Carg26539 (gene) Silver-seed gourd

Overview
NameCarg26539
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTryptophan synthase beta chain
LocationCucurbita_argyrosperma_scaffold_315 : 149542 .. 151863 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTATTTTGTTCGAGGGAAGGATTGTGCTCAAAATGGACATTATCATGATATGAATAGAGTTGTGATTCCTACAATAGTATTCGTGATTAATTTGGGTGTTGTGGCTGTGCAGGAGGAGCTGGAGGTGGCGCTGAGGGACTTTGTTGGGCGAGAGACGCCGCTGTATCACGCTGAGAGGCTGACAAGTATCTACAAGACGAGGAGGAAAAGGCCCCGAGATTTACAAAAAGAGAGAGGATCTGAACCATTGCGGTGCACACAAGATGAACAATGCAATAGCGCAGTTATGATTGCAAGCGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTTGGGGCTGGCCAGCATGGTGGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGAGTGCACCATTTTGATGGCTGCTCTGACTATTCAAGAAGCAATCCTCAAATGTTGTCTTAATCAAGCTACTCGTGCTCAGGTACTCCCATTAATTTGTCAAAAGTATTGTTGGAAGGGAATCCAAATCGACTAATTAGGAATGATCATGAATTTATACAAAGAATATATGTCCATGATGTATGAGGCCTTTTTTGGATGTCCAAAGCCACGAGAGCTTTATGCTCAAAGTGGACAATATCATATATTATCATCTCGTGGAGATTCGTGATTCCTAACAGATTTAATATTCAGGTGTAAAAATCTGTAGAAGGAAACTTCAAGGATGCGTCGTCGGAGGCGATAAGAGAGTGGGTCGGGGACTTGGAAACGAGCTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCTATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGACGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATAGAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGGTTTACCATGGAGCTTTGAGTTACCTTTTGCAAGATGAGGAAGGCCAAATCCTTGTTCCTCATTCCGTTGGTATAGGGTAAGTATGTTAGAAAGCCTCGTACTAATGGATATGTATTTCTTAGGTAAGTATGTTAGAAAGCCTCGTACTAATGAATATGTATTTCTTACTTATAAACTCATTATAAACCTCTTAATTAGCCGATGTGGCACTCATCTCCCAACAATCCTCAACAATCCTCAACAATCTTCCCCTCAGATAAAGTACACCATAGAGATTCCCCTGAGACCTATGGAATCCTCGAACAGCCTCCTCATCCGGAGCTCTCAACAATTCTTCCCTCAAATAAAGTACACTATAGAGCCTTCTCTGAAGTCTATGGAACTCTCAAACAACCTCCCTTTAATTCTCTCCTCAAAGAAAGTACACCATAGAACCTCATTTGAGGGCCTGCGAAACCCTCGAACAATCTCTCCTTAATCCTCCCCTCAATTAAAGTATACCATAGAGCTTCCTCTAAGGCCTATGGAACCCTCGAACAACCTCCCCTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCCTCAAAGATCCTCTCCTCGGATGAAGTACACCATAAAGCTTCTCTTGAGGCTTATAGAGCCCTTGAACAGCCTTTCCTTAATCAAGACTCAACTCCTTTGGGGCCCTCGAACAAAATACACCATTTGTTCAACATTTAGTCACTTTTTACTACACTTTCAAGGCTCACAACTTCTTTATTCGACATTTGAGAATTCTATTGACATGGCTAAGTTAAGGACATGGCTCTGATACCGTGTTAGAAATCACGAATCTCCACAATTGTATGATATTATCCACTTTGAGTATTACCAATGAAGATGTATTCCTTACTTATAAACCCATGATCAATTTCTTAATTAGCCGATATGGGACTCTTCAACAATCTATTTTAAATTTCGAACTTTTAAGTTGAAGAACATGCAAATTTTGAATTGCAGACTGGAGTACCCAGGAGTAGGACCAGAGCTGAGCTTCTTAAAAGAGAGTGGTAGAGCTGAATTTCACACAGCAATAGACAAAGAAGCGGTGGAAGCTTACAAACGGGTATGCAGATTGGAAGGCATTTTTCCATCATTGGAAGCTTCTCATGCCTTTGCTTATCTTGACAAGCTTTGCCCCACCCTAACTGACGGTTGCAAAGTGGTGGTCAACTGTAGCGGTCGTGGTGATAAAGATGCTGCAATTGTTTTCAACTATGGGCACCACCAAGAGTGCTAG

