Bhi08G001456 (gene) Wax gourd

NameBhi08G001456
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionTryptophan synthase beta chain
Locationchr8 : 51579091 .. 51580518 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGTAAGAAAAAAAACACCACTCTTAAAAAATATAGCAAAATTTAGATTCAACATTTGAAATCTATCTTGAATAGACTATATATATCACTAATAAGAGTTTATTATTAGTAAGATACACTAATTTACTATATCCTTTATGATTAATTCTTTCAAAATATTGATATGCACTTTTTAATTAACCCTAAAAGTAATATCTTTTGCATTTTTTTCCTTCTTTAATAAATGAAAATGAAAACTTATATATTACCAATAAATTCCAAAATTTATAATATACTGTTCTGGATTTTGTAAATCTTCTATTGAATTTTGTTGTTTGTTATCATTTCAAAAGGATTGATTTGAAATATGAAGTGATGTCACATCATATTTTTATATAGAAAAAATGCTCCTCTAGAATGGGCAGGATTTAAATTTAAAATTTGAAGACATACTTAACTAGCATCATTTGATTATATAACTATTTGGTTTTTTTAGTTTTAGTTTTTAGAAATGGTGCATATTTTCAAAGCTATGCAGACAACAAAATTTAGAAAGGAGCAAATGAAACTAGTATTGACTATAGAATTTAAATTTCAAATAACAAATAATTAATTATCAAATTGAGCCTAATTAGTAGATTTTCGAAACAAAAACTGAGATTCATTTCTGGAACATTCTTAATTACATTTAGGTGAGGGATATCGTCTTTGAATACACATTAATTAGAATTAATTGAGGTGTGCTCAATTTCGCATTAAATGGAGATAATTAGGCTTATCAAGATTTTAACAAGTTAGGAAAAGTAATTTGATCGATGGTGGTATTGAAATTGAACGCGCAGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

mRNA sequence

ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

Coding sequence (CDS)

ATGAGCTATTATTTGACGGGCACAGTGGTAGGGCCGCATCCATGTCCAGATATGGTTAGGGAGTTTCAGTCCGTGATTGGGAAAGAGACGAGGAGACAAGCCATGGACAAATGGGGGGGCAAACCAGATGTGCTTTTGGCTTGCATTGGGAGTGGCTCAAATGCCTTGGGTCTCTTCCATGACTTCATCAAAGAACAAGATGTGAGGCTGATCGGAGTCGAGGCCGCCGGCTTTGGGTTGGACAGTGGAAAGCACTCTGCAACTTTATCTAAAGGTCATGTTGGGGTTTACCATGGTGCTTTGAGCTACCTTTTGCAAGATGATGAAGGCCAGATTTTGAACCCTCATTCCGTTGGTGTAGGGCTGGAATATCCAGGAGTAGGGCCGGAACTGAGCTTTCTGAAAGAAAGTGGGAGAGCTGAATTCCACACGGCGTCCGACACGGAGGCGGTAGAAGCTTACAAACGGCTTTGCAAGTTGGAAGGCATATTCCCATCGTTGGAGGCTTCTCATGCCTTTGCTTATCTTAATAAGCTTTGCCCCACTCTGCCAGACGGCTCCAAGGTGGTAGTTAATTGCAGTGGTCGTGGTGATAAAGACGCTGCTATT

Protein sequence

MSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHDFIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVGLEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCPTLPDGSKVVVNCSGRGDKDAAI
BLAST of Bhi08G001456 vs. Swiss-Prot
Match: sp|O50046|TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.6e-87
Identity = 142/199 (71.36%), Postives = 177/199 (88.94%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 258 THYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 317

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ ++DVR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 318 FVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAG 377

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE++  +D EA+EA+KRL +LEGI P+LE SHA A+L KLCP
Sbjct: 378 LDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCP 437

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLP+G+KVV+NCSGRGDKD
Sbjct: 438 TLPNGTKVVLNCSGRGDKD 456

BLAST of Bhi08G001456 vs. Swiss-Prot
Match: sp|P43283|TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.0e-85
Identity = 139/199 (69.85%), Postives = 173/199 (86.93%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF  VIGKETRRQAM KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 181 THYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHE 240

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+++QDVRLIGVEAAG G+D+ KH+ATL+KG VGV HG++SYLLQDD+GQ++ PHS+  G
Sbjct: 241 FVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAG 300

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA++A+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 301 LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCP 360

