Carg26809 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26809
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor TCP19
Location	Cucurbita_argyrosperma_scaffold_340 : 75782 .. 76807 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGCTAATCAAAACCATCGAGTTGAGGAAGAGGAACAGGAAGGAACCTCCAATGGCTGCTCTGAAACCCAGACCCAAACTACTGTGGATTCTTTAAATCTTGTTAAGGCTGAAGATAGTCTGTCGGGCCAACCGTCGGATCATCAAACAGCGGTTTCGGAGCACGGATTGGATACTTCGCATCCTTTCAGTCTTTTCCAGATACCGTCGACGCGGGCGAAACGTCCGTCCAAGGACCGCCACACGAAGGTGGAGGGCCGCGGCCGGAGGATTCGGATGCCGGCTGCTTGCGCTGCCCGTATCTTTCAGCTGACCAGAGAACTCGACCATAAGTCCGACGGGGAGACAATCCGGTGGCTACTCGAGCACGCAGAGCCGGCAATAATCGAAGCGACGGGAACAGGCACCGTTCCGGCCATCGCCGTTTCCGTTGGCGGGACGCTTAAAATTCCAACCACATCTCTGGCGAGGCCAAATGCGGAAATTTCCGAAGCACCGAGAAAAAGAAGACAAAAACACGCTTACGCCGAATCCAACAATGGCAACGATCACACTTCTGTTTCCTCGGGGCTTACGCCGATTACTCCAATGGCAGCTTACGGCGCCGGTATCGTTCCATTCTGGGCAAACGCCGGTGGCGTTACAGAGCAGTTCTTCATGGTTCCGGGAACGTCGAGCAACCAACAGCCGCAGCTCTGGGCGGTGCCGGCGAGACCCATATCTAATTTCGTGTCGTCAATAAATCCCAGTTTGCAATTCGGGGGTGTAGTGCCGATTCTAGCCAGAGGAGGTATAACAAATTGTTCCAGTGGAATGGGAAGTGGTTCTTCGTCGGCTACCATTTCTCAGAGTTCGATTCCGGTGACGATGAGTGCTCCGTCAACTTCGAGTGCGGCGTCTTCAATCGGTACCACTCAAATGTTGAGAGATTTCTCAATGGAAATTCACGAGAAGAAGGAACTGGAATTAATGGGTGGGGCAAAGGCTGCAAATTCTGAAGCGCCATGTTCAAAACCTTGA

mRNA sequence

ATGGAGGAAGCTAATCAAAACCATCGAGTTGAGGAAGAGGAACAGGAAGGAACCTCCAATGGCTGCTCTGAAACCCAGACCCAAACTACTGTGGATTCTTTAAATCTTGTTAAGGCTGAAGATAGTCTGTCGGGCCAACCGTCGGATCATCAAACAGCGGTTTCGGAGCACGGATTGGATACTTCGCATCCTTTCAGTCTTTTCCAGATACCGTCGACGCGGGCGAAACGTCCGTCCAAGGACCGCCACACGAAGGTGGAGGGCCGCGGCCGGAGGATTCGGATGCCGGCTGCTTGCGCTGCCCGTATCTTTCAGCTGACCAGAGAACTCGACCATAAGTCCGACGGGGAGACAATCCGGTGGCTACTCGAGCACGCAGAGCCGGCAATAATCGAAGCGACGGGAACAGGCACCGTTCCGGCCATCGCCGTTTCCGTTGGCGGGACGCTTAAAATTCCAACCACATCTCTGGCGAGGCCAAATGCGGAAATTTCCGAAGCACCGAGAAAAAGAAGACAAAAACACGCTTACGCCGAATCCAACAATGGCAACGATCACACTTCTGTTTCCTCGGGGCTTACGCCGATTACTCCAATGGCAGCTTACGGCGCCGGTATCGTTCCATTCTGGGCAAACGCCGGTGGCGTTACAGAGCAGTTCTTCATGGTTCCGGGAACGTCGAGCAACCAACAGCCGCAGCTCTGGGCGGTGCCGGCGAGACCCATATCTAATTTCGTGTCGTCAATAAATCCCAGTTTGCAATTCGGGGGTGTAGTGCCGATTCTAGCCAGAGGAGGTATAACAAATTGTTCCAGTGGAATGGGAAGTGGTTCTTCGTCGGCTACCATTTCTCAGAGTTCGATTCCGGTGACGATGAGTGCTCCGTCAACTTCGAGTGCGGCGTCTTCAATCGGTACCACTCAAATGTTGAGAGATTTCTCAATGGAAATTCACGAGAAGAAGGAACTGGAATTAATGGGTGGGGCAAAGGCTGCAAATTCTGAAGCGCCATGTTCAAAACCTTGA

Coding sequence (CDS)

