Carg26802 (gene) Silver-seed gourd

Overview
NameCarg26802
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription factor bHLH118-like
LocationCucurbita_argyrosperma_scaffold_340 : 851 .. 2223 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTTTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGTGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATAGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGTTATTGCTGTCAAATTTTTTTTCTTTTTTTTTTTTTGTGATTTTTTATGAACCCACTTAGATCCGGTTGTTTTATCCCAAAATTAAGCAACCCTTTTGATGAATTTTTGTTTTCATCACTAAAAATCGTAGCTTTTTGGTGTTGTTCTTGGAGTTTCTAAAAGGGTTTTTTTTTTTGGTGTTGATTTCAGGGGAAAAGGGCGATATCGGATCAAATGAATGGAGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCGAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAGATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCTATGCACACCATTCAAATGGAGGTAAGATTATTGCTCGTTCATTCGTTTATTCTCGACAGTATCGTTTCATAACAATTTTGTTTCTTTGATGTGTCTATCATTTTCTATGCTTAGTACTTTTAGTTCTTGTAATCGTCCAAGCTTTAGGGGAAGTTTTAAAACACGTCTGTTAGGAGAGATTTTCGCACCCTTATAAAGGGTGTTTCGTTCCCCTCTCCAACTAATGTAGGATCTCATAATCCACTCCCCTTGGGAGACCAACATCCTCACTGGTACACTGCCTAGTGTTTAGTTTTGATACCATTTGTAACGGGTGGTTAAAGTTTTAAACTTGTTTTTGAAACAAATATGTTCAAGCACGAAAGCTTAATTCTTAAGAACAGAAATCAAAATCAAAATGATTATCGAACTCGACTGGTATCGTTCGTTCAAATGGATTCAGCTTTACAAATTTCGAACATGCAGGTTAGTGATTCAACCACCCTTGATCTCAGTCAGCTTGGAAAGAAGCTTACAGAAGCAGTGCCACAGCTGAAACAAGTAACAGATTAA

mRNA sequence

ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTTTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGTGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATAGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGGGAAAAGGGCGATATCGGATCAAATGAATGGAGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCGAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAGATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCTATGCACACCATTCAAATGGAGGTAAGATTATTGCTCGTTCATTCGTTTATTCTCGACACTTTACAAATTTCGAACATGCAGGTTAGTGATTCAACCACCCTTGATCTCAGTCAGCTTGGAAAGAAGCTTACAGAAGCAGTGCCACAGCTGAAACAAGTAACAGATTAA

Coding sequence (CDS)

ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTTTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGTGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATAGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGGGAAAAGGGCGATATCGGATCAAATGAATGGAGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCGAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAGATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCTATGCACACCATTCAAATGGAGGTAAGATTATTGCTCGTTCATTCGTTTATTCTCGACACTTTACAAATTTCGAACATGCAGGTTAGTGATTCAACCACCCTTGATCTCAGTCAGCTTGGAAAGAAGCTTACAGAAGCAGTGCCACAGCTGAAACAAGTAACAGATTAA

Protein sequence

MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNGVNNLGTRGRRKLLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQISNMQVSDSTTLDLSQLGKKLTEAVPQLKQVTD
Homology
[Close]
BLAST of Carg26802 vs. NCBI nr
Match: XP_022945714.1 (transcription factor bHLH118 [Cucurbita moschata])

HSP 1 Score: 457.6 bits (1176), Expect = 2.9e-125
Identity = 243/265 (91.70%), Postives = 245/265 (92.45%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL 60

Query: 61  QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN 120
           QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN
Sbjct: 61  QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN 120

Query: 121 YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFH 180
           YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFH
Sbjct: 121 YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFH 180

Query: 181 GFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQISNMQVSD 240
           GFPLSRILKVIVDQGLDVVRCGSTTMN+KS+HTIQME                    VSD
Sbjct: 181 GFPLSRILKVIVDQGLDVVRCGSTTMNNKSIHTIQME--------------------VSD 240

