Carg27348 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27348
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WRKY transcription factor
Location	Cucurbita_argyrosperma_scaffold_525 : 22718 .. 24052 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGCTGGCCCTTCAACTCAGAACCCATCTCCACCCTTCTTCTTCCTCTTCCCCAGCAGAACCATGCTTCTTCTTGACTGAAATGATTCACTCTTCTTTCGAGAAAGCACTGTTGCTTCTGAAATTCAACTCTTCTAGTTCAATAATGCCAGATCCGACAACCCATAAAATTGCTTCGGTGGAAGAAGAAGGAGAAGGAGAACCCCGCAAGAACAAGAGGAAGAACAGTAGAGATGTGTTGAAGAGGAGGTAAATAAAATTTTGAGTTCCAACTTTTTGTTCTTTGTTCTTTGTTCTTTGTTATTTGTTATTTGGATTTGGAGATAAATCCTTTTTATCTTTACAGAAAATTACTGCCTAAATGGACAGAGGAAATTAAGATTTGCAGAGGAACTGCCCCTGAAGGTCCTCTCAACGATGGTTATAGTTGGAGAAAGTATGGCCAAAAAGATATCCATGGTGCTAATTTCCCAAGGTAAATAATAATAAATAAATCTTGGGTTAATTTTTGGCATTAATGGGTATTTAGGGTTCATTTGATTAATAACAACTTGGGATTTAGTTGCGGATTAGCATTATTTCCACATGTTTGAAGAATAGTCAACCAACTTAATTGGGTGAAGAAAGAAAAGTCAACCAACCCAATTGGGTGATGCAAGTGGAGAACATGTTGATATTATAAATATGAATAAAATGGTTTCATTTATGTAATTTTTTGGGTAATTTTGAAATGTGCAGATGTTACTACAGATGTAGTCATAGACATGAACGAGGATGTTTGGCGACAAAACAAGTTCAAAGATCCGACAATGATCCAAACATTTTCGACGTAACCTACAGAGGACGACACACATGTAACCAATCCACTAATAATTTGGGGTTGGTTTCTGGTTCACCTCAAAATGAAATCTCTGGAGATCAAGGAACCGGTCAGAATCAGCAGCGGAACCCGAATTCCGAAATTTTGTTCAATTTCGGTGTTAAATCGGAGGATTTTGACGATGTTTTTCCGCCCATTTCCTTTCTCTCCTCCCCCATGATGGACCTGCCTTTTTTTGCCGACGGCGGCTTGTCTGCAGCGCCAGTTTCATCAGCCACGTCGGAGGAGACGGCCTGGGACTGGAGCGGCTACCACGGCGGAGGGATTCAGATGGTTCAATCGTCGGAGCAATCGGACATGATTTCCGCGACTACTTCAGTGACCAATTCGCCGATTTGTAACGAGGATTGGGATTTCGATTTTGACCAGAATTTCCCCTTTGACTCTCTAGATTTCATCTCTTCATGA

mRNA sequence

ATGGAAATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGCTGGCCCTTCAACTCAGAACCCATCTCCACCCTTCTTCTTCCTCTTCCCCAGCAGAACCATGCTTCTTCTTGACTGAAATGATTCACTCTTCTTTCGAGAAAGCACTGTTGCTTCTGAAATTCAACTCTTCTAGTTCAATAATGCCAGATCCGACAACCCATAAAATTGCTTCGGTGGAAGAAGAAGGAGAAGGAGAACCCCGCAAGAACAAGAGGAAGAACAGTAGAGATGTGTTGAAGAGGAGAAAATTACTGCCTAAATGGACAGAGGAAATTAAGATTTGCAGAGGAACTGCCCCTGAAGGTCCTCTCAACGATGGTTATAGTTGGAGAAAGTATGGCCAAAAAGATATCCATGGTGCTAATTTCCCAAGATGTTACTACAGATGTAGTCATAGACATGAACGAGGATGTTTGGCGACAAAACAAGTTCAAAGATCCGACAATGATCCAAACATTTTCGACGTAACCTACAGAGGACGACACACATGTAACCAATCCACTAATAATTTGGGGTTGGTTTCTGGTTCACCTCAAAATGAAATCTCTGGAGATCAAGGAACCGGTCAGAATCAGCAGCGGAACCCGAATTCCGAAATTTTGTTCAATTTCGGTGTTAAATCGGAGGATTTTGACGATGTTTTTCCGCCCATTTCCTTTCTCTCCTCCCCCATGATGGACCTGCCTTTTTTTGCCGACGGCGGCTTGTCTGCAGCGCCAGTTTCATCAGCCACGTCGGAGGAGACGGCCTGGGACTGGAGCGGCTACCACGGCGGAGGGATTCAGATGGTTCAATCGTCGGAGCAATCGGACATGATTTCCGCGACTACTTCAGTGACCAATTCGCCGATTTGTAACGAGGATTGGGATTTCGATTTTGACCAGAATTTCCCCTTTGACTCTCTAGATTTCATCTCTTCATGA

Coding sequence (CDS)

ATGGAAATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGCTGGCCCTTCAACTCAGAACCCATCTCCACCCTTCTTCTTCCTCTTCCCCAGCAGAACCATGCTTCTTCTTGACTGAAATGATTCACTCTTCTTTCGAGAAAGCACTGTTGCTTCTGAAATTCAACTCTTCTAGTTCAATAATGCCAGATCCGACAACCCATAAAATTGCTTCGGTGGAAGAAGAAGGAGAAGGAGAACCCCGCAAGAACAAGAGGAAGAACAGTAGAGATGTGTTGAAGAGGAGAAAATTACTGCCTAAATGGACAGAGGAAATTAAGATTTGCAGAGGAACTGCCCCTGAAGGTCCTCTCAACGATGGTTATAGTTGGAGAAAGTATGGCCAAAAAGATATCCATGGTGCTAATTTCCCAAGATGTTACTACAGATGTAGTCATAGACATGAACGAGGATGTTTGGCGACAAAACAAGTTCAAAGATCCGACAATGATCCAAACATTTTCGACGTAACCTACAGAGGACGACACACATGTAACCAATCCACTAATAATTTGGGGTTGGTTTCTGGTTCACCTCAAAATGAAATCTCTGGAGATCAAGGAACCGGTCAGAATCAGCAGCGGAACCCGAATTCCGAAATTTTGTTCAATTTCGGTGTTAAATCGGAGGATTTTGACGATGTTTTTCCGCCCATTTCCTTTCTCTCCTCCCCCATGATGGACCTGCCTTTTTTTGCCGACGGCGGCTTGTCTGCAGCGCCAGTTTCATCAGCCACGTCGGAGGAGACGGCCTGGGACTGGAGCGGCTACCACGGCGGAGGGATTCAGATGGTTCAATCGTCGGAGCAATCGGACATGATTTCCGCGACTACTTCAGTGACCAATTCGCCGATTTGTAACGAGGATTGGGATTTCGATTTTGACCAGAATTTCCCCTTTGACTCTCTAGATTTCATCTCTTCATGA

Protein sequence

MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNSSSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPISFLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSVTNSPICNEDWDFDFDQNFPFDSLDFISS

Homology

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BLAST of Carg27348 vs. NCBI nr
Match: XP_022924267.1 (probable WRKY transcription factor 41 [Cucurbita moschata])

HSP 1 Score: 657.1 bits (1694), Expect = 3.0e-185
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS
Sbjct: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60

Query: 61  SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPEGP 120
           SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPEGP
Sbjct: 61  SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPEGP 120

Query: 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT 180
           LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT
Sbjct: 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT 180

Query: 181 CNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPISFLSS 240
           CNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPISFLSS
Sbjct: 181 CNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPISFLSS 240

Query: 241 PMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSVTNSP 300
           PMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSVTNSP
Sbjct: 241 PMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSVTNSP 300

Query: 301 ICNEDWDFDFDQNFPFDSLDFISS 325
           ICNEDWDFDFDQNFPFDSLDFISS
Sbjct: 301 ICNEDWDFDFDQNFPFDSLDFISS 324

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BLAST of Carg27348 vs. NCBI nr
Match: XP_023526723.1 (probable WRKY transcription factor 41 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.5 bits (1399), Expect = 4.9e-151
Identity = 278/328 (84.76%), Postives = 279/328 (85.06%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKAL----LLL 60
           MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMI SSFEKAL       
Sbjct: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIQSSFEKALXXXXXXX 60

Query: 61  KFNSSSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTA 120
                                                 VLKRRKLLPKWTEEIKICRGTA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKRRKLLPKWTEEIKICRGTA 120

Query: 121 PEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYR 180
           PEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYR
Sbjct: 121 PEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYR 180

Query: 181 GRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPIS 240
           GRHTCNQSTNNLGLVSGSP+NEISGDQ TGQ QQRNPNSEI FNFGVKSEDFDDVFPPIS
Sbjct: 181 GRHTCNQSTNNLGLVSGSPRNEISGDQETGQTQQRNPNSEIFFNFGVKSEDFDDVFPPIS 240

Query: 241 FLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSV 300
           FLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSV
Sbjct: 241 FLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSV 300

Query: 301 TNSPICNEDWDFDFDQNFPFDSLDFISS 325
           TNSPICNEDWDFDFDQNFPFDSLDFISS
Sbjct: 301 TNSPICNEDWDFDFDQNFPFDSLDFISS 328

[Close]

BLAST of Carg27348 vs. NCBI nr
Match: XP_022979640.1 (probable WRKY transcription factor 41 [Cucurbita maxima])

HSP 1 Score: 523.1 bits (1346), Expect = 6.8e-145
Identity = 268/324 (82.72%), Postives = 269/324 (83.02%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           MEMEHKSLITELTQGKELALQLRT+LHPSSSSSPAEPCFFLTE I SSFEKALL      
Sbjct: 1   MEMEHKSLITELTQGKELALQLRTYLHPSSSSSPAEPCFFLTERIQSSFEKALLXXXXXX 60

Query: 61  SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPEGP 120
                                                  KLLPKWTEEIKICRGTAPEGP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLPKWTEEIKICRGTAPEGP 120

Query: 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT 180
           LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT
Sbjct: 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRHT 180

Query: 181 CNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFGVKSEDFDDVFPPISFLSS 240
           CNQSTNNLGLVSGS QNEISGDQ TGQNQQRNPNSEI FNFGVKSEDFDDVFPPISFLSS
Sbjct: 181 CNQSTNNLGLVSGSLQNEISGDQETGQNQQRNPNSEIWFNFGVKSEDFDDVFPPISFLSS 240

Query: 241 PMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQSSEQSDMISATTSVTNSP 300
           P MDLP  ADGGLSAAPVSSATSEETAWDWSGYHGGGI MV SSEQSDMISATTSVTNSP
Sbjct: 241 PTMDLPLLADGGLSAAPVSSATSEETAWDWSGYHGGGILMVPSSEQSDMISATTSVTNSP 300

Query: 301 ICNEDWDFDFDQNFPFDSLDFISS 325
           ICNEDWDFDFDQNFPFDSLDFISS
Sbjct: 301 ICNEDWDFDFDQNFPFDSLDFISS 324

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BLAST of Carg27348 vs. NCBI nr
Match: XP_008437915.1 (PREDICTED: probable WRKY transcription factor 46 [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 1.5e-104
Identity = 224/349 (64.18%), Postives = 251/349 (71.92%), Query Frame = 0