ATGGAGGAAGCTAATCAAAACCATCGAGTTGAGGAAGAGGAACAGGAAGGAACCTCCAATGGCTGCTCTGAAACCCAGACCCAAACTACTGTGGATTCTTTAAATCTTGTTAAGGCTGAAGATAGTCTGTCGGGCCAACCGTCGGATCATCAAACAGCGGTTTCGGAGCACGGATTGGATACTTCGCATCCTTTCAGTCTTTTCCAGATACCGTCGACGCGGGCGAAACGTCCGTCCAAGGACCGCCACACGAAGGTGGAGGGCCGCGGCCGGAGGATTCGGATGCCGGCTGCTTGCGCTGCCCGTATCTTTCAGCTGACCAGAGAACTCGACCATAAGTCCGACGGGGAGACAATCCGGTGGCTACTCGAGCACGCAGAGCCGGCAATAATCGAAGCGACGGGAACAGGCACCGTTCCGGCCATCGCCGTTTCCGTTGGCGGGACGCTTAAAATTCCAACCACATCTCTGGCGAGGCCAAATGCGGAAATTTCCGAAGCACCGAGAAAAAGAAGACAAAAACACGCTTACGCCGAATCCAACAATGGCAACGATCACACTTCTGTTTCCTCGGGGCTTACGCCGATTACTCCAATGGCAGCTTACGGCGCCGGTATCGTTCCATTCTGGGCAAACGCCGGTGGCGTTACAGAGCAGTTCTTCATGGTTCCGGGAACGTCGAGCAACCAACAGCCGCAGCTCTGGGCGGTGCCGGCGAGACCCATATCTAATTTCGTGTCGTCAATAAATCCCAGTTTGCAATTCGGGGGTGTAGTGCCGATTCTAGCCAGAGGAGGTATAACAAATTGTTCCAGTGGAATGGGAAGTGGTTCTTCGTCGGCTACCATTTCTCAGAGTTCGATTCCGGTGACGATGAGTGCTCCGTCAACTTCGAGTGCGGCGTCTTCAATCGGTACCACTCAAATGTTGAGAGATTTCTCAATGGAAATTCACGAGAAGAAGGAACTGGAATTAATGGGTGGGGCAAAGGCTGCAAATTCTGAAGCGCCATGTTCAAAACCTTGA

Protein sequence

MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLSGQPSDHQTAVSEHGLDTSHPFSLFQIPSTRAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGSGSSSATISQSSIPVTMSAPSTSSAASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP

Homology

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BLAST of Carg26809 vs. NCBI nr
Match: XP_022945053.1 (transcription factor TCP19-like [Cucurbita moschata])

HSP 1 Score: 584.7 bits (1506), Expect = 2.0e-163
Identity = 331/344 (96.22%), Postives = 335/344 (97.38%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLSGQPSDHQTAVSEHGLD 60
           MEEANQNHRVEEEEQEG SNGCSETQTQTT DSLNL+KAE+SLSGQPSDHQTAVS HGLD
Sbjct: 1   MEEANQNHRVEEEEQEGISNGCSETQTQTTADSLNLIKAEESLSGQPSDHQTAVSGHGLD 60

Query: 61  TSHPFSLFQIPSTR---AKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE 120
           TSHPFSLFQIPSTR   AKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE
Sbjct: 61  TSHPFSLFQIPSTRAKPAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE 120

Query: 121 TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQKHAY 180
           TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNA+I EAPRKRRQKHAY
Sbjct: 121 TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAKIPEAPRKRRQKHAY 180

Query: 181 AESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAV 240
           AESNNGND TSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAV
Sbjct: 181 AESNNGNDQTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAV 240

Query: 241 PARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXX 300
           PARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
           XXXASSIGTT+MLRDFSMEIHEKKELELMG AKAANSEAPCSKP
Sbjct: 301 XXXASSIGTTEMLRDFSMEIHEKKELELMGRAKAANSEAPCSKP 344

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BLAST of Carg26809 vs. NCBI nr
Match: XP_022968027.1 (transcription factor TCP19-like [Cucurbita maxima])

HSP 1 Score: 582.8 bits (1501), Expect = 7.6e-163
Identity = 305/344 (88.66%), Postives = 308/344 (89.53%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLSGQPSDHQTAVSEHGLD 60
           MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAE+SLS QPSDHQTAVSEHGLD
Sbjct: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEESLSSQPSDHQTAVSEHGLD 60

Query: 61  TSHPFSLFQIPSTR---AKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE 120
           TSHPFSLFQIPSTR   AKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE
Sbjct: 61  TSHPFSLFQIPSTRAKPAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGE 120

Query: 121 TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQKHAY 180
           TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQKHAY
Sbjct: 121 TIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQKHAY 180

Query: 181 AESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAV 240
           AESNNGND TSVSSG TPITPMAAYGAGIVPFWANAGGV EQFFMVPGT SNQQPQLWAV
Sbjct: 181 AESNNGNDQTSVSSGFTPITPMAAYGAGIVPFWANAGGVAEQFFMVPGTLSNQQPQLWAV 240

