Carg24504 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24504
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plant/MHJ24-14 protein
Location	Cucurbita_argyrosperma_scaffold_121 : 56094 .. 59882 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGGCACTTCTCCAAGGCTATTCTTCAGCCGAAGAAGAAGCTGAAGACAACTCTGTCTTCAACCACACCTCTTCTGACGATGACGACGAAGACCTTGCCGCCGCCGCCTCTTCAGTTACCTTCAATCTTTCCATACGCGACAAGTCACTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTGCCTTCGCTTTCGACGCTTTCTCCGAAGTACGCCTCTTTGGTTAATCTCTTTGTATCTTTTTCTTTGTTTTTTTTCTTGTTCGGTTGAGTGAATTCGGAAGACTGTTCGTTTTCTGATTTCTTATTGTGGGTTACCGGAGGTTTCAGGACCGCCGGAGTTTCTAAATAATTCGGTTGAGGAGTACGCTGCACCGAGAGATGTTGATCAGCCGCGAGGGGGCCATGGGAGCCGTAGGAATCGTAAGGAGAAGAAAGATTTTCCTACTGGTATGTGTTCGATTCCTGATTTAGCATTAATTTTATTGTTATGAGCTTCGCTAGGCTGCTAGGAAGTTGAAGGGAAGCAAAATTATTTCTGGAAAATTTGGCTTGAATCTTTTATGAGCTTCTCTGGGCTCCTTTAGTTGTAGATCTATTAGTCAAATAACGATCTAAGAATGCTTTACAAGGATAAAACCCTCGGGAGTAGTAAATAGAACCATAGAAATGTAGAACAAGATCTAGTATTCAAGTTTGAGCAACAACTTTCCTTGAAGAGAGTGATCGAAAATAGGAAAGACATCCATTATATACAATGTGCATTTGTTCAAGGGACGAAATGCCCCCGAAGGTAGGGAAGATGGAAATTGACATAAGAAGTGGGAGTGTTGCCGTAGTCCCCCACTGACTCGAAAAGGGAACATCATGTTTATATAAGCATGAAACAACATCCTCATTCATTGAGGCTTTTGCGATGAAACCAAAAATAAAACCATAGGTGGATATGCCTATAGTGGATAACCAGTTAGGGAGATATTGGAGAGGTCTATTGTCTCCCAACAATTGGTAGTAGAACCATGCTCCAAACTTAGCCATGTTTTGTGTTCATGAGTGAGGAACAAAGGTTGTAAGCCTTGAAAAAAGTAGTCGTGTACAATCCATGATTGATCCCCTATTGAATAGGCAGTGTACTTTGAAGAAGATGAGTTGGCTTGGATCCAAGCAATGTCCTTAAGACTCTAGATGGATGGGTGGCGATTTAAGGTGTGGTTACGTGGTCTTTTGTTCAAGGGCAAGATTGTTGGAAGTGCAACCAAAAGCCTACATCAGCTAGAAAAGGGAAAAATCAAGGGTACATAAGTGAAAGAGACTTAACATTTTTACTGGTATGATACCTTTTGGGTGAATCAAAGCAAAGCTTTCATGGCTTATGCCCACGTACCATTGTGAAAATGCGAAAAGTCCATTGTTCCTACCAAAAAATGTAAGGAAAAATTAATAAGTAATATGCTAAAAATGCACGATGCGAGTTGAAAATTTTGCTTGCTCTCTGATGTTGAAGATGGAGATCAGACATGGAGTTGGGTCAATGGGTCTACTAAAACGAATCAACAATATCTTTCTTCACTATGACACTTGCTTAACTTGTAAGGAATATGTGCTCATTGCATACAAATTGCAGTTGCCTAACTTGTGAGGAACATGTGTTCATTGCATACAAACTGCAACCATTGTGAGCACTGGAGACAGCAATGAATAAACTTTCTTGGTCAGTGACTGGGCGATGGTGTTTCACAACACCTTGCTAGTGGGTGGTATGGGCAAGTTCATTTGGTTGAAGTATAAGAAGATGTATGAAATTAATTTTTTATATTTTTGGTTTCTTTGACTAGACGATACATCGCTTCACTGCTATATCTCTCCGCTAGTGGAAAGAAACTGATGCTGAATCAGATATGTCATGTCATGCTATGAAATATTTTGTTTATGAAAATGATTTTCATTTTCTCCAACATCAAATTTTAATCCAAAGAGAACAAATTTTAAAATTATTTGCCCTTATGCGGGCGTGTTTGGCATCAATTGGACTGGGTGATGAAAGTCGGGTCTTTCATTAAAAAAAGATTAGACTGGGTGCTGTTGTTGTTTTATATTACCTTGTGTATTTTTTCTTTCATGAAAGCAAGTGAAAAAATGAAAATTGTACTGTTTTGTGTTTATACCATCTCATTATAATTGCCCTTCTGTGAACCTTATACTGTGAACAGGTGCTGTAGTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGCGACTTTGAGAGTAATCAACTATCAAATCCATCTGTTTCAAACACAACACAGCAAGGCAAGCGCATGGCAACTGCAGCCAATCCAAATGCTGAAGATGCTGCAGAGCTACTAAGGTACATTTATTGTATTTTCAAATTGTATCCTGGTTGAGTGACAAGGTTTCATTCCTCCGCCATCTGCATTTACGCACACAAAGGAAGAAAGAAAGAAAGAGAGAAGTTGTTGAGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTTCATTGGTATGAGGCCTTTTGGGGTAGCCCAAAGCAAAGCCATGAGAGCTTATACTCAAAATGGACAATATCATATTATCATGGAGAGTCGTTATTCCTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCATGTCAATAGAATCCTCAAATGTCAAACAAAGAAGTTGTGAGCCTCGAAGGTGTAAGTGTCGAACAAATGGTGTACTTTGTTCGAGGACTCCAGAGAATGAGTCGAGTCTCGATTAAGGGGAGGCTGTTCGAGGGTTTCATAGGCCTCAGGGGAGGATCTATATTGTACTTTGTTCGAGGGGAGAATTGTTGGGAGGGAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAAGTAAAGAATACATCTCCATTGGTATGAGAGCTTTTGGAGAAACCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATACCATACCATTTTGGGGATCCGTGATTCCTAACCGAAGTTTCTGTTTAAGAATTTTGATATTGCAAAGTAAACATTTACTTTTCTTCCTTTCTCTGGAACCCTTTGGTCAATCATGGCTGCTTCGCATATAACTCGACTTATTTATAAATTTCTCGTGCAAATGTTGGTATTTTACAACGTTATCATGTGATTATTTTTCCAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAACGCACGAGGAATGTTTTGTCCTCTATGTGGCGATCGTCCTCCCGAGCCAGACAGTGAAACCAAAAAGAAGGGATCTACTGTGAAAGATAAGGAAAAGATTAAGAGAATGAGGGGACAGTCGTCTCATGCTTCTTGGAAGAGTGAAACAGAAATGCATCTGAGACAACAGTTTGATTGAAGAGTATTTCATGTATGTCTTTGAGCTCTTGAATACATGTGATAGATAGTGTACCATCATTATTCATACTAATCTGTGACATTATGATGTAAGGTTTATGTAGTTTCTAACCTGTTATTTTAATATTTTTTAATATCACTCTCTTACAACTCGTGTTATTTTGTAAACGGCTTTGATGTTGACTCTACGGGCATAGTTTTAATCTTCTCAATTAGTGGATTTATAAAGAGATTTAATATTTCGTGGTCTAGTGGTATACAAACTCATTATATATAGGATACATTCACTCTCATGTCTCTATGTGAACGATTTGAATAAAATTATTTGGATCAATTACA

