCCTCCACTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGATGATGACGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCGAGTGGTGATCCAGATAAGAATATGGCAAAGATGCAAGCCATTCTCTCACAATTTACGGAAGAGCAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATATCGGGGACGCAGAAAATTTCTGTACCAATGACAATCGTAGTGTCTGGTATAGCTAAGATGTTCGTTGGGGAACTCGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCGGGACCTATCAGGCCATGTCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAG

Coding sequence (CDS)

ATGGACGAAACAATAAAGAAGAAGAAGAAGGATGATGGAATGTCTTATCAATTGCGAACCTCATGGAAACCTAATCAGAGATATTTCACAAGAATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTCGAAGAGCAGGAGGAATCGCCTCCGAACTCTCCTTCTGCCGTCGACGACCTCGAAATTCCGACCAATGTAGCCCCTGCTACCGCCGACGCTTTTGATTTGCAAGACGCCGGCGACGATGATTCAAAATCCGCTGCTGTTGCCACACATTCCGCTGCTCCTGCATCCTCCACTTCTATGTTTGTTTCCTCTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGATGATGACGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCGAGTGGTGATCCAGATAAGAATATGGCAAAGATGCAAGCCATTCTCTCACAATTTACGGAAGAGCAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATATCGGGGACGCAGAAAATTTCTGTACCAATGACAATCGTAGTGTCTGGTATAGCTAAGATGTTCGTTGGGGAACTCGTAGAAACAGCAAGAGTTGTTATGACAGAGCGGAATGATTCGGGACCTATCAGGCCATGTCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAG

Protein sequence

MDETIKKKKKDDGMSYQLRTSWKPNQRYFTRMKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGDDDSKSAAVATHSAAPASSTSMFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKNMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLE

Homology

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BLAST of Bhi11G000206 vs. TAIR10
Match: AT4G20280.1 (TBP-associated factor 11)

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-38
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 132 LAKFPSSGDPDKNMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISV 191
           L K+P+S DP K MAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +
Sbjct: 90  LTKYPTSSDPAK-MAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGM 149

Query: 192 PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE+YRRLKLE
Sbjct: 150 PMIIVACGIAKMFVGELVETARVVMAERKESGPIRPCHIRESYRRLKLE 197

[Close]

BLAST of Bhi11G000206 vs. TAIR10
Match: AT1G20000.1 (TBP-associated factor 11B)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 95/212 (44.81%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 31  RMKQSKDPFEAAFEEQEESPPNSPSAV--DDLEIPTNVAPATADAFDLQDAGXXXXXXXX 90
           RMK SKDPFEAA EEQEESP  +   +  D+  +        A+A +             
Sbjct: 31  RMKHSKDPFEAAMEEQEESPVETEQTLEGDERAVKKCKTSVVAEAKNKD----------- 90

Query: 91  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKM 150
                                                   EVE  K  +  DP     KM
Sbjct: 91  ----------------------------------------EVEFTKNITGADPVTRANKM 150

Query: 151 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 210
           Q ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+L
Sbjct: 151 QKILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDL 191

Query: 211 VETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           VETARVVM ER +SGPIRPCH+RE+YRRLKL+
Sbjct: 211 VETARVVMRERKESGPIRPCHIRESYRRLKLQ 191

[Close]

BLAST of Bhi11G000206 vs. Swiss-Prot
Match: sp|Q9M565|TAF11_ARATH (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-37
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 132 LAKFPSSGDPDKNMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISV 191
           L K+P+S DP K MAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +
Sbjct: 90  LTKYPTSSDPAK-MAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGM 149

Query: 192 PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE+YRRLKLE
Sbjct: 150 PMIIVACGIAKMFVGELVETARVVMAERKESGPIRPCHIRESYRRLKLE 197

[Close]

