Carg27482 (gene) Silver-seed gourd

Overview
NameCarg27482
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionS-norcoclaurine synthase-like
LocationCucurbita_argyrosperma_scaffold_422 : 88997 .. 90255 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTAACAGTTTCTAATAATCTTCGTCTTGTTTTCGGCTTTTAAACTTCTTATACATATTTTTTCATTCAATATTTGATACGTCGTTCGGTTTGAGAGTTGTTTTATTGAAGACTTGTTTTTATTGATGTCTCAATTTTATGTAAATGTCTCCATTTGTTAATGTAAATTTCTAAGACAAAATTATATATATAAAAAAAGAAGATAATATTAAAAGAATATTTAATATTTATATTATATTATATTATATTATATTAAGGACATTTTGTTATTATTTTTTTTATGTTTTAAATTTATTTAAGATTTCTTGAGTTTTTCTTTTAAAATGTGAATTATACCAAAGAATTGGTCTACCTTTAAACATAGTAAATTAAAAATGAAATTCTTATAATGATTTTGATGTTATTAATGAGTTTGTTTGTAGTTTGATGTTACTAATGATTTTGATGTTACTAATGATTTTGATGTTTTATTTTTGAGGTTTACTTGGAATGAATTTCACATGATTAATTTTTACTAAAAAGGGTTTTAATAATTTAAAACTAAAACCCAAATATTTATTAAATAGAGGTTTAATAAAAGGTTGAATTGAATTATTAATTATTTTGGAGAGAAATTTGATTTAAAATACGATTAATTCAATGAAGCCGATGCAATGTATATGAACTAAATCATCATAATACTACTAAACTTCACGTATTAAATTGTTACAAATTTAAAAATTATAAGAGTAAATATACGTGTAAGAGTGCTGACTTAATCTACAAGTAATGTAAGAGATTTGATATATAAGGTTAAACTAGAGCACGTCATGTGGATTTGATTTAACGAAACAAAAATTTACATACAAATGCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCGTATAAAAAGAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG

mRNA sequence

ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG

Coding sequence (CDS)

ATGTTGGGTAAACTCTCTCATGAGTCCGTGATCCACGCGCCAGCCACCGTGGCATGGCAGCTCTACGGAGGTCTTGAACTTGCACGACTTGTCGAAAACCGCTTCTCGAACCTTATCCAAAAAATTGAGGTGGTTGAAGGCGACGGAGGAGAAGGAACGATTCTTAATCTTATTTTCCCATCAGGTGTAGGTCGTTTCTCAAGTTTTAAAGAGAAATTCACAAGCATAGATAATGAGAATCAGACGGATAGCTGCATTGTTGAATCCACAATTGAATATGAAATAAAGGAAGAAGCTGCTGCAAATGCCTCACTTGTTAATATACAATTTTTCATAGACATTGGTCAAACAGCAAACGACCATCTACTTCACAACAAACAGCCTAAAGATGCATAG

Protein sequence

MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFPSGVGRFSSFKEKFTSIDNENQTDSCIVESTIEYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA
Homology
[Close]
BLAST of Carg27482 vs. NCBI nr
Match: XP_023513284.1 (S-norcoclaurine synthase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 123/160 (76.88%), Postives = 126/160 (78.75%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLGKLSHE+VI APATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGT+LNLIFP
Sbjct: 1   MLGKLSHETVIQAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTVLNLIFP 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            GVGRFSSFKEKFT IDNEN+                              DSCIVESTI
Sbjct: 61  PGVGRFSSFKEKFTRIDNENRIKETEIVEGGFLDIGFTLYRVCLKIVENGDDSCIVESTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYEIKEEAAANASLVNIQFFIDI QTANDHLLHNKQPKDA
Sbjct: 121 EYEIKEEAAANASLVNIQFFIDIAQTANDHLLHNKQPKDA 160