Query: 241 STTLDLSQLGKKLTEAVPQLKQVTD 266
           STTLDLSQLGKKLTEAVPQLKQVTD
Sbjct: 241 STTLDLSQLGKKLTEAVPQLKQVTD 245

[Close]
BLAST of Carg26802 vs. NCBI nr
Match: XP_022967981.1 (transcription factor bHLH118-like [Cucurbita maxima])

HSP 1 Score: 453.4 bits (1165), Expect = 5.4e-124
Identity = 240/265 (90.57%), Postives = 243/265 (91.70%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKLL 60

Query: 61  QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN 120
           QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN
Sbjct: 61  QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVN 120

Query: 121 YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFH 180
           YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILI TNDFH
Sbjct: 121 YIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILITTNDFH 180

Query: 181 GFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQISNMQVSD 240
           GFPLSRILKVIVDQGL+V+ CGSTTMNDKSMHTIQME                    VSD
Sbjct: 181 GFPLSRILKVIVDQGLEVISCGSTTMNDKSMHTIQME--------------------VSD 240

Query: 241 STTLDLSQLGKKLTEAVPQLKQVTD 266
           ST+LDLSQLGKKLTEAVPQLKQVTD
Sbjct: 241 STSLDLSQLGKKLTEAVPQLKQVTD 245

[Close]
BLAST of Carg26802 vs. NCBI nr
Match: XP_023541045.1 (transcription factor bHLH118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 3.9e-122
Identity = 241/266 (90.60%), Postives = 241/266 (90.60%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHD-DSXXXXXXVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHD   XXXXXX  NLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDXXXXXXXXXXXNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQISNMQVS 240
           HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQME                    VS
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQME--------------------VS 240

Query: 241 DSTTLDLSQLGKKLTEAVPQLKQVTD 266
           DSTTLDLSQLGKKLTEAVPQLKQVTD
Sbjct: 241 DSTTLDLSQLGKKLTEAVPQLKQVTD 246

[Close]
BLAST of Carg26802 vs. NCBI nr
Match: XP_022141227.1 (transcription factor bHLH118-like [Momordica charantia] >XP_022141228.1 transcription factor bHLH118-like [Momordica charantia] >XP_022141229.1 transcription factor bHLH118-like [Momordica charantia])

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 179/277 (64.62%), Postives = 202/277 (72.92%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVS------VEAHDDSXXXXXXVNNLGTR 60
           M+PLQK E+KCFQISFNPHQHIIPEDLIFG  VS             XXXXXX       
Sbjct: 1   MYPLQKAEEKCFQISFNPHQHIIPEDLIFGRHVSEXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  GRRKLLQNLDH-----GVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKR 120
               L  +LD+     GVSD DH  K+MHRERERQRRQEMG+LYMSLRTLLPLEFIKGKR
Sbjct: 61  XXXXLTTHLDNLHASGGVSDLDHNAKIMHRERERQRRQEMGSLYMSLRTLLPLEFIKGKR 120

Query: 121 AISDQMNGAVNYIKYQKKKIKEFEAKRDELKKL-YNSSNDLEISRGQTPICSFKVSSFDG 180
           AISDQMNGAVNYIK+QKKKIKE EAKRDELKKL  N+ N  E SRGQTPICSFK+SSF G
Sbjct: 121 AISDQMNGAVNYIKHQKKKIKEIEAKRDELKKLDDNNWNRFEKSRGQTPICSFKISSFGG 180

Query: 181 GLEILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFIL 240
           GLEI+I T+ F+GFPLSRILKV+V+QGLDV+ C S+++N+KS+HT+QMEVR         
Sbjct: 181 GLEIVITTSGFNGFPLSRILKVVVEQGLDVISCSSSSVNEKSIHTVQMEVR--------- 240

Query: 241 DTLQISNMQVSDSTTLDLSQLGKKLTEAVPQLKQVTD 266
                      D T+LDL QL KKLTEAVP L+ V D
Sbjct: 241 -----------DLTSLDLPQLEKKLTEAVPLLRPVID 257