Query: 3   MEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNSSS 62
           MEH SLI+ELTQGKELALQLRTH HP  SSSP + C FLTEMI SSFEKALLLL FNSS+
Sbjct: 4   MEHNSLISELTQGKELALQLRTHFHP--SSSPEQACLFLTEMIQSSFEKALLLLNFNSSN 63

Query: 63  SIMPDPTTHKIASVEEEGEGEPRKNKR---------------KNSRDVLKRRKLLPKWTE 122
           S      TH+IA ++                             SRDVLK+RKLLP+WTE
Sbjct: 64  S-----KTHQIALLDXXXXXXXXXXXXXXXXXXXXXXXXXXISRSRDVLKKRKLLPRWTE 123

Query: 123 EIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDND 182
           EIK+C GTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRC+HR+ RGCLATKQVQ+SDND
Sbjct: 124 EIKVCNGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCTHRNVRGCLATKQVQKSDND 183

Query: 183 PNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFG----- 242
           PNIF+VTYRGRHTCNQS+N     S S QN+I   + T Q  Q NPNSEI F+FG     
Sbjct: 184 PNIFEVTYRGRHTCNQSSNLGSTSSISSQNQIY--EETNQIHQ-NPNSEIWFDFGDNNFN 243

Query: 243 VKSEDFDDVFPPISFLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQ 302
           +K+EDF+ V  P SF   P+MD  F    GL+AA VSS  S +TAWDWSGY  GG+Q VQ
Sbjct: 244 LKTEDFNQVLSPFSFSYEPIMDPTFIPGEGLTAAAVSSPAS-DTAWDWSGY-DGGLQRVQ 303

Query: 303 SSEQS---DMISATTSVTNSPICNEDWDF-----DFDQNFPFDSLDFIS 324
           SSEQS   ++ISATTSVTNSPIC  +WDF     DFDQNFPFDSLDFIS
Sbjct: 304 SSEQSAVTEIISATTSVTNSPICIGEWDFSLDNIDFDQNFPFDSLDFIS 340

[Close]

BLAST of Carg27348 vs. NCBI nr
Match: XP_011650695.1 (PREDICTED: probable WRKY transcription factor 46 [Cucumis sativus] >KGN56437.1 hypothetical protein Csa_3G119700 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 223/348 (64.08%), Postives = 253/348 (72.70%), Query Frame = 0


Query: 3   MEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNSSS 62
           MEH SLI+ELTQGKELALQLRTHLHP  SSSP + C FLTEMI SSFEKALLLL FNSS+
Sbjct: 4   MEHNSLISELTQGKELALQLRTHLHP--SSSPEQACLFLTEMIQSSFEKALLLLNFNSSN 63

Query: 63  SIMPDPTTHKIASVE-------------EEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEI 122
                  TH+I+S++                           SRD LK+RKLLP+WTEEI
Sbjct: 64  L-----KTHQISSLDXXXXXXXXXXXXXXXXXXXXXXXXXSRSRDALKKRKLLPRWTEEI 123

Query: 123 KICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPN 182
           K+C G+APEGPLNDGYSWRKYGQKDIHGANFPRCYYRC+HR+ RGCLATKQVQ+SDNDPN
Sbjct: 124 KVCNGSAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCTHRNVRGCLATKQVQKSDNDPN 183

Query: 183 IFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFG-----VK 242
           IF+VTYRGRHTCNQS +NLG  S S QN+I   + T Q QQ+ PNSEI F+FG     +K
Sbjct: 184 IFEVTYRGRHTCNQS-SNLGSTSISSQNQIY--EETNQIQQK-PNSEIWFDFGDNNFNLK 243

Query: 243 SEDFDDVFPPISF-LSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQS 302
           +EDFD VFPP SF    P+M+  F     L+AA  S AT  +TAWDWSGY  GG+Q VQS
Sbjct: 244 TEDFDQVFPPFSFSYEEPIMNPTFIPGEDLTAAVSSPAT--DTAWDWSGY-DGGVQRVQS 303

Query: 303 SEQS---DMISATTSVTNSPICNEDWDF-----DFDQNFPFDSLDFIS 324
           SEQS   +++SATTSVTNSPI N DWDF     DFD NFPFDSLDFIS
Sbjct: 304 SEQSAVTEIVSATTSVTNSPIYNGDWDFSLDNIDFDHNFPFDSLDFIS 337

[Close]

BLAST of Carg27348 vs. TAIR10
Match: AT4G23810.1 (WRKY family transcription factor)

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-36
Identity = 104/284 (36.62%), Postives = 154/284 (54.23%), Query Frame = 0


Query: 1   MEMEHKSLITELTQG----KELALQLRTHLHPSSS-SSP----AEPCFFLTEMIHSSFEK 60
           +  E K+L++EL  G    K+L  +LR    PSSS SSP    AE    L + I SS+E+
Sbjct: 7   LSWEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYER 66

Query: 61  ALLLLKFNSSSSIMPDPTTHKIASVEEEG---------EGEPR---------KNKRKNSR 120
           +LLLL ++SS S+   PT   +  V   G          G PR          ++  + +
Sbjct: 67  SLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPESPASINGSPRSEEFADGGGSSESHHRQ 126

Query: 121 DVL---KRRKLLPKWTEEIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHR 180
           D +   K+RK+LPKW+E+++I      EGP +D +SWRKYGQKDI GA FPR YYRC+HR
Sbjct: 127 DYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHR 186

Query: 181 HERGCLATKQVQRSDNDPNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQ 240
             + C ATKQVQRSD D  +F+VTYRG HTC+Q+      ++   + + +  +     + 
Sbjct: 187 STQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKP 246

Query: 241 RNPNSEILFNFGVKSEDFDDVFPPISFLSSPMMDLPFFADGGLS 255
           ++    +  N  V+++  DD     SF  +P    PF+  G ++
Sbjct: 247 KDILESLKSNLTVRTDGLDDGKDVFSFPDTP----PFYNYGTIN 286