mRNA sequence

ATGGTGTATTTTGTTCGAGGGAAGGATTGTGCTCAAAATGGACATTATCATGATATGAATAGAGTTGTGATTCCTACAATAGTATTCGTGATTAATTTGGGTGTTGTGGCTGTGCAGGAGGAGCTGGAGGTGGCGCTGAGGGACTTTGTTGGGCGAGAGACGCCGCTGTATCACGCTGAGAGGCTGACAACGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTTGGGGCTGGCCAGCATGGTGGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGAGTGCACCATTTTGATGGCTGCTCTGACTATTCAAGAAGCAATCCTCAAATGTTGTCTTAATCAAGCTACTCGTGCTCAGGATGCGTCGTCGGAGGCGATAAGAGAGTGGGTCGGGGACTTGGAAACGAGCTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCTATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGACGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATAGAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGGTTTACCATGGAGCTTTGAGTTACCTTTTGCAAGATGAGGAAGGCCAAATCCTTGTTCCTCATTCCGTTGGTATAGGACTGGAGTACCCAGGAGTAGGACCAGAGCTGAGCTTCTTAAAAGAGAGTGGTAGAGCTGAATTTCACACAGCAATAGACAAAGAAGCGGTGGAAGCTTACAAACGGGTATGCAGATTGGAAGGCATTTTTCCATCATTGGAAGCTTCTCATGCCTTTGCTTATCTTGACAAGCTTTGCCCCACCCTAACTGACGGTTGCAAAGTGGTGGTCAACTGTAGCGGTCGTGGTGATAAAGATGCTGCAATTGTTTTCAACTATGGGCACCACCAAGAGTGCTAG

Coding sequence (CDS)

ATGGTGTATTTTGTTCGAGGGAAGGATTGTGCTCAAAATGGACATTATCATGATATGAATAGAGTTGTGATTCCTACAATAGTATTCGTGATTAATTTGGGTGTTGTGGCTGTGCAGGAGGAGCTGGAGGTGGCGCTGAGGGACTTTGTTGGGCGAGAGACGCCGCTGTATCACGCTGAGAGGCTGACAACGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTTGGGGCTGGCCAGCATGGTGGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGAGTGCACCATTTTGATGGCTGCTCTGACTATTCAAGAAGCAATCCTCAAATGTTGTCTTAATCAAGCTACTCGTGCTCAGGATGCGTCGTCGGAGGCGATAAGAGAGTGGGTCGGGGACTTGGAAACGAGCTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCTATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGACGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATAGAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGGTTTACCATGGAGCTTTGAGTTACCTTTTGCAAGATGAGGAAGGCCAAATCCTTGTTCCTCATTCCGTTGGTATAGGACTGGAGTACCCAGGAGTAGGACCAGAGCTGAGCTTCTTAAAAGAGAGTGGTAGAGCTGAATTTCACACAGCAATAGACAAAGAAGCGGTGGAAGCTTACAAACGGGTATGCAGATTGGAAGGCATTTTTCCATCATTGGAAGCTTCTCATGCCTTTGCTTATCTTGACAAGCTTTGCCCCACCCTAACTGACGGTTGCAAAGTGGTGGTCAACTGTAGCGGTCGTGGTGATAAAGATGCTGCAATTGTTTTCAACTATGGGCACCACCAAGAGTGCTAG

Protein sequence

MVYFVRGKDCAQNGHYHDMNRVVIPTIVFVINLGVVAVQEELEVALRDFVGRETPLYHAERLTTHGAEACGCRHLGLASMVVATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC
Homology
[Close]
BLAST of Carg26539 vs. NCBI nr
Match: XP_022954968.1 (tryptophan synthase beta chain 1-like [Cucurbita moschata])

HSP 1 Score: 521.2 bits (1341), Expect = 2.8e-144
Identity = 273/357 (76.47%), Postives = 283/357 (79.27%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CGCRHL------- 98
           QEELEVALRDFVGRETPLY+AERLT H       G E          CG   +       
Sbjct: 104 QEELEVALRDFVGRETPLYYAERLTRHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 163

Query: 99  ---------------GLASMVVATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
                          G     VATAAACAKHDLECTI M +  I++      L +   AQ
Sbjct: 164 MIAKRMGRRRVVAATGAGQHGVATAAACAKHDLECTIFMGSEDIKKQSSNVVLIKLLGAQ 223

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIREWVG+LE SYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME
Sbjct: 224 VKSVEGNFKDASSEAIREWVGNLERSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 283

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGGLPDVLVACIGSGSNALGLFNEFI EEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 284 KWGGLPDVLVACIGSGSNALGLFNEFINEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 343

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQILVPHSVG+GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR
Sbjct: 344 YHGALSYLLQDDEGQILVPHSVGVGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 403

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC 349
           VCRLEGIFPSLEASHAFAYLD+LCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC
Sbjct: 404 VCRLEGIFPSLEASHAFAYLDELCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC 460

[Close]
BLAST of Carg26539 vs. NCBI nr
Match: XP_023542665.1 (tryptophan synthase beta chain 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 271/357 (75.91%), Postives = 283/357 (79.27%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CGCRHL------- 98
           QEELEVALRDFVGRETPLYHAERLT +       G E          CG   +       
Sbjct: 104 QEELEVALRDFVGRETPLYHAERLTKYYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 163