[Close]
BLAST of Carg26802 vs. NCBI nr
Match: XP_004148118.1 (PREDICTED: transcription factor bHLH118-like [Cucumis sativus] >KGN57316.1 hypothetical protein Csa_3G178570 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 4.8e-64
Identity = 158/274 (57.66%), Postives = 183/274 (66.79%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEA-------HDDSXXXXXXVNNLGT 60
           M+PL+K E+KCFQISFNPHQHIIPEDLIF   VS              XXXXXX   L T
Sbjct: 1   MYPLRKSEEKCFQISFNPHQHIIPEDLIFEHHVSAAVXXXXXXXXXXXXXXXXXXXXLST 60

Query: 61  RGRRK-LLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120
             RRK L++ L+                       EMGALYMSLRTLLPLEFIKGKRAIS
Sbjct: 61  PRRRKPLVETLED--XXXXXXXXXXXXXXXXXXXXEMGALYMSLRTLLPLEFIKGKRAIS 120

Query: 121 DQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGG-LE 180
           DQMNGAVNYIK+Q+KKIKE EAKRDELKK+ NSSN       + P CSFK+S FDGG +E
Sbjct: 121 DQMNGAVNYIKHQEKKIKEIEAKRDELKKMNNSSNFERSKLEEIPNCSFKISCFDGGVVE 180

Query: 181 ILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTL 240
           ILI T  FHGFPLSRILKV+V+QGL+V+RCGS+ +N KS+HTIQ+E              
Sbjct: 181 ILITTIGFHGFPLSRILKVVVEQGLEVIRCGSSIINHKSIHTIQIE-------------- 240

Query: 241 QISNMQVSDSTTLDLSQLGKKLTEAVPQLKQVTD 266
                 V+D T+LDL++LG KL EAVP L+QVTD
Sbjct: 241 ------VNDPTSLDLAELGNKLREAVPLLRQVTD 252

[Close]
BLAST of Carg26802 vs. TAIR10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 7.0e-25
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           K+MHRE ERQRRQEM +LY SLR+LLPL FIKGKR+ SDQ+N AVNYIKY ++KIKE   
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 135 KRDELK-----KLYNSSN-----DLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFP- 194
           +RD+L       L  SSN     D+E+  G+  +    V     G+EI++ +    G P 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVV---VRQCLVGVEIMLSSRCCGGQPR 122

Query: 195 LSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
            S +L+V+ + GL ++   S+ ++D+ ++TIQ EV
Sbjct: 123 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]
BLAST of Carg26802 vs. TAIR10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-24
Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           KL+HR  ERQRRQEM  L+ SLR+ LPL++IKGKRA+SD +NGAV++IK  + +IK+  A
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSA 87

Query: 135 KRDELKKLYNSSNDL-----EISRGQTPICSFKVSSFDGGLEILI--ITNDFHGFPLSRI 194
           +RDELK+       L               S  V     G E+++  + +    +PLSR+
Sbjct: 88  RRDELKREIGDPTSLTGXXXXXXXXXXXPASVMVQPCVSGFEVVVSSLASGLEAWPLSRV 147

Query: 195 LKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           L+V+  QGL+V+   +  +N++ M+TIQ+EV
Sbjct: 148 LEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]
BLAST of Carg26802 vs. TAIR10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           KL+H+E E++RRQEM +LY SLR+LLPLEFI+GKR+ SDQ+ GAVNYI Y ++ IK+  +
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 135 KRDELKKL----YNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKV 194
           KRD+L  L    + SSN+ E +     +    +     G+EI++        P S +L+V
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISNHVV---IRPCLVGIEIVL---SILQTPFSSVLQV 122

Query: 195 IVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           + + GL V+    +++ND+ +HT+Q EV
Sbjct: 123 LREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]
BLAST of Carg26802 vs. TAIR10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 0 

Query: 78  HRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEAKRD 137
           HR+ ERQRRQEM  L+ +LRT LPL++IKGKRA+SD +NGAVN+IK  + +I        
Sbjct: 47  HRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIXXXXXXXX 106