[Close]

BLAST of Carg27348 vs. TAIR10
Match: AT4G11070.1 (WRKY family transcription factor)

HSP 1 Score: 148.7 bits (374), Expect = 6.3e-36
Identity = 123/336 (36.61%), Postives = 163/336 (48.51%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEM-------IHSSFEKAL 60
           M  E +SL+ EL  G + A QL+    PS S+S +   +  TE+       I SSF+KA+
Sbjct: 4   MNWERRSLLNELIHGLKAAKQLQGSSSPSLSASSS---YLTTEIKENLLHNIVSSFKKAI 63

Query: 61  LLL-----KFNSSSSIMPDPTTH--KIASVEEEGEGEPRKNKRKNSRD-----VLKRRKL 120
           L+L     + N +  + PDP  H  K+        G PR  +  N R        K+RK+
Sbjct: 64  LMLNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKM 123

Query: 121 LPKWTEEIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQV 180
           LPKWTE+++I      EGP +D +SWRKYGQKDI GA FPR YYRC+ R+ + C ATKQV
Sbjct: 124 LPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQV 183

Query: 181 QRSDNDPNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNF 240
           QRSD DP IF+VTYRG HTC+Q       +    + E         N Q    S  +   
Sbjct: 184 QRSDGDPTIFEVTYRGTHTCSQG------IPLPEKRETKPKHTVAVNYQNLRASLTVRTG 243

Query: 241 GVKSEDFDDVFPPISFLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMV 300
           G+ SE F   FP    ++SP+        GG                  + YH  G    
Sbjct: 244 GLGSEAFS--FP----VTSPLYTYESINGGG------------------TFYHHVGSS-- 296

Query: 301 QSSEQSDMISATTSVTNSPICNEDWDFDFDQNFPFD 318
             S+ + +IS  TS  +SPI        FD NF FD
Sbjct: 304 GPSDFTGLISTNTSTGSSPI--------FDVNFQFD 296

[Close]

BLAST of Carg27348 vs. TAIR10
Match: AT2G46400.1 (WRKY DNA-binding protein 46)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           M ME K +I EL  GKELA +L  +L  +SS    +    L   I   ++ A+ +L FN 
Sbjct: 1   MMMEEKLVINELELGKELANRLMNNLKHTSSVDSNKT---LISDILRIYQNAIFMLSFNQ 60

Query: 61  SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPE-G 120
             +I+         S+E +G         K+S++V K+RK+  K TE++K+   T  E G
Sbjct: 61  DKNILK-------RSLEIDG---------KDSKNVFKKRKVSEKNTEKVKVFVATEQENG 120

Query: 121 PLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRH 180
            ++DG+ WRKYGQK+IHG+  PR YYRC+HR  + CLA KQVQ+SD DP++F+V Y G H
Sbjct: 121 SIDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNH 168

Query: 181 TCNQSTN 187
           TCN  T+
Sbjct: 181 TCNNITS 168

[Close]

BLAST of Carg27348 vs. TAIR10
Match: AT5G24110.1 (WRKY DNA-binding protein 30)

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-27
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGK--ELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKF 60
           ME  H S   E  + +  EL ++ R + H   S+S  E    L + I  S+ K+L ++ +
Sbjct: 1   MEKNHSSGEWEKMKNEINELMIEGRDYAHQFGSASSQETREHLAKKILQSYHKSLTIMNY 60

Query: 61  NSSSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLK-RRKLLPKWTEEIKICRGTAP 120
           +     +             +G G P+ +       V+K  +K +P+W+ +++I  G   
Sbjct: 61  SGELDQV------------SQGGGSPKSDDSDQEPLVIKSSKKSMPRWSSKVRIAPGAGV 120

Query: 121 EGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRG 180
           +  L+DG+SWRKYGQKDI GA FPR YYRC++R  +GC ATKQVQRSD +  + +++YRG
Sbjct: 121 DRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRG 177

Query: 181 RHTCNQSTN 187
            H+C+Q+ N
Sbjct: 181 IHSCSQAAN 177

[Close]

BLAST of Carg27348 vs. TAIR10
Match: AT3G56400.1 (WRKY DNA-binding protein 70)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-19
Identity = 63/185 (34.05%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 8   LITELTQGKELALQLRTHLHPSSSS-----SPAEPCFFLTEMIHSSFEKALLLLKFNSSS 67
           ++ +L +G +L  QL+  L    S      +    CF  T  +  +FE        +SSS
Sbjct: 11  VMNQLVEGHDLTTQLQQLLSQPGSGLEDLVAKILVCFNNTISVLDTFE------PISSSS 70

Query: 68  SI-----MPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAP 127
           S+       + +       E+ G+   R    K  R   KR+K     T E  I      
Sbjct: 71  SLAAVEGSQNASCDNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTI------ 130

Query: 128 EGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRG 183
              L D +SWRKYGQK+I  A FPR Y+RC+H++ +GC ATKQVQ+ + +P +F +TY G
Sbjct: 131 ---LEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIG 180

[Close]

BLAST of Carg27348 vs. Swiss-Prot
Match: sp|Q9SUP6|WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.7e-35
Identity = 104/284 (36.62%), Postives = 154/284 (54.23%), Query Frame = 0


Query: 1   MEMEHKSLITELTQG----KELALQLRTHLHPSSS-SSP----AEPCFFLTEMIHSSFEK 60
           +  E K+L++EL  G    K+L  +LR    PSSS SSP    AE    L + I SS+E+
Sbjct: 7   LSWEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYER 66

Query: 61  ALLLLKFNSSSSIMPDPTTHKIASVEEEG---------EGEPR---------KNKRKNSR 120
           +LLLL ++SS S+   PT   +  V   G          G PR          ++  + +
Sbjct: 67  SLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPESPASINGSPRSEEFADGGGSSESHHRQ 126