Query: 241 PARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXX 300
           PARPISNFVSSINPSLQFGGVVP+LARGGITNCS+GMG                      
Sbjct: 241 PARPISNFVSSINPSLQFGGVVPVLARGGITNCSNGMGSGSSPATICQSSIPVTMSAPST 300

Query: 301 XXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
              ASSIGTTQMLRDFSMEIHEKKELELMG  K ANSEAPCSKP
Sbjct: 301 SSAASSIGTTQMLRDFSMEIHEKKELELMGRPKPANSEAPCSKP 344

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BLAST of Carg26809 vs. NCBI nr
Match: XP_022922618.1 (transcription factor TCP19-like [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 5.2e-119
Identity = 241/353 (68.27%), Postives = 269/353 (76.20%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLS---------GQPSDHQ 60
           MEEANQNHR+  +E+EG+SNG  + Q   TVDS NL K+E +LS           P   +
Sbjct: 1   MEEANQNHRL--DEKEGSSNGGCQNQDSCTVDSSNLAKSEGNLSDPHMEPPSTAVPKKEK 60

Query: 61  TAVSEHGLDTSHPFSLFQIPSTRA---KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120
             + EHGLD  HP SL QIPST A   KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR
Sbjct: 61  EGIMEHGLDIMHPLSLSQIPSTVAKPVKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120

Query: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAP 180
           ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EISEAP
Sbjct: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEAP 180

Query: 181 RKRRQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSS 240
           RK+R+K + +ESN+ ND  +VSSGLTPI PMAAYGAG+VPFW +AGGVTE FFM PGT +
Sbjct: 181 RKKRRKDSNSESNDCNDQATVSSGLTPIAPMAAYGAGLVPFWGSAGGVTEPFFMFPGTPN 240

Query: 241 NQQPQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXX 300
           N QPQLWAVPARPISNFVSS+NPSLQFGGV+P LARGG++N SSG+              
Sbjct: 241 NHQPQLWAVPARPISNFVSSMNPSLQFGGVMPFLARGGVSNSSSGL-------------- 300

Query: 301 XXXXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
                    XXX  + G+TQMLRDFS+EI+EKKELE MG    A +E PCSKP
Sbjct: 301 ESGSSPATAXXXXXTSGSTQMLRDFSLEIYEKKELEFMGRPSPAKTETPCSKP 337

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BLAST of Carg26809 vs. NCBI nr
Match: XP_023553054.1 (transcription factor TCP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.4 bits (1121), Expect = 8.8e-119
Identity = 241/353 (68.27%), Postives = 268/353 (75.92%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLS---------GQPSDHQ 60
           MEEANQNHR+  +E+EG+SNG  + Q   TVDS NL + E +LS           P   +
Sbjct: 1   MEEANQNHRL--DEKEGSSNGPCQNQDSCTVDSSNLARPEGNLSDPHMEPPSTAVPKKEK 60

Query: 61  TAVSEHGLDTSHPFSLFQIPSTRA---KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120
             + EHGLD  HP SL QIPST A   KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR
Sbjct: 61  EGIMEHGLDIMHPLSLSQIPSTVAKPVKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120

Query: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAP 180
           ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EISEAP
Sbjct: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEAP 180

Query: 181 RKRRQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSS 240
           RK+R+K + +ESN+ ND T+VSSGLTPI PMAAYGAG+VPFW +AGGVTE FFM PGT +
Sbjct: 181 RKKRRKDSNSESNDCNDQTTVSSGLTPIAPMAAYGAGLVPFWGSAGGVTEPFFMFPGTPN 240

Query: 241 NQQPQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXX 300
           N QPQLWAVPARPISNFVSS+NPSLQFGGV+P LARGG++N SSG+              
Sbjct: 241 NHQPQLWAVPARPISNFVSSMNPSLQFGGVMPFLARGGVSNSSSGL-------------- 300

Query: 301 XXXXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
                    XXX  + G+TQMLRDFS+EI+EKKELE MG    A  E PCSKP
Sbjct: 301 ESGSSPATAXXXXXTSGSTQMLRDFSLEIYEKKELEFMGRPSPAKPETPCSKP 337

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BLAST of Carg26809 vs. NCBI nr
Match: XP_022984441.1 (transcription factor TCP19-like [Cucurbita maxima])

HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118
Identity = 240/353 (67.99%), Postives = 267/353 (75.64%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLS---------GQPSDHQ 60
           MEEANQNHR+  +E+EG+SNG  + Q   TVDS NL K E +LS           P   +
Sbjct: 1   MEEANQNHRL--DEKEGSSNGGCQNQDSCTVDSSNLAKPEGNLSDPHMEPPSTAVPKKEK 60

Query: 61  TAVSEHGLDTSHPFSLFQIPSTRA---KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120
             + EHGLD  HP SL QIPST A   KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR
Sbjct: 61  EGIMEHGLDIMHPLSLSQIPSTVAKPVKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTR 120

Query: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAP 180
           ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EISEAP
Sbjct: 121 ELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEAP 180