Query: 99  ---------------GLASMVVATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
                          G     VATAAACAKHDLECTI M +  I++      L +   AQ
Sbjct: 164 MIAKRMGRRRVVAATGAGQHGVATAAACAKHDLECTIFMGSEDIKKQSSNVVLIKLLGAQ 223

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIREWVG+LE SYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME
Sbjct: 224 VKSVEGNFKDASSEAIREWVGNLEMSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 283

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGGLP+VLVACIGSGSNALGLFNEF+ EEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 284 KWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 343

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQILVPHSVG+GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR
Sbjct: 344 YHGALSYLLQDDEGQILVPHSVGVGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 403

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC 349
           VC+LEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC
Sbjct: 404 VCKLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQEC 460

[Close]
BLAST of Carg26539 vs. NCBI nr
Match: XP_022954970.1 (tryptophan synthase beta chain 1-like [Cucurbita moschata])

HSP 1 Score: 510.8 bits (1314), Expect = 3.8e-141
Identity = 270/351 (76.92%), Postives = 279/351 (79.49%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CGCRHL------- 98
           QEELEVALRDFVGRETPLYHAERLT +       G E          CG   +       
Sbjct: 103 QEELEVALRDFVGRETPLYHAERLTKYYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 162

Query: 99  ---------------GLASMVVATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
                          G     VATAAACAKHDLECTILM +  I++      L +   AQ
Sbjct: 163 MIAKRMGRRRVVAATGAGQHGVATAAACAKHDLECTILMGSEDIKKQSSNVVLIKLLGAQ 222

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME
Sbjct: 223 VKSVEGNFKDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 282

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGGLPDVLVACIGSGSNALGLFNEFI+EEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 283 KWGGLPDVLVACIGSGSNALGLFNEFIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 342

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQILVPHSVG+GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR
Sbjct: 343 YHGALSYLLQDDEGQILVPHSVGVGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 402

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           VCRLEGIFPSLEASHAFAYLDKLCPTL DGCKVVVNCSGRGDKDAAIVFNY
Sbjct: 403 VCRLEGIFPSLEASHAFAYLDKLCPTLRDGCKVVVNCSGRGDKDAAIVFNY 453

[Close]
BLAST of Carg26539 vs. NCBI nr
Match: XP_022994295.1 (tryptophan synthase beta chain 1-like [Cucurbita maxima])

HSP 1 Score: 504.6 bits (1298), Expect = 2.7e-139
Identity = 267/351 (76.07%), Postives = 275/351 (78.35%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CGCRHL------- 98
           QEELEVALRDFVGRETPLYHAERLT H       G E          CG   +       
Sbjct: 103 QEELEVALRDFVGRETPLYHAERLTRHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 162

Query: 99  ---------------GLASMVVATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
                          G     VATAAACAKHDLECTI M +  I++      L     AQ
Sbjct: 163 MIAKRMGRRRVVAATGAGQHGVATAAACAKHDLECTIFMGSEDIKKQSSNVVLINLLGAQ 222

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIREWVG+LE SYYL GTVVGPHPCPAMVREFQSVIGKETRKQAME
Sbjct: 223 VKSVEGNFKDASSEAIREWVGNLEMSYYLMGTVVGPHPCPAMVREFQSVIGKETRKQAME 282

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGGLPDVLVACIGSGSNALGLFNEFI+EEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 283 KWGGLPDVLVACIGSGSNALGLFNEFIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 342

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQDEEGQILVPHSVG+GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR
Sbjct: 343 YHGALSYLLQDEEGQILVPHSVGVGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 402

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           VC+LEGIFPSLEASHAFAYLDKLCPTL DGCKVVVNCSGRGDKDAAIVFNY
Sbjct: 403 VCKLEGIFPSLEASHAFAYLDKLCPTLRDGCKVVVNCSGRGDKDAAIVFNY 453

[Close]
BLAST of Carg26539 vs. NCBI nr
Match: XP_008441364.1 (PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 254/356 (71.35%), Postives = 274/356 (76.97%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CG----------- 98
           QEELEVALRDFVGRETPLY+AERLT H       G E          CG           
Sbjct: 100 QEELEVALRDFVGRETPLYYAERLTKHYKNEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 159

Query: 99  --CRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRA- 158
              + +G  S+V         VATAAACAKHDL+CTI M +  I +      L +   A 
Sbjct: 160 MIAKRMGRKSVVAATGAGQHGVATAAACAKHDLDCTIFMGSEDINKQSSNVLLIKLLGAK 219

Query: 159 --------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                   +DASSEAIREWVG+LETSYYLTGTVVGP+PCPAMVREFQSVIGKETR+QA E
Sbjct: 220 VKSVEGNFKDASSEAIREWVGNLETSYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKE 279

