Carg27640 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27640
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MADS box transcription factor
Location	Cucurbita_argyrosperma_scaffold_402 : 36780 .. 43271 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAGAGTGGTTTAAGGGCTTGTGAGTTTGAGAGGTTAAGAGTAGTAGAGATATTGCAGCGACCGGAAGCTAGTTCAAACTAGTGGAAGGTTGGGTGCAGAGCAGCTGCTGCAGAGTTCAAGAAATTGGTTGAAATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGCAAGCGCCGAGCTGGGCTCCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGGTATTGCTTTTTCTTATTATCTTGTTCTTCTTCCTTTTTCTTAGTTAAAAATGTGTTTAAAAGTTAGGTTTGGTCGAGAGTACAATATTTTGATCCGGTCTGTGGCCTAAACCCACCACTAGCAGATATTGTACTATTTGGGGTTTCCCGAGTTTTCGCTCAAGGTTTTTAAAACGCGTCTCTTATAGAGAAGTTTCCAGACGGTTACAAAGAATGTGTTCTCCTCCCCAACCGATGTGAGATCTCGCAATCTACCCTCCTTTGGAGTACAGCGTCCTCGCTAGCACTCGTTCTCTTCTCCAATCTATGTGAGACCCCTCCAATTCACCTCCTTTCGGGGCCTAGAGTCCTTGTTGGCACACCGCCTCGTCCAAACTCACTGCTAGCAGATATTGTCCTATTTAAATTTTCCTTTTCGGGTTTCCCCTTAAGGTTTTTAAAACATGTCTGCTAGAGAGAGGCTTCCACACCCTTATAAAGAATGCTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCATCCCTTTTCGAGGTCCATCGTTCTCGATTACACTCGTTTCCTTCTCTAATTGATGTGGGACCCCCGAATCTACCCCACTTCGGGACTTAGTGTCCTTGCTGGCACATCGCCTCATGTCTATCCCCCTTCGAGGCTTAGCCTCCTCGCTGCCACATCGTCCCCTGTTTGACTCTGATACTATTTGTAACAGTCCAAGCCCACTACAGGTATTGTCCTATTTGGATTTTCCCTTTCGGGTTTCCCTTTAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCATACCCTTATAAAAGCTACTCGTTCTCCTCTCTAATGGATGTGGGATCTCCCACTTCCTATATTTTGTTTTTTTAATATAATTCAGCTTATATTAGGATAGGTGTTCGAATTTCTAACCTTTTCTTCAAGAGCATAATACTTGGACCGAGTAAACCTCTATCTTTTTAGTAAGAGTGAATATAGGTTGGTTTGAAAGAATCTTTTAGGGTTTGTGTCCCTCAACCCAAAATTTTGTGCCGGTTGGGTTTGTGTCCTGAGCAACTCGAATAGAGCTCATAACCTAACTCAACGCACCTGGACTAGATTAGGTTGTCAAATTGTTCACTTATTTTAATTATTTAAAAAATCTACTTATTCACGGTAGATATTAAACTAAAATCTCATAAAATTCAAATATTAAATATTCCCAAGTCACAAAGCATCACTAACATTAATTTCAAACTTCAAATATTCTTAATTTTCATACCAATCTTAAAAGTAGGATATGATAGAGTTCGATTATAATTTTACTTTTGTTGGTCTGATTGTTCGTGACATAAAAAATGTTAACTCAGCTAACCAACCCGAATGTTTTCTATTTTCCCATTACTCAATTCAACTTAGATCAAAAAGAAATCTAACCCAACCCAACTTTAAACCAATTGATGAAGTTGCACATCATTAAACACTTCTAGTTTTAAATATTGGCTTGATCTCCCTTATTTAAATGTGGGAGGACAGAACCATGCAAGGGCTTATTGAAAGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCAATGGACAACCAAACCCTGGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAATTTGATGTGACAAAAGCTTAGTTTTTCTTTTTAAAGTTTTCATTTTTCATTTGTAAAAATAACATAATTTTTAAAACTTTAAATTTTATATTACAACAAAGTTTTTAATAATTAAAAAAAAAATCTACAACATAGTCTTTAGTTTAAATATTATCATTAGAGTATTAAAATTAACTAAACAACTAAACAATTCCGATTTTTTTCTCTCATTACGGGACGAAGATGAGGATAAGGAATATAATCTCGTCTCTAGCTCCATTTATGGGAAGAATGTTTTCCACTCCCTCCCCGTTATCCGTTTAAATGAGGAATCTCTTTCCCGTTCGGACGAATCTTTGTAGGGCAGGTTAAGGACAGGTCCCTATAAGTAAAATCGACATCTCGATTTATAATTTAATAATCGTGACCAAAATTTGAGACGAAACAAAGAACTTTTAGATACGTAATTTTATTTTATGAATGGAGAAGTGTGCTAAAAAGCACTAAACTAAAGAAATTATAAATAAAAAGCTGAAACTTTTTCTTTCTTTTAGATAAAGTTATCAAAAGGGATCCTTGATTATTTAATAAGTGACTTGGTTAATTAGGTCTCCATTATAGTTGTTAGGGTTAGAGTGTTAAGTCATGTATGATACAAAATAGAAGATGTTTCATTTTAATCATATAAACATTTTAAATAGAAAACACCCAACCTAGCTCTAAAGCATTCAAGTAGCTTCTAATTGAAAACTCTTTCCAAATTCAACCAAACAATACGAAAAGAGAGGTCTTGGAACCCGATCATGAGCCATGTGTGGCAACCAAAGGTGAACGTGCATAAGAAAGAATGTTGCATGAGAGAGATCGAGGGCTAATAAAGAGAGAGACGAACTGCATTTACGAAAACACGAGGAGAGCGATGCTATGCATGACAACCTAACATTAGAGGAGGGTTGAGCTGGGATAGATCAAGGGTATTGGGTGAAAGAGTCAATCGAGAGAGAATGGATGAAAGAGTGGAAGAGAGATTTTTCTCCATTAGTAAATGGGAACGAAAGACAGGATTATATTCTCCACCCTAACCTCACTCCAATTCATGTCCCACCCTACCCCACTTTTATATATAGTATTTAAAGATAAAGATTTAGATATAGATATTTTACAAAAAGCAAGTTTTCATCCTAGAAAGAGCAGACTGTATTAGTCTCGAAAGTAATTGTGTTCCGAACACATAGTTCACGTACAATTTCAAAATTGCTCGACCCTTTTTCCTGTATTTGTGTCCAATATAACCGATATATGACTCAACTCATAAAATTTTATGGATATAATACTATTATATCATGGTTAATATTATTATGTCTTGATTAAAGCTATTTACATAAATGCATGGCTATCTAGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGTATAAAGATTTCTTATTCGAATAGTTCAATTAATAGATCTTTTCATCGATGTTATGATATCATAACTACTTAATCTTCATTCACGTTGATAAGACAAAACATATCCATCATAGTTTAATTAATGGTTCCATGCATATCCTAGGTTTTAAGGAAAAAAAAACATGTTTGCATGTTTGTGTCGTGTCATGTTTTATCTTCTGTCGATATTCATAGTTCTTAAGTTGTGTACATCGATAGCATTGATTATGAAAAAAACATGATCGAATGTGTATATATATATATATGTAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGGTATGCTTTCAAAACAAACCAAAAAGTCTCTATCTTTTGGTCACTTTGATGTGTTCTTATAGGCATTGAAATTAATTGACCTTTGTGATGCAGATGAAGTTCATGTGTGAAGAGATTGATGCATTGAGGAACCAGGTTCGATTTTTTTTTTTTTTTTTGGCTTAATTTATGTTATTTAGTTGATTAGGAATCAAATTGGGAAATAAAAAATGGGTTTGAGAAGAAAATGAACATTAATGGCCATCGTCGACCATGAATGTTCACCGACGATGACCGTTAACCACCGCCTACTACTGGAGACTAACAACTAAGGGCTCGGGATTGGAAATTTATGATAGGCAACTGATGACTAGTAGTTAGTGATCGAGGACCGTGGCTAGAGGACAGTGGCTAGTGATCGGGCCAAGGGTCTAATAACCAATGACCACTTTAGTGACTAGTAGCCAATGACCGAAATCGAGACCAGGGATAGGCAATCAACAGTTGAGGATTATTGGGAGAGGAGTTCCACATCGGCTAATTAAGGGATTGATCATGGGTTTATAAGTAGGGAATACATTTCCGTTGGTATGAGGCCTTTTGGGGAAGCTCAAAGCAAAGCCACGAGAGTTTATGGTCAAAGTAGACAATATCATATCATTGTGAAGCTTTGTGGTTCCTAATATGTTATTAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTCAAATTTTGAACAAAATAGCTGTGAGCCTCGAAGATTTTGTCAAAAGTGACTAAAGTGTCGAACAAATGGTATATTTTGTTTGAGGGCTCTATTGGAGGGATCGAGTCTAGATTAAGGGAAGGTTGTTCAAAGGCTCCATAAACCTCAGGAAGGCTCTATGGTTTACTTTGTTCAAGGGGAGGATTCATGAGGATTGTAGGGAGAGAAATCTCACATTGGCTAATTAAGGGGTTTATCATGGGTTTATAGGTAAGAAATATATCTCTATCAGCATGAGGCCTTTTGGAGAAACCAAAAGCAAAACTATGAGAGCTTATGCTCAAAATGGACAATATCATACCATTGTGGAGGTTCGTGGTTCCTAACACGGTATTAGAGTCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAATTCGAACAAAAAAGTTGTGAGCCTCGAAGATGTAGTCAAAAGTGACTCAAGTGTTGGACAAATGGTGTATTTTTTTCGAGGACTTCAGAGGAGGAGTCGAGCCTCGATTAAGGAGAGGATGTTCGAGGGATCCATAGGCCTCAGGGAAGGCTCTATGGTGTACTTTGTTAGAGGGGAGGATTGTTGAGGATTGTTGGGATAGGAGTCCCACATTGGCTAATTAAGGGGTTGATTATGGGTTTATAAGTAAGAAATACATTTCAATTGGTATGAGCTCTTCTGGAGATACAAAAAACAAGAGTCTATTAACTAGTGGTCATTAACTACTTGTCATTGGTCTTCATCACAAGTAATTGATCGTTGGTCTCAAGTCCCCAATCCCAATCATTGGCGTGGTCAATGGTCAGTAATCTCTAGTCCTAGTTGCCAATTTTTGGTCCCATGGCATCGTTATCGATCAATAGTTGTTAATCCTCGATCCTAGTTGCTTGTCACTAGTCTCTTGTCCATGGTCCTAATTGTTGGTCATTGGTCGTTTGTAGTTGGTAGCTGGACAGAGGAATATGGACAACCCATTAGTAATGACCACCCACCAACCACCTACAGCCACTCCTATCTAAAAATAGGAACAGGAGACCTATGACCAAAGACTACTCATGTGGGATCCCACATTGATTGGAGAGATCCTCGAATACCAACGAGGACATTGGACCCCAAAGGTGGGTGAATTATGAGATCTCACATCGATTGGTGAGGATAACGAGTGCCAGTGAGAATGTTGGGTCCCGAAAGATGGTGGATTGTGAGATCTCACATCGGTTGAAGAGGAGAACGAAATATTCTTTATAAGAGTGCAGAAACCTCTCTCTAACACACATTTTAGGACAATATCTGCTAGCAGTGGGCTTGGGTTATTACAACACTAGCCATTGTCAATGTAGATCATCACTAATCACTAGACCAATGTTCAAGACTAGAGACTAAGGTTAGACGATCAGTGACTAGGATCCGTGATTATTAACTTATGGAACAAATTTTTATTAAGAAAATGTTTACGAAAACATATAGTTTCGAAAAATATTCTTTTTCGGACAATCCACTAATAAAATTTTATTTATGTCTGAAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGGTAATTAACTCAAACATCGATAACTAAATTGTTATTTTCATAAAAGCGGTAACGTATGAGCTTTGGTGTTAAATGCAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACTAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAAGTTAGCTGCTAGAAAAGCATATGTTATATGTTTTAATGTAAAGACATGAGGACATCTATGTAGCTACTTACTCGTGTGAGGTTGAGGTTGCTGTTTTACTACTTTTAGCAGACTTTAACGTTGTTTTTATGCAAATAATGACAATGCATGTACATTGCTAATTG