mRNA sequence

ATGAGTCTGGCACTTCTCCAAGGCTATTCTTCAGCCGAAGAAGAAGCTGAAGACAACTCTGTCTTCAACCACACCTCTTCTGACGATGACGACGAAGACCTTGCCGCCGCCGCCTCTTCAGTTACCTTCAATCTTTCCATACGCGACAAGTCACTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTGCCTTCGCTTTCGACGCTTTCTCCGAAGTACGCCTCTTTGGTTTCAGGACCGCCGGAGTTTCTAAATAATTCGGTTGAGGAGTACGCTGCACCGAGAGATGTTGATCAGCCGCGAGGGGGCCATGGGAGCCGTAGGAATCGTAAGGAGAAGAAAGATTTTCCTACTGGTGCTGTAGTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGCGACTTTGAGAGTAATCAACTATCAAATCCATCTGTTTCAAACACAACACAGCAAGGCAAGCGCATGGCAACTGCAGCCAATCCAAATGCTGAAGATGCTGCAGAGCTACTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAACGCACGAGGAATGTTTTGTCCTCTATGTGGCGATCGTCCTCCCGAGCCAGACAGTGAAACCAAAAAGAAGGGATCTACTGTGAAAGATAAGGAAAAGATTAAGAGAATGAGGGGACAGTCGTCTCATGCTTCTTGGAAGAGTGAAACAGAAATGCATCTGAGACAACAGTTTGATTGAAGAGTATTTCATGTATGTCTTTGAGCTCTTGAATACATGTGATAGATAGTGTACCATCATTATTCATACTAATCTGTGACATTATGATGTAAGGTTTATGTAGTTTCTAACCTGTTATTTTAATATTTTTTAATATCACTCTCTTACAACTCGTGTTATTTTGTAAACGGCTTTGATGTTGACTCTACGGGCATAGTTTTAATCTTCTCAATTAGTGGATTTATAAAGAGATTTAATATTTCGTGGTCTAGTGGTATACAAACTCATTATATATAGGATACATTCACTCTCATGTCTCTATGTGAACGATTTGAATAAAATTATTTGGATCAATTACA

Coding sequence (CDS)

ATGAGTCTGGCACTTCTCCAAGGCTATTCTTCAGCCGAAGAAGAAGCTGAAGACAACTCTGTCTTCAACCACACCTCTTCTGACGATGACGACGAAGACCTTGCCGCCGCCGCCTCTTCAGTTACCTTCAATCTTTCCATACGCGACAAGTCACTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTGCCTTCGCTTTCGACGCTTTCTCCGAAGTACGCCTCTTTGGTTTCAGGACCGCCGGAGTTTCTAAATAATTCGGTTGAGGAGTACGCTGCACCGAGAGATGTTGATCAGCCGCGAGGGGGCCATGGGAGCCGTAGGAATCGTAAGGAGAAGAAAGATTTTCCTACTGGTGCTGTAGTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGCGACTTTGAGAGTAATCAACTATCAAATCCATCTGTTTCAAACACAACACAGCAAGGCAAGCGCATGGCAACTGCAGCCAATCCAAATGCTGAAGATGCTGCAGAGCTACTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAACGCACGAGGAATGTTTTGTCCTCTATGTGGCGATCGTCCTCCCGAGCCAGACAGTGAAACCAAAAAGAAGGGATCTACTGTGAAAGATAAGGAAAAGATTAAGAGAATGAGGGGACAGTCGTCTCATGCTTCTTGGAAGAGTGAAACAGAAATGCATCTGAGACAACAGTTTGATTGA

Protein sequence

MSLALLQGYSSAEEEAEDNSVFNHTSSDDDDEDLAAAASSVTFNLSIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEMHLRQQFD

Homology

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BLAST of Carg24504 vs. NCBI nr
Match: XP_022963474.1 (uncharacterized protein LOC111463799 [Cucurbita moschata])

HSP 1 Score: 391.0 bits (1003), Expect = 3.1e-105
Identity = 236/247 (95.55%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS 60
           MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS
Sbjct: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS 60

Query: 61  HPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPTG 120
           HPGLPS         S VSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEK+DFPTG
Sbjct: 61  HPGLPSAFDA----FSEVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKRDFPTG 120

Query: 121 AVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLH 180
           AVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLH
Sbjct: 121 AVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLH 180

Query: 181 CGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM 240
           CGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM
Sbjct: 181 CGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM 240

Query: 241 HLRQQFD 248
           HLRQQFD
Sbjct: 241 HLRQQFD 243

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BLAST of Carg24504 vs. NCBI nr
Match: XP_022967622.1 (uncharacterized protein LOC111467068 [Cucurbita maxima])

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 230/247 (93.12%), Postives = 230/247 (93.12%), Query Frame = 0


Query: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS 60
           MSLALLQGYS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS
Sbjct: 1   MSLALLQGYS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPSS 60