[Close]
BLAST of Carg27482 vs. NCBI nr
Match: XP_022944468.1 (S-norcoclaurine synthase 2-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 6.3e-57
Identity = 122/160 (76.25%), Postives = 124/160 (77.50%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLGKLSHESVI APATVAWQLYGG ELARLVENRFSNLIQKIEVVEGDGGEGT+LNLIFP
Sbjct: 1   MLGKLSHESVIQAPATVAWQLYGGFELARLVENRFSNLIQKIEVVEGDGGEGTVLNLIFP 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            GVGRFSSFKEKFT IDNEN+                              DSCIVESTI
Sbjct: 61  PGVGRFSSFKEKFTRIDNENRIKETEVVEGGFLDIGFTLYRVRLKMVENGDDSCIVESTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYEIKEEAAANASLVNIQFFIDI QT NDHLLHNKQPKDA
Sbjct: 121 EYEIKEEAAANASLVNIQFFIDIAQTENDHLLHNKQPKDA 160

[Close]
BLAST of Carg27482 vs. NCBI nr
Match: XP_022986627.1 (S-norcoclaurine synthase 2-like [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLG+LSHE+ I APATVAWQLYGGLELARLVENR SNLIQKIEVVEGDGGEGT+LNLIFP
Sbjct: 1   MLGQLSHEAAIQAPATVAWQLYGGLELARLVENRLSNLIQKIEVVEGDGGEGTVLNLIFP 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G+G  SS+KEKFT IDNEN+                              DSCIVESTI
Sbjct: 61  PGLGGASSYKEKFTKIDNENRIKETEVVEGGFLDIGFTLYRVRLKIVENGDDSCIVESTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYEIKEEAAANASLV +Q  IDI Q ANDHLLH KQ KDA
Sbjct: 121 EYEIKEEAAANASLVTLQPLIDIAQAANDHLLHYKQLKDA 160

[Close]
BLAST of Carg27482 vs. NCBI nr
Match: XP_022943440.1 (S-norcoclaurine synthase 1-like [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-48
Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLG+LSHE+VI APATVAWQLYGGLELARLVENR SNLIQKIEVVEGDGGEGT+LNLIFP
Sbjct: 1   MLGQLSHEAVIQAPATVAWQLYGGLELARLVENRLSNLIQKIEVVEGDGGEGTVLNLIFP 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G+G   S+KEKFT IDNEN+                              DSCIVESTI
Sbjct: 61  PGLGGAPSYKEKFTKIDNENRIKETEVVEGGFLDIGFTLYRVRLKIVENGDDSCIVESTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYEIKEEAAANASLV +Q  IDI Q ANDHLLH KQ KDA
Sbjct: 121 EYEIKEEAAANASLVTLQPLIDIAQAANDHLLHYKQLKDA 160

[Close]
BLAST of Carg27482 vs. NCBI nr
Match: XP_023513283.1 (S-norcoclaurine synthase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46
Identity = 106/160 (66.25%), Postives = 114/160 (71.25%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLG+LSHE+ I APATVAWQLYGGLELARLVENR SNLIQKIEVVEG+GGEGT+LNLIF 
Sbjct: 1   MLGQLSHEAAIQAPATVAWQLYGGLELARLVENRLSNLIQKIEVVEGNGGEGTVLNLIFL 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G+G   S+KEKFT IDNEN+                              DSCIVESTI
Sbjct: 61  PGLGGAPSYKEKFTKIDNENRIKETEVVEGGFLDIGFTLYRVRLKIVENGDDSCIVESTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYEIKEEAAANASLV +Q  IDI Q ANDHLLH KQ KDA
Sbjct: 121 EYEIKEEAAANASLVTLQPLIDIAQAANDHLLHYKQLKDA 160

[Close]
BLAST of Carg27482 vs. Swiss-Prot
Match: sp|Q4QTJ1|NCS2_PAPSO (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 39/154 (25.32%), Postives = 76/154 (49.35%), Query Frame = 0 

Query: 4   KLSHESVIHAPATVAWQLYGGLELARLVEN-RFSNLIQKIEVVEGDGGEGTILNLIFPSG 63
           ++ ++  +   A   W +Y   ++ RL+ +     + QK++V+EG+GG GT+L+++FP G
Sbjct: 42  EIRYDLEVPTSADSIWSVYSCPDIPRLLRDVLLPGVFQKLDVIEGNGGVGTVLDIVFPPG 101