Query: 121 DVL---KRRKLLPKWTEEIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHR 180
           D +   K+RK+LPKW+E+++I      EGP +D +SWRKYGQKDI GA FPR YYRC+HR
Sbjct: 127 DYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHR 186

Query: 181 HERGCLATKQVQRSDNDPNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQ 240
             + C ATKQVQRSD D  +F+VTYRG HTC+Q+      ++   + + +  +     + 
Sbjct: 187 STQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKP 246

Query: 241 RNPNSEILFNFGVKSEDFDDVFPPISFLSSPMMDLPFFADGGLS 255
           ++    +  N  V+++  DD     SF  +P    PF+  G ++
Sbjct: 247 KDILESLKSNLTVRTDGLDDGKDVFSFPDTP----PFYNYGTIN 286

[Close]

BLAST of Carg27348 vs. Swiss-Prot
Match: sp|Q8H0Y8|WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana OX=3702 GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34
Identity = 123/336 (36.61%), Postives = 163/336 (48.51%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEM-------IHSSFEKAL 60
           M  E +SL+ EL  G + A QL+    PS S+S +   +  TE+       I SSF+KA+
Sbjct: 4   MNWERRSLLNELIHGLKAAKQLQGSSSPSLSASSS---YLTTEIKENLLHNIVSSFKKAI 63

Query: 61  LLL-----KFNSSSSIMPDPTTH--KIASVEEEGEGEPRKNKRKNSRD-----VLKRRKL 120
           L+L     + N +  + PDP  H  K+        G PR  +  N R        K+RK+
Sbjct: 64  LMLNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKM 123

Query: 121 LPKWTEEIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQV 180
           LPKWTE+++I      EGP +D +SWRKYGQKDI GA FPR YYRC+ R+ + C ATKQV
Sbjct: 124 LPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQV 183

Query: 181 QRSDNDPNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNF 240
           QRSD DP IF+VTYRG HTC+Q       +    + E         N Q    S  +   
Sbjct: 184 QRSDGDPTIFEVTYRGTHTCSQG------IPLPEKRETKPKHTVAVNYQNLRASLTVRTG 243

Query: 241 GVKSEDFDDVFPPISFLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMV 300
           G+ SE F   FP    ++SP+        GG                  + YH  G    
Sbjct: 244 GLGSEAFS--FP----VTSPLYTYESINGGG------------------TFYHHVGSS-- 296

Query: 301 QSSEQSDMISATTSVTNSPICNEDWDFDFDQNFPFD 318
             S+ + +IS  TS  +SPI        FD NF FD
Sbjct: 304 GPSDFTGLISTNTSTGSSPI--------FDVNFQFD 296

[Close]

BLAST of Carg27348 vs. Swiss-Prot
Match: sp|Q9SKD9|WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana OX=3702 GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30
Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           M ME K +I EL  GKELA +L  +L  +SS    +    L   I   ++ A+ +L FN 
Sbjct: 1   MMMEEKLVINELELGKELANRLMNNLKHTSSVDSNKT---LISDILRIYQNAIFMLSFNQ 60

Query: 61  SSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAPE-G 120
             +I+         S+E +G         K+S++V K+RK+  K TE++K+   T  E G
Sbjct: 61  DKNILK-------RSLEIDG---------KDSKNVFKKRKVSEKNTEKVKVFVATEQENG 120

Query: 121 PLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRGRH 180
            ++DG+ WRKYGQK+IHG+  PR YYRC+HR  + CLA KQVQ+SD DP++F+V Y G H
Sbjct: 121 SIDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNH 168

Query: 181 TCNQSTN 187
           TCN  T+
Sbjct: 181 TCNNITS 168

[Close]

BLAST of Carg27348 vs. Swiss-Prot
Match: sp|Q9FL62|WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana OX=3702 GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-26
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGK--ELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKF 60
           ME  H S   E  + +  EL ++ R + H   S+S  E    L + I  S+ K+L ++ +
Sbjct: 1   MEKNHSSGEWEKMKNEINELMIEGRDYAHQFGSASSQETREHLAKKILQSYHKSLTIMNY 60

Query: 61  NSSSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLK-RRKLLPKWTEEIKICRGTAP 120
           +     +             +G G P+ +       V+K  +K +P+W+ +++I  G   
Sbjct: 61  SGELDQV------------SQGGGSPKSDDSDQEPLVIKSSKKSMPRWSSKVRIAPGAGV 120

Query: 121 EGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRG 180
           +  L+DG+SWRKYGQKDI GA FPR YYRC++R  +GC ATKQVQRSD +  + +++YRG
Sbjct: 121 DRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRG 177

Query: 181 RHTCNQSTN 187
            H+C+Q+ N
Sbjct: 181 IHSCSQAAN 177

[Close]

BLAST of Carg27348 vs. Swiss-Prot
Match: sp|Q9LY00|WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana OX=3702 GN=WRKY70 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-18
Identity = 63/185 (34.05%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 8   LITELTQGKELALQLRTHLHPSSSS-----SPAEPCFFLTEMIHSSFEKALLLLKFNSSS 67
           ++ +L +G +L  QL+  L    S      +    CF  T  +  +FE        +SSS
Sbjct: 11  VMNQLVEGHDLTTQLQQLLSQPGSGLEDLVAKILVCFNNTISVLDTFE------PISSSS 70

Query: 68  SI-----MPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRGTAP 127
           S+       + +       E+ G+   R    K  R   KR+K     T E  I      
Sbjct: 71  SLAAVEGSQNASCDNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTI------ 130

Query: 128 EGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVTYRG 183
              L D +SWRKYGQK+I  A FPR Y+RC+H++ +GC ATKQVQ+ + +P +F +TY G
Sbjct: 131 ---LEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIG 180

[Close]

