Carg26924 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26924
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein, putative
Location	Cucurbita_argyrosperma_scaffold_323 : 41263 .. 41790 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGCGCCTCTTTCTCCTCCTTCTCCTCACAATTTCCCTCTCACTCTCCTCCGATGCCCGCCCTTGCAAGTCCCTCTTCGTTTCCTTTTCCCTTCTCCGCCACCGAACCCTCGATTCCCGCCATCATCCCTTCTCCGAGATGGCCCTAATCGTCGACATCACCGAGTTCAAATCATCCTCCCTCTCCCTTCCCGACGACATCCTCCTCCTCGATCTCCCTCGTCCTAGGCCCCACTCGCTTCCTCAACACTTCCCTTATGACTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCACCGTTGTTGTTGCTCTGCTCTTCGGCGTCGGCTGCGGCGCTCTCACTGCTGCTACTATGTATTTGGCGTACTCATTGTGCGCTGGTCGATTTGGGAATCGTTCTTCTGTGTATGACGATTCTGAGGAGGAGGATGACTTTAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCACCGACGACTCTGCTCCTGTTAAATCAGTGGTATGA

mRNA sequence

ATGGCGTCGCGCCTCTTTCTCCTCCTTCTCCTCACAATTTCCCTCTCACTCTCCTCCGATGCCCGCCCTTGCAAGTCCCTCTTCGTTTCCTTTTCCCTTCTCCGCCACCGAACCCTCGATTCCCGCCATCATCCCTTCTCCGAGATGGCCCTAATCGTCGACATCACCGAGTTCAAATCATCCTCCCTCTCCCTTCCCGACGACATCCTCCTCCTCGATCTCCCTCGTCCTAGGCCCCACTCGCTTCCTCAACACTTCCCTTATGACTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCACCGTTGTTGTTGCTCTGCTCTTCGGCGTCGGCTGCGGCGCTCTCACTGCTGCTACTATGTATTTGGCGTACTCATTGTGCGCTGGTCGATTTGGGAATCGTTCTTCTGTGTATGACGATTCTGAGGAGGAGGATGACTTTAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCACCGACGACTCTGCTCCTGTTAAATCAGTGGTATGA

Coding sequence (CDS)

ATGGCGTCGCGCCTCTTTCTCCTCCTTCTCCTCACAATTTCCCTCTCACTCTCCTCCGATGCCCGCCCTTGCAAGTCCCTCTTCGTTTCCTTTTCCCTTCTCCGCCACCGAACCCTCGATTCCCGCCATCATCCCTTCTCCGAGATGGCCCTAATCGTCGACATCACCGAGTTCAAATCATCCTCCCTCTCCCTTCCCGACGACATCCTCCTCCTCGATCTCCCTCGTCCTAGGCCCCACTCGCTTCCTCAACACTTCCCTTATGACTTCACCTCTCTCCGTGATCGCACCAAGGATATTCTCACCGTTGTTGTTGCTCTGCTCTTCGGCGTCGGCTGCGGCGCTCTCACTGCTGCTACTATGTATTTGGCGTACTCATTGTGCGCTGGTCGATTTGGGAATCGTTCTTCTGTGTATGACGATTCTGAGGAGGAGGATGACTTTAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCACCGACGACTCTGCTCCTGTTAAATCAGTGGTATGA

Protein sequence

MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKSSSLSLPDDILLLDLPRPRPHSLPQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAATMYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV

Homology

[Close]

BLAST of Carg26924 vs. NCBI nr
Match: XP_022983562.1 (uncharacterized protein LOC111482129 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 4.6e-87
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS
Sbjct: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60

Query: 61  SSLSLPDDILLLDLPRPRPHSLPQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120
           SSLS+PDDILLLDLPRPRPHSL QHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT
Sbjct: 61  SSLSVPDDILLLDLPRPRPHSLHQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120

Query: 121 MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 176
           MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV
Sbjct: 121 MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 175

[Close]

BLAST of Carg26924 vs. NCBI nr
Match: XP_022934580.1 (uncharacterized protein LOC111441715 [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 2.3e-86
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS
Sbjct: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60

Query: 61  SSLSLPDDILLLDLPRPRPHSLPQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120
           SSLSLPDDILLLDLPRPRPHSL QHFP+DFTSLRDRTKDILTVVVALLFGVGCGALTAAT
Sbjct: 61  SSLSLPDDILLLDLPRPRPHSLHQHFPFDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120

Query: 121 MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 176
           MYLAYSLCAGRFG+RSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV
Sbjct: 121 MYLAYSLCAGRFGDRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 175

[Close]

