Carg26450 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26450
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plant/MHJ24-14 protein
Location	Cucurbita_argyrosperma_scaffold_271 : 28418 .. 32210 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGATATTAAAGTTTTATTTTGTATAAAAACAAGAAATTAAATCGGACAAAATTTTCGAATCGTCATCCATTGCCGCAAAATCGAACCAGTTCATCGATCGAATCCGCCATGAGTCTGGCACTTCTCCAAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCCTCCGACGATGACGACCAAGATCTTGTCGTCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTAAGCTTCATTTGGTAATCTCTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGCAAGTCTGTTCGGTTGAACAAATTTTGAAACTGTTCTTTTTACTGATTTTGTTATCTGTGGGCTACCGGAGGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCGGCCGCGAGGGGGCCGGAGGAATCGTAGGGATAAGAAAGATTTGCCTACTGGTATGGGCTCAGTTACTTAGTGTTCGTTTATTATCATGAGTTTCTTAAGTCTGTTAAGAAGTAGAAGGGAAGAAAAAAAAATTTTCTGGAAAACTAGGTTTGAATCTTTGATGAACATCAGTTTCCTGATAAAGAGAGGAAGAGGAAGAATGGGTTTGTTTGAGAGAACCTTGGCCTCCTATTGTGCTACCTTGAGGGCTCTGCCGTCCTCTCATTAAAAGGTTGACCAATAAAACCCTAAAAGTTGGGAGGACTAGAACATAGACTTACTCAAGCTCCACCTTATATTGCTCACTTCTGAATTTCCCTTGCAGTTGGTTAAACACATGATTGGATCAACTTAGGAATCTAAAAATAACATGATTTCAATACTAAATAGCATAAGTTTCACCGGTTAATGCCGAGAAACTTTGATGTTGCCTTTTTATTTTCTTAACAAAAAACTTAGGGTTTGTTCGATAACCATTTGATTTTTGAAAGAACAACTTTCTTACAATGGTTTTCATCTCTTTTCAAGAAAATATTTGAATTCTTAGTCAAATTCCAAAAACAAAACAAATGTTTAAATGCTACTGTTTTTAGTTCAAACTTGGCTTGAATTTCTTAAAGCATTTGTAAAAAGTAGATGACAAACTAAACTTGTTGGTGGAAACAATGTTACTAAACATAATTTTAAAAAACAAAGGTCCAAAAATCAAATAGTTATTAGATAGAACCTTAGTTACTTGATTTCTGCCAATTAATTACATTTTCTATTGCTAGCCAATGAGGGCTCTAAGTCTTGGGTGTGGCCCCCTGATTCTTTGGGTTCCTTTAGCTTTAGATCTATTTTAATTCCACCAAAAGAGCCCTAAACTTCAAATTGTGCTCTACAATTTTGAAGAAACTATTCCAAAAGAGTCAAAATTTTTATCTGGGAAATCCTGATAGTGTGCATTGTTACATTAAACGAGAGTCAATAGAGAAACCCTTCTTCGACATATTTCAAAATCCCATGGTTTCTCTACAATGTATGGCTTGAATGTTTCTTAATAAGTTAAAAGAGTATTTCATTATCATGTACCTTGGCCATATATCTAAATGTGCTTGGTTTTTATTCATACACGTCCATTTTGTCCACCCGTGTGTGCTTTGACTTCCTAGCTTGTTCACTGTTGTAATCCAAATAATTATCTAAGAATGTTTTGTAATAATAAAAACCCCTGTAGCAATCAATAGAATACAATCTAGTATCCAAGTTTGAAGACAACAATTTTTCTGTAAGAGAATGAACAAAAAAGAGGAAAGACATTCATAATATTATATGTGCATCTGTTCAAGGGACCAAAAGCCCTCAAAGGTAGGGGAGATAGAAATTGATGAAAGAAAATGGTAGAAAAAATTGACAAGTATTGTGCTAAAAATGCAACAATGTGATCAGAATTGGAAAATTTGCTTGCTCTATGAAGTTTGAAGAGGGAAGTCAGAAAATGGAGATGGATCAAAGGGGTCCACTAAAAACTACGGATCCTTATCATTCTTTACTACGACAGTTGCCTAACTTGCAAGGAAATGTGTTCATTGCATTCAAACTGCTACATTGTGAATACTGGAGACTGCAACGAATCAACTTGCTTTGTCAGTGATTGGGCAATGGTGGTTCGCATCATCTTGCTAATTAGTAGTGTAGGCAAGTTCATATGGTTGTATGAAAGGATGTACTAAAGTAATTTATGAAATGAAACCGTATTTGTGTTTAATTATGTATAGTTTCTTTGACTAGACTGTACATTGCTCTACTTCTATATCTCTCAACCGGTGGAAAAAACCGATGCCGATGGTCATACTATGAAGTATTCTATTCTCTATGTATAATTATATGTATTTACCTATAACAATACTTCTATTGAACATCATGCGTGGCTTTTGCCATTAGGTAAGCATTAAGCTTCTCATTTTAGAAGAGTCCATGATCTGAACTTGTTTAATTTAATGCCAAATGGTTTGTTTATGATTTATCAGGATTTTCGATAACTGTCTGACTGTATAATCAATATTATTCCTGCAATGGTGCTTCCTTATAGTAGTTCATGCATGGGCTGTATATCCACTAGCGGCACGACAGTAGAATCAATAGGCATCTTCCTTGAAGGGAATAGGTTAAGTTCATTGTCACTATTTTCAATGCTGTTCCAATTAGTTTATTTGATTGAATACAGGTGGAAGGAATAAATGGAGTAATCCAAAGAGAGCAACAGTTTATAAAATTATTTGCAATTATGTGGGTCGATGTTTGGCATCAATTAAACTGCTTGATTGTACCTTTTTTTTTTTTTTTTTGTGCATTTTTGCTGTATTCTTTATTGTTTTCAAGGGAAGCAAGGGTAAAATGAAGATTGAACTGTGAACAGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAACAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCGACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGGTACATTTATCGCATTTTCAAAATTGTATCCTGGTTGAGTGACATTATTTCATTCCTCATCAATCCGTATGTACACGCATGCATAAAAAGAGAGAGAGAGCGAAAAGAAAAGAGTCCTGCTAGTGGTTTCCGGGTAGAGATTGTTAATTTTTAAAAATTTGATATTTCGAATTAAACGTATTCTTTTCTTCTCTTCTTTGAAATCCTGACGTAAATCAAAGCTGTTTTGCACTGAACTCAACTGTTCGTAGTAGTATCTATAAGTTTCTCGTGCTGATCTTGCCATTTTTGAACGGTATCGTGTGATTCCTTTTCCAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCAAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGACCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACGGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAGAGTATGTTATATATGTCTTTGAGCTCTTGGAGATTTGTGATAGATTTAATCTAAGCATGATTGTTCATACCAATCTGTGATATTACCATGTCTGGTTTATGTAGTT