Query: 181 RKRRQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSS 240
           RK+R+K + +ESN+ ND  +VSSGLTPI PMAAYGAG+VPFW +AGGVTE FFM PGT +
Sbjct: 181 RKKRRKDSNSESNDCNDQATVSSGLTPIAPMAAYGAGLVPFWGSAGGVTEPFFMFPGTPN 240

Query: 241 NQQPQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXX 300
           + QPQLWAVPARPISNFVSS+NPSLQFGGV+P LARGG++N SSG+              
Sbjct: 241 HHQPQLWAVPARPISNFVSSMNPSLQFGGVMPFLARGGVSNSSSGL-------------- 300

Query: 301 XXXXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
                    XXX  + G+TQMLRDFS+EI+EKKELE MG    A  E PCSKP
Sbjct: 301 ESGSSPATAXXXXXTSGSTQMLRDFSLEIYEKKELEFMGRPSPAKPETPCSKP 337

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BLAST of Carg26809 vs. TAIR10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-47
Identity = 127/279 (45.52%), Postives = 158/279 (56.63%), Query Frame = 0


Query: 76  KRP-SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEAT 135
           KRP SKDRHTKVEGRGRRIRMPA CAAR+FQLTREL HKSDGETIRWLLE AEPAIIEAT
Sbjct: 53  KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEAT 112

Query: 136 GTGTVPAIAVSVGGTLKIPTTSLARPNA---EISEAPRKRRQKHAYAESNNGND--HTSV 195
           GTGTVPAIAVSV GTLKIPT+S    +       +  +KRR+++  ++  + ND  H+SV
Sbjct: 113 GTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSV 172

Query: 196 SSGLTPITPMAAYGA--------GIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAVP--- 255
           +SGL PIT  + YG         G VPFW    G     F+  G   +Q  Q+WA+P   
Sbjct: 173 TSGLAPIT-ASNYGVNILNVNTQGFVPFWPMGMGTA---FVTGG--PDQMGQMWAIPTVA 232

Query: 256 --------ARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXX 315
                   ARP+S++VS+ + +                                      
Sbjct: 233 TAPFLNVGARPVSSYVSNASDA-------------------------------------- 282

Query: 316 XXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGA 330
                      S  GTTQ LRDFS+EI++K+EL+ +GG+
Sbjct: 293 -----EAEMETSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

[Close]

BLAST of Carg26809 vs. TAIR10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 164.9 bits (416), Expect = 9.0e-41
Identity = 130/282 (46.10%), Postives = 164/282 (58.16%), Query Frame = 0


Query: 79  SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGT 138
           +KDRHTKVEGRGRRIRMPA CAARIFQLTREL HKSDGETIRWLLE+AEPAII ATGTGT
Sbjct: 75  TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAATGTGT 134

Query: 139 VPAIAVSVGGTLKIPTTSLARPNAEISE-APRKRRQKHAYAESNNGNDHTSVSSGLTPIT 198
           VPAIA+SV GTLKIPTT+ A  ++++ E   +K+R++ + +E  + +D  S SSGL PI 
Sbjct: 135 VPAIAMSVNGTLKIPTTTNA--DSDMGENLMKKKRKRPSNSEYIDISDAVSASSGLAPIA 194

Query: 199 -------PMAAYGA---------GIVPFWANAGG----VTEQFFMVPGTSS-NQQPQLWA 258
                  P A   +         G+ P WA            FF++P  +  + QPQL A
Sbjct: 195 TTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQLLA 254

Query: 259 VPARPI--SNFVSSINPSLQFGGVVP--ILARGGITNCSSGMGXXXXXXXXXXXXXXXXX 318
            PA     S++V+++  +       P  ++   G  + S   G             XXXX
Sbjct: 255 FPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDVSG-SNLSRATSVMAPXXXX 314

Query: 319 XXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANS 335
           XXXXXXXX         LRDFS+EI+EK+EL        A S
Sbjct: 315 XXXXXXXXXXXXXXXHTLRDFSLEIYEKQELHQFMSTTTARS 353

[Close]

BLAST of Carg26809 vs. TAIR10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 116.3 bits (290), Expect = 3.7e-26
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 70  IPSTRAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPA 129
           +  +  K+P+KDRHTKV+GRGRRIRMPA CAAR+FQLTREL HKSDGETI WLL+ AEPA
Sbjct: 54  VVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPA 113

Query: 130 IIEATGTGTVPAIAVSVGGTLKI--PTTSLARPNAEISEAPRKRRQKHAYAESNNGNDHT 189
           II +TGTGT+PA   ++  +L+    +T  ++ +   S          +  E NNG + +
Sbjct: 114 IIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTGMSLYEDNNGTNGS 173

[Close]

BLAST of Carg26809 vs. TAIR10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 116.3 bits (290), Expect = 3.7e-26
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 79  SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGT 138
           +KDRHTKVEGRGRRIRMPA CAAR+FQLTREL HKSDGETI WLL+ AEPA+I ATGTGT
Sbjct: 52  TKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 111