BLAST of Carg26924 vs. NCBI nr
Match: XP_023529044.1 (uncharacterized protein LOC111791795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-84
Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MASRLFLLLLLTISLS+SSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS
Sbjct: 1   MASRLFLLLLLTISLSISSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60

Query: 61  SSLSLPDDILLLDLPRPRPHSLPQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120
           SSLSLPD+ILLLDLPR RP SL QHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT
Sbjct: 61  SSLSLPDNILLLDLPRSRPPSLHQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAAT 120

Query: 121 MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 176
           MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV
Sbjct: 121 MYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKITDDSAPVKSVV 175

[Close]

BLAST of Carg26924 vs. NCBI nr
Match: XP_004145840.1 (PREDICTED: uncharacterized protein LOC101219659 [Cucumis sativus] >KGN57805.1 hypothetical protein Csa_3G313200 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 142/187 (75.94%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHSL-PQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 175
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E+EDD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. NCBI nr
Match: XP_008457042.1 (PREDICTED: uncharacterized protein LOC103496817 isoform X1 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 142/188 (75.53%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHS-LPQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 176
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E++DD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. TAIR10
Match: AT1G65720.1 (unknown protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.5e-12
Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 4   RLFLLLLLTISLSLSSDARPCKSLFV-SFSLLRHRTLDSRHHPFSEMALIVDITEFKSSS 63
           R  + ++  +S++  + ARPCK+  + S+SL       +    F+    +   T  + + 
Sbjct: 8   RFAIAVVAFLSITTITTARPCKTFLISSYSLSITPENPNLESDFTSTRFVTVFTIRRLNP 67

Query: 64  LSLPDDILLLDLPRPR---PHSLPQHFPYDFTSLRDRTKDILTVVVALLFGVGCGALTAA 123
             +    +     +P+     SLP     +  S RDRT+DIL+VVVALLFGVGCGALTAA
Sbjct: 68  HHVVPFFVNRRHEKPQIQSDRSLPL-ISDNINSFRDRTRDILSVVVALLFGVGCGALTAA 127

Query: 124 TMYLAYSLCAGRFGNRSSVYDDSEEEDDFSDDNKENIKKMGYIKI 165
           TMYL ++L   R   +S  +++ E        +  ++KK+GY+KI
Sbjct: 128 TMYLVWALVVNR---QSYDFEEEEXXXXXXXSDAASLKKLGYVKI 168

[Close]

BLAST of Carg26924 vs. TrEMBL
Match: tr|A0A1S3C467|A0A1S3C467_CUCME (uncharacterized protein LOC103496817 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 142/188 (75.53%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHS-LPQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 176
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E++DD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. TrEMBL
Match: tr|A0A0A0L741|A0A0A0L741_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G313200 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 142/187 (75.94%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHSL-PQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSPDPLFPSVADPTDILRFDLPRPTPVSASTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 175
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E+EDD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDEDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. TrEMBL
Match: tr|A0A1S3C4K4|A0A1S3C4K4_CUCME (uncharacterized protein LOC103496817 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-61
Identity = 141/187 (75.40%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHS-LPQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 175
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E++DD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. TrEMBL
Match: tr|A0A1S3C4P1|A0A1S3C4P1_CUCME (uncharacterized protein LOC103496817 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496817 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-61
Identity = 141/187 (75.40%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MASRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKS 60
           MAS LFLL L TIS S+ S ARPCKSLF+SFSL RHRTLDS  HPFS+MA+IVDITEFKS
Sbjct: 1   MASPLFLLFLFTISFSIPSQARPCKSLFLSFSLHRHRTLDS-PHPFSQMAIIVDITEFKS 60

Query: 61  SSLSL-----------PDDILLLDLPRPRPHS-LPQHFPYDFTSLRDRTKDILTVVVALL 120
           SS S            P DIL  DLPRP P S   QHFPYDFTSLRDRTKDIL+VVVALL
Sbjct: 61  SSFSSSSDPLFPSVADPTDILRFDLPRPTPVSATTQHFPYDFTSLRDRTKDILSVVVALL 120

Query: 121 FGVGCGALTAATMYLAYSLCAGRFGNRSSVYDD-SEEEDDFSDDNKENIKKMGYIKITDD 175
           FGVGCGALTAATMYLAYSL AG+FG+RSSVYDD  E++DD SDDNKENIKKMGYI I DD
Sbjct: 121 FGVGCGALTAATMYLAYSLFAGQFGHRSSVYDDFGEDDDDLSDDNKENIKKMGYINIPDD 180

[Close]