BLAST of Bhi11G000206 vs. Swiss-Prot
Match: sp|F4HR03|TA11B_ARATH (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-34
Identity = 95/212 (44.81%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 31  RMKQSKDPFEAAFEEQEESPPNSPSAV--DDLEIPTNVAPATADAFDLQDAGXXXXXXXX 90
           RMK SKDPFEAA EEQEESP  +   +  D+  +        A+A +             
Sbjct: 31  RMKHSKDPFEAAMEEQEESPVETEQTLEGDERAVKKCKTSVVAEAKNKD----------- 90

Query: 91  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKM 150
                                                   EVE  K  +  DP     KM
Sbjct: 91  ----------------------------------------EVEFTKNITGADPVTRANKM 150

Query: 151 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 210
           Q ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+L
Sbjct: 151 QKILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDL 191

Query: 211 VETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           VETARVVM ER +SGPIRPCH+RE+YRRLKL+
Sbjct: 211 VETARVVMRERKESGPIRPCHIRESYRRLKLQ 191

[Close]

BLAST of Bhi11G000206 vs. Swiss-Prot
Match: sp|Q54XM9|TAF11_DICDI (Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum OX=44689 GN=taf11 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-17
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 147 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVG 206
           +M  ++  F+E+Q +R+E ++R+ FQ+AN+K+++ S+  +  ++    IV+ GIAK+FVG
Sbjct: 343 QMNTLIKHFSEDQQTRFEYYKRSSFQRANIKKVMQSVL-SAPVNQTSAIVMGGIAKVFVG 402

Query: 207 ELVETARVVMTERNDSGPIRPCHLREAYRRLK 239
           E+VE AR +M E  ++GPIRP H+REAYRRLK
Sbjct: 403 EIVELARSIMEEWRETGPIRPRHIREAYRRLK 433

[Close]

BLAST of Bhi11G000206 vs. Swiss-Prot
Match: sp|Q99JX1|TAF11_MOUSE (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.9e-17
Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 142 DKNMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIA 201
           +  + KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+
Sbjct: 100 EDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGIS 159

Query: 202 KMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLK 239
           K+FVGE+VE A  V  +  ++ P++P H+REA RRLK
Sbjct: 160 KVFVGEVVEEALDVCEKWGETPPLQPKHMREAVRRLK 195

[Close]

BLAST of Bhi11G000206 vs. Swiss-Prot
Match: sp|Q15544|TAF11_HUMAN (Transcription initiation factor TFIID subunit 11 OS=Homo sapiens OX=9606 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 147 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVG 206
           KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVG
Sbjct: 105 KMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVG 164

Query: 207 ELVETARVVMTERNDSGPIRPCHLREAYRRLK 239
           E+VE A  V  +  +  P++P H+REA RRLK
Sbjct: 165 EVVEEALDVCEKWGEMPPLQPKHMREAVRRLK 195

[Close]

BLAST of Bhi11G000206 vs. TrEMBL
Match: tr|A0A1S4DX73|A0A1S4DX73_CUCME (transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC103490961 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 183/209 (87.56%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP  ADAFDLQD G           
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQD-GDDDPKSASVAT 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK MAKMQAI
Sbjct: 61  HSVTPVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK-MAKMQAI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ARVVMTERNDSGPIRPCHLRE YRRLKLE
Sbjct: 181 ARVVMTERNDSGPIRPCHLREVYRRLKLE 207

[Close]

BLAST of Bhi11G000206 vs. TrEMBL
Match: tr|A0A0A0L5S4|A0A0A0L5S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 184/209 (88.04%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP+ ADAFDLQD G           
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQD-GDDDPKSASVAT 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VELAKFPSSGDPDK MAKMQAI
Sbjct: 61  HSVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELAKFPSSGDPDK-MAKMQAI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ARVVMTERND+GPIRPCHLREAYRRLKLE
Sbjct: 181 ARVVMTERNDTGPIRPCHLREAYRRLKLE 207

[Close]

