Carg27781 (gene) Silver-seed gourd

Overview
NameCarg27781
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHeat-shock protein Hsp20
LocationCucurbita_argyrosperma_scaffold_363 : 228416 .. 229848 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTCCGTCCGTCCATCCATCCGTCCGTCCATCCATCCATCCATTGTTTCTCTTTCTCTCTCTCTCTCTCATTTCTCTCATTTTCCTGTTGCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA

mRNA sequence

ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA

Coding sequence (CDS)

ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA

Protein sequence

MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMATMIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG
Homology
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BLAST of Carg27781 vs. NCBI nr
Match: XP_023521223.1 (neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 789.3 bits (2037), Expect = 7.0e-225
Identity = 423/446 (94.84%), Postives = 433/446 (97.09%), Query Frame = 0 

Query: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
           MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60

Query: 61  VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
           +TINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61  ITINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120

Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
           SILKILMPKLEEGILGVGIQEVKE+EAG+ATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEQEAGKATFESQDSEAEAIPHTPTDLETPETGKETKL 180

Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
           IEDTHGNGE GGENAK+EAFSK+EYAAETTPEEIEKLKGNEMEDTDGGSNDYSESE+LET
Sbjct: 181 IEDTHGNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQLET 240

Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
           GATKATEYEGTKEN+NGQIKVPKVT  EGIEVAEGTSQETANHQKEKEGNA+EHNGDMAT
Sbjct: 241 GATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQKEKEGNAKEHNGDMAT 300

Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
           MIKKKPDVKTQ QASIDQEQENFKRNRHTR ELGKPETYRNT +LKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQSQASIDQEQENFKRNRHTRAELGKPETYRNTRELKEPEDIEIPYLQSPA 360

Query: 361 HEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSXXXXXXXXKQFKMRIPIIVAG 420
           HEHEEKEVDQKGKS QTKDETKEAREECNSPQKVTH   XXXXXXXX  FKMRIPIIVAG
Sbjct: 361 HEHEEKEVDQKGKSSQTKDETKEAREECNSPQKVTHXXXXXXXXXXXXXFKMRIPIIVAG 420

Query: 421 SALVATLVIAVFSLVKSKKREKNMRG 447
           SALVA+LVI VFSLVKSKKREKNMRG
Sbjct: 421 SALVASLVIVVFSLVKSKKREKNMRG 446

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BLAST of Carg27781 vs. NCBI nr
Match: XP_022926215.1 (neurofilament medium polypeptide-like [Cucurbita moschata])

HSP 1 Score: 670.6 bits (1729), Expect = 3.6e-189
Identity = 356/388 (91.75%), Postives = 366/388 (94.33%), Query Frame = 0 

Query: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
           MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60

Query: 61  VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
           +TINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61  ITINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120

Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
           SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL
Sbjct: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180

Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
           IEDTHGNGE GGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSE E+LET
Sbjct: 181 IEDTHGNGEFGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSECEQLET 240

Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMA 300
           GATKATEYEGTKEN+NGQIKVPKVT  EGIEVAEGTSQETANHQ+EK EG AEEHNGD+A
Sbjct: 241 GATKATEYEGTKENMNGQIKVPKVTSMEGIEVAEGTSQETANHQEEKGEGKAEEHNGDIA 300

Query: 301 TMIKKKPDVKTQPQASIDQ-----EQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIP 360
           TMIKKK DVKTQPQASIDQ     EQENFKRNRHTR ELGK ETYRNT +LKEPEDIEIP
Sbjct: 301 TMIKKKLDVKTQPQASIDQEAQTLEQENFKRNRHTRAELGKLETYRNTRELKEPEDIEIP 360

Query: 361 YLQSPAHEHEEKEVDQKGKSFQTKDETK 383
           YLQSPAHEHEEKE+  + K+ Q+   TK
Sbjct: 361 YLQSPAHEHEEKEISDEKKTTQSGHTTK 388

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BLAST of Carg27781 vs. NCBI nr
Match: XP_022981685.1 (uncharacterized protein LOC111480753 [Cucurbita maxima])

HSP 1 Score: 664.8 bits (1714), Expect = 2.0e-187
Identity = 344/367 (93.73%), Postives = 357/367 (97.28%), Query Frame = 0 

Query: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60
           MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV
Sbjct: 1   MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIV 60