Query: 139 VPAIAVSVGGTLKIPTTSLA 159
           +PA   S+  +L+   +SL+
Sbjct: 112 IPANFTSLNISLRSSRSSLS 131

[Close]

BLAST of Carg26809 vs. TAIR10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 75  AKRP------SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEP 134
           AK+P      +KDRHTKV+GRGRRIRMPA CAAR+FQLTREL HKSDGETI WLL+ AEP
Sbjct: 107 AKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEP 166

Query: 135 AIIEATGTGTVPAIAVSVGGTLKIPTTSLARPN 162
           ++I ATGTGT+PA   S+  +L+   +S++ P+
Sbjct: 167 SVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of Carg26809 vs. Swiss-Prot
Match: sp|Q9LT89|TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 127/279 (45.52%), Postives = 158/279 (56.63%), Query Frame = 0


Query: 76  KRP-SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEAT 135
           KRP SKDRHTKVEGRGRRIRMPA CAAR+FQLTREL HKSDGETIRWLLE AEPAIIEAT
Sbjct: 53  KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEAT 112

Query: 136 GTGTVPAIAVSVGGTLKIPTTSLARPNA---EISEAPRKRRQKHAYAESNNGND--HTSV 195
           GTGTVPAIAVSV GTLKIPT+S    +       +  +KRR+++  ++  + ND  H+SV
Sbjct: 113 GTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSV 172

Query: 196 SSGLTPITPMAAYGA--------GIVPFWANAGGVTEQFFMVPGTSSNQQPQLWAVP--- 255
           +SGL PIT  + YG         G VPFW    G     F+  G   +Q  Q+WA+P   
Sbjct: 173 TSGLAPIT-ASNYGVNILNVNTQGFVPFWPMGMGTA---FVTGG--PDQMGQMWAIPTVA 232

Query: 256 --------ARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXX 315
                   ARP+S++VS+ + +                                      
Sbjct: 233 TAPFLNVGARPVSSYVSNASDA-------------------------------------- 282

Query: 316 XXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGA 330
                      S  GTTQ LRDFS+EI++K+EL+ +GG+
Sbjct: 293 -----EAEMETSGGGTTQPLRDFSLEIYDKRELQFLGGS 282

[Close]

BLAST of Carg26809 vs. Swiss-Prot
Match: sp|O64647|TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39
Identity = 130/282 (46.10%), Postives = 164/282 (58.16%), Query Frame = 0


Query: 79  SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGT 138
           +KDRHTKVEGRGRRIRMPA CAARIFQLTREL HKSDGETIRWLLE+AEPAII ATGTGT
Sbjct: 75  TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAATGTGT 134

Query: 139 VPAIAVSVGGTLKIPTTSLARPNAEISE-APRKRRQKHAYAESNNGNDHTSVSSGLTPIT 198
           VPAIA+SV GTLKIPTT+ A  ++++ E   +K+R++ + +E  + +D  S SSGL PI 
Sbjct: 135 VPAIAMSVNGTLKIPTTTNA--DSDMGENLMKKKRKRPSNSEYIDISDAVSASSGLAPIA 194

Query: 199 -------PMAAYGA---------GIVPFWANAGG----VTEQFFMVPGTSS-NQQPQLWA 258
                  P A   +         G+ P WA            FF++P  +  + QPQL A
Sbjct: 195 TTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQLLA 254

Query: 259 VPARPI--SNFVSSINPSLQFGGVVP--ILARGGITNCSSGMGXXXXXXXXXXXXXXXXX 318
            PA     S++V+++  +       P  ++   G  + S   G             XXXX
Sbjct: 255 FPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGFVSVSDVSG-SNLSRATSVMAPXXXX 314

Query: 319 XXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANS 335
           XXXXXXXX         LRDFS+EI+EK+EL        A S
Sbjct: 315 XXXXXXXXXXXXXXXHTLRDFSLEIYEKQELHQFMSTTTARS 353

[Close]

BLAST of Carg26809 vs. Swiss-Prot
Match: sp|A2YXQ1|PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-29
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 79  SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGT 138
           ++DRHTKVEGRGRRIRMPAACAARIFQLTREL HKSDGETIRWLL+ +EPAII ATGTGT
Sbjct: 75  NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGT 134

Query: 139 VPAIAVSVGGTLKIPT 155
           VPAIA +V G L+IPT
Sbjct: 135 VPAIATTVDGVLRIPT 150

[Close]

BLAST of Carg26809 vs. Swiss-Prot
Match: sp|Q6ZBH6|PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-29
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 79  SKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGT 138
           ++DRHTKVEGRGRRIRMPAACAARIFQLTREL HKSDGETIRWLL+ +EPAII ATGTGT
Sbjct: 75  NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGT 134

Query: 139 VPAIAVSVGGTLKIPT 155
           VPAIA +V G L+IPT
Sbjct: 135 VPAIATTVDGVLRIPT 150

[Close]

