Carg26429 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26429
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Patatin
Location	Cucurbita_argyrosperma_scaffold_457 : 55559 .. 57779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAAAACCTCCGCCTGCAATTGAAATCAAAGCTCACACTTTCTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCCATGGCTCCTCCTCTCTCTTCTATTTCCCGCCCCTTTTCTTCCCCAATTACGAACCCTAATCTCAATTTCACACACAGATACACTCTTCCATTACGCACCCAAACTCTACGTTTCACTTCAAATTCTTCGTCTTCATCGTCGCCTCCACAGCCGCCACCGCCGGATCCCATTCCCGAGAAGAAGTCCTTCGCTGTAGCCACCGGGGACCTCTTATTGGGGCTGGCGGCGAGGTTGATTAGTCGTTCCTCCAAAAAAAGTTCGAATGGGGTTGCTATGTTCGAGAATCGCAGTGGAACCAAGAGCGAGTACGAGGAGAGAATTGGAGCGGTGGTTGAGGATGAGATTCAGCCTGATGTAGTGTGGGAGCAGCGGATTAAGGATGTTAAGGCTGAGCGAGAGCGGCGAGTCGTTACCAGTCCAGGGTTTAGCTTCTCTGCCGCTGGTTTGTTGTTTCCATATCATCTTGGAGTTGCGAAATTTCTCATTGAGCATAGCTATATCAAGGTTCTTCTGATCCTTTTTTAACATTTCTTCTTAACTTGTTCGAGAATTTTGGTTGTGATTCCCTTTGTGTCTCTGTTGATGGGTTTTGTTGAACTCTGAATTGATGATATGCTTCAATTGGAAGCAATTGGCCTTCTGGAAGAGTAGGGATTTATAAGAATTCATTGTTTTTGATATATATGCTGTGGAATATGAATTTTCTCCTGCTCCGGCTCTCTTAGCGTTTAAGAAAATATTTACCAGCATAAACATGTAGCTAAAAATTTCCATTACTTAACTAATCCTGGATGCTTAAGTTTAGCTGTATGAGTGTTCTACATTTGAAGTTTATTGATTGCAATTTGCTAGTTGGAAATGCAACTAGAAAGGTTTGTTTTTATAAGTACTTTGAATGGATTGCCATTCAGATGTCACTGGATTATAGATGTCCATTTAACAACGAAAAAATAGAGAAGGGTGCGGGCAAATGTTTCTCCCCGTTAGCTAAATGAGGCTAGGGACGGGGATTATATTCTCCGTCCCTGTTCTCAGCCTTTATATACATCAAAACTAATACACAAGTCTAACCTATTATATATTTATATTATATTATACATACATATTTCTTGCTTCCATTCCATTTAAGTTGAGTTAGTATGTTTATTTTTTAAAAGTGTTTTAGACTTGTATTATTAAAATTTGAATTTTTAGAAATTAGATTAGTAGGACATTATATGGATATATTAAGATGTTTAACATTTTTTTAGAAATTAATATTGAAAAATGAAAATTACCCATTAAACCGTCTATTTAAAGGAATAATTTTAAAAAAATTATAATAGTAACGGGAAAAAATTCCTCACAGGAACCCGGTCCCTGGAAATTTCTCAAGGGAAATATCGATGAAAATAAATGGTGAATTTCACGAAAATGTGGATTAAAATAGGCGGCGGGGAAGGCTTCTTTGTCCCTGCCTCATCCCGTGGACATCTCTAATTGTTATAGAATGTTTTAGATTTTAGTTAAAGCTTGAAGTTTGGAGAGAAAATGTCTCAGGAGGGTTTGCTACTGTTTTGTGATGCACATATTTATCTTGCTCTTTCGTTTATCTTCTTGTGGTACTGAAGTGTTTGTAATTATATAGGAAACGACTCCATTAGCTGGAGCTTCAGCTGGTGCCATTGTCTGTGCCGTTATTGCCTCTGGAGCCAGTATGAAGGAGGCTTTAGAAGCTACTAAACTTCTGGCCGAAGACTGCAGGAGTAGAGGGACTGCATTTCGCCTTGGGGTATATCTCTGGTGAAGTAGGCCATTTCATTCATTTTCTTTATTGTTTGTGGTAAAATCTTGAGTGGAAAGACCTCTCGCTTGAATTTCATTAGAAGAACTCCATTTCTTTTTTATTCCTGATATTTGTATATCGTGTATCGTAAGTTTCAATTTATCCTCTTGCTCTAGGATCATTGTGAAATGGGAGATTTGCAATTCTTTCTTAACTCATGTACTGGTTTGAATTTTAATGTTTTCTCATCTAAATCCTCAGGCTGTACTCAGGGAAGTTCTTGAAAAGTTTCTTCCAGATGATGTACATATTAGGTGCAATGGAAGGGTCCGTGGTATGCATCCCTATTCGTTCTCTTTGGTCTCCGAACAAAATCACTAG