Query: 61  HPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPTG 120
           HPGLPS         S VSGPPEFLNNSVEEYAAPRDVDQPRGGHGS RN KEKKD PTG
Sbjct: 61  HPGLPSAFDA----FSEVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSHRNCKEKKDLPTG 120

Query: 121 AVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLH 180
           AVVEAKAQLVGIHERVRSDFESNQLSN SVSNTTQQGKRMATAANPNAEDAAELLRMCLH
Sbjct: 121 AVVEAKAQLVGIHERVRSDFESNQLSNSSVSNTTQQGKRMATAANPNAEDAAELLRMCLH 180

Query: 181 CGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM 240
           CGIPKTFSNARGMFCPLCGDRPPEPD ETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM
Sbjct: 181 CGIPKTFSNARGMFCPLCGDRPPEPDGETKKKGSTVKDKEKIKRMRGQSSHASWKSETEM 240

Query: 241 HLRQQFD 248
           HLRQQFD
Sbjct: 241 HLRQQFD 242

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BLAST of Carg24504 vs. NCBI nr
Match: XP_022141948.1 (uncharacterized protein LOC111012199 [Momordica charantia])

HSP 1 Score: 352.8 bits (904), Expect = 9.3e-94
Identity = 178/204 (87.25%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 44  NLSIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRG 103
           NLSIRD+SLFELPQPSSHPGLPS         S VSGPPEFLNNSVEEYAA +DVDQPRG
Sbjct: 47  NLSIRDRSLFELPQPSSHPGLPSAFDA----FSEVSGPPEFLNNSVEEYAATKDVDQPRG 106

Query: 104 GHGSRRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATA 163
            HG RRNRKEKKD PTGAV+EAKAQLVGIHERVRSD ESNQ SNPS+SN TQ+GKR+ATA
Sbjct: 107 NHGGRRNRKEKKDLPTGAVLEAKAQLVGIHERVRSDVESNQPSNPSISNATQEGKRVATA 166

Query: 164 ANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIK 223
           ANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEP+SETKKKGSTVKDKEK+K
Sbjct: 167 ANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPNSETKKKGSTVKDKEKVK 226

Query: 224 RMRGQSSHASWKSETEMHLRQQFD 248
           RMRGQSSHA+WKSETEMHLRQQFD
Sbjct: 227 RMRGQSSHATWKSETEMHLRQQFD 246

[Close]

BLAST of Carg24504 vs. NCBI nr
Match: XP_008455215.2 (PREDICTED: uncharacterized protein LOC103495434 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93
Identity = 218/248 (87.90%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 1   MSLALLQGY-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPS 60
           MSLALLQGY S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX T NLSIRDKSLFELPQPS
Sbjct: 1   MSLALLQGYSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDKSLFELPQPS 60

Query: 61  SHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPT 120
           S PGLPS         S VSGPPEFLNNSVEEYAAPRD DQPRGGHG RRNRKEKKD PT
Sbjct: 61  SQPGLPSAFDA----FSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPT 120

Query: 121 GAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCL 180
           GAV+EAKAQLVGIHERVRSD ESN  SN S+SN T +GKR+ATAANPNAEDAAELLRMCL
Sbjct: 121 GAVLEAKAQLVGIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCL 180

Query: 181 HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETE 240
           HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHA+WKSETE
Sbjct: 181 HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240

Query: 241 MHLRQQFD 248
           M LRQQFD
Sbjct: 241 MQLRQQFD 244

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BLAST of Carg24504 vs. NCBI nr
Match: XP_022927942.1 (uncharacterized protein LOC111434694 [Cucurbita moschata])

HSP 1 Score: 341.3 bits (874), Expect = 2.8e-90
Identity = 218/252 (86.51%), Postives = 226/252 (89.68%), Query Frame = 0


Query: 1   MSLALLQGYS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPS 60
           MSLALLQGYS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T NLSIRD+SLFELPQPS
Sbjct: 1   MSLALLQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDRSLFELPQPS 60

Query: 61  SHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPT 120
           SHPGLPS         S VSGPPEFLNNSVEE+AAPRDVDQPRGG   RRNR+EKKD PT
Sbjct: 61  SHPGLPSAFDA----FSEVSGPPEFLNNSVEEFAAPRDVDQPRGG---RRNRREKKDLPT 120