Query: 138 ELKKL----YNSSND---LEISRGQTPICSFKVSSFDGGLEILIITNDF--HGFPLSRIL 197
                    Y S+ D        G++   +  V     GLE+++ +N       PLS++L
Sbjct: 107 XXXXXXXQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVL 166

Query: 198 KVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           + I ++GL+V+   +T +ND+ MHTIQ+EV
Sbjct: 167 ETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of Carg26802 vs. TAIR10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0 

Query: 69  DQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKK 128
           D+    +  H+E ERQRRQE  +L+  LR LLP ++IKGKR+ +D +  AVNYIK  +KK
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 129 IKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDG---------------GLEIL 188
           IKE   KRD +K+     +    SRG+  I S   S+                  GLEI+
Sbjct: 130 IKEVSEKRDRIKRSITHPS----SRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIV 189

Query: 189 IITNDFHGFPLSRILKVIV-DQGLDVVRCGSTTMNDKSMHTIQMEV 219
           +   + H   LS +L+++  +Q  ++V C ST ++   +HTI  EV
Sbjct: 190 VSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 231

[Close]
BLAST of Carg26802 vs. Swiss-Prot
Match: sp|Q9FLI1|BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           K+MHRE ERQRRQEM +LY SLR+LLPL FIKGKR+ SDQ+N AVNYIKY ++KIKE   
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 135 KRDELK-----KLYNSSN-----DLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFP- 194
           +RD+L       L  SSN     D+E+  G+  +    V     G+EI++ +    G P 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVV---VRQCLVGVEIMLSSRCCGGQPR 122

Query: 195 LSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
            S +L+V+ + GL ++   S+ ++D+ ++TIQ EV
Sbjct: 123 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]
BLAST of Carg26802 vs. Swiss-Prot
Match: sp|Q9FLI0|BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 6.3e-23
Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           KL+HR  ERQRRQEM  L+ SLR+ LPL++IKGKRA+SD +NGAV++IK  + +IK+  A
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSA 87

Query: 135 KRDELKKLYNSSNDL-----EISRGQTPICSFKVSSFDGGLEILI--ITNDFHGFPLSRI 194
           +RDELK+       L               S  V     G E+++  + +    +PLSR+
Sbjct: 88  RRDELKREIGDPTSLTGXXXXXXXXXXXPASVMVQPCVSGFEVVVSSLASGLEAWPLSRV 147

Query: 195 LKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           L+V+  QGL+V+   +  +N++ M+TIQ+EV
Sbjct: 148 LEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]
BLAST of Carg26802 vs. Swiss-Prot
Match: sp|Q9STJ7|BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-21
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 75  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 134
           KL+H+E E++RRQEM +LY SLR+LLPLEFI+GKR+ SDQ+ GAVNYI Y ++ IK+  +
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 135 KRDELKKL----YNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKV 194
           KRD+L  L    + SSN+ E +     +    +     G+EI++        P S +L+V
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISNHVV---IRPCLVGIEIVL---SILQTPFSSVLQV 122

Query: 195 IVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           + + GL V+    +++ND+ +HT+Q EV
Sbjct: 123 LREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]
BLAST of Carg26802 vs. Swiss-Prot
Match: sp|Q9STJ6|BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-19
Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 0 

Query: 78  HRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEAKRD 137
           HR+ ERQRRQEM  L+ +LRT LPL++IKGKRA+SD +NGAVN+IK  + +I        
Sbjct: 47  HRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIXXXXXXXX 106

Query: 138 ELKKL----YNSSND---LEISRGQTPICSFKVSSFDGGLEILIITNDF--HGFPLSRIL 197
                    Y S+ D        G++   +  V     GLE+++ +N       PLS++L
Sbjct: 107 XXXXXXXQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVL 166

Query: 198 KVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           + I ++GL+V+   +T +ND+ MHTIQ+EV
Sbjct: 167 ETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of Carg26802 vs. Swiss-Prot
Match: sp|Q9LN95|BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0 