BLAST of Carg26924 vs. TrEMBL
Match: tr|A0A067LHU8|A0A067LHU8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07980 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20
Identity = 84/190 (44.21%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 3   SRLFLLLLLTISLSLSSDARPCKSLFVSFSLLRHRTLDSRHHPFSEMALIVDITEFKSSS 62
           S L LL LL   LS+S  ARPCK+LF+S      + L    +P S    +  +TE  S  
Sbjct: 8   SLLLLLFLLVSPLSISVSARPCKTLFISSYTFSIKPLYPNPNP-SSAGFVTIVTEI-SQQ 67

Query: 63  LSLPDDILL-----------LDLPRPRPHSLPQHFP-----YDFTSLRDRTKDILTVVVA 122
            S   D+ L              P+ R  S P  FP     YD +SLRDRTKDIL+VVVA
Sbjct: 68  RSYSSDVFLDGKIFRSNDNSDSEPQKRQESSPV-FPFGLSSYDMSSLRDRTKDILSVVVA 127

Query: 123 LLFGVGCGALTAATMYLAYSLCAGRFGNRSSVYD--DSEEEDDFSDDNKENIKKMGYIKI 175
           LLFGVGCGALTAATMYL +SL + R+  R   +D  D +E DD S       KK+GYIKI
Sbjct: 128 LLFGVGCGALTAATMYLVWSLFSNRYDYRYEEFDCEDEDEHDDLSP------KKVGYIKI 187

The following BLAST results are available for this feature:

BLAST of Carg26924 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983562.1	4.6e-87	98.86	uncharacterized protein LOC111482129 [Cucurbita maxima]	[more]
XP_022934580.1	2.3e-86	98.29	uncharacterized protein LOC111441715 [Cucurbita moschata]	[more]
XP_023529044.1	1.6e-84	97.14	uncharacterized protein LOC111791795 [Cucurbita pepo subsp. pepo]	[more]
XP_004145840.1	2.5e-61	75.94	PREDICTED: uncharacterized protein LOC101219659 [Cucumis sativus] >KGN57805.1 hy...	[more]
XP_008457042.1	2.5e-61	75.53	PREDICTED: uncharacterized protein LOC103496817 isoform X1 [Cucumis melo]	[more]

BLAST of Carg26924 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65720.1	4.5e-12	33.33	unknown protein	[more]

BLAST of Carg26924 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26924 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C467\|A0A1S3C467_CUCME	1.7e-61	75.53	uncharacterized protein LOC103496817 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L741\|A0A0A0L741_CUCSA	1.7e-61	75.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G313200 PE=4 SV=1	[more]
tr\|A0A1S3C4K4\|A0A1S3C4K4_CUCME	3.7e-61	75.40	uncharacterized protein LOC103496817 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C4P1\|A0A1S3C4P1_CUCME	3.7e-61	75.40	uncharacterized protein LOC103496817 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A067LHU8\|A0A067LHU8_JATCU	5.4e-20	44.21	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07980 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26924-RA	Carg26924-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35107	FAMILY NOT NAMED	coord: 2..167

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26924	Cla013202	Watermelon (97103) v1	carwmB0508
Carg26924	Csa3G313200	Cucumber (Chinese Long) v2	carcuB0538
Carg26924	MELO3C020251	Melon (DHL92) v3.5.1	carmeB0515
Carg26924	ClCG05G011320	Watermelon (Charleston Gray)	carwcgB0497
Carg26924	CSPI03G21390	Wild cucumber (PI 183967)	carcpiB0545
Carg26924	Cucsa.375350	Cucumber (Gy14) v1	carcgyB0586
Carg26924	CmaCh01G003670	Cucurbita maxima (Rimu)	carcmaB0718
Carg26924	CmaCh14G008350	Cucurbita maxima (Rimu)	carcmaB0717
Carg26924	CmoCh01G003850	Cucurbita moschata (Rifu)	carcmoB0696
Carg26924	CmoCh14G008500	Cucurbita moschata (Rifu)	carcmoB0695
Carg26924	Lsi05G003370	Bottle gourd (USVL1VR-Ls)	carlsiB464
Carg26924	Cp4.1LG02g17010	Cucurbita pepo (Zucchini)	carcpeB0720
Carg26924	Cp4.1LG03g05910	Cucurbita pepo (Zucchini)	carcpeB0721
Carg26924	CsGy3G020710	Cucumber (Gy14) v2	carcgybB0515
Carg26924	MELO3C020251.2	Melon (DHL92) v3.6.1	carmedB0521
Carg26924	CsaV3_3G021140	Cucumber (Chinese Long) v3	carcucB0544
Carg26924	Cla97C05G093430	Watermelon (97103) v2	carwmbB0535
Carg26924	Bhi01G001508	Wax gourd	carwgoB0621

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26924	Carg07455	Silver-seed gourd	carcarB495

The following block(s) are covering this gene:

None