Query: 121 GAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCL 180
           GAV+EAKAQLVGIHERVRSD E+NQ SNPS+SNTTQ GKR+ATA NPNAEDAAELLRMCL
Sbjct: 121 GAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCL 180

Query: 181 HCGIPKTFSNARGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHASWK 240
           HCGIPKTFSNARGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHA+WK
Sbjct: 181 HCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWK 240

Query: 241 SETEMHLRQQFD 248
           SETEM LRQQFD
Sbjct: 241 SETEMQLRQQFD 245

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BLAST of Carg24504 vs. TAIR10
Match: AT5G64160.1 (unknown protein)

HSP 1 Score: 195.3 bits (495), Expect = 4.5e-50
Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 0


Query: 59  SSHPGLPSLSTLSPKYASLVSGPPEFLNNSVE--EYAAPRDVDQPRGGHGSRRNRKEKKD 118
           + + GLPS   +     S +SGPPEFLNN  E    A+ RD +     H +R +RK+KK 
Sbjct: 54  AKNAGLPSADDV----FSQISGPPEFLNNRTEADNEASARDAE-----HANRISRKKKKV 113

Query: 119 FPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLR 178
            P G V+EAK QLVGIHERVR+D ++     P  S + +  KR++TA NPNAE++A+LLR
Sbjct: 114 KPKGVVMEAKPQLVGIHERVRNDIDA-----PPSSESGE--KRISTATNPNAEESADLLR 173

Query: 179 MCLHCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKS 238
           MC+ CG+PKT+++ARGM CP+CGDR P PD + KKKGST+KDKEK KRMRGQSSHASWKS
Sbjct: 174 MCVQCGVPKTYTSARGMVCPICGDR-PLPDVDAKKKGSTIKDKEKSKRMRGQSSHASWKS 227

Query: 239 ETEMHLRQQFD 248
           ETEM LRQ FD
Sbjct: 234 ETEMQLRQTFD 227

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BLAST of Carg24504 vs. TrEMBL
Match: tr|A0A1S3C0J1|A0A1S3C0J1_CUCME (uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.0e-93
Identity = 218/248 (87.90%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 1   MSLALLQGY-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTFNLSIRDKSLFELPQPS 60
           MSLALLQGY S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX T NLSIRDKSLFELPQPS
Sbjct: 1   MSLALLQGYSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLSIRDKSLFELPQPS 60

Query: 61  SHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKKDFPT 120
           S PGLPS         S VSGPPEFLNNSVEEYAAPRD DQPRGGHG RRNRKEKKD PT
Sbjct: 61  SQPGLPSAFDA----FSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPT 120

Query: 121 GAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCL 180
           GAV+EAKAQLVGIHERVRSD ESN  SN S+SN T +GKR+ATAANPNAEDAAELLRMCL
Sbjct: 121 GAVLEAKAQLVGIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCL 180

Query: 181 HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETE 240
           HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHA+WKSETE
Sbjct: 181 HCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETE 240

Query: 241 MHLRQQFD 248
           M LRQQFD
Sbjct: 241 MQLRQQFD 244

[Close]

BLAST of Carg24504 vs. TrEMBL
Match: tr|A0A0A0K7B5|A0A0A0K7B5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062770 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.0e-90
Identity = 176/206 (85.44%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 44  NLSIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRG 103
           NLSIRDKSLFELPQPSS PGLPS         S VSGPPEFLNNSVEEYAAPRD DQPRG
Sbjct: 60  NLSIRDKSLFELPQPSSQPGLPSAFDA----FSEVSGPPEFLNNSVEEYAAPRDADQPRG 119

Query: 104 --GHGSRRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMA 163
             GHG RRNRKEKKD PTGAV+EAKAQLVGIHERVRSD ESN  SN S+SN T + KR+A
Sbjct: 120 GHGHGGRRNRKEKKDLPTGAVLEAKAQLVGIHERVRSDVESNHSSNSSISNATPESKRVA 179

Query: 164 TAANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSETKKKGSTVKDKEK 223
           TAANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSE+KKKGSTVKDKEK
Sbjct: 180 TAANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSESKKKGSTVKDKEK 239

Query: 224 IKRMRGQSSHASWKSETEMHLRQQFD 248
           IKRMRGQSSHA+WKSETEM LRQQFD
Sbjct: 240 IKRMRGQSSHATWKSETEMQLRQQFD 261