BLAST of Bhi11G000206 vs. TrEMBL
Match: tr|A0A1U8Q6S6|A0A1U8Q6S6_NELNU (transcription initiation factor TFIID subunit 11 OS=Nelumbo nucifera OX=4432 GN=LOC104599814 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.8e-51
Identity = 152/209 (72.73%), Postives = 165/209 (78.95%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQSKDPFEAAFEE++ES P+SP A D+LE  T    AT  AFD  D             
Sbjct: 1   MKQSKDPFEAAFEEEQESLPDSPVAPDELE--TQTPAATVVAFDAPD----------DDP 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                     XXXXXXXXXXXXXXXXXXXXXXXXXX +VEL KFPSS DPDK MAKMQAI
Sbjct: 61  GINIRSGQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXDVELGKFPSSADPDK-MAKMQAI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTE+QMSRYESFRR+GFQKANMKRLLASI+G  KISVPMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEQQMSRYESFRRSGFQKANMKRLLASITGNPKISVPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
            R++MTER ++GPIRPCH+REAYRRLKLE
Sbjct: 181 GRMIMTERRETGPIRPCHIREAYRRLKLE 196

[Close]

BLAST of Bhi11G000206 vs. TrEMBL
Match: tr|A0A0K9QVJ4|A0A0K9QVJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_141620 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.5e-48
Identity = 130/209 (62.20%), Postives = 149/209 (71.29%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQS+DPFEAAF EQEESPP SPSA +D+E   + A A  DA   ++ G           
Sbjct: 1   MKQSQDPFEAAFVEQEESPPESPSAANDMEAQLDEAFAN-DANQPEEEG-------GMDI 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                                   XXXXXXXXXXXX    L K PS+GDPDK MAKMQ I
Sbjct: 61  VVHPNVPSTSAAPPASARINQPSNXXXXXXXXXXXXXXXXLGKLPSTGDPDK-MAKMQTI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTE+QMSRYESFRR+GFQK+NMKRLL SI+G+QK+S+PMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEQQMSRYESFRRSGFQKSNMKRLLVSITGSQKVSIPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           A++VM ER DSGPIRPCH+RE+YRRLK+E
Sbjct: 181 AKIVMAERKDSGPIRPCHIRESYRRLKVE 200

[Close]

BLAST of Bhi11G000206 vs. TrEMBL
Match: tr|A0A1U8IGW1|A0A1U8IGW1_GOSHI (transcription initiation factor TFIID subunit 11-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107896635 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 130/225 (57.78%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 25  NQRYFTRMKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPAT---------ADAFD 84
           +Q +  RMKQSKDPFEAA EEQEESPPNSP   D+L   T   P            D  D
Sbjct: 86  DQNHPKRMKQSKDPFEAALEEQEESPPNSPVGEDELNSQTPNEPQNQTNGGHNLLVDDDD 145

Query: 85  LQDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKF 144
             + G                                      XXXXXXXXX+EVEL+KF
Sbjct: 146 YDEIG--PNVKNSSHPSSTSTCKLHSTIVNANVATGATTKNKEXXXXXXXXXMEVELSKF 205

Query: 145 PSSGDPDKNMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTI 204
           PSS DP K MAKMQAILSQFTE+QMSRYESFRR+  Q++NM+RLL SI+G+QKIS+PMTI
Sbjct: 206 PSSADPTK-MAKMQAILSQFTEDQMSRYESFRRSALQRSNMRRLLVSITGSQKISLPMTI 265

Query: 205 VVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           VV GIAKMFVGELVE AR+VMTER +SGPIRPCH+REAYRRLK+E
Sbjct: 266 VVCGIAKMFVGELVEKARIVMTERKESGPIRPCHIREAYRRLKIE 307

[Close]

BLAST of Bhi11G000206 vs. NCBI nr
Match: XP_016900577.1 (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 183/209 (87.56%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP  ADAFDLQD G           
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQD-GDDDPKSASVAT 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK MAKMQAI
Sbjct: 61  HSVTPVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK-MAKMQAI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ARVVMTERNDSGPIRPCHLRE YRRLKLE
Sbjct: 181 ARVVMTERNDSGPIRPCHLREVYRRLKLE 207