Query: 61  VTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120
           +TINGSGT+IEISWGQPVQKMEITR TYKKETETRRFKKIFRIPDGVILDEIKATYNDEK
Sbjct: 61  ITINGSGTQIEISWGQPVQKMEITRLTYKKETETRRFKKIFRIPDGVILDEIKATYNDEK 120

Query: 121 SILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKL 180
           SILKILMPKL EGILGVGI+ VKE+EAG+ATFESQDSEAEAIPH PTDLETPETGK+TKL
Sbjct: 121 SILKILMPKLVEGILGVGIEGVKEQEAGDATFESQDSEAEAIPHAPTDLETPETGKKTKL 180

Query: 181 IEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLET 240
           +EDTHGNGE GGENAK+EAFSK+EYAAETTPEEIEKLKGNEMEDTDGGSNDYSESE+LET
Sbjct: 181 VEDTHGNGEFGGENAKQEAFSKIEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESEQLET 240

Query: 241 GATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300
           GATKATEYEGTKENINGQI+VPKVT  EGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT
Sbjct: 241 GATKATEYEGTKENINGQIQVPKVTSMEGIEVAEGTSQETANHQKEKEGNAEEHNGDMAT 300

Query: 301 MIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPA 360
           MIKKKPDVKTQPQASIDQEQENFK+NRHTR  LGKPETYRNT +LKEPEDIEIPYLQSPA
Sbjct: 301 MIKKKPDVKTQPQASIDQEQENFKQNRHTRAGLGKPETYRNTRELKEPEDIEIPYLQSPA 360

Query: 361 HEHEEKE 368
           HEHEEKE
Sbjct: 361 HEHEEKE 367

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BLAST of Carg27781 vs. NCBI nr
Match: XP_022143634.1 (uncharacterized protein LOC111013495 [Momordica charantia])

HSP 1 Score: 445.3 bits (1144), Expect = 2.5e-121
Identity = 276/466 (59.23%), Postives = 329/466 (70.60%), Query Frame = 0 

Query: 7   FELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGS 66
           FELKISP+      S FEL L + T +  F+S+ETNSMF+LTAKL GF+R+DI +TING+
Sbjct: 38  FELKISPS---SSFSNFELQLARGTPS-PFWSNETNSMFILTAKLTGFSREDIGITINGT 97

Query: 67  GTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKIL 126
           GTRIEI WGQPVQ+MEITRW YKKETETRRFKKIFRIPDGV+LDEIKATYNDE+SILKI+
Sbjct: 98  GTRIEIGWGQPVQRMEITRWMYKKETETRRFKKIFRIPDGVVLDEIKATYNDEESILKIV 157

Query: 127 MPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHG 186
           MPKL +GILGVGI+EVKE++ GE   ESQDSEAE IP      E  ETG+ETK +ED   
Sbjct: 158 MPKLVDGILGVGIEEVKEQDVGEDALESQDSEAEEIPEV---TEGFETGRETKFVEDA-A 217

Query: 187 NGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKAT 246
           NG   G NA  E   K EY AETT EE EKLKG+EME  DG SN YSESE+ E   T+  
Sbjct: 218 NGVFEGANATPEPSPKREYLAETTQEETEKLKGDEMEHIDGVSNHYSESEKSEKLTTEIA 277

Query: 247 EYEGTKEN---INGQIKVPKVTITEGIEVAEGTSQETANHQKEK-EGNAEEHNGDMATMI 306
           E     +N   ++ +I +PKV   +GIE+ EGTS+ TANHQKEK E N+E HNG +ATM 
Sbjct: 278 EAPKRWDNGGIVDSEIIIPKVRSVKGIELDEGTSKGTANHQKEKGEPNSEAHNGSIATMT 337

Query: 307 KKKPDVKTQPQASIDQE----------QENFKRNRHTRV--ELGKPETYRNTWKLK---- 366
            K+PD+K Q QA++D++          Q N K     ++  + G  ETYR+ W+ K    
Sbjct: 338 NKQPDIKIQSQAAVDRDTKVPDKPELSQPNGKIQAEHKIVEQQGNKETYRSAWESKEFET 397

Query: 367 --EPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQK----VTHQDSX 426
             EPE I  PYLQSP HEHEEK V+Q+GKSFQT+DE KEAREE  SPQ+          X
Sbjct: 398 NNEPEYIASPYLQSPEHEHEEKGVNQQGKSFQTQDEIKEAREESGSPQREXXXXXXXXXX 457