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWG  PDVL+ACIGSGSNALGLF+EFI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 280 KWGAKPDVLLACIGSGSNALGLFHEFINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 339

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQIL PHSVG+GLEYPGVGPELSFLKESGRAEF TA D EAVEAYKR
Sbjct: 340 YHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKESGRAEFETASDTEAVEAYKR 399

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQE 348
           + +LEGIFPSLEASHAFAYL KLCPTL DGCKVVVNCSGRGDKDAAIVFNY  HQ+
Sbjct: 400 LAKLEGIFPSLEASHAFAYLHKLCPTLPDGCKVVVNCSGRGDKDAAIVFNY--HQQ 453

[Close]
BLAST of Carg26539 vs. TAIR10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein)

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-112
Identity = 214/355 (60.28%), Postives = 250/355 (70.42%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTHG-------------------------------- 98
           QEEL  ALRD+VGRETPLY AERLT H                                 
Sbjct: 105 QEELTTALRDYVGRETPLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNAL 164

Query: 99  AEACGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQAT 158
           A+A   R LG + +V         VATAAACAK  LECT+ M A  I++        +  
Sbjct: 165 AQAMISRRLGCSRVVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLL 224

Query: 159 RAQ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
            AQ         DASSEAIR WV +L T+YYL+GTVVGPHPCP +VREFQSVIGKETR+Q
Sbjct: 225 GAQVISVEGTFKDASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQ 284

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           A + WGG PDVLVAC+GSGSNALGLF+EF+ +EDVRL+GVEAAG GLDSGKHSATL+ G 
Sbjct: 285 AKQLWGGKPDVLVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGD 344

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGVYHG++SYLLQD++GQIL PHSVG+GLEYPGVGPE+SF+KE+GRAEF+TA D+EA++A
Sbjct: 345 VGVYHGSMSYLLQDDQGQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQA 404

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYG 344
             R+ RLEGI P+LEASHA A+LDKL PTL DG KVVVNCSGRGDKD   +   G
Sbjct: 405 CMRLSRLEGIIPALEASHALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLIQRG 459

[Close]
BLAST of Carg26539 vs. TAIR10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1)

HSP 1 Score: 365.2 bits (936), Expect = 4.6e-101
Identity = 189/354 (53.39%), Postives = 239/354 (67.51%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-----------------------------GAEA 98
           Q EL   L+D+VGRE+PLY AERLT H                              A+A
Sbjct: 114 QRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 173

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + LG   ++         VATA  CA+  LEC I M A  ++   L     +   A+
Sbjct: 174 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAE 233

Query: 159 ------------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
                       DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVR+F +VIGKETRKQ
Sbjct: 234 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 293

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           A+EKWGG PDVLVAC+G GSNA+GLF+EF+ + +VR+IGVEAAGFGLDSGKH+ATL+KG 
Sbjct: 294 ALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGD 353

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HGA+SYLLQD++GQI+ PHS+  GL+YPGVGPE SF K+ GRAE+++  D+EA+EA
Sbjct: 354 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEA 413

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA AYL+KLCPTL+DG +VV+N SGRGDKD   V  Y
Sbjct: 414 FKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKY 467

[Close]
BLAST of Carg26539 vs. TAIR10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2)

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-100
Identity = 188/354 (53.11%), Postives = 238/354 (67.23%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-----------------------------GAEA 98
           Q EL   L+D+VGRE+PLY AERLT H                              A+A
Sbjct: 119 QRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 178

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + LG   ++         VATA  CA+  L+C I M A  ++   L     +   A+
Sbjct: 179 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAE 238

Query: 159 ------------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
                       DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVR+F +VIGKETRKQ
Sbjct: 239 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 298

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           AMEKWGG PDVLVAC+G GSNA+GLF+EF+++ +VR+IGVEAAGFGLDSGKH+ATL+KG 
Sbjct: 299 AMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGD 358

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HGA+SYLLQD++GQI+ PHS+  GL+YPGVGPE SFLK+ GRAE+ +  D+EA+EA
Sbjct: 359 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEA 418

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA A+L+KLCPTL DG +VV+N SGRGDKD      Y
Sbjct: 419 FKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKY 472

[Close]
BLAST of Carg26539 vs. TAIR10
Match: AT5G38530.1 (tryptophan synthase beta type 2)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 58/193 (30.05%), Postives = 85/193 (44.04%), Query Frame = 0 

Query: 122 ASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLV 181
           A SEA+     + +T Y L G+V+        V   Q++IG+E  +Q ME +G  PD+++
Sbjct: 263 AISEAVEVAARNEDTKYCL-GSVLN------HVLLHQTIIGEECIQQ-MENFGETPDLII 322

Query: 182 ACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKG----HVGVYHGALS 241
            C G GSN  GL   FI E   +L G               +L+KG      G   G   
Sbjct: 323 GCTGGGSNFAGLSFPFIRE---KLKGKINPVIRAVEPSACPSLTKGVYAYDFGDTAGLTP 382