BLAST of Carg27348 vs. TrEMBL
Match: tr|A0A1S3AVR5|A0A1S3AVR5_CUCME (probable WRKY transcription factor 46 OS=Cucumis melo OX=3656 GN=LOC103483201 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.0e-104
Identity = 224/349 (64.18%), Postives = 251/349 (71.92%), Query Frame = 0


Query: 3   MEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNSSS 62
           MEH SLI+ELTQGKELALQLRTH HP  SSSP + C FLTEMI SSFEKALLLL FNSS+
Sbjct: 4   MEHNSLISELTQGKELALQLRTHFHP--SSSPEQACLFLTEMIQSSFEKALLLLNFNSSN 63

Query: 63  SIMPDPTTHKIASVEEEGEGEPRKNKR---------------KNSRDVLKRRKLLPKWTE 122
           S      TH+IA ++                             SRDVLK+RKLLP+WTE
Sbjct: 64  S-----KTHQIALLDXXXXXXXXXXXXXXXXXXXXXXXXXXISRSRDVLKKRKLLPRWTE 123

Query: 123 EIKICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDND 182
           EIK+C GTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRC+HR+ RGCLATKQVQ+SDND
Sbjct: 124 EIKVCNGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCTHRNVRGCLATKQVQKSDND 183

Query: 183 PNIFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFG----- 242
           PNIF+VTYRGRHTCNQS+N     S S QN+I   + T Q  Q NPNSEI F+FG     
Sbjct: 184 PNIFEVTYRGRHTCNQSSNLGSTSSISSQNQIY--EETNQIHQ-NPNSEIWFDFGDNNFN 243

Query: 243 VKSEDFDDVFPPISFLSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQ 302
           +K+EDF+ V  P SF   P+MD  F    GL+AA VSS  S +TAWDWSGY  GG+Q VQ
Sbjct: 244 LKTEDFNQVLSPFSFSYEPIMDPTFIPGEGLTAAAVSSPAS-DTAWDWSGY-DGGLQRVQ 303

Query: 303 SSEQS---DMISATTSVTNSPICNEDWDF-----DFDQNFPFDSLDFIS 324
           SSEQS   ++ISATTSVTNSPIC  +WDF     DFDQNFPFDSLDFIS
Sbjct: 304 SSEQSAVTEIISATTSVTNSPICIGEWDFSLDNIDFDQNFPFDSLDFIS 340

[Close]

BLAST of Carg27348 vs. TrEMBL
Match: tr|A0A0A0L772|A0A0A0L772_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119700 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 8.6e-104
Identity = 223/348 (64.08%), Postives = 253/348 (72.70%), Query Frame = 0


Query: 3   MEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNSSS 62
           MEH SLI+ELTQGKELALQLRTHLHP  SSSP + C FLTEMI SSFEKALLLL FNSS+
Sbjct: 4   MEHNSLISELTQGKELALQLRTHLHP--SSSPEQACLFLTEMIQSSFEKALLLLNFNSSN 63

Query: 63  SIMPDPTTHKIASVE-------------EEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEI 122
                  TH+I+S++                           SRD LK+RKLLP+WTEEI
Sbjct: 64  L-----KTHQISSLDXXXXXXXXXXXXXXXXXXXXXXXXXSRSRDALKKRKLLPRWTEEI 123

Query: 123 KICRGTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPN 182
           K+C G+APEGPLNDGYSWRKYGQKDIHGANFPRCYYRC+HR+ RGCLATKQVQ+SDNDPN
Sbjct: 124 KVCNGSAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCTHRNVRGCLATKQVQKSDNDPN 183

Query: 183 IFDVTYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNFG-----VK 242
           IF+VTYRGRHTCNQS +NLG  S S QN+I   + T Q QQ+ PNSEI F+FG     +K
Sbjct: 184 IFEVTYRGRHTCNQS-SNLGSTSISSQNQIY--EETNQIQQK-PNSEIWFDFGDNNFNLK 243

Query: 243 SEDFDDVFPPISF-LSSPMMDLPFFADGGLSAAPVSSATSEETAWDWSGYHGGGIQMVQS 302
           +EDFD VFPP SF    P+M+  F     L+AA  S AT  +TAWDWSGY  GG+Q VQS
Sbjct: 244 TEDFDQVFPPFSFSYEEPIMNPTFIPGEDLTAAVSSPAT--DTAWDWSGY-DGGVQRVQS 303

Query: 303 SEQS---DMISATTSVTNSPICNEDWDF-----DFDQNFPFDSLDFIS 324
           SEQS   +++SATTSVTNSPI N DWDF     DFD NFPFDSLDFIS
Sbjct: 304 SEQSAVTEIVSATTSVTNSPIYNGDWDFSLDNIDFDHNFPFDSLDFIS 337

[Close]

BLAST of Carg27348 vs. TrEMBL
Match: tr|A0A2N9J396|A0A2N9J396_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59848 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 174/362 (48.07%), Postives = 225/362 (62.15%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFN- 60
           M+ E K+LI+EL QGKELA QL  HL PSSS    E   FL E I SS+EKAL ++ ++ 
Sbjct: 1   MDCEQKTLISELNQGKELAKQLMNHLDPSSSPETRE---FLIEKILSSYEKALSMMNWSA 60

Query: 61  ------SSSSIMPDPTTHKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICR 120
                 SS +I+  P    I+S   EG  +  K+K     DV K+RK LP+WTE++++C 
Sbjct: 61  CVGEPKSSINILESPCNFAISSPRSEGYDQDSKHK----NDVYKKRKTLPRWTEQVRVCS 120

Query: 121 GTAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDV 180
           GT  EGPL+DGYSWRKYGQKDI GANFPR YYRC+HRH +GCLATKQVQ+SD DP IF+V
Sbjct: 121 GTGLEGPLDDGYSWRKYGQKDILGANFPRGYYRCTHRHAQGCLATKQVQKSDEDPTIFEV 180