Query: 427 XXXXXXXKQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG 447
           XXX    KQFKMR PII+AGSAL+A+L I VF+ V+SKKREKNMRG
Sbjct: 458 XXXIQDSKQFKMRTPIIIAGSALLASLAIVVFNFVRSKKREKNMRG 495

[Close]
BLAST of Carg27781 vs. NCBI nr
Match: OVA15469.1 (Alpha crystallin/Hsp20 domain [Macleaya cordata])

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-31
Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI+ TRED   ++ +L +LK ++   FFS ET SMF+LTA L G+ R+ I + I+  GT
Sbjct: 7   LKITKTREDGNLTSSDLRILKDSAGPLFFSSETESMFILTAHLKGYRRERIKIEISEDGT 66

Query: 69  RIEISWGQPVQKMEITRWT-YKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
           +I +S  + +Q+M + RWT YKKE E +RFKK+FRIPDGV+LD+IKA +N+E +IL I M
Sbjct: 67  QIAVSGEKTIQEMVMVRWTMYKKEVEIKRFKKVFRIPDGVVLDKIKARFNEEDTILSIFM 126

Query: 129 PKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKE 178
           PKL++GI G+GI+EVKE E  E   + + SE +  P+   D+   ET  E
Sbjct: 127 PKLKKGIRGIGIEEVKE-EKQEVVDDGERSEIK--PNLADDVPERETNHE 173

[Close]
BLAST of Carg27781 vs. TAIR10
Match: AT1G76770.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 5.9e-24
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI+ T+ DD SS+ +  + + +  H   S ETNS+F L   L GF +D I + IN  G 
Sbjct: 7   LKITRTK-DDVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIEINKEGN 66

Query: 69  RIEISWGQPVQKMEITRWT-YKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
            I+IS  + V++M + +W  +KKETE + FKK+FRIPD VILD+IKA +N+E   L + M
Sbjct: 67  LIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDGTLTVTM 126

Query: 129 PKLEEGILGVGIQE 142
           PK  +GI G+ I+E
Sbjct: 127 PKKVKGITGLKIEE 139

[Close]
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A200QYB7|A0A200QYB7_9MAGN (Alpha crystallin/Hsp20 domain OS=Macleaya cordata OX=56857 GN=BVC80_9039g6 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31
Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI+ TRED   ++ +L +LK ++   FFS ET SMF+LTA L G+ R+ I + I+  GT
Sbjct: 7   LKITKTREDGNLTSSDLRILKDSAGPLFFSSETESMFILTAHLKGYRRERIKIEISEDGT 66

Query: 69  RIEISWGQPVQKMEITRWT-YKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
           +I +S  + +Q+M + RWT YKKE E +RFKK+FRIPDGV+LD+IKA +N+E +IL I M
Sbjct: 67  QIAVSGEKTIQEMVMVRWTMYKKEVEIKRFKKVFRIPDGVVLDKIKARFNEEDTILSIFM 126

Query: 129 PKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKE 178
           PKL++GI G+GI+EVKE E  E   + + SE +  P+   D+   ET  E
Sbjct: 127 PKLKKGIRGIGIEEVKE-EKQEVVDDGERSEIK--PNLADDVPERETNHE 173

[Close]
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A0A0K807|A0A0A0K807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 114/227 (50.22%), Postives = 138/227 (60.79%), Query Frame = 0 

Query: 211 PEEIEKLKGNEMEDTDGGSNDYSESERLETGATKATEYEGTKENINGQIKVPKVTITEGI 270
           P EIEKLKG+EM+      ++Y   ER +T                    VPK+  TEGI
Sbjct: 7   PHEIEKLKGSEMDQDINVESNYGYCERNQT--------------------VPKIRSTEGI 66

Query: 271 EVAEGTSQETANHQKEKEGNAEEHNGDMATMIKKKPDVKTQPQASIDQEQENFKRNRHTR 330
           EVAE TS+ TANH+KE + NAE  NGD ATMI KKP VKTQ QASID+E           
Sbjct: 67  EVAEVTSKGTANHKKETQLNAEARNGDKATMINKKPYVKTQAQASIDRE----------- 126

Query: 331 VELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNS 390
               + ET       KEPEDI  PY   P ++HE+KE D+KG+SFQTKDE K+AREE   
Sbjct: 127 ---AQLETD------KEPEDIGSPYFHRPVNQHEQKEADKKGRSFQTKDEIKDAREE--- 186