Query: 69  DQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKK 128
           D+    +  H+E ERQRRQE  +L+  LR LLP ++IKGKR+ +D +  AVNYIK  +KK
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 129 IKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDG---------------GLEIL 188
           IKE   KRD +K+     +    SRG+  I S   S+                  GLEI+
Sbjct: 130 IKEVSEKRDRIKRSITHPS----SRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIV 189

Query: 189 IITNDFHGFPLSRILKVIV-DQGLDVVRCGSTTMNDKSMHTIQMEV 219
           +   + H   LS +L+++  +Q  ++V C ST ++   +HTI  EV
Sbjct: 190 VSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 231

[Close]
BLAST of Carg26802 vs. TrEMBL
Match: tr|A0A0A0LB70|A0A0A0LB70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G178570 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 158/274 (57.66%), Postives = 183/274 (66.79%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEA-------HDDSXXXXXXVNNLGT 60
           M+PL+K E+KCFQISFNPHQHIIPEDLIF   VS              XXXXXX   L T
Sbjct: 1   MYPLRKSEEKCFQISFNPHQHIIPEDLIFEHHVSAAVXXXXXXXXXXXXXXXXXXXXLST 60

Query: 61  RGRRK-LLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120
             RRK L++ L+                       EMGALYMSLRTLLPLEFIKGKRAIS
Sbjct: 61  PRRRKPLVETLED--XXXXXXXXXXXXXXXXXXXXEMGALYMSLRTLLPLEFIKGKRAIS 120

Query: 121 DQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGG-LE 180
           DQMNGAVNYIK+Q+KKIKE EAKRDELKK+ NSSN       + P CSFK+S FDGG +E
Sbjct: 121 DQMNGAVNYIKHQEKKIKEIEAKRDELKKMNNSSNFERSKLEEIPNCSFKISCFDGGVVE 180

Query: 181 ILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTL 240
           ILI T  FHGFPLSRILKV+V+QGL+V+RCGS+ +N KS+HTIQ+E              
Sbjct: 181 ILITTIGFHGFPLSRILKVVVEQGLEVIRCGSSIINHKSIHTIQIE-------------- 240

Query: 241 QISNMQVSDSTTLDLSQLGKKLTEAVPQLKQVTD 266
                 V+D T+LDL++LG KL EAVP L+QVTD
Sbjct: 241 ------VNDPTSLDLAELGNKLREAVPLLRQVTD 252

[Close]
BLAST of Carg26802 vs. TrEMBL
Match: tr|A0A1S3AYQ1|A0A1S3AYQ1_CUCME (transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103484024 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.1e-64
Identity = 154/274 (56.20%), Postives = 181/274 (66.06%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLG-------- 60
           M+PL+K E+KCFQISFNPHQHIIPEDLIFG           XXXXXX             
Sbjct: 1   MYPLRKSEEKCFQISFNPHQHIIPEDLIFGHXXXXXXXXXXXXXXXXXXXXXXXXXXLSM 60

Query: 61  TRGRRKLLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120
            R R+ L++ L+                       EMGALYMSLRTLLPLEFIKGKRAIS
Sbjct: 61  ARRRKPLVETLED--XXXXXXXXXXXXXXXXXXXXEMGALYMSLRTLLPLEFIKGKRAIS 120

Query: 121 DQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGG-LE 180
           DQMNGAVNYIK+Q++KIKE EAKRDELKK+YNS+N       +T  CSFK+S FDGG +E
Sbjct: 121 DQMNGAVNYIKHQEQKIKEIEAKRDELKKMYNSNNFERSKLEETSNCSFKISCFDGGVVE 180

Query: 181 ILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTL 240
           ILI T  FHGFPLSRILKV+V+QGL+V+RCGST +N KS+HTIQ+E              
Sbjct: 181 ILITTIGFHGFPLSRILKVVVEQGLEVIRCGSTIINHKSIHTIQIE-------------- 240