[Close]

BLAST of Bhi11G000206 vs. NCBI nr
Match: XP_004147964.1 (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis sativus] >KGN55942.1 hypothetical protein Csa_3G038160 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 1.9e-67
Identity = 184/209 (88.04%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGXXXXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP+ ADAFDLQD G           
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQD-GDDDPKSASVAT 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQAI 151
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VELAKFPSSGDPDK MAKMQAI
Sbjct: 61  HSVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELAKFPSSGDPDK-MAKMQAI 120

Query: 152 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 211
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180

Query: 212 ARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ARVVMTERND+GPIRPCHLREAYRRLKLE
Sbjct: 181 ARVVMTERNDTGPIRPCHLREAYRRLKLE 207

[Close]

BLAST of Bhi11G000206 vs. NCBI nr
Match: XP_023005534.1 (transcription initiation factor TFIID subunit 11 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 9.7e-64
Identity = 199/212 (93.87%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNV-APATADAFDLQDA--GXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEI TNV A A ADA DL D    XXXXXXXX
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGXXXXXXXXXXX 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKM 151
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK MAKM
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK-MAKM 120

Query: 152 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 211
           QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL
Sbjct: 121 QAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGEL 180

Query: 212 VETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           VETARVVMTERNDSG IRPCHLREAYRRLKLE
Sbjct: 181 VETARVVMTERNDSGAIRPCHLREAYRRLKLE 211

[Close]

BLAST of Bhi11G000206 vs. NCBI nr
Match: XP_022940909.1 (transcription initiation factor TFIID subunit 11 [Cucurbita moschata])

HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63
Identity = 198/211 (93.84%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPAT-ADAFDLQDA-GXXXXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEI TNVA    ADA DL D   XXXXXXXXX
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDXXXXXXXXXX 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMAKMQ 151
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK MAKMQ
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK-MAKMQ 120

Query: 152 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 211
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 212 ETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ETARVVMTERNDSG IRPCHLREAYRRLKLE
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLE 210

[Close]

BLAST of Bhi11G000206 vs. NCBI nr
Match: XP_022152728.1 (transcription initiation factor TFIID subunit 11 [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 2.2e-60
Identity = 193/214 (90.19%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 32  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFD-----LQDAGXXXXXX 91
           MKQSKDPFEAAFEEQEESPPNSPSA D +EI TNV  A +DA D          XXXXXX
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADVVEIQTNV--AASDALDSHXXXXXXXXXXXXXX 60

Query: 92  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDKNMA 151
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK MA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVELAKFPSSGDPDK-MA 120

Query: 152 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVG 211
           KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVG
Sbjct: 121 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVG 180

Query: 212 ELVETARVVMTERNDSGPIRPCHLREAYRRLKLE 241
           ELVETARVVMTERND+GPIRPCHLREAYRRLKLE
Sbjct: 181 ELVETARVVMTERNDTGPIRPCHLREAYRRLKLE 211

The following BLAST results are available for this feature:

BLAST of Bhi11G000206 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20280.1	2.9e-38	72.48	TBP-associated factor 11	[more]
AT1G20000.1	1.8e-35	44.81	TBP-associated factor 11B	[more]

BLAST of Bhi11G000206 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M565\|TAF11_ARATH	5.3e-37	72.48	Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|F4HR03\|TA11B_ARATH	3.2e-34	44.81	Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q54XM9\|TAF11_DICDI	3.6e-17	46.74	Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum OX=...	[more]
sp\|Q99JX1\|TAF11_MOUSE	7.9e-17	48.45	Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf...	[more]
sp\|Q15544\|TAF11_HUMAN	1.8e-16	51.09	Transcription initiation factor TFIID subunit 11 OS=Homo sapiens OX=9606 GN=TAF1...	[more]