Query: 242 YLLQDEEGQILVPHSVGI-GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCRLE 301
            +     G   +P  +   GL Y G+ P +S + E G  E  +    E  +   +  R E
Sbjct: 383 LMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIECFQGAIQFARTE 442

Query: 302 GIFPSLEASHAFA 310
           GI P+ E +HA A
Sbjct: 443 GIIPAPEPTHAIA 444

[Close]
BLAST of Carg26539 vs. Swiss-Prot
Match: sp|O50046|TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.3e-100
Identity = 189/347 (54.47%), Postives = 242/347 (69.74%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-----------------------------GAEA 98
           Q+EL+  L+D+VGRE+PLY AERLT H                              A+A
Sbjct: 110 QKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQA 169

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKC----CLNQA 158
              + LG   ++         VATA  CA+  L+C I M A  ++   L       L   
Sbjct: 170 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAE 229

Query: 159 TRA--------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
            RA        +DA+SEAIR+WV ++E+++Y+ G+V GPHP P MVREF +VIGKETRKQ
Sbjct: 230 VRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQ 289

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           A+EKWGG PDVLVAC+G GSNA+GLF+EF++++DVR+IGVEAAGFGLDSGKH+ATL+KG 
Sbjct: 290 ALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGE 349

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 336
           VGV HGA+SYLLQD++GQI+ PHS+  GL+YPGVGPE SFLK+ GRAE++   D+EA+EA
Sbjct: 350 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEA 409

[Close]
BLAST of Carg26539 vs. Swiss-Prot
Match: sp|P14671|TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 8.3e-100
Identity = 189/354 (53.39%), Postives = 239/354 (67.51%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-----------------------------GAEA 98
           Q EL   L+D+VGRE+PLY AERLT H                              A+A
Sbjct: 114 QRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 173

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + LG   ++         VATA  CA+  LEC I M A  ++   L     +   A+
Sbjct: 174 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAE 233

Query: 159 ------------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
                       DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVR+F +VIGKETRKQ
Sbjct: 234 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 293

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           A+EKWGG PDVLVAC+G GSNA+GLF+EF+ + +VR+IGVEAAGFGLDSGKH+ATL+KG 
Sbjct: 294 ALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGD 353

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HGA+SYLLQD++GQI+ PHS+  GL+YPGVGPE SF K+ GRAE+++  D+EA+EA
Sbjct: 354 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEA 413

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA AYL+KLCPTL+DG +VV+N SGRGDKD   V  Y
Sbjct: 414 FKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKY 467

[Close]
BLAST of Carg26539 vs. Swiss-Prot
Match: sp|P25269|TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2)

HSP 1 Score: 363.6 bits (932), Expect = 2.4e-99
Identity = 188/354 (53.11%), Postives = 238/354 (67.23%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-----------------------------GAEA 98
           Q EL   L+D+VGRE+PLY AERLT H                              A+A
Sbjct: 119 QRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 178

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + LG   ++         VATA  CA+  L+C I M A  ++   L     +   A+
Sbjct: 179 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAE 238

Query: 159 ------------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
                       DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVR+F +VIGKETRKQ
Sbjct: 239 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 298

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           AMEKWGG PDVLVAC+G GSNA+GLF+EF+++ +VR+IGVEAAGFGLDSGKH+ATL+KG 
Sbjct: 299 AMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGD 358

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HGA+SYLLQD++GQI+ PHS+  GL+YPGVGPE SFLK+ GRAE+ +  D+EA+EA
Sbjct: 359 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEA 418

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA A+L+KLCPTL DG +VV+N SGRGDKD      Y
Sbjct: 419 FKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKY 472

[Close]
BLAST of Carg26539 vs. Swiss-Prot
Match: sp|P43283|TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-99
Identity = 187/354 (52.82%), Postives = 238/354 (67.23%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTHGAEACG--------------------------- 98
           Q+EL+  L+D+VGRE+PLY AERLT H   A G                           
Sbjct: 33  QKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHRGAHKINNAVAQA 92

Query: 99  --CRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKC----CLNQA 158
              + LG   ++         VATA  CA+  L+C I M A  ++   L       L   
Sbjct: 93  LLAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMKLLGAE 152

Query: 159 TRA--------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
            RA        +DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVREF  VIGKETR+Q
Sbjct: 153 VRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQ 212

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           AM KWGG PDVLVAC+G GSNA+GLF+EF+E++DVRLIGVEAAG G+D+ KH+ATL+KG 
Sbjct: 213 AMHKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQ 272

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HG++SYLLQD++GQ++ PHS+  GL+YPGVGPE SFLK+ GRAE+ +  D+EA++A
Sbjct: 273 VGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDA 332

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA AYL+KLCPTL DG +VV+NCSGRGDKD      Y
Sbjct: 333 FKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVLNCSGRGDKDVHTASKY 386

[Close]
BLAST of Carg26539 vs. Swiss-Prot
Match: sp|P43284|TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.1e-99
Identity = 185/354 (52.26%), Postives = 238/354 (67.23%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTHGAEACG--------------------------- 98
           Q+EL+  L+D+VGRE+PLY AERLT H   A G                           
Sbjct: 87  QKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQA 146

Query: 99  --CRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKC----CLNQA 158
              + LG   ++         VATA  C +  L+C I M A  ++   L       L   
Sbjct: 147 LLAKRLGKQRIIAETGAGQHGVATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLLGAE 206

Query: 159 TRA--------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQ 218
            RA        +DA+SEAIR+WV ++ET++Y+ G+V GPHP P MVREF  VIGKETR+Q
Sbjct: 207 VRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQ 266

Query: 219 AMEKWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGH 278
           AM+KWGG PDVLVAC+G GSNA+GLF+EF+E++DVRL+G+EAAG G+D+ KH+ATL+KG 
Sbjct: 267 AMDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQ 326

Query: 279 VGVYHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEA 338
           VGV HG++SYLLQD++GQ++ PHS+  GL+YPGVGPE SFLK+ GRAE+ +  D+EA++A
Sbjct: 327 VGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDA 386

Query: 339 YKRVCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNY 343
           +KRV RLEGI P+LE SHA AYL+KLCPTL DG +VVVNCSGRGDKD      Y
Sbjct: 387 FKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKY 440

[Close]
BLAST of Carg26539 vs. TrEMBL
Match: tr|A0A1S3B3A1|A0A1S3B3A1_CUCME (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 7.5e-130
Identity = 254/356 (71.35%), Postives = 274/356 (76.97%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CG----------- 98
           QEELEVALRDFVGRETPLY+AERLT H       G E          CG           
Sbjct: 100 QEELEVALRDFVGRETPLYYAERLTKHYKNEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 159

Query: 99  --CRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRA- 158
              + +G  S+V         VATAAACAKHDL+CTI M +  I +      L +   A 
Sbjct: 160 MIAKRMGRKSVVAATGAGQHGVATAAACAKHDLDCTIFMGSEDINKQSSNVLLIKLLGAK 219

Query: 159 --------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                   +DASSEAIREWVG+LETSYYLTGTVVGP+PCPAMVREFQSVIGKETR+QA E
Sbjct: 220 VKSVEGNFKDASSEAIREWVGNLETSYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKE 279

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWG  PDVL+ACIGSGSNALGLF+EFI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 280 KWGAKPDVLLACIGSGSNALGLFHEFINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 339

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQIL PHSVG+GLEYPGVGPELSFLKESGRAEF TA D EAVEAYKR
Sbjct: 340 YHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKESGRAEFETASDTEAVEAYKR 399

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHHQE 348
           + +LEGIFPSLEASHAFAYL KLCPTL DGCKVVVNCSGRGDKDAAIVFNY  HQ+
Sbjct: 400 LAKLEGIFPSLEASHAFAYLHKLCPTLPDGCKVVVNCSGRGDKDAAIVFNY--HQQ 453

[Close]
BLAST of Carg26539 vs. TrEMBL
Match: tr|A0A0A0LUA1|A0A0A0LUA1_CUCSA (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.2e-129
Identity = 252/354 (71.19%), Postives = 273/354 (77.12%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTH-------GAEA---------CG----------- 98
           QEELEVALRDFVGRETPLY+AERLT H       G E          CG           
Sbjct: 100 QEELEVALRDFVGRETPLYYAERLTKHYKNEEGKGPEIYIKREDLNHCGAHKMNNAIAQV 159

Query: 99  --CRHLGLASMV---------VATAAACAKHDLECTILMAALTIQE----AILKCCLNQA 158
              + +G  S+V         VATAAACAKHDL+CTI M    I++     +L   L   
Sbjct: 160 MIAKRMGRKSVVAATGAGQHGVATAAACAKHDLDCTIFMGTEDIKKQSSNVLLIKMLGAK 219

Query: 159 TRA-----QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
            +A     +DASSEAIR WVG+LETSYYLTGTVVGPHPCPAMVREFQSVIGKETR+QAME
Sbjct: 220 VKAVEGNFKDASSEAIRGWVGNLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRRQAME 279

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWG  PDVL+ACIGSGSNALGLF+EFI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGV
Sbjct: 280 KWGAKPDVLLACIGSGSNALGLFHEFINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 339

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGALSYLLQD+EGQIL PHSVG+GLEYPGVGPELSFLK+SGRAEF TA D EAVEAYK 
Sbjct: 340 YHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKDSGRAEFETASDTEAVEAYKL 399

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHH 346
           + +LEGIFP+LEASHAFAYL KLCPTL DGCKVVVNCSGRGDKDAAIVFNY  H
Sbjct: 400 LAKLEGIFPALEASHAFAYLHKLCPTLPDGCKVVVNCSGRGDKDAAIVFNYHQH 453