mRNA sequence

TTTAGATATTAAAGTTTTATTTTGTATAAAAACAAGAAATTAAATCGGACAAAATTTTCGAATCGTCATCCATTGCCGCAAAATCGAACCAGTTCATCGATCGAATCCGCCATGAGTCTGGCACTTCTCCAAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCCTCCGACGATGACGACCAAGATCTTGTCGTCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCGGCCGCGAGGGGGCCGGAGGAATCGTAGGGATAAGAAAGATTTGCCTACTGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAACAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCGACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCAAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGACCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACGGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAGAGTATGTTATATATGTCTTTGAGCTCTTGGAGATTTGTGATAGATTTAATCTAAGCATGATTGTTCATACCAATCTGTGATATTACCATGTCTGGTTTATGTAGTT

Coding sequence (CDS)

ATGAGTCTGGCACTTCTCCAAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCCTCCGACGATGACGACCAAGATCTTGTCGTCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCGGCCGCGAGGGGGCCGGAGGAATCGTAGGGATAAGAAAGATTTGCCTACTGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAACAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCGACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCAAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGACCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACGGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAG

Protein sequence

MSLALLQGYSSAEEEAEDTSVFNNTSSDDDDQDLVVAAASTVTVNLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPRGGRRNRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD

Homology

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BLAST of Carg26450 vs. NCBI nr
Match: XP_022927942.1 (uncharacterized protein LOC111434694 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 3.1e-110
Identity = 243/245 (99.18%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60
           MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS
Sbjct: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60

Query: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPRGGRRNRRDKKDLPTGAVLEAK 120
           SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVD+PRGGRRNRR+KKDLPTGAVLEAK
Sbjct: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAK 120

Query: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT 180
           AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT
Sbjct: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT 180

Query: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL 240
           FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL
Sbjct: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL 240

Query: 241 RQQFD 246
           RQQFD
Sbjct: 241 RQQFD 245

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BLAST of Carg26450 vs. NCBI nr
Match: XP_022988917.1 (uncharacterized protein LOC111486129 [Cucurbita maxima] >XP_022988918.1 uncharacterized protein LOC111486129 [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106
Identity = 237/245 (96.73%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60
           MSLALLQGYS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVNLS+RDRSLFELPQPS
Sbjct: 1   MSLALLQGYS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVNLSVRDRSLFELPQPS 60

Query: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPRGGRRNRRDKKDLPTGAVLEAK 120
           SH GLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVD+ RGGRRNRR+KKDLPTGAVLEAK
Sbjct: 61  SHHGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDQLRGGRRNRREKKDLPTGAVLEAK 120

Query: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT 180
           AQLVGIHERVRSDVENNQPSNPSISNTTQ GKRVATATNPNAEDAAELLRMCLHCGIPKT
Sbjct: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQTGKRVATATNPNAEDAAELLRMCLHCGIPKT 180

Query: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL 240
           FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL
Sbjct: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQL 240

Query: 241 RQQFD 246
           RQQFD
Sbjct: 241 RQQFD 244

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BLAST of Carg26450 vs. NCBI nr
Match: XP_023531944.1 (uncharacterized protein LOC111794058 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99
Identity = 224/226 (99.12%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60
           MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS
Sbjct: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60

Query: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPRGGRRNRRDKKDLPTGAVLEAK 120
           SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVD+PRGGRRNRR+KKDLPTGAVLEAK
Sbjct: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAK 120

Query: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT 180
           AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT
Sbjct: 121 AQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKT 180

Query: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQ 227
           FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQ
Sbjct: 181 FSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQ 226

[Close]

BLAST of Carg26450 vs. NCBI nr
Match: XP_008455215.2 (PREDICTED: uncharacterized protein LOC103495434 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 224/248 (90.32%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60
           MSLALLQGYS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRD+SLFELPQPS
Sbjct: 1   MSLALLQGYSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDKSLFELPQPS 60

Query: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPR---GGRRNRRDKKDLPTGAVL 120
           S PGLPSAFDAFSEVSGPPEFLNNSVEE+AAPRD D+PR   GGRRNR++KKDLPTGAVL
Sbjct: 61  SQPGLPSAFDAFSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPTGAVL 120

Query: 121 EAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGI 180
           EAKAQLVGIHERVRSDVE+N  SN SISN T  GKRVATA NPNAEDAAELLRMCLHCGI
Sbjct: 121 EAKAQLVGIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCLHCGI 180

Query: 181 PKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240
           PKTFSNARGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE
Sbjct: 181 PKTFSNARGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240

Query: 241 MQLRQQFD 246
           MQLRQQFD
Sbjct: 241 MQLRQQFD 244

[Close]

BLAST of Carg26450 vs. NCBI nr
Match: XP_022141948.1 (uncharacterized protein LOC111012199 [Momordica charantia])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 185/205 (90.24%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 44  VNLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPR---G 103
           VNLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEE+AA +DVD+PR   G
Sbjct: 46  VNLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEYAATKDVDQPRGNHG 105

Query: 104 GRRNRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNP 163
           GRRNR++KKDLPTGAVLEAKAQLVGIHERVRSDVE+NQPSNPSISN TQ GKRVATA NP
Sbjct: 106 GRRNRKEKKDLPTGAVLEAKAQLVGIHERVRSDVESNQPSNPSISNATQEGKRVATAANP 165

Query: 164 NAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKI 223
           NAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP    EP+SETKKKGSTVKDKEK+
Sbjct: 166 NAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP----EPNSETKKKGSTVKDKEKV 225

Query: 224 KRMRGQSSHATWKSETEMQLRQQFD 246
           KRMRGQSSHATWKSETEM LRQQFD
Sbjct: 226 KRMRGQSSHATWKSETEMHLRQQFD 246

[Close]

BLAST of Carg26450 vs. TAIR10
Match: AT5G64160.1 (unknown protein)

HSP 1 Score: 208.0 bits (528), Expect = 6.6e-54
Identity = 111/186 (59.68%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 60  SSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPRGGRRNRRDKKDLPTGAVLEA 119
           + + GLPSA D FS++SGPPEFLNN  E        D     R +R+ KK  P G V+EA
Sbjct: 54  AKNAGLPSADDVFSQISGPPEFLNNRTEADNEASARDAEHANRISRKKKKVKPKGVVMEA 113

Query: 120 KAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPK 179
           K QLVGIHERVR+D++   PS+ S        KR++TATNPNAE++A+LLRMC+ CG+PK
Sbjct: 114 KPQLVGIHERVRNDID-APPSSES------GEKRISTATNPNAEESADLLRMCVQCGVPK 173

Query: 180 TFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQ 239
           T+++ARGM CP+CGDRP      PD + KKKGST+KDKEK KRMRGQSSHA+WKSETEMQ
Sbjct: 174 TYTSARGMVCPICGDRP-----LPDVDAKKKGSTIKDKEKSKRMRGQSSHASWKSETEMQ 227

Query: 240 LRQQFD 246
           LRQ FD
Sbjct: 234 LRQTFD 227

[Close]

BLAST of Carg26450 vs. TrEMBL
Match: tr|A0A1S3C0J1|A0A1S3C0J1_CUCME (uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 7.7e-97
Identity = 224/248 (90.32%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60
           MSLALLQGYS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRD+SLFELPQPS
Sbjct: 1   MSLALLQGYSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDKSLFELPQPS 60

Query: 61  SHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPR---GGRRNRRDKKDLPTGAVL 120
           S PGLPSAFDAFSEVSGPPEFLNNSVEE+AAPRD D+PR   GGRRNR++KKDLPTGAVL
Sbjct: 61  SQPGLPSAFDAFSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPTGAVL 120

Query: 121 EAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGI 180
           EAKAQLVGIHERVRSDVE+N  SN SISN T  GKRVATA NPNAEDAAELLRMCLHCGI
Sbjct: 121 EAKAQLVGIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCLHCGI 180

Query: 181 PKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240
           PKTFSNARGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE
Sbjct: 181 PKTFSNARGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240

Query: 241 MQLRQQFD 246
           MQLRQQFD
Sbjct: 241 MQLRQQFD 244

[Close]

BLAST of Carg26450 vs. TrEMBL
Match: tr|A0A0A0K7B5|A0A0A0K7B5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062770 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.0e-92
Identity = 180/206 (87.38%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 45  NLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRPR----- 104
           NLSIRD+SLFELPQPSS PGLPSAFDAFSEVSGPPEFLNNSVEE+AAPRD D+PR     
Sbjct: 60  NLSIRDKSLFELPQPSSQPGLPSAFDAFSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGH 119

Query: 105 GGRRNRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATN 164
           GGRRNR++KKDLPTGAVLEAKAQLVGIHERVRSDVE+N  SN SISN T   KRVATA N
Sbjct: 120 GGRRNRKEKKDLPTGAVLEAKAQLVGIHERVRSDVESNHSSNSSISNATPESKRVATAAN 179

Query: 165 PNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEK 224
           PNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP    EPDSE+KKKGSTVKDKEK
Sbjct: 180 PNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP----EPDSESKKKGSTVKDKEK 239