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG +VV+NCSGRGDKD
Sbjct: 361 TLPDGVRVVLNCSGRGDKD 379

BLAST of Bhi08G001456 vs. Swiss-Prot
Match: sp|P43284|TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85
Identity = 138/199 (69.35%), Postives = 173/199 (86.93%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVREF  VIGKETRRQAMDKWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 235 THYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHE 294

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+++QDVRL+G+EAAG G+D+ KH+ATL+KG VGV HG++SYLLQDD+GQ++ PHS+  G
Sbjct: 295 FVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAG 354

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA++A+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 355 LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCP 414

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG +VVVNCSGRGDKD
Sbjct: 415 TLADGVRVVVNCSGRGDKD 433

BLAST of Bhi08G001456 vs. Swiss-Prot
Match: sp|P25269|TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 4.4e-85
Identity = 139/199 (69.85%), Postives = 175/199 (87.94%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QAM+KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 267 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHE 326

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 327 FVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 386

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA+EA+KR+ +LEGI P+LE SHA A+L KLCP
Sbjct: 387 LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCP 446

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG++VV+N SGRGDKD
Sbjct: 447 TLPDGARVVLNFSGRGDKD 465

BLAST of Bhi08G001456 vs. Swiss-Prot
Match: sp|P14671|TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-84
Identity = 137/199 (68.84%), Postives = 174/199 (87.44%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 262 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 321

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 322 FVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 381

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SF K+ GRAE+++ +D EA+EA+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 382 LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCP 441

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG++VV+N SGRGDKD
Sbjct: 442 TLSDGTRVVLNFSGRGDKD 460

BLAST of Bhi08G001456 vs. TAIR10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein)

HSP 1 Score: 340.1 bits (871), Expect = 9.3e-94
Identity = 156/199 (78.39%), Postives = 182/199 (91.46%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           +YYL+GTVVGPHPCP +VREFQSVIGKETRRQA   WGGKPDVL+AC+GSGSNALGLFH+
Sbjct: 253 TYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVGSGSNALGLFHE 312

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ ++DVRL+GVEAAG GLDSGKHSATL+ G VGVYHG++SYLLQDD+GQIL PHSVGVG
Sbjct: 313 FVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQGQILKPHSVGVG 372

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPE+SF+KE+GRAEF+TA+D EA++A  RL +LEGI P+LEASHA A+L+KL P
Sbjct: 373 LEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEASHALAFLDKLVP 432

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG+KVVVNCSGRGDKD
Sbjct: 433 TLRDGAKVVVNCSGRGDKD 451

BLAST of Bhi08G001456 vs. TAIR10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2)

HSP 1 Score: 315.5 bits (807), Expect = 2.4e-86
Identity = 139/199 (69.85%), Postives = 175/199 (87.94%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QAM+KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 267 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHE 326

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 327 FVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 386

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SFLK+ GRAE+ + +D EA+EA+KR+ +LEGI P+LE SHA A+L KLCP
Sbjct: 387 LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCP 446

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TLPDG++VV+N SGRGDKD
Sbjct: 447 TLPDGARVVLNFSGRGDKD 465

BLAST of Bhi08G001456 vs. TAIR10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1)

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-85
Identity = 137/199 (68.84%), Postives = 174/199 (87.44%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           ++Y+ G+V GPHP P MVR+F +VIGKETR+QA++KWGGKPDVL+AC+G GSNA+GLFH+
Sbjct: 262 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 321

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           F+ + +VR+IGVEAAGFGLDSGKH+ATL+KG VGV HGA+SYLLQDD+GQI+ PHS+  G
Sbjct: 322 FVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAG 381

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           L+YPGVGPE SF K+ GRAE+++ +D EA+EA+KR+ +LEGI P+LE SHA AYL KLCP
Sbjct: 382 LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCP 441

Query: 182 TLPDGSKVVVNCSGRGDKD 201
           TL DG++VV+N SGRGDKD
Sbjct: 442 TLSDGTRVVLNFSGRGDKD 460

BLAST of Bhi08G001456 vs. TAIR10
Match: AT5G38530.1 (tryptophan synthase beta type 2)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 0

Query: 23  QSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHDFIKEQDVRLIGVEAAGFGLDS 82
           Q++IG+E  +Q M+ +G  PD+++ C G GSN  GL   FI+E   +L G          
Sbjct: 292 QTIIGEECIQQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIRE---KLKGKINPVIRAVE 351