Query: 181 TYRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQRNPNSEILFNF--GVKSEDF--- 240
           TYRGRHTC+Q+ ++L + S S  +E S +       Q+ P+ E++FNF  G+KSED    
Sbjct: 181 TYRGRHTCSQA-SHLAVASASVASERSKENKNHYQPQKLPSQELVFNFGGGLKSEDLETR 240

Query: 241 -DDVFPPISFLSSP--------------MMDLPFFADGGLSAAPVSSATSEETAWDWSGY 300
            DD+FP  SF S+P              M++L     G  S   +S ATSE   +  S  
Sbjct: 241 EDDIFPSFSFPSTPIGFQNADNNIFSETMLELENNFMGSFSPTFISPATSESNLFPMSPC 300

Query: 301 H----GGGIQMVQSSEQ---SDMISATTSVTNSPICNEDWDF-----DFDQNFPFDSLDF 324
           H    G G+ +VQ+SE    +++ISA TSVTNSPI N  WDF     + D NFPFD+ +F
Sbjct: 301 HMNNYGLGL-IVQTSESDLTAEIISAPTSVTNSPIGN--WDFSLDKVEIDPNFPFDNPEF 351

[Close]

BLAST of Carg27348 vs. TrEMBL
Match: tr|A0A1X9J2Q3|A0A1X9J2Q3_POPTO (WRKY transcription factor 6 OS=Populus tomentosa OX=118781 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.0e-68
Identity = 176/371 (47.44%), Postives = 220/371 (59.30%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           ME EHK+LI+EL+QGKELA QL  HL+PSSS    +   FL + I SS+EKAL LL + +
Sbjct: 5   MEWEHKTLISELSQGKELAKQLSNHLNPSSSLEARQ---FLVDKILSSYEKALSLLNWGA 64

Query: 61  SSSIMPDPT------THKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRG 120
                P PT       H  A+     E   +  K + ++DV K+RK+ P+WTE++K+C G
Sbjct: 65  LVDQQPKPTIGTVEPLHSFANSSPRSEVSDQDCKEECNKDVYKKRKIQPRWTEQVKVCSG 124

Query: 121 TAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVT 180
           T  EGPL+DGYSWRKYGQKDI GANFPR YYRC+HRH +GCLATKQVQRSD D +IF+VT
Sbjct: 125 TGLEGPLDDGYSWRKYGQKDILGANFPRGYYRCTHRHSQGCLATKQVQRSDEDHSIFEVT 184

Query: 181 YRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQR----------NPNSEILFNFG-- 240
           YRGRHTCNQ++ +  L S SP+N+ S      + QQ+           P  EI  NFG  
Sbjct: 185 YRGRHTCNQASPS-PLASPSPKNDCSKQSKYHRKQQQQLQLLREEKPKPTEEISVNFGSD 244

Query: 241 ---VKSEDF---DDVFPPISF--------------LSSPMMDLPFFADGGLSAAPVSSAT 300
              VKSED    DD+FPP SF               +  MM+  F   G  S A +S AT
Sbjct: 245 FVQVKSEDLGSKDDIFPPFSFPCTSLGNENEENNIFTESMMENSFL--GSFSPAFISPAT 304

Query: 301 SEETAWDWSGYH----GGGIQMVQSSEQ---SDMISATTSVTNSPICNEDW---DFDFDQ 324
           SE   +  S  H    G G   VQ+ E    S++ISA TSVTNSPI + D    + DFD 
Sbjct: 305 SESNYFSMSPCHMNSFGIGYPNVQTPESELTSEIISAPTSVTNSPIGDFDISIDNVDFDT 364

[Close]

BLAST of Carg27348 vs. TrEMBL
Match: tr|C9DHZ5|C9DHZ5_9ROSI (WRKY transcription factor 6 OS=(Populus tomentosa x Populus bolleana) x Populus tomentosa OX=418444 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-67
Identity = 173/371 (46.63%), Postives = 221/371 (59.57%), Query Frame = 0


Query: 1   MEMEHKSLITELTQGKELALQLRTHLHPSSSSSPAEPCFFLTEMIHSSFEKALLLLKFNS 60
           ME EHK+LI+EL+QGKELA QL  HL+PSSS    +   FL + I SS+EKAL LL + +
Sbjct: 5   MEWEHKTLISELSQGKELAKQLSNHLNPSSSLEARQ---FLVDKILSSYEKALSLLNWGA 64

Query: 61  SSSIMPDPT------THKIASVEEEGEGEPRKNKRKNSRDVLKRRKLLPKWTEEIKICRG 120
                P PT       H +A+     E   +  K + ++DV K+RK+ P+WTE++K+C G
Sbjct: 65  LVDQQPKPTIGTVEPLHSLANSSPRSEVSDQDCKEECNKDVYKKRKIQPRWTEQVKVCSG 124

Query: 121 TAPEGPLNDGYSWRKYGQKDIHGANFPRCYYRCSHRHERGCLATKQVQRSDNDPNIFDVT 180
           T  EGPL+DGYSWRKYGQKDI GANFPR YYRC+HRH +GCLATKQVQRSD D +IF+VT
Sbjct: 125 TGLEGPLDDGYSWRKYGQKDILGANFPRGYYRCTHRHSQGCLATKQVQRSDEDHSIFEVT 184

Query: 181 YRGRHTCNQSTNNLGLVSGSPQNEISGDQGTGQNQQR----------NPNSEILFNFG-- 240
           Y+GRHTCNQ++ +  L S SP+N+ S      + QQ+           P  EI  NFG  
Sbjct: 185 YQGRHTCNQASPS-PLASPSPKNDCSKQSKYHRKQQQQLQLLREEKPKPTEEISVNFGSD 244