mRNA sequence

CACAAAAACCTCCGCCTGCAATTGAAATCAAAGCTCACACTTTCTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCCATGGCTCCTCCTCTCTCTTCTATTTCCCGCCCCTTTTCTTCCCCAATTACGAACCCTAATCTCAATTTCACACACAGATACACTCTTCCATTACGCACCCAAACTCTACGTTTCACTTCAAATTCTTCGTCTTCATCGTCGCCTCCACAGCCGCCACCGCCGGATCCCATTCCCGAGAAGAAGTCCTTCGCTGTAGCCACCGGGGACCTCTTATTGGGGCTGGCGGCGAGGTTGATTAGTCGTTCCTCCAAAAAAAGTTCGAATGGGGTTGCTATGTTCGAGAATCGCAGTGGAACCAAGAGCGAGTACGAGGAGAGAATTGGAGCGGTGGTTGAGGATGAGATTCAGCCTGATGTAGTGTGGGAGCAGCGGATTAAGGATGTTAAGGCTGAGCGAGAGCGGCGAGTCGTTACCAGTCCAGGGTTTAGCTTCTCTGCCGCTGGTTTGTTGTTTCCATATCATCTTGGAGTTGCGAAATTTCTCATTGAGCATAGCTATATCAAGGAAACGACTCCATTAGCTGGAGCTTCAGCTGGTGCCATTGTCTGTGCCGTTATTGCCTCTGGAGCCAGTATGAAGGAGGCTTTAGAAGCTACTAAACTTCTGGCCGAAGACTGCAGGAGTAGAGGGACTGCATTTCGCCTTGGGGCTGTACTCAGGGAAGTTCTTGAAAAGTTTCTTCCAGATGATGTACATATTAGGTGCAATGGAAGGGTCCGTGGTATGCATCCCTATTCGTTCTCTTTGGTCTCCGAACAAAATCACTAG

Coding sequence (CDS)

CACAAAAACCTCCGCCTGCAATTGAAATCAAAGCTCACACTTTCTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCCATGGCTCCTCCTCTCTCTTCTATTTCCCGCCCCTTTTCTTCCCCAATTACGAACCCTAATCTCAATTTCACACACAGATACACTCTTCCATTACGCACCCAAACTCTACGTTTCACTTCAAATTCTTCGTCTTCATCGTCGCCTCCACAGCCGCCACCGCCGGATCCCATTCCCGAGAAGAAGTCCTTCGCTGTAGCCACCGGGGACCTCTTATTGGGGCTGGCGGCGAGGTTGATTAGTCGTTCCTCCAAAAAAAGTTCGAATGGGGTTGCTATGTTCGAGAATCGCAGTGGAACCAAGAGCGAGTACGAGGAGAGAATTGGAGCGGTGGTTGAGGATGAGATTCAGCCTGATGTAGTGTGGGAGCAGCGGATTAAGGATGTTAAGGCTGAGCGAGAGCGGCGAGTCGTTACCAGTCCAGGGTTTAGCTTCTCTGCCGCTGGTTTGTTGTTTCCATATCATCTTGGAGTTGCGAAATTTCTCATTGAGCATAGCTATATCAAGGAAACGACTCCATTAGCTGGAGCTTCAGCTGGTGCCATTGTCTGTGCCGTTATTGCCTCTGGAGCCAGTATGAAGGAGGCTTTAGAAGCTACTAAACTTCTGGCCGAAGACTGCAGGAGTAGAGGGACTGCATTTCGCCTTGGGGCTGTACTCAGGGAAGTTCTTGAAAAGTTTCTTCCAGATGATGTACATATTAGGTGCAATGGAAGGGTCCGTGGTATGCATCCCTATTCGTTCTCTTTGGTCTCCGAACAAAATCACTAG