mRNA sequence

CATTAGAGTGGTTTAAGGGCTTGTGAGTTTGAGAGGTTAAGAGTAGTAGAGATATTGCAGCGACCGGAAGCTAGTTCAAACTAGTGGAAGGTTGGGTGCAGAGCAGCTGCTGCAGAGTTCAAGAAATTGGTTGAAATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGCAAGCGCCGAGCTGGGCTCCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCAATGGACAACCAAACCCTGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGATGAAGTTCATGTGTGAAGAGATTGATGCATTGAGGAACCAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACTAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAAGTTAGCTGCTAGAAAAGCATATGTTATATGTTTTAATGTAAAGACATGAGGACATCTATGTAGCTACTTACTCGTGTGAGGTTGAGGTTGCTGTTTTACTACTTTTAGCAGACTTTAACGTTGTTTTTATGCAAATAATGACAATGCATGTACATTGCTAATTG

Coding sequence (CDS)

ATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGCAAGCGCCGAGCTGGGCTCCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCAATGGACAACCAAACCCTGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGATGAAGTTCATGTGTGAAGAGATTGATGCATTGAGGAACCAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACTAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAA

Protein sequence

MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATKGTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNTTNIEAVNITNCQYPLTIQDELFQLCT

Homology

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BLAST of Carg27640 vs. NCBI nr
Match: XP_022925494.1 (agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous-like MADS-box protein AGL12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.3 bits (1061), Expect = 4.8e-112
Identity = 205/206 (99.51%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYMNHTNGSQPPEPP+DNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 207
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

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BLAST of Carg27640 vs. NCBI nr
Match: XP_022973991.1 (agamous-like MADS-box protein AGL12 [Cucurbita maxima])

HSP 1 Score: 409.8 bits (1052), Expect = 5.3e-111
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYMNHTNGSQPPEP +DNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPRIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 207
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

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BLAST of Carg27640 vs. NCBI nr
Match: XP_011656111.1 (PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical protein Csa_5G650620 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 5.5e-100
Identity = 186/207 (89.86%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYM HTNG+QPP+PP+ +QTLEVKEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLRNALGGGGGEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKME-ENICN 180
            TLDELD+ EKQLEIWICQVRSTKMKFMCEEI+ALRNQE IL AANKYLHDKME ENI N
Sbjct: 121 MTLDELDIFEKQLEIWICQVRSTKMKFMCEEIEALRNQEFILTAANKYLHDKMEAENISN 180

Query: 181 TTNIEAVNITNCQYPLTIQDELFQLCT 207
           TTN+E VNITNCQYPLTIQDELFQLCT
Sbjct: 181 TTNMEPVNITNCQYPLTIQDELFQLCT 207

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BLAST of Carg27640 vs. NCBI nr
Match: XP_022149997.1 (agamous-like MADS-box protein AGL12 isoform X1 [Momordica charantia])

HSP 1 Score: 350.5 bits (898), Expect = 3.8e-93
Identity = 179/207 (86.47%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYMNHT+ +QPP+P ++NQTLE+KEEVNRLKQEIEV KGLRNA  GGG EG+
Sbjct: 61  GTMQGLIERYMNHTSRTQPPDPSIENQTLEIKEEVNRLKQEIEVQKGLRNAF-GGGAEGM 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180
            TLDELDM EKQLEIWICQVRSTKMKFMC+EI+AL+NQ+L+LKA NKYLHDKMEENI  T
Sbjct: 121 -TLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQDLMLKAVNKYLHDKMEENIGYT 180

Query: 181 TNIEAV-NITNCQYPLTIQDELFQLCT 207
           TNIEAV N TN QYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNNNTNFQYPLTIQDELFQLCT 205

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BLAST of Carg27640 vs. NCBI nr
Match: XP_022149998.1 (agamous-like MADS-box protein AGL12 isoform X2 [Momordica charantia])

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 168/207 (81.16%), Postives = 180/207 (86.96%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYMNHT+ +QPP+P ++NQTLE+KEEVNRLKQEIEV KGLRNA  GGG EG+
Sbjct: 61  GTMQGLIERYMNHTSRTQPPDPSIENQTLEIKEEVNRLKQEIEVQKGLRNAF-GGGAEGM 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180
            TLDELDM EKQLEIWICQVRSTKMKFMC+EI+AL+NQ              MEENI  T
Sbjct: 121 -TLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQ--------------MEENIGYT 180