[Close]

BLAST of Carg24504 vs. TrEMBL
Match: tr|A0A2I4GGH0|A0A2I4GGH0_9ROSI (uncharacterized protein LOC109007678 isoform X2 OS=Juglans regia OX=51240 GN=LOC109007678 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 145/203 (71.43%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 46  SIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGH 105
           S+R KS  +LPQPSS  GLPS   +     S VSGPP FLNNSVEEY + ++VDQ     
Sbjct: 48  SVRRKSFVDLPQPSSVSGLPSALDV----FSQVSGPPAFLNNSVEEYGSAKEVDQKEVRR 107

Query: 106 GSRRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMATAAN 165
           G RRNRKEKKD PTGAVVEAKAQLVGIHERVRSD E NQ    S S+T Q  KR+ATAAN
Sbjct: 108 GGRRNRKEKKDLPTGAVVEAKAQLVGIHERVRSDIEGNQPPASSASSTMQGSKRVATAAN 167

Query: 166 PNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDS-ETKKKGSTVKDKEKIKR 225
           PN EDAAELLRMCL CGIPKT+SNARGM CP+CGDRPP+  S E KKKGS +KDKEK KR
Sbjct: 168 PNVEDAAELLRMCLQCGIPKTYSNARGMVCPVCGDRPPDDASNEPKKKGSVIKDKEKSKR 227

Query: 226 MRGQSSHASWKSETEMHLRQQFD 248
           M+GQSSHA+WKSETEM LRQQFD
Sbjct: 228 MKGQSSHATWKSETEMQLRQQFD 246

[Close]

BLAST of Carg24504 vs. TrEMBL
Match: tr|A0A1J7GNR9|A0A1J7GNR9_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26642 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.2e-69
Identity = 145/205 (70.73%), Postives = 168/205 (81.95%), Query Frame = 0


Query: 46  SIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPRGGH 105
           S+ D+S+F++PQPSS  GLPS    + +  S +SGPP+FLNNSVEEY   RDVDQ +G H
Sbjct: 44  SLYDRSIFKVPQPSSASGLPS----AFEVFSEISGPPQFLNNSVEEYNPARDVDQQQGRH 103

Query: 106 GS-RRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFE-SNQLSNPSVSNTTQQGKRMATA 165
           GS RR+RKEKKD PTGAVVEAK QLVGIHERVRSD +  +Q   P+ S+ ++  KR+ TA
Sbjct: 104 GSRRRHRKEKKDLPTGAVVEAKPQLVGIHERVRSDMDGGSQPPTPAASSASETVKRVPTA 163

Query: 166 ANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP-EPDSETKKKGSTVKDKEKI 225
           +NPNAEDAAELLRMCL CGIPKTFSNARGM CP+CGDRPP +P SE+KKKGSTVKDKEK 
Sbjct: 164 SNPNAEDAAELLRMCLQCGIPKTFSNARGMVCPVCGDRPPVDPSSESKKKGSTVKDKEKS 223

Query: 226 KRMRGQSSHASWKSETEMHLRQQFD 248
           KRMRGQSSHA+WKSETEM LRQ FD
Sbjct: 224 KRMRGQSSHATWKSETEMQLRQTFD 244

[Close]

BLAST of Carg24504 vs. TrEMBL
Match: tr|A0A2P5CS18|A0A2P5CS18_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_128350 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-69
Identity = 143/206 (69.42%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 43  FNLSIRDKSLFELPQPSSHPGLPSLSTLSPKYASLVSGPPEFLNNSVEEYAAPRDVDQPR 102
           FN SIRD+S F+LPQP++  GLPS      +    VSGPPEFLNNSVEEY + +DVDQ  
Sbjct: 49  FNRSIRDRSHFDLPQPNA-SGLPSAFDAFTE----VSGPPEFLNNSVEEYGSIKDVDQQH 108

Query: 103 GGHGSRRNRKEKKDFPTGAVVEAKAQLVGIHERVRSDFESNQLSNPSVSNTTQQGKRMAT 162
           G HG RR  ++KKD P GAV+EAKA LVGIHERVRSD E NQ    +VS+T Q  KR+ T
Sbjct: 109 GRHGRRRIHRDKKDLPAGAVMEAKAHLVGIHERVRSDIEGNQPPTSTVSSTAQGDKRVIT 168