Query: 83  GKHSATLSKGHVGVYHGALSYLLQDDEG--QILNPHSVG----------VGLEYPGVGPE 142
                +L+K   GVY    +Y   D  G   ++  H++G           GL Y G+ P 
Sbjct: 352 PSACPSLTK---GVY----AYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPL 411

Query: 143 LSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFA 175
           +S + E G  E  +    E  +   +  + EGI P+ E +HA A
Sbjct: 412 ISHVYEQGFMEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIA 444

BLAST of Bhi08G001456 vs. TrEMBL
Match: tr|A0A1S3B3A1|A0A1S3B3A1_CUCME (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 5.2e-107
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGP+PCP MVREFQSVIGKETRRQA +KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEF TASDTEAVEAYKRL KLEGIFPSLEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKESGRAEFETASDTEAVEAYKRLAKLEGIFPSLEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

BLAST of Bhi08G001456 vs. TrEMBL
Match: tr|A0A0A0LUA1|A0A0A0LUA1_CUCSA (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.8e-107
Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAM+KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPHPCPAMVREFQSVIGKETRRQAMEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLK+SGRAEF TASDTEAVEAYK L KLEGIFP+LEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKDSGRAEFETASDTEAVEAYKLLAKLEGIFPALEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

BLAST of Bhi08G001456 vs. TrEMBL
Match: tr|A0A1R3I2E8|A0A1R3I2E8_COCAP (Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15455 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.8e-99
Identity = 170/200 (85.00%), Postives = 191/200 (95.50%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAMDKWGGKPDVL+ACIGSGSNALGLFH+
Sbjct: 261 SYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAMDKWGGKPDVLVACIGSGSNALGLFHE 320

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI +QDVRLIGVEAAGFGLDSGKH+AT+++G VGVYHGA+SYLLQD+EGQIL PHS+GVG
Sbjct: 321 FINDQDVRLIGVEAAGFGLDSGKHAATIARGEVGVYHGAMSYLLQDEEGQILGPHSIGVG 380

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPE+S+LKE+GRAEFH+A+D EAV+AY+RLCKLEGIFP+LEASHA A+L KLCP
Sbjct: 381 LEYPGVGPEVSYLKETGRAEFHSATDQEAVDAYRRLCKLEGIFPALEASHALAFLEKLCP 440

Query: 182 TLPDGSKVVVNCSGRGDKDA 202
           TL +G+KVVVN SGRGDKDA
Sbjct: 441 TLANGTKVVVNISGRGDKDA 460

BLAST of Bhi08G001456 vs. TrEMBL
Match: tr|A0A1R3I2K9|A0A1R3I2K9_COCAP (Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15456 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 170/202 (84.16%), Postives = 191/202 (94.55%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAM+KWGGKPDVL+ACIGSGSNALGLFH+
Sbjct: 235 SYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAMEKWGGKPDVLVACIGSGSNALGLFHE 294

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI +QDVRLIGVEAAGFGLDSGKH+AT+++G VGVYHGA+SYLLQD+EGQIL PHS+GVG
Sbjct: 295 FINDQDVRLIGVEAAGFGLDSGKHAATIARGDVGVYHGAMSYLLQDEEGQILGPHSIGVG 354

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPE+SFLKE+GRAEF+TA+D EAV+AY+RLCKLEGI P+LEASHA A+L KLCP
Sbjct: 355 LEYPGVGPEVSFLKETGRAEFYTATDQEAVDAYRRLCKLEGIIPALEASHALAFLEKLCP 414

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TL +G+KVVVN SGRGDKDA I
Sbjct: 415 TLANGTKVVVNISGRGDKDADI 436

BLAST of Bhi08G001456 vs. TrEMBL
Match: tr|A0A061GGU3|A0A061GGU3_THECC (Tryptophan synthase OS=Theobroma cacao OX=3641 GN=TCM_030179 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-98
Identity = 169/202 (83.66%), Postives = 191/202 (94.55%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAM+KWGGKPDVL+ACIGSGSNALGLFH+
Sbjct: 252 SYYLTGTVVGPHPCPSMVREFQSVIGKETRRQAMEKWGGKPDVLVACIGSGSNALGLFHE 311

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI ++DVRLIGVEAAGFGLDSG+HSATL++G VGVYHGA+SYLLQD EGQIL PHS+GVG
Sbjct: 312 FINDEDVRLIGVEAAGFGLDSGRHSATLARGDVGVYHGAMSYLLQDAEGQILGPHSIGVG 371