Query: 64  VGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTIEY 123
                S+KEKF +I++E +                              +SC++ES+I Y
Sbjct: 102 AVP-RSYKEKFVNINHEKRLKEVIMIEGGYLDMGCTFYMDRIHIFEKTPNSCVIESSIIY 161

Query: 124 EIKEEAAAN-ASLVNIQFFIDIGQTANDHLLHNK 127
           E+KEE A   A L+  +    + +  + ++L  +
Sbjct: 162 EVKEEYAGKMAKLITTEPLESMAEVISGYVLKKR 194

[Close]
BLAST of Carg27482 vs. Swiss-Prot
Match: sp|Q4QTJ2|NCS1_PAPSO (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08
Identity = 37/154 (24.03%), Postives = 74/154 (48.05%), Query Frame = 0 

Query: 4   KLSHESVIHAPATVAWQLYGGLELARLVEN-RFSNLIQKIEVVEGDGGEGTILNLIFPSG 63
           ++++E+ +   A   W +Y   ++ RL+ +     + +K++V+ G+GG GT+L++ FP G
Sbjct: 42  EITYETEVQTSADSIWNVYSSPDIPRLLRDVLLPGVFEKLDVIAGNGGVGTVLDIAFPLG 101

Query: 64  VGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTIEY 123
                 +KEKF  I++E +                              +SC++ES+I Y
Sbjct: 102 AVP-RRYKEKFVKINHEKRLKEVVMIEGGYLDMGCTFYMDRIHIFEKTPNSCVIESSIIY 161

Query: 124 EIKEEAAAN-ASLVNIQFFIDIGQTANDHLLHNK 127
           E+KEE A   A L+  +    + +  + ++L  +
Sbjct: 162 EVKEEYAGKMAKLITTEPLESMAEVISGYVLKKR 194

[Close]
BLAST of Carg27482 vs. Swiss-Prot
Match: sp|A2A1A1|NCS2_COPJA (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05
Identity = 39/127 (30.71%), Postives = 58/127 (45.67%), Query Frame = 0 

Query: 5   LSHESVIHAPATVAWQLYGGLELA-RLVENRFSNLIQKIEVVEGDGGEGTILNLIFPSGV 64
           L HE  + A A   W + G  EL   L +   + +  K E+  GDGGEG+IL++ FP   
Sbjct: 41  LYHELEVAASADEVWSVEGSPELGLHLPDLLPAGIFAKFEIT-GDGGEGSILDMTFPP-- 100

Query: 65  GRF-SSFKEKFTSIDNENQ-----------------------------TDSCIVESTIEY 101
           G+F   ++EKF   D++N+                              DSC+++ST EY
Sbjct: 101 GQFPHHYREKFVFFDHKNRYKLVEQIDGDFFDLGVTYYMDTIRVVATGPDSCVIKSTTEY 160

[Close]
BLAST of Carg27482 vs. TrEMBL
Match: tr|A0A1S3CA50|A0A1S3CA50_CUCME (S-norcoclaurine synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103498383 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36
Identity = 88/158 (55.70%), Postives = 104/158 (65.82%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLG+L HE+VI  PA VAWQL+GGLEL R+V  +  NL +KIE+VEGDGGEGTI NLIF 
Sbjct: 1   MLGQLRHETVIDVPANVAWQLFGGLELGRIVGEQLPNLFEKIELVEGDGGEGTIFNLIFA 60

Query: 61  SGVGRFSSFKEKFTSIDN-----------------------------ENQTDSCIVESTI 120
            G+G FS++KEKFT IDN                             EN  D CIVE+T+
Sbjct: 61  PGLG-FSNYKEKFTKIDNDNRIKEAETVEGGFLNIGFTLYRVRFKIIENGEDKCIVETTV 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPK 130
           EYEI EEAAANASLV +Q  IDI Q A+++LLHNK PK
Sbjct: 121 EYEIMEEAAANASLVTLQPLIDIVQVASNYLLHNKNPK 157