BLAST of Carg26809 vs. Swiss-Prot
Match: sp|Q53PH2|PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-26
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 75  AKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEAT 134
           AKRP+KDRHTKVEGRGRRIRMPA CAAR+FQLTREL HK+DGETI WLL+ AEPAI+ AT
Sbjct: 148 AKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAAT 207

Query: 135 GTGTVPAIAVSVGGTLK 152
           GTGT+PA   S+  +L+
Sbjct: 208 GTGTIPANFSSLAVSLR 224

[Close]

BLAST of Carg26809 vs. TrEMBL
Match: tr|A0A1S3AYR7|A0A1S3AYR7_CUCME (transcription factor TCP19 OS=Cucumis melo OX=3656 GN=LOC103484035 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 6.0e-116
Identity = 237/354 (66.95%), Postives = 263/354 (74.29%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLSGQ---------PSDHQ 60
           MEE NQNHR+   E+EG+SNG  E  T +TVDS N  KAED LS +         P   +
Sbjct: 1   MEEVNQNHRL--YEKEGSSNGGYENLTNSTVDSSNPAKAEDVLSDRHVGPPSTAVPKKEK 60

Query: 61  TAVSEHGLDTSHPFSLFQIPST----RAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLT 120
             + EHGLD   P SL Q+PST    + KRPSKDRHTKVEGRGRRIRMPAACAARIFQLT
Sbjct: 61  EGIMEHGLDIMPPLSLSQVPSTTVAKQTKRPSKDRHTKVEGRGRRIRMPAACAARIFQLT 120

Query: 121 RELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEA 180
           RELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EISEA
Sbjct: 121 RELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEA 180

Query: 181 PRKRRQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTS 240
           PRKRR+K   +ESN+ ND  SVSSGLTPI PMAAYGAG+VPFW +AGGVTE FFMVPGTS
Sbjct: 181 PRKRRRKGPNSESNDCNDQASVSSGLTPIAPMAAYGAGLVPFWGSAGGVTEPFFMVPGTS 240

Query: 241 SNQQPQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXX 300
           +N QPQLWAVPARP+SN VSS+NP LQFGGVVP+L R  ++N SSG+             
Sbjct: 241 NNHQPQLWAVPARPLSNLVSSMNPGLQFGGVVPVLTR-AVSNGSSGL-----ESGSSPAM 300

Query: 301 XXXXXXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
                        AS+ G+TQMLRDFS+EI+EKKELE MG    A S+ PCSKP
Sbjct: 301 VSPSLIPGTVSAPASTSGSTQMLRDFSLEIYEKKELEFMGRPSPAKSKTPCSKP 346

[Close]

BLAST of Carg26809 vs. TrEMBL
Match: tr|A0A0A0L8J7|A0A0A0L8J7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G179190 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-112
Identity = 229/350 (65.43%), Postives = 259/350 (74.00%), Query Frame = 0


Query: 1   MEEANQNHRVEEEEQEGTSNGCSETQTQTTVDSLNLVKAEDSLSGQ-----PSDHQTAVS 60
           M+  NQNH +   ++EG+SNG  +  T TTVDS N  K +  LS +     P   +  + 
Sbjct: 1   MDALNQNHPL--NQKEGSSNGGYQNLTNTTVDSSNPAKPQHILSDRHVTPAPKKEKDGIM 60

Query: 61  EHGLDTSHPFSLFQIPST----RAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELD 120
           EHGLD   P +L Q+PST    + KRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELD
Sbjct: 61  EHGLDIMPPLTLSQVPSTTLAKQTKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELD 120

Query: 121 HKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKR 180
           HKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EISEAPRKR
Sbjct: 121 HKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEAPRKR 180

Query: 181 RQKHAYAESNNGNDHTSVSSGLTPITPMAAYGAGIVPFWANAGGVTEQFFMVPGTSSNQQ 240
           R+K   +ESN+ ND  SVSSGLTPI PMAAYGAG+VPFW +AGGVTE FFMVPGTS+N Q
Sbjct: 181 RRKGTNSESNDCNDQASVSSGLTPIAPMAAYGAGLVPFWGSAGGVTEPFFMVPGTSNNHQ 240

Query: 241 PQLWAVPARPISNFVSSINPSLQFGGVVPILARGGITNCSSGMGXXXXXXXXXXXXXXXX 300
           PQLWAVPARP+SN VSS+NP LQFGGVVP+L R  ++N SSG+                 
Sbjct: 241 PQLWAVPARPLSNLVSSMNPGLQFGGVVPVLTR-AVSNGSSGL-----ESGSSPAMVSAS 300

Query: 301 XXXXXXXXXASSIGTTQMLRDFSMEIHEKKELELMGGAKAANSEAPCSKP 342
                    AS+ G+TQMLRDFS+EI+EKKELE MG    A S+ PCSKP
Sbjct: 301 LIPGTVSAPASTSGSTQMLRDFSLEIYEKKELEFMGRRSPAKSQTPCSKP 342

[Close]