Query: 181 TNIEAV-NITNCQYPLTIQDELFQLCT 207
           TNIEAV N TN QYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNNNTNFQYPLTIQDELFQLCT 191

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BLAST of Carg27640 vs. TAIR10
Match: AT1G71692.1 (AGAMOUS-like 12)

HSP 1 Score: 221.1 bits (562), Expect = 6.4e-58
Identity = 123/212 (58.02%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGK+QLKRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMNHTNGSQ-------PPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNAL 120
           GTM+G+I++YM  T G +         +  +    L+ K+E+N LKQEIE+L KG+    
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMF 120

Query: 121 GGGGVEGIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDK 180
           GGG  +G   L+EL +LEK LE WI Q+RS KM  M +EI +LRN+E +LK  NKYL +K
Sbjct: 121 GGG--DGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEK 180

Query: 181 MEENICNTTNIE-AVNITNCQYPLTIQDELFQ 204
           +EEN  +  +   AV  TN  YPLT+  E+FQ
Sbjct: 181 IEENNNSILDANFAVMETNYSYPLTMPSEIFQ 210

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BLAST of Carg27640 vs. TAIR10
Match: AT2G45660.1 (AGAMOUS-like 20)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-31
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGK Q+KRIEN   RQVTF KRR GLLKKA ELSVLCDAE+ + IFS  GKLYE A+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS- 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
             MQ  I+RY+ HT      +P  +     +K E   + ++IE L+  +  L G G+ G 
Sbjct: 61  SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGI-GT 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDK 173
            +++EL  +E+QLE  +  +R+ K +   E+I+ L+ +E  L A N+ L +K
Sbjct: 121 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170

[Close]

BLAST of Carg27640 vs. TAIR10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 74/178 (41.57%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RG+VQLKRIEN ++RQVTF KRRAGLLKKA E+SVLCDAE+ + +FS  GKL+E +T 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
             M+ ++ERY  ++   +    P  +       E NRLK +IE+L +  R+ LG    E 
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLG----ED 120

Query: 121 IRTLD--ELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 176
           ++ +   EL  LE+QL+  +  +R+ K + M E I+ L+ +E  ++  N  L  +++E
Sbjct: 121 LQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKE 174

[Close]

BLAST of Carg27640 vs. TAIR10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 72/178 (40.45%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RG+V+LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ + IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQ---TLEVKEEVNRLKQEIEVLKGLRNALGGGGV 120
            +M   +ERY     G+  P  P        L  ++E  +LK+  + L+  +  L G  +
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 EGIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 176
             + T  EL+ LE+QL+  + Q+R+ + +FM ++++ L+++E +L   NK L  ++ +
Sbjct: 121 GPLST-KELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177

[Close]

BLAST of Carg27640 vs. TAIR10
Match: AT2G03710.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 124.4 bits (311), Expect = 8.1e-29
Identity = 73/178 (41.01%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGKV+LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAEI + IFS  GKLYE  + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  GT-MQGLIERYMNHTNGSQPPEPPMDNQTLEVK-EEVNRLKQEIEVLKGLRNALGGGGVE 120
            + M   +++Y  H+  +   +P    + L+ K ++  +LK  +E+L+  +  L G  + 
Sbjct: 61  PSGMARTVDKYRKHSYATM--DPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELS 120

Query: 121 GIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEEN 177
            +  ++EL+ LE+Q++  + Q+RSTK + M +++  L+ +E +L   N+ L  K+E++
Sbjct: 121 EM-DVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDS 175

[Close]

BLAST of Carg27640 vs. Swiss-Prot
Match: sp|Q38841|AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 123/212 (58.02%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGK+QLKRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMNHTNGSQ-------PPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNAL 120
           GTM+G+I++YM  T G +         +  +    L+ K+E+N LKQEIE+L KG+    
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMF 120

Query: 121 GGGGVEGIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDK 180
           GGG  +G   L+EL +LEK LE WI Q+RS KM  M +EI +LRN+E +LK  NKYL +K
Sbjct: 121 GGG--DGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEK 180