BLAST of Bhi11G000206 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DX73\|A0A1S4DX73_CUCME	1.1e-68	87.56	transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0L5S4\|A0A0A0L5S4_CUCSA	1.3e-67	88.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=4 SV=1	[more]
tr\|A0A1U8Q6S6\|A0A1U8Q6S6_NELNU	4.8e-51	72.73	transcription initiation factor TFIID subunit 11 OS=Nelumbo nucifera OX=4432 GN=...	[more]
tr\|A0A0K9QVJ4\|A0A0K9QVJ4_SPIOL	6.5e-48	62.20	Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_141620 PE=4 SV=1	[more]
tr\|A0A1U8IGW1\|A0A1U8IGW1_GOSHI	2.5e-47	57.78	transcription initiation factor TFIID subunit 11-like isoform X2 OS=Gossypium hi...	[more]

BLAST of Bhi11G000206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900577.1	1.7e-68	87.56	PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo]	[more]
XP_004147964.1	1.9e-67	88.04	PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis sativus] >K...	[more]
XP_023005534.1	9.7e-64	93.87	transcription initiation factor TFIID subunit 11 [Cucurbita maxima]	[more]
XP_022940909.1	1.7e-63	93.84	transcription initiation factor TFIID subunit 11 [Cucurbita moschata]	[more]
XP_022152728.1	2.2e-60	90.19	transcription initiation factor TFIID subunit 11 [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006367	transcription initiation from RNA polymerase II promoter

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR006809	TAFII28

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903508	positive regulation of nucleic acid-templated transcription
biological_process	GO:0051123	RNA polymerase II transcriptional preinitiation complex assembly
biological_process	GO:0006413	translational initiation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:1903506	regulation of nucleic acid-templated transcription
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0008134	transcription factor binding
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000206	Bhi11M000206	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006809	TAFII28-like protein	PFAM	PF04719	TAFII28	coord: 151..236 e-value: 6.8E-33 score: 112.6
IPR006809	TAFII28-like protein	PANTHER	PTHR13218	FAMILY NOT NAMED	coord: 32..240
IPR006809	TAFII28-like protein	CDD	cd08048	TAF11	coord: 155..238 e-value: 5.68127E-40 score: 133.846
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 155..240 e-value: 6.1E-33 score: 114.7
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 155..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..127
None	No IPR available	PANTHER	PTHR13218:SF14	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED	coord: 32..240

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000206	Csa3G038160	Cucumber (Chinese Long) v2	cuwgoB232
Bhi11G000206	MELO3C014011	Melon (DHL92) v3.5.1	mewgoB512
Bhi11G000206	ClCG00G000170	Watermelon (Charleston Gray)	wcgwgoB001
Bhi11G000206	ClCG10G003420	Watermelon (Charleston Gray)	wcgwgoB089
Bhi11G000206	CSPI03G03400	Wild cucumber (PI 183967)	cpiwgoB232
Bhi11G000206	Cucsa.320200	Cucumber (Gy14) v1	cgywgoB648
Bhi11G000206	CmaCh06G007300	Cucurbita maxima (Rimu)	cmawgoB0989
Bhi11G000206	CmoCh06G007540	Cucurbita moschata (Rifu)	cmowgoB0986
Bhi11G000206	Lsi07G013710	Bottle gourd (USVL1VR-Ls)	lsiwgoB538
Bhi11G000206	Cp4.1LG08g07800	Cucurbita pepo (Zucchini)	cpewgoB1085
Bhi11G000206	CsGy3G003360	Cucumber (Gy14) v2	cgybwgoB222
Bhi11G000206	MELO3C014011.2	Melon (DHL92) v3.6.1	medwgoB505
Bhi11G000206	Carg21632	Silver-seed gourd	carwgoB1010
Bhi11G000206	CsaV3_3G003450	Cucumber (Chinese Long) v3	cucwgoB236
Bhi11G000206	Cla001153	Watermelon (97103) v1	wgowmB033
Bhi11G000206	Cla97C10G187940	Watermelon (97103) v2	wgowmbB011

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None