Query: 163 AANPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPP-EPDSETKKKGSTVKDKEK 222
           AANPNAEDAA+LLRMCL CGIPKT+S+ARGM CP+C DRPP +P +ETKKKGSTVKDKEK
Sbjct: 169 AANPNAEDAADLLRMCLQCGIPKTYSSARGMVCPVCSDRPPADPSNETKKKGSTVKDKEK 228

Query: 223 IKRMRGQSSHASWKSETEMHLRQQFD 248
            KRM+GQSSHA+WKSETEM LRQQFD
Sbjct: 229 SKRMKGQSSHATWKSETEMQLRQQFD 249

The following BLAST results are available for this feature:

BLAST of Carg24504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963474.1	3.1e-105	95.55	uncharacterized protein LOC111463799 [Cucurbita moschata]	[more]
XP_022967622.1	1.0e-100	93.12	uncharacterized protein LOC111467068 [Cucurbita maxima]	[more]
XP_022141948.1	9.3e-94	87.25	uncharacterized protein LOC111012199 [Momordica charantia]	[more]
XP_008455215.2	1.6e-93	87.90	PREDICTED: uncharacterized protein LOC103495434 [Cucumis melo]	[more]
XP_022927942.1	2.8e-90	86.51	uncharacterized protein LOC111434694 [Cucurbita moschata]	[more]

BLAST of Carg24504 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64160.1	4.5e-50	57.59	unknown protein	[more]

BLAST of Carg24504 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24504 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0J1\|A0A1S3C0J1_CUCME	1.0e-93	87.90	uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=...	[more]
tr\|A0A0A0K7B5\|A0A0A0K7B5_CUCSA	7.0e-90	85.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062770 PE=4 SV=1	[more]
tr\|A0A2I4GGH0\|A0A2I4GGH0_9ROSI	4.0e-69	71.43	uncharacterized protein LOC109007678 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A1J7GNR9\|A0A1J7GNR9_LUPAN	5.2e-69	70.73	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26642 PE=4 S...	[more]
tr\|A0A2P5CS18\|A0A2P5CS18_PARAD	6.8e-69	69.42	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_128350 PE...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24504-RA	Carg24504-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..227
None	No IPR available	PANTHER	PTHR35321	FAMILY NOT NAMED	coord: 1..247

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24504	Cla001843	Watermelon (97103) v1	carwmB0975
Carg24504	Csa7G062770	Cucumber (Chinese Long) v2	carcuB0985
Carg24504	MELO3C018651	Melon (DHL92) v3.5.1	carmeB0948
Carg24504	ClCG09G015340	Watermelon (Charleston Gray)	carwcgB0947
Carg24504	CSPI07G05480	Wild cucumber (PI 183967)	carcpiB1008
Carg24504	Cucsa.217860	Cucumber (Gy14) v1	carcgyB1086
Carg24504	CmaCh19G002590	Cucurbita maxima (Rimu)	carcmaB1339
Carg24504	CmaCh11G016440	Cucurbita maxima (Rimu)	carcmaB1337
Carg24504	CmoCh19G002810	Cucurbita moschata (Rifu)	carcmoB1301
Carg24504	CmoCh11G014890	Cucurbita moschata (Rifu)	carcmoB1299
Carg24504	Lsi03G007690	Bottle gourd (USVL1VR-Ls)	carlsiB888
Carg24504	Cp4.1LG15g02370	Cucurbita pepo (Zucchini)	carcpeB1344
Carg24504	Cp4.1LG04g06940	Cucurbita pepo (Zucchini)	carcpeB1345
Carg24504	CsGy7G005100	Cucumber (Gy14) v2	carcgybB0958
Carg24504	MELO3C018651.2	Melon (DHL92) v3.6.1	carmedB0954
Carg24504	CsaV3_7G006430	Cucumber (Chinese Long) v3	carcucB1013
Carg24504	Cla97C09G177330	Watermelon (97103) v2	carwmbB1024
Carg24504	Bhi05G000692	Wax gourd	carwgoB1138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24504	Carg26450	Silver-seed gourd	carcarB400

The following block(s) are covering this gene:

None