Query: 181 MEENICNTTNIE-AVNITNCQYPLTIQDELFQ 204
           +EEN  +  +   AV  TN  YPLT+  E+FQ
Sbjct: 181 IEENNNSILDANFAVMETNYSYPLTMPSEIFQ 210

[Close]

BLAST of Carg27640 vs. Swiss-Prot
Match: sp|Q2QW55|MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS33 PE=2 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 8.3e-47
Identity = 99/176 (56.25%), Postives = 131/176 (74.43%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGKVQ++RIENPVHRQVTFCKRR GLLKKA+ELSVLCDA++GV IFS+ GKL+ELAT 
Sbjct: 1   MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           G M  L+ERY ++  G Q     +  Q +  ++ +  L++EI++L +GLR+  GGG   G
Sbjct: 61  GNMHNLVERYQSNVAGGQMEPGALQRQQV-AEQGIFLLREEIDLLQRGLRSTYGGGA--G 120

Query: 121 IRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 176
             TLD+L  LEK LE+WI Q+R+TKM+ M +EI  LRN+E ILK AN+ L +K++E
Sbjct: 121 EMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173

[Close]

BLAST of Carg27640 vs. Swiss-Prot
Match: sp|A2YQK9|MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS26 PE=2 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 103/176 (58.52%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQL+RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           GTM+ LIERY +  +G Q       +Q ++ K+E   LKQEI +L KGLR   G    E 
Sbjct: 61  GTMEELIERYKS-ASGEQ--ANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 120

Query: 121 IRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 176
           + T++EL+ LE+ LEIW+  +RS KM+ M +EI AL+++E +LKAAN+ L +K+ E
Sbjct: 121 M-TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172

[Close]

BLAST of Carg27640 vs. Swiss-Prot
Match: sp|Q0J8G8|MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS26 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 103/176 (58.52%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQL+RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           GTM+ LIERY +  +G Q       +Q ++ K+E   LKQEI +L KGLR   G    E 
Sbjct: 61  GTMEELIERYKS-ASGEQ--ANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 120

Query: 121 IRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEE 176
           + T++EL+ LE+ LEIW+  +RS KM+ M +EI AL+++E +LKAAN+ L +K+ E
Sbjct: 121 M-TVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172

[Close]

BLAST of Carg27640 vs. Swiss-Prot
Match: sp|K4DEK0|J2_SOLLC (MADS-box protein J2 OS=Solanum lycopersicum OX=4081 GN=J2 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 80/179 (44.69%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RG+V+LKRIEN ++RQVTF KRR GLLKKA ELS+LCDAE+ + IFS+ GKLYE ++ 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSSRGKLYEFSSA 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
            +M   +E+Y   +  S  P  P+ +  +   E V RLK  +E+L +  R+ LG    E 
Sbjct: 61  SSMMTTLEKYQQCSYASLDPMLPVSDTQMNYNEYV-RLKARVELLQRSQRHILG----ED 120

Query: 121 IRTLD--ELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEEN 177
           + TL+  EL+ LE QL+  + +VRS K + M +++  L+ +E +L+ ANK L +K+EE+
Sbjct: 121 LGTLNSKELEQLEHQLDASLKKVRSKKTQSMLDQLADLQEKEQMLEEANKQLKNKLEES 174

[Close]

BLAST of Carg27640 vs. TrEMBL
Match: tr|A0A0A0KW77|A0A0A0KW77_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.7e-100
Identity = 186/207 (89.86%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYM HTNG+QPP+PP+ +QTLEVKEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLRNALGGGGGEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKME-ENICN 180
            TLDELD+ EKQLEIWICQVRSTKMKFMCEEI+ALRNQE IL AANKYLHDKME ENI N
Sbjct: 121 MTLDELDIFEKQLEIWICQVRSTKMKFMCEEIEALRNQEFILTAANKYLHDKMEAENISN 180

Query: 181 TTNIEAVNITNCQYPLTIQDELFQLCT 207
           TTN+E VNITNCQYPLTIQDELFQLCT
Sbjct: 181 TTNMEPVNITNCQYPLTIQDELFQLCT 207

[Close]