Query: 241 QISNMQVSDSTTLDLSQLGKKLTEAVPQLKQVTD 266
                 V+D T+LDL++LG KL EAVP L+QVTD
Sbjct: 241 ------VNDPTSLDLAELGNKLIEAVPLLRQVTD 252

[Close]
BLAST of Carg26802 vs. TrEMBL
Match: tr|B9I4H5|B9I4H5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G132000v3 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 114/264 (43.18%), Postives = 155/264 (58.71%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPH-QHIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRKL 60
           MFPL + ++ CF IS +PH QH IP+DLI     +++  D          N     RR+ 
Sbjct: 1   MFPLHQGDELCFNISSDPHQQHNIPQDLILARYAALQGSD--------TTNKMENDRRRF 60

Query: 61  LQNLD--HGVS---DQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQ 120
           L ++D  H V+    +++  K+MHR  ERQRRQEM  LY SLR LLPLEFIKGKR+ISD 
Sbjct: 61  LISMDSNHEVARDHSKNNNKKMMHRNIERQRRQEMTTLYASLRALLPLEFIKGKRSISDH 120

Query: 121 MNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLE--ISRGQTPICSFKVSSFDGGLEI 180
           MN +VNYIKY +KKIKE  AKRD LKK  N S D     S   +PI    +  + GG+E+
Sbjct: 121 MNESVNYIKYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSNKYSPISPVTLQPYPGGIEV 180

Query: 181 LIITNDFHG--FPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDT 240
            +  +DF G   PLSR+L+V++++G+ VV C ST +N++  HT+Q E             
Sbjct: 181 -VFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTE------------- 235

Query: 241 LQISNMQVSDSTTLDLSQLGKKLT 255
                  V+D   L+LS+L +KLT
Sbjct: 241 -------VNDPACLNLSELRQKLT 235

[Close]
BLAST of Carg26802 vs. TrEMBL
Match: tr|A0A2I4FG47|A0A2I4FG47_9ROSI (transcription factor bHLH36-like OS=Juglans regia OX=51240 GN=LOC108998513 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.9e-39
Identity = 117/267 (43.82%), Postives = 157/267 (58.80%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPH-QHIIP-EDLIFGPQVSVEAHDDSXXXXXXVNNLGTRG-RR 60
           MFPL +  +  FQI  +PH QH IP +DLI G   S++            N    +G RR
Sbjct: 1   MFPLHQSNELVFQICSHPHQQHKIPDQDLIVG-HASLDCSS--------FNTTMIKGQRR 60

Query: 61  KLLQNLDH--GVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQM 120
           KL  +LDH  G  ++  + K+ HR+ ERQRRQEM  L+ SLR+ LPLEFIKGKR+ SD +
Sbjct: 61  KLCDSLDHNYGNFNEKKKQKMRHRDVERQRRQEMTTLFASLRSSLPLEFIKGKRSKSDHI 120

Query: 121 NGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILII 180
           N A NYIK+ +KKIKE    RD LKK  N+++    S   +P    KV+    G+EILI 
Sbjct: 121 NEAGNYIKHLQKKIKELSTVRDNLKKHSNTTDHGSGSSNSSPPSFVKVNPCRDGVEILIT 180

Query: 181 TN-DFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQIS 240
           ++ +    PLSR+L+V+++ GL VV C ST +N++ +HTIQ E                 
Sbjct: 181 SSFEEERMPLSRVLEVLIEGGLTVVNCVSTKVNERFLHTIQSE----------------- 238

Query: 241 NMQVSDSTTLDLSQLGKKLTEAVPQLK 262
              VSDST  DLS+L KKLTEA+P L+
Sbjct: 241 ---VSDSTEPDLSELQKKLTEAIPSLR 238

[Close]
BLAST of Carg26802 vs. TrEMBL
Match: tr|A0A151QME0|A0A151QME0_CAJCA (Transcription factor bHLH36 OS=Cajanus cajan OX=3821 GN=KK1_048207 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.5e-37
Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 0 