[Close]
BLAST of Carg27482 vs. TrEMBL
Match: tr|A0A0A0LNC6|A0A0A0LNC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G439140 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-36
Identity = 88/158 (55.70%), Postives = 103/158 (65.19%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           MLGKL HE+VI  PA V WQL+G LEL R+V  +  NL +KIE+VEGDGGEGT+LNLIF 
Sbjct: 1   MLGKLQHEAVIDVPANVTWQLFGSLELGRIVGEQLPNLFEKIELVEGDGGEGTVLNLIFA 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G+G  SS+KEKFT IDNEN+                              D CIVE+TI
Sbjct: 61  PGLGT-SSYKEKFTKIDNENRIKETEIVEGGFLNIGFTLYRVRFKIIENGEDKCIVETTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPK 130
           EYEI EEAAANASLV +Q  I+I Q AN++LLHNK PK
Sbjct: 121 EYEIMEEAAANASLVTLQPLIEIVQLANNYLLHNKNPK 157

[Close]
BLAST of Carg27482 vs. TrEMBL
Match: tr|A0A2N9IYT5|A0A2N9IYT5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57201 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 73/160 (45.62%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           M+G++SHE  ++ PA+ AW+LYG L L++LVE   SN I+KIEV+EGDGG GTI+ L F 
Sbjct: 1   MVGQVSHEVEVNVPASEAWELYGTLRLSKLVEEVLSNFIEKIEVIEGDGGAGTIIQLTFA 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G   FS  KEKFT +DNE +                              DSCI+ STI
Sbjct: 61  PGTAGFSGCKEKFTKVDNEKRLKETELIEGGQLELGFTLYRDRFEVIEKGEDSCIIRSTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKDA 132
           EYE+KE+AAANASLV+I+   ++ + A ++L+ NK  KDA
Sbjct: 121 EYEVKEDAAANASLVSIEPLANVAELAKNYLIKNKTAKDA 160

[Close]
BLAST of Carg27482 vs. TrEMBL
Match: tr|A0A2P4KZR2|A0A2P4KZR2_QUESU (S-norcoclaurine synthase 2 OS=Quercus suber OX=58331 GN=CFP56_68018 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-28
Identity = 72/159 (45.28%), Postives = 97/159 (61.01%), Query Frame = 0 

Query: 1   MLGKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFP 60
           M+G++SHE  ++  A+ AW+LYG L+ ++LVE   SN I+KIEV+EGDGG GTI+ L F 
Sbjct: 1   MVGQVSHEVEVNVSASEAWELYGTLQFSKLVEEVLSNFIEKIEVIEGDGGVGTIIKLTFA 60

Query: 61  SGVGRFSSFKEKFTSIDNENQ-----------------------------TDSCIVESTI 120
            G G F+  KEKFT +DNE +                              DSCI+ STI
Sbjct: 61  PGTG-FTGCKEKFTKVDNEGRVKETEVIEGGFLELGFTLYRDRFEVIEKGNDSCIIRSTI 120

Query: 121 EYEIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPKD 131
           EYE+KE+AAANASLV+I+   ++ + A +HLL NK  KD
Sbjct: 121 EYELKEDAAANASLVSIEPLANVAELAKNHLLKNKTAKD 158

[Close]
BLAST of Carg27482 vs. TrEMBL
Match: tr|A0A2I4FBE1|A0A2I4FBE1_9ROSI (S-norcoclaurine synthase 2-like OS=Juglans regia OX=51240 GN=LOC108997241 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-27
Identity = 77/156 (49.36%), Postives = 87/156 (55.77%), Query Frame = 0 

Query: 3   GKLSHESVIHAPATVAWQLYGGLELARLVENRFSNLIQKIEVVEGDGGEGTILNLIFPSG 62
           G+LSHE  I  PAT AW+LYG L LA LVE   S LIQKIEV+EGDGG GT+L L F  G
Sbjct: 4   GQLSHEMKIEVPATEAWELYGSLRLANLVE-EVSTLIQKIEVLEGDGGLGTVLKLTFVPG 63