BLAST of Carg27640 vs. TrEMBL
Match: tr|A0A1S4E2G4|A0A1S4E2G4_CUCME (agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79
Identity = 157/191 (82.20%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           GTMQGLIERYM HTNG+QPP+PP+ +QT E KEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLRNALGGGGGEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180
             LDELDM EKQLEIWICQVRSTKMKFM EEI+ALRNQ          L + MEENI NT
Sbjct: 121 MRLDELDMFEKQLEIWICQVRSTKMKFMSEEIEALRNQV-------GCLINFMEENISNT 180

Query: 181 TNIEAVNITNC 192
           TN+E VNITNC
Sbjct: 181 TNMEPVNITNC 184

[Close]

BLAST of Carg27640 vs. TrEMBL
Match: tr|A0A2P4LRR0|A0A2P4LRR0_QUESU (Agamous-like mads-box protein agl12 OS=Quercus suber OX=58331 GN=CFP56_45236 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 3.6e-71
Identity = 151/206 (73.30%), Postives = 166/206 (80.58%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           GTMQGLIERYM    G+Q PEP ++ Q L+ KEE+  LKQE+E+L KGLR   GGG   G
Sbjct: 61  GTMQGLIERYMESNRGAQ-PEPDIETQPLDAKEEIKLLKQEVEILQKGLRYMFGGG--VG 120

Query: 121 IRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICN 180
             TLDELD+LEK LEIWIC +RSTKM  M EEI  LRN+E ILKAANKYL DK+EE   N
Sbjct: 121 TMTLDELDVLEKHLEIWICNIRSTKMNIMYEEIQLLRNKEGILKAANKYLQDKIEE---N 180

Query: 181 TTNIE-AVNITNCQYPLTIQDELFQL 205
           T  I+   N TN  YPLTIQ+E+FQL
Sbjct: 181 TGMIDFTPNTTNFAYPLTIQNEIFQL 200

[Close]

BLAST of Carg27640 vs. TrEMBL
Match: tr|A0A2K1Y3T0|A0A2K1Y3T0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G102600v3 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.5e-66
Identity = 144/205 (70.24%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIEN VHRQVTFCKRR+GLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENSVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQ-TLEVKEEVNRLKQEIEVL-KGLRNALGGGGVE 120
           GTMQGLIERYM  + G+QP    ++ Q  ++VKEE+N LKQEIE+L KGLR   GG   E
Sbjct: 61  GTMQGLIERYMKSSRGTQPEPAAIETQPDMDVKEEINMLKQEIEILQKGLRYMFGGRAAE 120

Query: 121 GIRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENIC 180
              TLDEL  LEK LEIWI Q+RSTKM  M +EI  LRN+E ILKAAN+YL DK+EENI 
Sbjct: 121 --MTLDELIELEKHLEIWIYQIRSTKMDIMFKEIQQLRNKEGILKAANQYLQDKVEENIV 180

Query: 181 NTTNIEAVNITNCQYPLTIQDELFQ 204
            T +  A   TN  YPLTIQ+E+FQ
Sbjct: 181 ITNS--APITTNIPYPLTIQNEIFQ 201

[Close]

BLAST of Carg27640 vs. TrEMBL
Match: tr|I1LNS4|I1LNS4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100783345 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.0e-65
Identity = 136/205 (66.34%), Postives = 156/205 (76.10%), Query Frame = 0


Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           GTMQGLIERYM  + G+QP   P  +  L+ KEE N LKQEI+ L KG+R+  GGG    
Sbjct: 61  GTMQGLIERYMKFSRGAQPEAAPEAHPLLDAKEETNMLKQEIQTLQKGIRHLFGGG--NK 120

Query: 121 IRTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICN 180
             T+DEL +LEK LE WI  +RS KM  M +EI AL+++E  LKAANKYLHDK+ EN   
Sbjct: 121 TMTIDELQVLEKNLETWIYHIRSMKMNIMLQEIQALKDKEGTLKAANKYLHDKIVENTAI 180

Query: 181 TTNIEAVNITNCQYPLTIQDELFQL 205
           +   +    T+  YPL IQDE+FQL
Sbjct: 181 SNFAQFATDTSNSYPLIIQDEVFQL 203

The following BLAST results are available for this feature:

BLAST of Carg27640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925494.1	4.8e-112	99.51	agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous...	[more]
XP_022973991.1	5.3e-111	99.03	agamous-like MADS-box protein AGL12 [Cucurbita maxima]	[more]
XP_011656111.1	5.5e-100	89.86	PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hyp...	[more]
XP_022149997.1	3.8e-93	86.47	agamous-like MADS-box protein AGL12 isoform X1 [Momordica charantia]	[more]
XP_022149998.1	3.6e-83	81.16	agamous-like MADS-box protein AGL12 isoform X2 [Momordica charantia]	[more]

BLAST of Carg27640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71692.1	6.4e-58	58.02	AGAMOUS-like 12	[more]
AT2G45660.1	2.3e-31	44.19	AGAMOUS-like 20	[more]
AT1G69120.1	1.6e-29	41.57	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	1.6e-29	40.45	K-box region and MADS-box transcription factor family protein	[more]
AT2G03710.1	8.1e-29	41.01	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Carg27640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38841\|AGL12_ARATH	1.1e-56	58.02	Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=...	[more]
sp\|Q2QW55\|MAD33_ORYSJ	8.3e-47	56.25	MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
sp\|A2YQK9\|MAD26_ORYSI	1.8e-46	58.52	MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS2...	[more]
sp\|Q0J8G8\|MAD26_ORYSJ	1.8e-46	58.52	MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
sp\|K4DEK0\|J2_SOLLC	3.7e-31	44.69	MADS-box protein J2 OS=Solanum lycopersicum OX=4081 GN=J2 PE=1 SV=1	[more]

BLAST of Carg27640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KW77\|A0A0A0KW77_CUCSA	3.7e-100	89.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1	[more]
tr\|A0A1S4E2G4\|A0A1S4E2G4_CUCME	1.2e-79	82.20	agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4...	[more]
tr\|A0A2P4LRR0\|A0A2P4LRR0_QUESU	3.6e-71	73.30	Agamous-like mads-box protein agl12 OS=Quercus suber OX=58331 GN=CFP56_45236 PE=...	[more]
tr\|A0A2K1Y3T0\|A0A2K1Y3T0_POPTR	4.5e-66	70.24	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G102600v3 PE=...	[more]
tr\|I1LNS4\|I1LNS4_SOYBN	5.0e-65	66.34	Uncharacterized protein OS=Glycine max OX=3847 GN=100783345 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR036879	TF_MADSbox_sf
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27640-RA	Carg27640-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..203
None	No IPR available	PANTHER	PTHR11945:SF152	AGAMOUS-LIKE MADS-BOX PROTEIN AGL12	coord: 1..203
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 80.42 coord: 3..23 score: 64.07 coord: 38..59 score: 50.51
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 2.8E-35 score: 133.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..56 e-value: 1.5E-22 score: 78.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 29.604
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 87..173 e-value: 2.3E-17 score: 62.9
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 88..179 score: 11.016
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 14..78 e-value: 4.3E-24 score: 85.9
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 1..75
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..78 e-value: 1.08427E-40 score: 134.217

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27640	Cla012507	Watermelon (97103) v1	carwmB0347
Carg27640	MELO3C022205	Melon (DHL92) v3.5.1	carmeB0361
Carg27640	ClCG08G000470	Watermelon (Charleston Gray)	carwcgB0348
Carg27640	CSPI05G31260	Wild cucumber (PI 183967)	carcpiB0392
Carg27640	CmaCh09G012390	Cucurbita maxima (Rimu)	carcmaB0500
Carg27640	CmoCh09G013050	Cucurbita moschata (Rifu)	carcmoB0483
Carg27640	Lsi08G000400	Bottle gourd (USVL1VR-Ls)	carlsiB323
Carg27640	Cp4.1LG06g10070	Cucurbita pepo (Zucchini)	carcpeB0496
Carg27640	CsGy5G030600	Cucumber (Gy14) v2	carcgybB0367
Carg27640	CsaV3_5G040310	Cucumber (Chinese Long) v3	carcucB0391

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27640	Melon (DHL92) v3.6.1	carmedB0366
Carg27640	Watermelon (97103) v2	carwmbB0372