Query: 225 IKRMRGQSSHATWKSETEMQLRQQFD 246
           IKRMRGQSSHATWKSETEMQLRQQFD
Sbjct: 240 IKRMRGQSSHATWKSETEMQLRQQFD 261

[Close]

BLAST of Carg26450 vs. TrEMBL
Match: tr|A0A2I4GGH0|A0A2I4GGH0_9ROSI (uncharacterized protein LOC109007678 isoform X2 OS=Juglans regia OX=51240 GN=LOC109007678 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 147/202 (72.77%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 47  SIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRP---RGGRR 106
           S+R +S  +LPQPSS  GLPSA D FS+VSGPP FLNNSVEE+ + ++VD+    RGGRR
Sbjct: 48  SVRRKSFVDLPQPSSVSGLPSALDVFSQVSGPPAFLNNSVEEYGSAKEVDQKEVRRGGRR 107

Query: 107 NRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAE 166
           NR++KKDLPTGAV+EAKAQLVGIHERVRSD+E NQP   S S+T Q  KRVATA NPN E
Sbjct: 108 NRKEKKDLPTGAVVEAKAQLVGIHERVRSDIEGNQPPASSASSTMQGSKRVATAANPNVE 167

Query: 167 DAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRM 226
           DAAELLRMCL CGIPKT+SNARGM CP+CGDRPP+   +  +E KKKGS +KDKEK KRM
Sbjct: 168 DAAELLRMCLQCGIPKTYSNARGMVCPVCGDRPPD---DASNEPKKKGSVIKDKEKSKRM 227

Query: 227 RGQSSHATWKSETEMQLRQQFD 246
           +GQSSHATWKSETEMQLRQQFD
Sbjct: 228 KGQSSHATWKSETEMQLRQQFD 246

[Close]

BLAST of Carg26450 vs. TrEMBL
Match: tr|A0A2P5CS18|A0A2P5CS18_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_128350 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 150/204 (73.53%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 45  NLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDRP---RGG 104
           N SIRDRS F+LPQP++  GLPSAFDAF+EVSGPPEFLNNSVEE+ + +DVD+     G 
Sbjct: 50  NRSIRDRSHFDLPQPNA-SGLPSAFDAFTEVSGPPEFLNNSVEEYGSIKDVDQQHGRHGR 109

Query: 105 RRNRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPN 164
           RR  RDKKDLP GAV+EAKA LVGIHERVRSD+E NQP   ++S+T Q  KRV TA NPN
Sbjct: 110 RRIHRDKKDLPAGAVMEAKAHLVGIHERVRSDIEGNQPPTSTVSSTAQGDKRVITAANPN 169

Query: 165 AEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIK 224
           AEDAA+LLRMCL CGIPKT+S+ARGM CP+C DRPP    +P +ETKKKGSTVKDKEK K
Sbjct: 170 AEDAADLLRMCLQCGIPKTYSSARGMVCPVCSDRPP---ADPSNETKKKGSTVKDKEKSK 229

Query: 225 RMRGQSSHATWKSETEMQLRQQFD 246
           RM+GQSSHATWKSETEMQLRQQFD
Sbjct: 230 RMKGQSSHATWKSETEMQLRQQFD 249

[Close]

BLAST of Carg26450 vs. TrEMBL
Match: tr|A0A2P5ARD7|A0A2P5ARD7_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_343620 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.4e-74
Identity = 149/204 (73.04%), Postives = 169/204 (82.84%), Query Frame = 0


Query: 45  NLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDR---PRGG 104
           N SIRDRSLF+LPQP++  GLPSAFDAF+EVSGPPEFLNNSVEE+ + +DVD+     G 
Sbjct: 50  NRSIRDRSLFDLPQPNA-SGLPSAFDAFTEVSGPPEFLNNSVEEYGSTKDVDQQHGKHGR 109