Query: 241 ---VKSEDF---DDVFPPISF--------------LSSPMMDLPFFADGGLSAAPVSSAT 300
              VK+ED    DD+FPP SF               +  MM+  F   G  S A +S AT
Sbjct: 245 FVQVKNEDLGSKDDIFPPFSFPCTSLGNENEENNIFTESMMENSFL--GSFSPAFISPAT 304

Query: 301 SEETAWDWSGYH----GGGIQMVQSSEQ---SDMISATTSVTNSPICNEDW---DFDFDQ 324
           SE   +  S  H    G G   VQ+ E    +++ISA TSVTNSPI + D    + DFD 
Sbjct: 305 SESNYFSMSPCHMNSFGIGYPNVQTPESELTTEIISAPTSVTNSPIGDFDISIDNVDFDT 364

The following BLAST results are available for this feature:

BLAST of Carg27348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924267.1	3.0e-185	100.00	probable WRKY transcription factor 41 [Cucurbita moschata]	[more]
XP_023526723.1	4.9e-151	84.76	probable WRKY transcription factor 41 [Cucurbita pepo subsp. pepo]	[more]
XP_022979640.1	6.8e-145	82.72	probable WRKY transcription factor 41 [Cucurbita maxima]	[more]
XP_008437915.1	1.5e-104	64.18	PREDICTED: probable WRKY transcription factor 46 [Cucumis melo]	[more]
XP_011650695.1	1.3e-103	64.08	PREDICTED: probable WRKY transcription factor 46 [Cucumis sativus] >KGN56437.1 h...	[more]

BLAST of Carg27348 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23810.1	3.7e-36	36.62	WRKY family transcription factor	[more]
AT4G11070.1	6.3e-36	36.61	WRKY family transcription factor	[more]
AT2G46400.1	1.2e-31	42.25	WRKY DNA-binding protein 46	[more]
AT5G24110.1	3.1e-27	35.98	WRKY DNA-binding protein 30	[more]
AT3G56400.1	1.8e-19	34.05	WRKY DNA-binding protein 70	[more]

BLAST of Carg27348 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUP6\|WRK53_ARATH	6.7e-35	36.62	Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 ...	[more]
sp\|Q8H0Y8\|WRK41_ARATH	1.1e-34	36.61	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana OX=3702 GN=WRKY41 ...	[more]
sp\|Q9SKD9\|WRK46_ARATH	2.2e-30	42.25	Probable WRKY transcription factor 46 OS=Arabidopsis thaliana OX=3702 GN=WRKY46 ...	[more]
sp\|Q9FL62\|WRK30_ARATH	5.7e-26	35.98	Probable WRKY transcription factor 30 OS=Arabidopsis thaliana OX=3702 GN=WRKY30 ...	[more]
sp\|Q9LY00\|WRK70_ARATH	3.3e-18	34.05	Probable WRKY transcription factor 70 OS=Arabidopsis thaliana OX=3702 GN=WRKY70 ...	[more]

BLAST of Carg27348 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVR5\|A0A1S3AVR5_CUCME	1.0e-104	64.18	probable WRKY transcription factor 46 OS=Cucumis melo OX=3656 GN=LOC103483201 PE...	[more]
tr\|A0A0A0L772\|A0A0A0L772_CUCSA	8.6e-104	64.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119700 PE=4 SV=1	[more]
tr\|A0A2N9J396\|A0A2N9J396_FAGSY	1.4e-69	48.07	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59848 PE=4 SV=1	[more]
tr\|A0A1X9J2Q3\|A0A1X9J2Q3_POPTO	2.0e-68	47.44	WRKY transcription factor 6 OS=Populus tomentosa OX=118781 PE=2 SV=1	[more]
tr\|C9DHZ5\|C9DHZ5_9ROSI	1.7e-67	46.63	WRKY transcription factor 6 OS=(Populus tomentosa x Populus bolleana) x Populus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27348-RA	Carg27348-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 121..183 e-value: 5.4E-40 score: 148.9
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 122..181 e-value: 1.6E-26 score: 92.3
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 116..184 score: 23.101
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 109..185 e-value: 1.1E-27 score: 97.5
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 119..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..213
None	No IPR available	PANTHER	PTHR32096:SF20	WRKY TRANSCRIPTION FACTOR 46-RELATED	coord: 1..320
None	No IPR available	PANTHER	PTHR32096	FAMILY NOT NAMED	coord: 1..320

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27348	Cla021170	Watermelon (97103) v1	carwmB0205
Carg27348	Csa3G119700	Cucumber (Chinese Long) v2	carcuB0243
Carg27348	MELO3C006036	Melon (DHL92) v3.5.1	carmeB0222
Carg27348	ClCG05G000940	Watermelon (Charleston Gray)	carwcgB0211
Carg27348	CSPI03G08040	Wild cucumber (PI 183967)	carcpiB0248
Carg27348	Cucsa.259110	Cucumber (Gy14) v1	carcgyB0261
Carg27348	CmaCh14G020980	Cucurbita maxima (Rimu)	carcmaB0297
Carg27348	CmaCh06G010490	Cucurbita maxima (Rimu)	carcmaB0298
Carg27348	Lsi05G021100	Bottle gourd (USVL1VR-Ls)	carlsiB193
Carg27348	Cp4.1LG08g00890	Cucurbita pepo (Zucchini)	carcpeB0306
Carg27348	CsGy3G008200	Cucumber (Gy14) v2	carcgybB0232
Carg27348	MELO3C006037.2	Melon (DHL92) v3.6.1	carmedB0228
Carg27348	CsaV3_3G008170	Cucumber (Chinese Long) v3	carcucB0247
Carg27348	Cla97C05G081140	Watermelon (97103) v2	carwmbB0219
Carg27348	Bhi01G000336	Wax gourd	carwgoB0269

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27348	Silver-seed gourd	carcarB254
Carg27348	Cucurbita moschata (Rifu)	carcmoB0302