[Close]
BLAST of Carg26539 vs. TrEMBL
Match: tr|A0A1R3I2E8|A0A1R3I2E8_COCAP (Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15455 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.9e-121
Identity = 230/353 (65.16%), Postives = 266/353 (75.35%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTHG-----------------------------AEA 98
           QEEL  ALRD+VGRETPLY AERLT H                              A+A
Sbjct: 116 QEELRTALRDYVGRETPLYFAERLTNHYKNNNGEGPEIYLKREDLNHVGAHKINNAIAQA 175

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + +G  S+V         VATAAACAK DLECTI M A  +++      L +   AQ
Sbjct: 176 MIAKRMGRTSIVAATGAGQHGVATAAACAKLDLECTIYMGAADMEKQSSNVLLMKLLGAQ 235

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIR WVGDLE SYYLTGTVVGPHPCP+MVREFQSVIGKETR+QAM+
Sbjct: 236 VKTVEGSFKDASSEAIRGWVGDLENSYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAMD 295

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGG PDVLVACIGSGSNALGLF+EFI ++DVRLIGVEAAGFGLDSGKH+AT+++G VGV
Sbjct: 296 KWGGKPDVLVACIGSGSNALGLFHEFINDQDVRLIGVEAAGFGLDSGKHAATIARGEVGV 355

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGA+SYLLQDEEGQIL PHS+G+GLEYPGVGPE+S+LKE+GRAEFH+A D+EAV+AY+R
Sbjct: 356 YHGAMSYLLQDEEGQILGPHSIGVGLEYPGVGPEVSYLKETGRAEFHSATDQEAVDAYRR 415

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGH 345
           +C+LEGIFP+LEASHA A+L+KLCPTL +G KVVVN SGRGDKDA  VF+Y H
Sbjct: 416 LCKLEGIFPALEASHALAFLEKLCPTLANGTKVVVNISGRGDKDADRVFHYKH 468

[Close]
BLAST of Carg26539 vs. TrEMBL
Match: tr|A0A1R3I2K9|A0A1R3I2K9_COCAP (Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15456 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 4.9e-121
Identity = 230/353 (65.16%), Postives = 266/353 (75.35%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLTTHG-----------------------------AEA 98
           QEEL  ALRD++GRETPLY AERLT H                              A+A
Sbjct: 90  QEELRTALRDYIGRETPLYFAERLTNHYQNSNGEGPEIYLKREDLNHVGAHKINNAIAQA 149

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRAQ 158
              + +G  S+V         VATAAACAK DLECTI M A  +++      L +   AQ
Sbjct: 150 MIAKRMGRTSIVAATGAGQHGVATAAACAKLDLECTIYMGATDMEKQSSNVLLMKLLGAQ 209

Query: 159 ---------DASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                    DASSEAIR WVG+LETSYYLTGTVVGPHPCP+MVREFQSVIGKETR+QAME
Sbjct: 210 VKSVEGSFKDASSEAIRGWVGNLETSYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAME 269

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGG PDVLVACIGSGSNALGLF+EFI ++DVRLIGVEAAGFGLDSGKH+AT+++G VGV
Sbjct: 270 KWGGKPDVLVACIGSGSNALGLFHEFINDQDVRLIGVEAAGFGLDSGKHAATIARGDVGV 329

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGA+SYLLQDEEGQIL PHS+G+GLEYPGVGPE+SFLKE+GRAEF+TA D+EAV+AY+R
Sbjct: 330 YHGAMSYLLQDEEGQILGPHSIGVGLEYPGVGPEVSFLKETGRAEFYTATDQEAVDAYRR 389

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGH 345
           +C+LEGI P+LEASHA A+L+KLCPTL +G KVVVN SGRGDKDA IVF + H
Sbjct: 390 LCKLEGIIPALEASHALAFLEKLCPTLANGTKVVVNISGRGDKDADIVFQFKH 442

[Close]
BLAST of Carg26539 vs. TrEMBL
Match: tr|A0A061GGU3|A0A061GGU3_THECC (Tryptophan synthase OS=Theobroma cacao OX=3641 GN=TCM_030179 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 9.2e-120
Identity = 228/354 (64.41%), Postives = 268/354 (75.71%), Query Frame = 0 

Query: 39  QEELEVALRDFVGRETPLYHAERLT--------------------THG---------AEA 98
           QEEL  ALRD+VGRETPLY A+RLT                    +HG         A+A
Sbjct: 107 QEELTTALRDYVGRETPLYFAQRLTDHYKNSRGEGPEIYLKREDLSHGGAHKINNAIAQA 166

Query: 99  CGCRHLGLASMV---------VATAAACAKHDLECTILMAALTIQEAILKCCLNQATRA- 158
              + +G  ++V         VATAAACAK  LECTI M A  +++      L +   A 
Sbjct: 167 MIAKRMGRKTIVAATGAGQHGVATAAACAKLSLECTIFMGATDMEKQASNVLLMKLLGAK 226