Query: 391 PQKVTHQDS----XXXXXXXXKQFKMRIPIIVAGSALVATLVIAVFS 434
             K+TH+DS    XXXXXXXX  FKMR  II+AGSAL+A++VI  F+
Sbjct: 187 -WKLTHEDSSXXXXXXXXXXXXXFKMRTLIIIAGSALLASVVIVAFN 189

[Close]
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2P5DSD8|A0A2P5DSD8_PARAD (Small heat shock protein HSP OS=Parasponia andersonii OX=3476 GN=PanWU01x14_036180 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.8e-26
Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI+ ++ DD +ST +L + K  S   F S ET+S F+LTA L GFAR+ I V I+  G 
Sbjct: 7   LKITQSK-DDVTSTTDLRIAKDPSGPVFMSRETDSKFILTAHLKGFARERIEVNISEDGR 66

Query: 69  RIEISWGQPVQKMEITRW-TYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
            I+IS  +PVQ+M ++ W  +KKE E + F K+FRIPDGVILD IKA +N+++S+L ILM
Sbjct: 67  EIDISGERPVQEMVMSGWMVHKKEVELKGFIKVFRIPDGVILDRIKAKFNEQESVLTILM 126

Query: 129 PKLEEGILGVGIQEVKEKE 147
           PK  +GI GV I+E+KE+E
Sbjct: 127 PKSAKGIRGVRIEELKEEE 144

[Close]
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2P4MF45|A0A2P4MF45_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_24194 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 9.9e-26
Identity = 82/185 (44.32%), Postives = 114/185 (61.62%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI+ TR  D +ST +  + K  +   F S E ++MF+LTA L GF R+ I + IN  GT
Sbjct: 7   LKITQTR-GDLTSTADFRIAKDRAGPVFLSRENDTMFILTAHLKGFKREKIYIKINEDGT 66

Query: 69  RIEISWGQPVQKMEITRW-TYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
           RI +S  +P Q+M +  W  YKK  E R F+K+F+IP+GV+LD+IKA +N+E+S L I M
Sbjct: 67  RIAVSGEKPAQEMVMIGWVVYKKREEIRGFRKVFKIPEGVVLDKIKAKFNEEESSLTIFM 126

Query: 129 PKLEEGILGVGIQEVKEKEA---GEATFESQDSEA-EAIPHTPTDLETPETGKETKL--I 187
           PKLE+G  GVGI+EV+E+E    G+   E +   A EA        +  E  KE K+  I
Sbjct: 127 PKLEKGTHGVGIEEVQEEEVERDGKGKLEMEQVVANEAFQKDSVGEKIQEEPKEPKIRSI 186

[Close]
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2K2BEM4|A0A2K2BEM4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G067700v3 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25
Identity = 137/474 (28.90%), Postives = 227/474 (47.89%), Query Frame = 0 

Query: 9   LKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGT 68
           LKI  TR DD SS  EL + K  +   FFS ET +MF L   L GF +++  + IN  G 
Sbjct: 7   LKIIRTR-DDISSFTELRIAKDHAGPLFFSRETENMFTLIGYLKGFRKENTDIKINEDGD 66

Query: 69  RIEISWGQPVQKMEITRW-TYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILM 128
           RI IS  +PVQ++ +  W  +KKE E R F+K FRIPDGV+LD+IKA ++DE+S L I++
Sbjct: 67  RISISGKKPVQEIVLIGWIMHKKEVELRSFRKAFRIPDGVVLDKIKARFDDEESTLTIIL 126

Query: 129 PKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHGN 188
           PKL +GIL V ++EVK +E  +   E+  + A+  P      E      E K +E +   
Sbjct: 127 PKLVKGILDVELEEVKGEEVDKGRGEATQAVADKAP------EGESREPELKRVEQS--- 186

Query: 189 GELGGENAKREAFSKMEYAAETTPEEI------EKLKGNEMEDTDGGSNDYSESERLETG 248
            +   +N KR    K + AAE  PE +      +KL+  +  + +  + + +E       
Sbjct: 187 -DQALQN-KRVVEQKAD-AAEIVPERVVDTTLQKKLEPKDQSELEEATPEKAEPXXXXXA 246