Protein sequence

HKNLRLQLKSKLTLSSPSSSSSSSSMAPPLSSISRPFSSPITNPNLNFTHRYTLPLRTQTLRFTSNSSSSSSPPQPPPPDPIPEKKSFAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVRGMHPYSFSLVSEQNH

Homology

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BLAST of Carg26429 vs. NCBI nr
Match: XP_023513040.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94
Identity = 223/236 (94.49%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 30  LSSISRPFSSPITNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA 89
           LSSISRPFSSPITNP             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA
Sbjct: 5   LSSISRPFSSPITNPNINFTHRYTLPLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA 64

Query: 90  VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR 149
           VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR
Sbjct: 65  VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR 124

Query: 150 IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIVCA 209
           IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIVCA
Sbjct: 125 IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIVCA 184

Query: 210 VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR
Sbjct: 185 VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 240

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BLAST of Carg26429 vs. NCBI nr
Match: XP_022981351.1 (patatin-like phospholipase domain-containing protein 4 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 5.2e-93
Identity = 230/236 (97.46%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 30  LSSISRPFSSPITNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA 89
           LSSISR FSSPITNP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA
Sbjct: 5   LSSISRSFSSPITNPNLNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFA 64

Query: 90  VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR 149
           VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR
Sbjct: 65  VATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWEQR 124

Query: 150 IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIVCA 209
           IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEH+YIKETTPLAGASAGAIVCA
Sbjct: 125 IKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHNYIKETTPLAGASAGAIVCA 184

Query: 210 VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR
Sbjct: 185 VIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 240

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BLAST of Carg26429 vs. NCBI nr
Match: XP_022943045.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 8.9e-93
Identity = 225/238 (94.54%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 30  LSSISRPFSSPITNP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 89
           LSSISRPFSSPITNP             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS
Sbjct: 5   LSSISRPFSSPITNPNLNFTHRYTLPLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 64

Query: 90  FAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWE 149
           FAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWE
Sbjct: 65  FAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVWE 124

Query: 150 QRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIV 209
           QRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIV
Sbjct: 125 QRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIV 184

Query: 210 CAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           CAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR
Sbjct: 185 CAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 242

[Close]

BLAST of Carg26429 vs. NCBI nr
Match: XP_004149962.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativus] >KGN57568.1 hypothetical protein Csa_3G214570 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 3.6e-78
Identity = 184/238 (77.31%), Postives = 202/238 (84.87%), Query Frame = 0


Query: 30  LSSISRPFSSPITNP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSF 89
           LSSIS PFSSPITNP                      XXXXXXXXXXXXXXXXXX   SF
Sbjct: 6   LSSISHPFSSPITNPNLNFTHRFSLPLRSQTLRFISNXXXXXXXXXXXXXXXXXXEKRSF 65

Query: 90  AVATGDLLLGLAARLISRSSKKSSNGVAMFENRSG-TKSEYEERIGAVVEDEIQPDVVWE 149
           AVATG+L LGLAARLI RSS ++S  V+MF+NRSG  ++ YEERIGAVVEDEIQP V+WE
Sbjct: 66  AVATGELFLGLAARLIKRSSDQTSKSVSMFDNRSGNNRNVYEERIGAVVEDEIQPGVLWE 125

Query: 150 QRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIV 209
           QR+KDV+AERER +VTSPGFSFSAAGLLFPYHLGVAKFL+E++YIKETTPLAGASAGAIV
Sbjct: 126 QRVKDVEAERERPLVTSPGFSFSAAGLLFPYHLGVAKFLLENAYIKETTPLAGASAGAIV 185