BLAST of Carg26809 vs. TrEMBL
Match: tr|W9RV44|W9RV44_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005361 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.1e-64
Identity = 163/323 (50.46%), Postives = 192/323 (59.44%), Query Frame = 0


Query: 60  DTSHPFSLFQIPS------TRAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHK 119
           + S P  L Q+PS        AKRPSKDRHTKVEGRGRRIRMPA CAARIFQLTREL  K
Sbjct: 64  EKSLPMGLLQVPSPGNKQVVAAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGLK 123

Query: 120 SDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQ 179
           SDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTS ARPN EI+E  RKRR+
Sbjct: 124 SDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEIAEVLRKRRR 183

Query: 180 KHAYAESNNGNDHTSVSSGLTPITPMAAYG----AGIVPFWANA--GGVTEQFFMVPGTS 239
           + + +E  + ND  SVSSGL PI P   YG     G+VP W     GG    F M P + 
Sbjct: 184 RASNSEFVDVNDQISVSSGLAPIAP-TTYGNGAAQGLVPLWPMGPNGGAAGPFLMFPNSG 243

Query: 240 S----NQQPQLWAVP------------ARPISNFVSSINP-------------SLQFGGV 299
           +        QLWA+P            ARPISNFVS++ P             S  F   
Sbjct: 244 AVPGLANHAQLWAIPAAAATPSFFGVQARPISNFVSALQPVQLRDSQVSSGSVSKTFSST 303

Query: 300 VPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXXXXXASSIGTTQMLRDFSMEIH 342
           V   +   I+  S G+G                         +++   TQMLRDFS+EI+
Sbjct: 304 VETTSNAMIST-SDGVG--------------------ASSSCSTTTSATQMLRDFSLEIY 363

[Close]

BLAST of Carg26809 vs. TrEMBL
Match: tr|A0A251QN09|A0A251QN09_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G288000 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 181/322 (56.21%), Postives = 207/322 (64.29%), Query Frame = 0


Query: 62  SHPFSLFQIP--------STRAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHK 121
           S P  L Q+P           AKR SKDRHTKVEGRGRRIRMPA CAARIFQLTREL HK
Sbjct: 65  SLPMGLIQVPVPTSSEKQVVAAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHK 124

Query: 122 SDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLARPNAEISEAPRKRRQ 181
           SDGETIRWLLEHAEPAI++ATGTGTVPAIAVSVGGTLKIPTTS ARPN EI+E PRKRR+
Sbjct: 125 SDGETIRWLLEHAEPAIMQATGTGTVPAIAVSVGGTLKIPTTSPARPNGEITEIPRKRRK 184

Query: 182 KHAYAESNNGNDHTSVSSGLTPIT------PMAAYGAGIVPFW-ANAGGVTEQFFMVP-- 241
           + + +E  + ++ +SVSSGL P++             G+VP W   A G    FFM P  
Sbjct: 185 RGSNSEFVDVHEQSSVSSGLAPMSYXXXXXXXXXXXXGLVPMWQVGATGAAGPFFMFPNN 244

Query: 242 GTSSNQQPQLWAVP------------ARPISNFVSSINPSLQ-FGGVVPILARGG----- 301
           G  +  QPQLWAVP            ARPISNF+S+  P +   GG V + A  G     
Sbjct: 245 GAMNTNQPQLWAVPAADAATPIFNFQARPISNFLSAFQPGVHVVGGDVQLQASSGSIXXX 304

Query: 302 -------ITNCSSGMGXXXXXXXXXXXXXXXXXXXXXXXXXASSIGTTQMLRDFSMEIHE 342
                           XXXXXXXXXXXXXXXXXXXXXXXXX       QMLRDFS+EI++
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMLRDFSLEIYD 364

[Close]

BLAST of Carg26809 vs. TrEMBL
Match: tr|A0A0D2T135|A0A0D2T135_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G197000 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 152/324 (46.91%), Postives = 191/324 (58.95%), Query Frame = 0


Query: 46  QPSDHQTAVSEHGLDTSHPFSLFQIPSTRA------KRPSKDRHTKVEGRGRRIRMPAAC 105
           QP   +        + ++P  +  +P+ R       KRPSKDRHTKVEGRGRRIRMPAAC
Sbjct: 50  QPMKEEALTDTEPQELANPTLVQVVPAARTQRSLAPKRPSKDRHTKVEGRGRRIRMPAAC 109

Query: 106 AARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSLAR 165
           AARIFQLTREL HKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSV GTLKIPT+S   
Sbjct: 110 AARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVNGTLKIPTSS--- 169

Query: 166 PNAEISEAPRKRRQKHAYAESNNGNDH-TSVSSGLTPITPMAA-----YGAGIVPFWANA 225
              +  E P+KRR++ + +E  + N+H +SVSSGL PI PM          G+VP W   
Sbjct: 170 -GKQEGELPKKRRRRPSNSEFIDVNEHQSSVSSGLAPIAPMTCNSFNLNSQGLVPIWPMG 229