Query: 159 --------QDASSEAIREWVGDLETSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAME 218
                   ++ASS+AIREWVG+LETSYYLTGTVVGPHPCP+MVREFQSVIGKETR+QAME
Sbjct: 227 VESVEGAFKEASSQAIREWVGNLETSYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAME 286

Query: 219 KWGGLPDVLVACIGSGSNALGLFNEFIEEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGV 278
           KWGG PDVLVACIGSGSNALGLF+EFI +EDVRLIGVEAAGFGLDSG+HSATL++G VGV
Sbjct: 287 KWGGKPDVLVACIGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGRHSATLARGDVGV 346

Query: 279 YHGALSYLLQDEEGQILVPHSVGIGLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKR 338
           YHGA+SYLLQD EGQIL PHS+G+GLEYPGVGPE+SFLKE+GRAEFH+A D+EA++AY+R
Sbjct: 347 YHGAMSYLLQDAEGQILGPHSIGVGLEYPGVGPEVSFLKETGRAEFHSATDQEAIDAYRR 406

Query: 339 VCRLEGIFPSLEASHAFAYLDKLCPTLTDGCKVVVNCSGRGDKDAAIVFNYGHH 346
           +C+LEGIFP+LEASHA A+L+KLCPTL +G KVVVN SGRGDKD+ IVF Y  H
Sbjct: 407 LCKLEGIFPALEASHALAFLEKLCPTLANGTKVVVNISGRGDKDSDIVFQYKPH 460

The following BLAST results are available for this feature:
BLAST of Carg26539 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954968.12.8e-14476.47tryptophan synthase beta chain 1-like [Cucurbita moschata][more]
XP_023542665.11.4e-14375.91tryptophan synthase beta chain 1-like [Cucurbita pepo subsp. pepo][more]
XP_022954970.13.8e-14176.92tryptophan synthase beta chain 1-like [Cucurbita moschata][more]
XP_022994295.12.7e-13976.07tryptophan synthase beta chain 1-like [Cucurbita maxima][more]
XP_008441364.11.1e-12971.35PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo][more]
BLAST of Carg26539 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G28237.11.2e-11260.28Pyridoxal-5'-phosphate-dependent enzyme family protein[more]
AT5G54810.14.6e-10153.39tryptophan synthase beta-subunit 1[more]
AT4G27070.11.3e-10053.11tryptophan synthase beta-subunit 2[more]
AT5G38530.11.7e-1030.05tryptophan synthase beta type 2[more]
BLAST of Carg26539 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O50046|TRPB_CAMAC1.3e-10054.47Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=1692... [more]
sp|P14671|TRPB1_ARATH8.3e-10053.39Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P25269|TRBP2_ARATH2.4e-9953.11Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P43283|TRPB1_MAIZE3.2e-9952.82Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=... [more]
sp|P43284|TRPB2_MAIZE7.1e-9952.26Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 G... [more]
BLAST of Carg26539 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B3A1|A0A1S3B3A1_CUCME7.5e-13071.35Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1[more]
tr|A0A0A0LUA1|A0A0A0LUA1_CUCSA2.2e-12971.19Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1[more]
tr|A0A1R3I2E8|A0A1R3I2E8_COCAP2.9e-12165.16Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15455 PE=3 SV=1[more]
tr|A0A1R3I2K9|A0A1R3I2K9_COCAP4.9e-12165.16Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15456 PE=3 SV=1[more]
tr|A0A061GGU3|A0A061GGU3_THECC9.2e-12064.41Tryptophan synthase OS=Theobroma cacao OX=3641 GN=TCM_030179 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006568tryptophan metabolic process
GO:0000162tryptophan biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004834tryptophan synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR006654Trp_synth_beta
IPR001926PLP-dep
IPR023026Trp_synth_beta/beta-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006568 tryptophan metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004834 tryptophan synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26539-RACarg26539-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 35..154
e-value: 3.4E-22
score: 81.0
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 155..347
e-value: 4.5E-74
score: 250.8
NoneNo IPR availablePANTHERPTHR42882:SF2TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEINcoord: 36..68
NoneNo IPR availablePANTHERPTHR42882:SF2TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEINcoord: 81..345
IPR023026Tryptophan synthase beta chain/beta chain-likePIRSFPIRSF001413Trp_syn_betacoord: 34..69
e-value: 0.079
score: 10.0
coord: 80..347
e-value: 6.9E-77
score: 257.2
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 81..330
e-value: 1.7E-18
score: 66.9
IPR006654Tryptophan synthase, beta chainPANTHERPTHR42882FAMILY NOT NAMEDcoord: 36..68
IPR006654Tryptophan synthase, beta chainPANTHERPTHR42882FAMILY NOT NAMEDcoord: 81..345
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILYSSF53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 34..340