Query: 210 CAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           CAVIASGASM+EAL+ATK+LAEDCRSRGTAFRLGAVLREVL+KFLPDDVHIRCNGRVR
Sbjct: 186 CAVIASGASMQEALQATKILAEDCRSRGTAFRLGAVLREVLDKFLPDDVHIRCNGRVR 243

[Close]

BLAST of Carg26429 vs. NCBI nr
Match: XP_008456089.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 4.0e-77
Identity = 193/241 (80.08%), Postives = 209/241 (86.72%), Query Frame = 0


Query: 30  LSSISRPF-SSPITNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 89
           LSSIS PF SSPITNP                    XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 6   LSSISHPFSSSPITNPNLNFTCRFPLPLRSQTLRFIXXXXXXXXXXXXXXXXXXXXXXXX 65

Query: 90  XSFAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSG-TKSEYEERIGAVVEDEIQPDV 149
           XS AVATG+L LGLAARLI RSS ++SN V+MF+NR+G  +S YEERIGAVVEDEIQP V
Sbjct: 66  XSLAVATGELFLGLAARLIKRSSDQTSNSVSMFDNRTGNNRSVYEERIGAVVEDEIQPGV 125

Query: 150 VWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAG 209
           +WEQR+KDV+AERER +VTSPGFSFSAAGLLFPYHLGVAKFL+E+SYIKETTPLAGASAG
Sbjct: 126 LWEQRVKDVEAERERPLVTSPGFSFSAAGLLFPYHLGVAKFLLENSYIKETTPLAGASAG 185

Query: 210 AIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRV 266
           AIVCAVIASGASM+EAL+ATKLLAEDCRSRGTAFRLGAVLREVL+KFLPDDVHIRCNGRV
Sbjct: 186 AIVCAVIASGASMQEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLPDDVHIRCNGRV 245

[Close]

BLAST of Carg26429 vs. TAIR10
Match: AT1G33270.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61
Identity = 119/179 (66.48%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 87  SFAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQPDVVW 146
           SFAVATG+L +G+A+RL+  S++K+               +  +RI +V+EDEI+P ++W
Sbjct: 52  SFAVATGELFIGIASRLLKSSNQKT------------PPIDDGDRIASVIEDEIEPAMIW 111

Query: 147 EQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAI 206
           EQR+KDV+AE+ERRV+TSPGFSFSAAGLLFPYHLGVA+ LIE  YIKETTPLAG+SAGAI
Sbjct: 112 EQRVKDVEAEKERRVITSPGFSFSAAGLLFPYHLGVAQLLIEKGYIKETTPLAGSSAGAI 171

Query: 207 VCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           VCAVI SGA+M+EALEATK LA DCR  GTAFRLGAVLRE +E+ LPDD+HIR NGR+R
Sbjct: 172 VCAVITSGATMREALEATKELAYDCRRNGTAFRLGAVLRESMERLLPDDIHIRSNGRIR 218

[Close]

BLAST of Carg26429 vs. Swiss-Prot
Match: sp|Q9NST1|PLPL3_HUMAN (1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 OS=Homo sapiens OX=9606 GN=PNPLA3 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-07
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 168 SFSAAGLLFPYHLGVAKFLIEHS--YIKETTPLAGASAGAIVCAVIASGASMKEALEATK 227
           SF+  G L  YH+G  + L EH+   +++   L GASAGA+ C  + SG  +++ L+   
Sbjct: 11  SFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLFGASAGALHCVGVLSGIPLEQTLQVLS 70

Query: 228 LLAEDCRSRG-----TAFRLGAVLREVLEKFLPDDVHIRCNGRV 265
            L    RSR       +F L   LR+ L K LP +VH   +G++
Sbjct: 71  DLVRKARSRNIGIFHPSFNLSKFLRQGLCKCLPANVHQLISGKI 114