Query: 63  VGRFSSFKEKFTSIDNENQT-----------------------------DSCIVESTIEY 122
               SS+ EKFT IDNE +                              DSCI+ STIEY
Sbjct: 64  TPGLSSYSEKFTKIDNEKRVKETEAVEGGYLEMGFTLYRIRFEVIEEGDDSCIIRSTIEY 123

Query: 123 EIKEEAAANASLVNIQFFIDIGQTANDHLLHNKQPK 130
           E+KEEAAANAS V I+    I Q A  +L  NK  K
Sbjct: 124 EVKEEAAANASYVTIEPLEGIAQIAKSYLTKNKAAK 158

The following BLAST results are available for this feature:
BLAST of Carg27482 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513284.11.3e-5776.88S-norcoclaurine synthase 2-like [Cucurbita pepo subsp. pepo][more]
XP_022944468.16.3e-5776.25S-norcoclaurine synthase 2-like [Cucurbita moschata][more]
XP_022986627.13.1e-4868.13S-norcoclaurine synthase 2-like [Cucurbita maxima][more]
XP_022943440.14.1e-4868.13S-norcoclaurine synthase 1-like [Cucurbita moschata][more]
XP_023513283.16.5e-4666.25S-norcoclaurine synthase 1-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg27482 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg27482 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4QTJ1|NCS2_PAPSO7.4e-0925.32S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1[more]
sp|Q4QTJ2|NCS1_PAPSO4.8e-0824.03S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1[more]
sp|A2A1A1|NCS2_COPJA1.0e-0530.71S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2[more]
BLAST of Carg27482 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CA50|A0A1S3CA50_CUCME1.8e-3655.70S-norcoclaurine synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103498383 PE=4 SV=... [more]
tr|A0A0A0LNC6|A0A0A0LNC6_CUCSA2.4e-3655.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G439140 PE=4 SV=1[more]
tr|A0A2N9IYT5|A0A2N9IYT5_FAGSY5.7e-3045.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57201 PE=4 SV=1[more]
tr|A0A2P4KZR2|A0A2P4KZR2_QUESU3.1e-2845.28S-norcoclaurine synthase 2 OS=Quercus suber OX=58331 GN=CFP56_68018 PE=4 SV=1[more]
tr|A0A2I4FBE1|A0A2I4FBE1_9ROSI7.6e-2749.36S-norcoclaurine synthase 2-like OS=Juglans regia OX=51240 GN=LOC108997241 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27482-RACarg27482-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3DG3DSA:3.30.530.20coord: 1..84
e-value: 6.1E-17
score: 63.8
NoneNo IPR availablePANTHERPTHR31213:SF19SUBFAMILY NOT NAMEDcoord: 1..81
NoneNo IPR availablePANTHERPTHR31213:SF19SUBFAMILY NOT NAMEDcoord: 79..127
NoneNo IPR availablePANTHERPTHR31213FAMILY NOT NAMEDcoord: 1..81
NoneNo IPR availablePANTHERPTHR31213FAMILY NOT NAMEDcoord: 79..127
NoneNo IPR availableSUPERFAMILYSSF55961Bet v1-likecoord: 1..124

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg27482Cucumber (Gy14) v2carcgybB0550
Carg27482Cucumber (Gy14) v1carcgyB0622
Carg27482Cucurbita maxima (Rimu)carcmaB0760
Carg27482Cucurbita moschata (Rifu)carcmoB0738
Carg27482Cucurbita pepo (Zucchini)carcpeB0770
Carg27482Wild cucumber (PI 183967)carcpiB0580
Carg27482Cucumber (Chinese Long) v2carcuB0574
Carg27482Cucumber (Chinese Long) v3carcucB0581
Carg27482Bottle gourd (USVL1VR-Ls)carlsiB494
Carg27482Melon (DHL92) v3.6.1carmedB0556
Carg27482Watermelon (97103) v1carwmB0542
Carg27482Watermelon (97103) v2carwmbB0570
Carg27482Wax gourdcarwgoB0654