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPE+SFLKE+GRAEFH+A+D EA++AY+RLCKLEGIFP+LEASHA A+L KLCP
Sbjct: 372 LEYPGVGPEVSFLKETGRAEFHSATDQEAIDAYRRLCKLEGIFPALEASHALAFLEKLCP 431

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TL +G+KVVVN SGRGDKD+ I
Sbjct: 432 TLANGTKVVVNISGRGDKDSDI 453

BLAST of Bhi08G001456 vs. NCBI nr
Match: XP_008441364.1 (PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 7.9e-107
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGP+PCP MVREFQSVIGKETRRQA +KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPYPCPAMVREFQSVIGKETRRQAKEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEF TASDTEAVEAYKRL KLEGIFPSLEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKESGRAEFETASDTEAVEAYKRLAKLEGIFPSLEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

BLAST of Bhi08G001456 vs. NCBI nr
Match: XP_004145174.1 (PREDICTED: tryptophan synthase beta chain 1-like [Cucumis sativus] >KGN64544.1 hypothetical protein Csa_1G064170 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-106
Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETRRQAM+KWG KPDVLLACIGSGSNALGLFH+
Sbjct: 245 SYYLTGTVVGPHPCPAMVREFQSVIGKETRRQAMEKWGAKPDVLLACIGSGSNALGLFHE 304

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FI E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG
Sbjct: 305 FINEKDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 364

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLK+SGRAEF TASDTEAVEAYK L KLEGIFP+LEASHAFAYL+KLCP
Sbjct: 365 LEYPGVGPELSFLKDSGRAEFETASDTEAVEAYKLLAKLEGIFPALEASHAFAYLHKLCP 424

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TLPDG KVVVNCSGRGDKDAAI
Sbjct: 425 TLPDGCKVVVNCSGRGDKDAAI 446

BLAST of Bhi08G001456 vs. NCBI nr
Match: XP_022954970.1 (tryptophan synthase beta chain 1-like [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 4.3e-105
Identity = 186/202 (92.08%), Postives = 195/202 (96.53%), Query Frame = 0

Query: 2   SYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFHD 61
           SYYLTGTVVGPHPCP MVREFQSVIGKETR+QAM+KWGG PDVL+ACIGSGSNALGLF++
Sbjct: 248 SYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLVACIGSGSNALGLFNE 307

Query: 62  FIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGVG 121
           FIKE+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQIL PHSVGVG
Sbjct: 308 FIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILVPHSVGVG 367

Query: 122 LEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLCP 181
           LEYPGVGPELSFLKESGRAEFHTA D EAVEAYKR+C+LEGIFPSLEASHAFAYL+KLCP
Sbjct: 368 LEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCRLEGIFPSLEASHAFAYLDKLCP 427

Query: 182 TLPDGSKVVVNCSGRGDKDAAI 204
           TL DG KVVVNCSGRGDKDAAI
Sbjct: 428 TLRDGCKVVVNCSGRGDKDAAI 449

BLAST of Bhi08G001456 vs. NCBI nr
Match: XP_022994295.1 (tryptophan synthase beta chain 1-like [Cucurbita maxima])

HSP 1 Score: 389.4 bits (999), Expect = 7.4e-105
Identity = 186/203 (91.63%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFH 60
           MSYYL GTVVGPHPCP MVREFQSVIGKETR+QAM+KWGG PDVL+ACIGSGSNALGLF+
Sbjct: 247 MSYYLMGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPDVLVACIGSGSNALGLFN 306

Query: 61  DFIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGV 120
           +FIKE+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQD+EGQIL PHSVGV
Sbjct: 307 EFIKEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDEEGQILVPHSVGV 366

Query: 121 GLEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLC 180
           GLEYPGVGPELSFLKESGRAEFHTA D EAVEAYKR+CKLEGIFPSLEASHAFAYL+KLC
Sbjct: 367 GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCKLEGIFPSLEASHAFAYLDKLC 426