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BLAST of Carg26429 vs. TrEMBL
Match: tr|A0A0A0L746|A0A0A0L746_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.4e-78
Identity = 184/238 (77.31%), Postives = 202/238 (84.87%), Query Frame = 0


Query: 30  LSSISRPFSSPITNP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSF 89
           LSSIS PFSSPITNP                      XXXXXXXXXXXXXXXXXX   SF
Sbjct: 6   LSSISHPFSSPITNPNLNFTHRFSLPLRSQTLRFISNXXXXXXXXXXXXXXXXXXEKRSF 65

Query: 90  AVATGDLLLGLAARLISRSSKKSSNGVAMFENRSG-TKSEYEERIGAVVEDEIQPDVVWE 149
           AVATG+L LGLAARLI RSS ++S  V+MF+NRSG  ++ YEERIGAVVEDEIQP V+WE
Sbjct: 66  AVATGELFLGLAARLIKRSSDQTSKSVSMFDNRSGNNRNVYEERIGAVVEDEIQPGVLWE 125

Query: 150 QRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAGAIV 209
           QR+KDV+AERER +VTSPGFSFSAAGLLFPYHLGVAKFL+E++YIKETTPLAGASAGAIV
Sbjct: 126 QRVKDVEAERERPLVTSPGFSFSAAGLLFPYHLGVAKFLLENAYIKETTPLAGASAGAIV 185

Query: 210 CAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRVR 266
           CAVIASGASM+EAL+ATK+LAEDCRSRGTAFRLGAVLREVL+KFLPDDVHIRCNGRVR
Sbjct: 186 CAVIASGASMQEALQATKILAEDCRSRGTAFRLGAVLREVLDKFLPDDVHIRCNGRVR 243

[Close]

BLAST of Carg26429 vs. TrEMBL
Match: tr|A0A1S3C2I5|A0A1S3C2I5_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.7e-77
Identity = 193/241 (80.08%), Postives = 209/241 (86.72%), Query Frame = 0


Query: 30  LSSISRPF-SSPITNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 89
           LSSIS PF SSPITNP                    XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 6   LSSISHPFSSSPITNPNLNFTCRFPLPLRSQTLRFIXXXXXXXXXXXXXXXXXXXXXXXX 65

Query: 90  XSFAVATGDLLLGLAARLISRSSKKSSNGVAMFENRSG-TKSEYEERIGAVVEDEIQPDV 149
           XS AVATG+L LGLAARLI RSS ++SN V+MF+NR+G  +S YEERIGAVVEDEIQP V
Sbjct: 66  XSLAVATGELFLGLAARLIKRSSDQTSNSVSMFDNRTGNNRSVYEERIGAVVEDEIQPGV 125

Query: 150 VWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGASAG 209
           +WEQR+KDV+AERER +VTSPGFSFSAAGLLFPYHLGVAKFL+E+SYIKETTPLAGASAG
Sbjct: 126 LWEQRVKDVEAERERPLVTSPGFSFSAAGLLFPYHLGVAKFLLENSYIKETTPLAGASAG 185

Query: 210 AIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNGRV 266
           AIVCAVIASGASM+EAL+ATKLLAEDCRSRGTAFRLGAVLREVL+KFLPDDVHIRCNGRV
Sbjct: 186 AIVCAVIASGASMQEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLPDDVHIRCNGRV 245

[Close]

BLAST of Carg26429 vs. TrEMBL
Match: tr|A0A067KRQ0|A0A067KRQ0_JATCU (Patatin OS=Jatropha curcas OX=180498 GN=JCGZ_05048 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.9e-69
Identity = 138/187 (73.80%), Postives = 166/187 (88.77%), Query Frame = 0


Query: 87  SFAVATGDLLLGLAARLISRSSKK-----SSNGVAMFENRSGTKS---EYEERIGAVVED 146
           SFAVATG+L LG+A+RL+   S+      SS+G+++FE  +G +S   +YEERIGAV+ED
Sbjct: 86  SFAVATGELFLGIASRLLKSGSRSKNGSFSSSGISLFEKSNGKESGDVDYEERIGAVMED 145