Query: 1   MFPLQKCEDKCFQISFNPHQ--HIIPEDLIFGPQVSVEAHDDSXXXXXXVNNLGTRGRRK 60
           MFPLQ+  +   Q S +PHQ  H I EDLI     S++ +D             T  R K
Sbjct: 1   MFPLQRGNELVIQFSNSPHQHEHKISEDLILDDYASLDVNDSDRKI--------TSSRPK 60

Query: 61  LL----QNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQ 120
            L       +HG S++ ++ K++H+E ERQRRQEM   + SLR+LLPLEFIKGKR+ISD 
Sbjct: 61  KLFCVADKKNHGNSNEHNKKKMIHKEIERQRRQEMATFFASLRSLLPLEFIKGKRSISDH 120

Query: 121 MNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILI 180
           MN AVNYIK+ +  IKE  A+RDELKKL N SN      G    C+F V   +G + I I
Sbjct: 121 MNEAVNYIKHMQNNIKELGARRDELKKLSNYSNTENNQEGLHTSCNFTVHENNGIMGIEI 180

Query: 181 ITNDFHGFP-LSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHSFILDTLQI 240
            +      P LS++LK+++++GL++V C ST +N + ++++Q E                
Sbjct: 181 TSGSREKRPKLSKLLKLLIEEGLEIVSCLSTEVNGRLIYSVQCE---------------- 237

Query: 241 SNMQVSDSTTLDLSQLGKKLTEAVP 259
               V++S+++DLS+L KK+  A P
Sbjct: 241 ----VNNSSSVDLSELRKKVCNAFP 237

The following BLAST results are available for this feature:
BLAST of Carg26802 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945714.12.9e-12591.70transcription factor bHLH118 [Cucurbita moschata][more]
XP_022967981.15.4e-12490.57transcription factor bHLH118-like [Cucurbita maxima][more]
XP_023541045.13.9e-12290.60transcription factor bHLH118 [Cucurbita pepo subsp. pepo][more]
XP_022141227.16.3e-8064.62transcription factor bHLH118-like [Momordica charantia] >XP_022141228.1 transcri... [more]
XP_004148118.14.8e-6457.66PREDICTED: transcription factor bHLH118-like [Cucumis sativus] >KGN57316.1 hypot... [more]
BLAST of Carg26802 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51780.17.0e-2545.81basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51790.13.5e-2441.72basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25400.11.9e-2242.57basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25410.11.8e-2040.00basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G12540.11.6e-1636.75basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Carg26802 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FLI1|BH036_ARATH1.3e-2345.81Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1[more]
sp|Q9FLI0|BH120_ARATH6.3e-2341.72Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=... [more]
sp|Q9STJ7|BH118_ARATH3.4e-2142.57Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=... [more]
sp|Q9STJ6|BH126_ARATH3.2e-1940.00Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=... [more]
sp|Q9LN95|BH055_ARATH2.8e-1536.75Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1[more]
BLAST of Carg26802 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LB70|A0A0A0LB70_CUCSA3.2e-6457.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G178570 PE=4 SV=1[more]
tr|A0A1S3AYQ1|A0A1S3AYQ1_CUCME7.1e-6456.20transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103484024 PE=4 S... [more]
tr|B9I4H5|B9I4H5_POPTR1.1e-4043.18Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G132000v3 PE=... [more]
tr|A0A2I4FG47|A0A2I4FG47_9ROSI7.9e-3943.82transcription factor bHLH36-like OS=Juglans regia OX=51240 GN=LOC108998513 PE=4 ... [more]
tr|A0A151QME0|A0A151QME0_CAJCA1.5e-3740.00Transcription factor bHLH36 OS=Cajanus cajan OX=3821 GN=KK1_048207 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR015660MASH1/Ascl1a-like
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26802-RACarg26802-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..149
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 1..219
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 79..131
e-value: 0.0042
score: 26.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 77..124
e-value: 1.6E-6
score: 27.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 73..125
score: 12.163
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 65..153
e-value: 9.9E-8
score: 33.8
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 71..140
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 1..219