Query: 181 PTLPDGSKVVVNCSGRGDKDAAI 204
           PTL DG KVVVNCSGRGDKDAAI
Sbjct: 427 PTLRDGCKVVVNCSGRGDKDAAI 449

BLAST of Bhi08G001456 vs. NCBI nr
Match: XP_023542665.1 (tryptophan synthase beta chain 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 9.6e-105
Identity = 185/203 (91.13%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MSYYLTGTVVGPHPCPDMVREFQSVIGKETRRQAMDKWGGKPDVLLACIGSGSNALGLFH 60
           MSYYLTGTVVGPHPCP MVREFQSVIGKETR+QAM+KWGG P+VL+ACIGSGSNALGLF+
Sbjct: 248 MSYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFN 307

Query: 61  DFIKEQDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILNPHSVGV 120
           +F+ E+DVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQIL PHSVGV
Sbjct: 308 EFMNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGVYHGALSYLLQDDEGQILVPHSVGV 367

Query: 121 GLEYPGVGPELSFLKESGRAEFHTASDTEAVEAYKRLCKLEGIFPSLEASHAFAYLNKLC 180
           GLEYPGVGPELSFLKESGRAEFHTA D EAVEAYKR+CKLEGIFPSLEASHAFAYL+KLC
Sbjct: 368 GLEYPGVGPELSFLKESGRAEFHTAIDKEAVEAYKRVCKLEGIFPSLEASHAFAYLDKLC 427

Query: 181 PTLPDGSKVVVNCSGRGDKDAAI 204
           PTL DG KVVVNCSGRGDKDAAI
Sbjct: 428 PTLTDGCKVVVNCSGRGDKDAAI 450

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|O50046|TRPB_CAMAC1.6e-8771.36Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=1692... [more]
sp|P43283|TRPB1_MAIZE2.0e-8569.85Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=... [more]
sp|P43284|TRPB2_MAIZE3.4e-8569.35Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 G... [more]
sp|P25269|TRBP2_ARATH4.4e-8569.85Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P14671|TRPB1_ARATH2.2e-8468.84Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
AT5G28237.19.3e-9478.39Pyridoxal-5'-phosphate-dependent enzyme family protein[more]
AT4G27070.12.4e-8669.85tryptophan synthase beta-subunit 2[more]
AT5G54810.11.2e-8568.84tryptophan synthase beta-subunit 1[more]
AT5G38530.14.9e-1029.88tryptophan synthase beta type 2[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B3A1|A0A1S3B3A1_CUCME5.2e-10794.06Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103485497 PE=3 SV=1[more]
tr|A0A0A0LUA1|A0A0A0LUA1_CUCSA6.8e-10793.56Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G064170 PE=3 SV=1[more]
tr|A0A1R3I2E8|A0A1R3I2E8_COCAP1.8e-9985.00Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15455 PE=3 SV=1[more]
tr|A0A1R3I2K9|A0A1R3I2K9_COCAP1.2e-9884.16Tryptophan synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_15456 PE=3 SV=1[more]
tr|A0A061GGU3|A0A061GGU3_THECC1.5e-9883.66Tryptophan synthase OS=Theobroma cacao OX=3641 GN=TCM_030179 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_008441364.17.9e-10794.06PREDICTED: tryptophan synthase beta chain 1-like [Cucumis melo][more]
XP_004145174.11.0e-10693.56PREDICTED: tryptophan synthase beta chain 1-like [Cucumis sativus] >KGN64544.1 h... [more]
XP_022954970.14.3e-10592.08tryptophan synthase beta chain 1-like [Cucurbita moschata][more]
XP_022994295.17.4e-10591.63tryptophan synthase beta chain 1-like [Cucurbita maxima][more]
XP_023542665.19.6e-10591.13tryptophan synthase beta chain 1-like [Cucurbita pepo subsp. pepo][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006568tryptophan metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004834tryptophan synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR006654Trp_synth_beta
IPR001926PLP-dep
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0008150 biological_process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006568 tryptophan metabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0004834 tryptophan synthase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001456Bhi08M001456mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 10..195
e-value: 3.7E-17
score: 62.6
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 18..203
e-value: 8.0E-75
score: 253.3
NoneNo IPR availablePANTHERPTHR42882:SF2TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEINcoord: 2..203
IPR006654Tryptophan synthase, beta chainPANTHERPTHR42882FAMILY NOT NAMEDcoord: 2..203
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILYSSF53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 3..201

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi08G001456Cucsa.086010Cucumber (Gy14) v1cgywgoB109
Bhi08G001456Carg26539Silver-seed gourdcarwgoB0932
Bhi08G001456Cla97C03G056090Watermelon (97103) v2wgowmbB482
The following gene(s) are paralogous to this gene:

None