Query: 147 EIQPDVVWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPL 206
           EI+PDV+WEQR+KD++AE+ERRV+TSPGFSFSAAGLLFPYHLGV++ LIE  YIKETTPL
Sbjct: 146 EIEPDVIWEQRVKDIEAEKERRVITSPGFSFSAAGLLFPYHLGVSQLLIEKGYIKETTPL 205

Query: 207 AGASAGAIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHI 266
           AG+SAGAIVCAVIASGASM+EAL+ATK+LAEDCR RGTAFRLGAVLR+VLEKFLPDDVHI
Sbjct: 206 AGSSAGAIVCAVIASGASMQEALQATKILAEDCRLRGTAFRLGAVLRDVLEKFLPDDVHI 265

[Close]

BLAST of Carg26429 vs. TrEMBL
Match: tr|A0A2P4JRL8|A0A2P4JRL8_QUESU (Patatin OS=Quercus suber OX=58331 GN=CFP56_49797 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.8e-68
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 87  SFAVATGDLLLGLAARL-ISRSSKKSSNG----VAMFENRSG--------TKSEYEERIG 146
           SFAVATG+L LGLA+RL I R   K  NG    VAMFE+ +G        + S  +ERIG
Sbjct: 64  SFAVATGELFLGLASRLFIRRGPSKGPNGEVGSVAMFEDLNGSGFYANGSSSSSSKERIG 123

Query: 147 AVVEDEIQPDVVWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIK 206
           AV+EDEI+PDVVWEQR+KDV+AER+RRVVTSPGFSFSAAGLLFPYHLGVA+FLIE  YIK
Sbjct: 124 AVMEDEIEPDVVWEQRVKDVEAERQRRVVTSPGFSFSAAGLLFPYHLGVAQFLIEKGYIK 183

Query: 207 ETTPLAGASAGAIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLP 266
           ETTPLAG+SAGAIVCAVIASGASM+EAL+ATK+LAEDCR+RGTAFRLGAVLR+VLEKFLP
Sbjct: 184 ETTPLAGSSAGAIVCAVIASGASMEEALKATKILAEDCRNRGTAFRLGAVLRDVLEKFLP 243

[Close]

BLAST of Carg26429 vs. TrEMBL
Match: tr|A0A251RJ53|A0A251RJ53_PRUPE (Patatin OS=Prunus persica OX=3760 GN=PRUPE_1G566300 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 139/183 (75.96%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 87  SFAVATGDLLLGLAARLISRSS----KKSSNGVAMFENRSGTKSEYEERIGAVVEDEIQP 146
           SFAVATG+L LGLA+R+I R +     K+++ VAMFE  S  K+  +ERIG V+EDEI+P
Sbjct: 89  SFAVATGELFLGLASRIIKRPNGGPDGKAASSVAMFE--SSGKNYLDERIGKVMEDEIEP 148

Query: 147 DVVWEQRIKDVKAERERRVVTSPGFSFSAAGLLFPYHLGVAKFLIEHSYIKETTPLAGAS 206
           DVVWEQR+KDV+AE+ERRVVTSPGFSFSAAGLLFPYHLG A+FLI++ YIKETTPLAG+S
Sbjct: 149 DVVWEQRVKDVEAEKERRVVTSPGFSFSAAGLLFPYHLGAAQFLIQNGYIKETTPLAGSS 208

Query: 207 AGAIVCAVIASGASMKEALEATKLLAEDCRSRGTAFRLGAVLREVLEKFLPDDVHIRCNG 266
           AGAIVCAVIASGASM+EAL+ATK+LAEDCR+RGTAFRLGAVLR+VL+KFLPDD HIR NG
Sbjct: 209 AGAIVCAVIASGASMEEALQATKILAEDCRNRGTAFRLGAVLRDVLQKFLPDDAHIRSNG 268

The following BLAST results are available for this feature:

BLAST of Carg26429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513040.1	2.8e-94	94.49	patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pe...	[more]
XP_022981351.1	5.2e-93	97.46	patatin-like phospholipase domain-containing protein 4 [Cucurbita maxima]	[more]
XP_022943045.1	8.9e-93	94.54	patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]	[more]
XP_004149962.1	3.6e-78	77.31	PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativ...	[more]
XP_008456089.1	4.0e-77	80.08	PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo]	[more]