Query: 226 GGVTEQFFMVPGTSSNQQPQLWAVPA----------RPISNFVSSINPSLQ------FGG 285
                 F ++P    + Q QLWA+PA          RPIS+FVS++ P +Q       G 
Sbjct: 230 -----TFSVLPAAPGSNQAQLWAIPATATPFFNVTGRPISSFVSAMQPEVQDSSVGSMGS 289

Query: 286 VVPILARGGITNCSSGMGXXXXXXXXXXXXXXXXXXXXXXXXXASSIGTTQMLRDFSMEI 342
            V   +  G T+ S+G                           +S+  TTQMLR+FS+EI
Sbjct: 290 SVLPTSSSGATSVSNG-------------------------NNSSNHSTTQMLREFSLEI 337

The following BLAST results are available for this feature:

BLAST of Carg26809 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945053.1	2.0e-163	96.22	transcription factor TCP19-like [Cucurbita moschata]	[more]
XP_022968027.1	7.6e-163	88.66	transcription factor TCP19-like [Cucurbita maxima]	[more]
XP_022922618.1	5.2e-119	68.27	transcription factor TCP19-like [Cucurbita moschata]	[more]
XP_023553054.1	8.8e-119	68.27	transcription factor TCP19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984441.1	5.7e-118	67.99	transcription factor TCP19-like [Cucurbita maxima]	[more]

BLAST of Carg26809 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51910.1	1.7e-47	45.52	TCP family transcription factor	[more]
AT2G45680.1	9.0e-41	46.10	TCP family transcription factor	[more]
AT1G72010.1	3.7e-26	51.64	TCP family transcription factor	[more]
AT1G69690.1	3.7e-26	71.25	TCP family transcription factor	[more]
AT3G47620.1	1.1e-25	62.37	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

BLAST of Carg26809 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LT89\|TCP19_ARATH	3.0e-46	45.52	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
sp\|O64647\|TCP9_ARATH	1.6e-39	46.10	Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1	[more]
sp\|A2YXQ1\|PCF2_ORYSI	2.0e-29	84.21	Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV...	[more]
sp\|Q6ZBH6\|PCF2_ORYSJ	2.0e-29	84.21	Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 ...	[more]
sp\|Q53PH2\|PCF3_ORYSJ	2.7e-26	75.32	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]

BLAST of Carg26809 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYR7\|A0A1S3AYR7_CUCME	6.0e-116	66.95	transcription factor TCP19 OS=Cucumis melo OX=3656 GN=LOC103484035 PE=4 SV=1	[more]
tr\|A0A0A0L8J7\|A0A0A0L8J7_CUCSA	1.4e-112	65.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G179190 PE=4 SV=1	[more]
tr\|W9RV44\|W9RV44_9ROSA	4.1e-64	50.46	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005361 PE=4 SV=1	[more]
tr\|A0A251QN09\|A0A251QN09_PRUPE	2.8e-60	56.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G288000 PE=4 SV=1	[more]
tr\|A0A0D2T135\|A0A0D2T135_GOSRA	1.0e-59	46.91	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G197000 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26809-RA	Carg26809-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 79..168 e-value: 1.1E-28 score: 100.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..191
None	No IPR available	PANTHER	PTHR31072:SF32	SUBFAMILY NOT NAMED	coord: 28..337
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 28..337
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 79..133 score: 26.545

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26809	Cla006219	Watermelon (97103) v1	carwmB0009
Carg26809	Csa3G179190	Cucumber (Chinese Long) v2	carcuB0007
Carg26809	MELO3C006863	Melon (DHL92) v3.5.1	carmeB0005
Carg26809	ClCG05G007740	Watermelon (Charleston Gray)	carwcgB0007
Carg26809	CSPI03G16480	Wild cucumber (PI 183967)	carcpiB0007
Carg26809	Cucsa.251110	Cucumber (Gy14) v1	carcgyB0006
Carg26809	CmaCh18G012150	Cucurbita maxima (Rimu)	carcmaB0011
Carg26809	CmaCh16G001580	Cucurbita maxima (Rimu)	carcmaB0010
Carg26809	CmoCh16G001620	Cucurbita moschata (Rifu)	carcmoB0010
Carg26809	Lsi05G012740	Bottle gourd (USVL1VR-Ls)	carlsiB006
Carg26809	Cp4.1LG09g01100	Cucurbita pepo (Zucchini)	carcpeB0008
Carg26809	Cp4.1LG14g05930	Cucurbita pepo (Zucchini)	carcpeB0009
Carg26809	CsGy3G016590	Cucumber (Gy14) v2	carcgybB0006
Carg26809	MELO3C006863.2	Melon (DHL92) v3.6.1	carmedB0006
Carg26809	CsaV3_3G016680	Cucumber (Chinese Long) v3	carcucB0007
Carg26809	Cla97C05G089650	Watermelon (97103) v2	carwmbB0006
Carg26809	Bhi01G001009	Wax gourd	carwgoB0008

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26809	Carg16709	Silver-seed gourd	carcarB005

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26809	Cucurbita moschata (Rifu)	carcmoB0011