Query: 105 RRNRRDKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPN 164
           RR  RDKKDLP GAV+EAKA LVGIHERVRSD+E NQP   ++S+T    KRV TA NPN
Sbjct: 110 RRIHRDKKDLPAGAVMEAKAHLVGIHERVRSDIEGNQPPTSTVSSTAPGDKRVITAANPN 169

Query: 165 AEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIK 224
           AEDAA+LLRMCL CGIPKT+S+ RGM CP+C DRPP    +P +ETKKKGSTVKDKEK K
Sbjct: 170 AEDAADLLRMCLQCGIPKTYSSTRGMVCPVCSDRPP---ADPSNETKKKGSTVKDKEKSK 229

Query: 225 RMRGQSSHATWKSETEMQLRQQFD 246
           RM+GQSSHATWKSETEMQLRQQFD
Sbjct: 230 RMKGQSSHATWKSETEMQLRQQFD 249

The following BLAST results are available for this feature:

BLAST of Carg26450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927942.1	3.1e-110	99.18	uncharacterized protein LOC111434694 [Cucurbita moschata]	[more]
XP_022988917.1	3.6e-106	96.73	uncharacterized protein LOC111486129 [Cucurbita maxima] >XP_022988918.1 uncharac...	[more]
XP_023531944.1	4.3e-99	99.12	uncharacterized protein LOC111794058 [Cucurbita pepo subsp. pepo]	[more]
XP_008455215.2	1.2e-96	90.32	PREDICTED: uncharacterized protein LOC103495434 [Cucumis melo]	[more]
XP_022141948.1	1.5e-96	90.24	uncharacterized protein LOC111012199 [Momordica charantia]	[more]

BLAST of Carg26450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64160.1	6.6e-54	59.68	unknown protein	[more]

BLAST of Carg26450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0J1\|A0A1S3C0J1_CUCME	7.7e-97	90.32	uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=...	[more]
tr\|A0A0A0K7B5\|A0A0A0K7B5_CUCSA	2.0e-92	87.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062770 PE=4 SV=1	[more]
tr\|A0A2I4GGH0\|A0A2I4GGH0_9ROSI	1.8e-74	72.77	uncharacterized protein LOC109007678 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P5CS18\|A0A2P5CS18_PARAD	1.8e-74	73.53	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_128350 PE...	[more]
tr\|A0A2P5ARD7\|A0A2P5ARD7_9ROSA	2.4e-74	73.04	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_343620 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26450-RA	Carg26450-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..245
None	No IPR available	PANTHER	PTHR35321	FAMILY NOT NAMED	coord: 1..245

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26450	Cla001843	Watermelon (97103) v1	carwmB0365
Carg26450	Csa7G062770	Cucumber (Chinese Long) v2	carcuB0399
Carg26450	MELO3C018651	Melon (DHL92) v3.5.1	carmeB0375
Carg26450	ClCG09G015340	Watermelon (Charleston Gray)	carwcgB0363
Carg26450	CSPI07G05480	Wild cucumber (PI 183967)	carcpiB0404
Carg26450	Cucsa.217860	Cucumber (Gy14) v1	carcgyB0430
Carg26450	CmaCh11G016440	Cucurbita maxima (Rimu)	carcmaB0524
Carg26450	CmoCh11G014890	Cucurbita moschata (Rifu)	carcmoB0507
Carg26450	Lsi03G007690	Bottle gourd (USVL1VR-Ls)	carlsiB338
Carg26450	Cp4.1LG15g02370	Cucurbita pepo (Zucchini)	carcpeB0521
Carg26450	Cp4.1LG04g06940	Cucurbita pepo (Zucchini)	carcpeB0522
Carg26450	CsGy7G005100	Cucumber (Gy14) v2	carcgybB0379
Carg26450	MELO3C018651.2	Melon (DHL92) v3.6.1	carmedB0380
Carg26450	CsaV3_7G006430	Cucumber (Chinese Long) v3	carcucB0402
Carg26450	Cla97C09G177330	Watermelon (97103) v2	carwmbB0390
Carg26450	Bhi05G000692	Wax gourd	carwgoB0455

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26450	Carg24504	Silver-seed gourd	carcarB400

The following block(s) are covering this gene:

None