Query: 249 ATKATEYEGTKENINGQIKVPKVTITE-----------------------GIEVAEGTSQ 308
           AT    Y+ T       IK PK+ + E                       G++  +G  Q
Sbjct: 247 AT----YQET------VIKKPKLVLPEKEIEHQESKKAAPAEKTRSEELPGLK-EQGKKQ 306

Query: 309 ETANHQKEKEGNAEEH-NGDMATMI--------KKKPDVKTQPQASIDQ---EQENFKRN 368
           ET   +  +E   E+H +G     +         K P+V  QP A  DQ   E+ N    
Sbjct: 307 ETPEAKSTREETLEKHPHGPELNQLTEAVMDQETKPPEVSNQPSAQADQGHTEEAN---- 366

Query: 369 RHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEARE 428
                 + K E    + KL+  ++++ P +  P  + E+K  +    ++++++   +  +
Sbjct: 367 -----HVVKTEISHESEKLETEKNVQEPTIPEP--DQEKKLAETPHPAYKSRNNEAQGSK 426

Query: 429 ECNSPQKVTHQDSXXXXXXXXKQFKMRIPIIVAGSALVATLVIAVFSLVKSKKR 441
           E +       + +        ++ K+  P++VAGSA++ ++V+ V   +++KKR
Sbjct: 427 ESHGIGNDIKEAATNRKNPVSRRTKLCPPLVVAGSAILVSIVVFVIGWIRAKKR 445

The following BLAST results are available for this feature:
BLAST of Carg27781 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023521223.17.0e-22594.84neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087... [more]
XP_022926215.13.6e-18991.75neurofilament medium polypeptide-like [Cucurbita moschata][more]
XP_022981685.12.0e-18793.73uncharacterized protein LOC111480753 [Cucurbita maxima][more]
XP_022143634.12.5e-12159.23uncharacterized protein LOC111013495 [Momordica charantia][more]
OVA15469.12.4e-3148.82Alpha crystallin/Hsp20 domain [Macleaya cordata][more]
BLAST of Carg27781 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76770.15.9e-2445.52HSP20-like chaperones superfamily protein[more]
BLAST of Carg27781 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg27781 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A200QYB7|A0A200QYB7_9MAGN1.6e-3148.82Alpha crystallin/Hsp20 domain OS=Macleaya cordata OX=56857 GN=BVC80_9039g6 PE=3 ... [more]
tr|A0A0A0K807|A0A0A0K807_CUCSA1.3e-3050.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1[more]
tr|A0A2P5DSD8|A0A2P5DSD8_PARAD5.8e-2651.80Small heat shock protein HSP OS=Parasponia andersonii OX=3476 GN=PanWU01x14_0361... [more]
tr|A0A2P4MF45|A0A2P4MF45_QUESU9.9e-2644.32Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_24194 PE=3 SV=1[more]
tr|A0A2K2BEM4|A0A2K2BEM4_POPTR1.3e-2528.90Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G067700v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27781-RACarg27781-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 40..132
e-value: 1.2E-7
score: 31.7
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 27..145
score: 11.742
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 28..135
e-value: 3.2E-13
score: 51.4
IPR008978HSP20-like chaperoneSUPERFAMILYSSF49764HSP20-like chaperonescoord: 38..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..409
NoneNo IPR availablePANTHERPTHR43670FAMILY NOT NAMEDcoord: 276..441
NoneNo IPR availablePANTHERPTHR43670:SF9ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN-RELATEDcoord: 276..441
NoneNo IPR availablePANTHERPTHR43670:SF9ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN-RELATEDcoord: 12..249
NoneNo IPR availablePANTHERPTHR43670FAMILY NOT NAMEDcoord: 12..249
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 40..129
e-value: 1.5726E-12
score: 62.5716

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg27781Cla016397Watermelon (97103) v1carwmB0651
Carg27781Csa7G298830Cucumber (Chinese Long) v2carcuB0674
Carg27781ClCG09G010170Watermelon (Charleston Gray)carwcgB0634
Carg27781CSPI07G12570Wild cucumber (PI 183967)carcpiB0684
Carg27781CmaCh01G009720Cucurbita maxima (Rimu)carcmaB0923
Carg27781CmoCh01G010100Cucurbita moschata (Rifu)carcmoB0897
Carg27781Lsi02G019710Bottle gourd (USVL1VR-Ls)carlsiB594
Carg27781CsaV3_7G024560Cucumber (Chinese Long) v3carcucB0686
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None