BLAST of Carg26429 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33270.1	2.2e-61	66.48	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]

BLAST of Carg26429 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9NST1\|PLPL3_HUMAN	3.9e-07	34.62	1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 OS=Homo sapiens OX=9606 GN=P...	[more]

BLAST of Carg26429 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L746\|A0A0A0L746_CUCSA	2.4e-78	77.31	Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1	[more]
tr\|A0A1S3C2I5\|A0A1S3C2I5_CUCME	2.7e-77	80.08	Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1	[more]
tr\|A0A067KRQ0\|A0A067KRQ0_JATCU	5.9e-69	73.80	Patatin OS=Jatropha curcas OX=180498 GN=JCGZ_05048 PE=3 SV=1	[more]
tr\|A0A2P4JRL8\|A0A2P4JRL8_QUESU	3.8e-68	76.04	Patatin OS=Quercus suber OX=58331 GN=CFP56_49797 PE=3 SV=1	[more]
tr\|A0A251RJ53\|A0A251RJ53_PRUPE	1.1e-67	75.96	Patatin OS=Prunus persica OX=3760 GN=PRUPE_1G566300 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process
GO:0006629	lipid metabolic process
GO:0016042	lipid catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016035	Acyl_Trfase/lysoPLipase
IPR002641	PNPLA_dom
IPR033562	PLPL

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26429-RA	Carg26429-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.1090.10		coord: 147..251 e-value: 4.2E-8 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..86
None	No IPR available	PANTHER	PTHR12406:SF7	BRUMMER, ISOFORM B-RELATED	coord: 136..265
IPR033562	Patatin-like phospholipase domain-containing protein	PANTHER	PTHR12406	CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED	coord: 136..265
IPR002641	Patatin-like phospholipase domain	PROSITE	PS51635	PNPLA	coord: 167..280 score: 12.492
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	SSF52151	FabD/lysophospholipase-like	coord: 166..264

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26429	Cla013045	Watermelon (97103) v1	carwmB0063
Carg26429	Csa3G214570	Cucumber (Chinese Long) v2	carcuB0064
Carg26429	MELO3C019485	Melon (DHL92) v3.5.1	carmeB0064
Carg26429	ClCG05G009760	Watermelon (Charleston Gray)	carwcgB0064
Carg26429	CSPI03G18830	Wild cucumber (PI 183967)	carcpiB0068
Carg26429	Cucsa.049520	Cucumber (Gy14) v1	carcgyB0069
Carg26429	CmaCh04G005150	Cucurbita maxima (Rimu)	carcmaB0086
Carg26429	CmoCh04G005540	Cucurbita moschata (Rifu)	carcmoB0090
Carg26429	Lsi05G001890	Bottle gourd (USVL1VR-Ls)	carlsiB057
Carg26429	Cp4.1LG01g01960	Cucurbita pepo (Zucchini)	carcpeB0094
Carg26429	CsGy3G018680	Cucumber (Gy14) v2	carcgybB0064
Carg26429	MELO3C019485.2	Melon (DHL92) v3.6.1	carmedB0064
Carg26429	CsaV3_3G018910	Cucumber (Chinese Long) v3	carcucB0070
Carg26429	Cla97C05G092130	Watermelon (97103) v2	carwmbB0062
Carg26429	Bhi01G001229	Wax gourd	carwgoB0075

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26429	Silver-seed gourd	carcarB075
Carg26429	Cucumber (Gy14) v2	carcgybB0065
Carg26429	Cucurbita maxima (Rimu)	carcmaB0085
Carg26429	Cucurbita moschata (Rifu)	carcmoB0089
Carg26429	Cucurbita pepo (Zucchini)	carcpeB0093
Carg26429	Wild cucumber (PI 183967)	carcpiB0069
Carg26429	Cucumber (Chinese Long) v2	carcuB0065
Carg26429	Cucumber (Chinese Long) v3	carcucB0071