Carg26184 (gene) Silver-seed gourd

Overview
NameCarg26184
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
LocationCucurbita_argyrosperma_scaffold_219 : 34978 .. 40244 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCGTAAGCATTTCACCCTTCTACCTCCAAATTTGTTGCAAAATTAGTATCTCTTCGATGTAGATTATGTAGGACTTATGATCAGTTTTTCCATTTTTAGCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGGTATCTCGATTCTCTTGAGGATTTTGTATTTTCATTTCTCCGACAATTTGTATGTTTATTTTGTTTTTGTTCTTGTTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGTAAGTTTACTGAACTAGACATCTTTTGTGGATCTTTTGTGGATCTTTTGTACTCCGTTCTCTGTTGGACTATTTGATATCTTACCTGCATTGGTGCTTGACTGTTGAAGGATACATTTGTTGTTTGTTGTTCATTACTGTAACGGCCAAGTCCACCGCTAGTAGATATTATCTTCCTTGGACTTTCCCTAAAGGTTTTAAAACACACGTCTCGTAGGGGAAGTTTCCACACCCTTATAATCAATGCTTCATTCTCCTCTCCAATTGATGGTGGGATCTCACAATCCACCCTCTTGGGGGCCAGCATCCTCGCTGGCACACCTCCCGGTGTCTGGCTCTGAAACCATTTGTAATGGTCTAAGCCCATTGCTGACAGATATTGTCCTGTTTGGGCTTTTCCTTCCGGGCTTCACCTTAAGGTTTTAAAATGCATATCTCGTAGAGAGAGGTTTCTACACCCTTAGGGATGCTTCGTTCTCCTCTCCAACTGATGTGGGATCTCACCATTACCGCGCATTTTGTGAAATATGGTGGTACTCAGTTCAGTGCATTATTTGGATTGAATTTTCTTTTCTCATGAAATCATATTGGGATAATTGTGCTATGTATACCGCATTTTATTTCTTTTGAGATGGGCTGAGCTAGAGAAATAACTCTTGAGATGTCTAACTTATAATTTGGTGCAAAGCAGAACAGTTTTCTAGATTAATTCTATCCTTCCCCACTATGAGTATCTGTGTAACATTCCTAGCCCAGTAGTAAGAGATTTTGCTAACCGTAGTACCAGGTCAAAGAGCTTGTTATGACTCGCGATTCGTTTTTTGTAGACCCTGGCCTGATGCAAGGCATCCTTATTGACGGGCACACCTTTTTCAATAACTGGAGTGTTATTCTCCCTTCTATGTCCAAGCAATGAGGTTCTGGGAGAGTAAGAAGGATAATAGGAGCATGTTAGAGGAGTTAGACAGCAGGGAAGGAAAGGGAGATGAGAGGTTATTATTAATATTGAATCATAGTCTTAACACTCTCGTTCCATTTGTGTGCGTGAAAATTAGTAAAAGGCTCAACAAGTGATCCTTAATATTAATTGAGAAAAGGAAATTACTAGCTTTTAAACTTATCTTTTGCTCTTATACCCTGTTGGTTGATCATTAGAACATCCAAAAGCTTAAACTGATAGGTTTTGGTATGTTCAATATTTATTCTTATTCTTAATCTGGAGAAGTTATCTTAGTTGGACGTTGGAGAAAGTCATCTTGAATCTAGCCTTTGGGAATAAAGGGCATGTTTATGGCTGGCCTAGCCTATTCCCTCAACATCATGTGGTTAGTTTGATTGGATAGAAATAGATCTTTTCTTGGGTTTATGAAAGACAACTCCAACTCAAAGGAATGACAACAAATATCTCCAATTGGGAAAAAGAGAAGCAAAACTATAAGAATGGAATTATTATGTAATTTACACCAAGAGCTAGGTAGATGACATTATCGAGGAATCTATAATAATCACAATCTTTCCCACAAAAGGCCTTTGATTTTTCCCCAACCAAGTAGACCAAAAGAAGGCCCGAACGTGGTGTTTCCATAGTAGCTCATTCTCTTTCTTAAAAGGATGACCCACGAGAGTATGAGAAAGAAGCACTTTTGGGTCTTTTGGAAGAGCCATGGTCCTGTTGAAGGAGGATAACATTTCGACCCAAATCCTTGATGCCAAAGAAGTGAGTAGGGGTATCCTCCTTTCATTATTTCAAGCACAACAAGTGAGTAGGGGTATCCTCCTACCATTTTTAAGAACAAGTGAGTAAGGGTAGGGGTATGAGGGATTTTCAAGAAACAACATTTCGTTGAAAATAATGAATATTCAAACAAAGAAAGGGGCGTGCAAAAATACTAGCTCCAAAAGATGGTCCATCCTCAACTACGGAGGAACTTACCAATCCATTGTGTCCTAACTGATAGTTATAAAGCTCTCTAGAAACTGAAGCCCACAAAGAGGTTGGAAATTTGACATTTTCTCACACTTCTTCCTCAGATCTCTCACAACCTTTGAAAATTCTACTACCACTCGAGCCATGTACCCCAGAAAACTGCAAAAGACGCATGCCAAATGACCCAAAAATCTCTAGTTTGCATTCCATAGAACTTCCTCCATTATTGAGCAACAATCCCTATTAGTACCTACAAGTCCTAAATGACCCAAAAAAATTGTCCAAAAGCGAGTTGGCAATCTGACAACTCTATAGAAAATTGTTAAGGTACTCAGAACCTGTCTACAATACATAAGGTCCTCCACTGAGTACTCAGCAAGAAGGAAGAAGGCTTCCGATGGCAATCCTCCCCTGTAATACCTGCCACACAAAGAATATTACCTTCTGGTGGATCTTAACCTTCCAGAGAGAGGCAAATAGAAGGGTACCAAGGGGGACGAAGACACAAAGGAGGTGAAAATAAGAAATGCAAGAGGAGGATTGTGCAAGGAGATGCAGCCACAAACAAAGGCTGATCGTAATTGTTGACAGATGCATTAGAAGCGACGTTAGGACACCCTATAGTTTCTCCAGCCTACAGCAAATTGGGCCTTCTTTTCTTTTTGACCCAGGATAGTCTCCTCTGAAAAAAGAGCCTGATTTAACAGATTTATCTGAGCTGCACACGCCCTCTTAGAAATCGAAGGGGACCCACTCTTTGCAGTTTGAAACACTTCACCTGGTTGCTAGAATACACTTGGCTACCTGTCTTAGACGTCAAAATCAACTTCTGAAAGAGCGTCAAAAAAGGAAGGTGAACTTCTGAAAGAGCGTCCAACTAAGATATAAACCATTTTTAGCTGATATTGACATATCTGATAGTTGGGAAAACAAAAGCTAAAATTGAACCCGCTACTGACCAACTCTTCCATTTTTCCAACTGTGAAGACACGAGATAAGAGAATGGAAGCAACTTTATTGAAAGTTTTTCCTGTATTCCTTTTTGCCCAAAAAAAAAAGTATTCTTTCACCCACAAACCTCACAGAAAGGGAATGTGATATCCCCACAGAGCCAATGGGTTATGAAAATAGACTCCCAATGGGCATTAATATGCACGAGGTCATCATTACGGAAGCCTCGAGAGAGGGTGCACCAAGTGGAGTCAAAATTTTTCACAAGATCCCCTAATTCCTCAAGAGTACGCTATTTCCCTTTAGAAGTTCTTTGGTTTCTCTTGAACCAGTCTCCAAAGATTGGCTGTCATGGCGTTGGACCATAAAACAAGAGCCTGCCCTTGAAAGGAGAGCCTTCCAAAAGCCGGTAAGGGGTGGTTTAACAATCTTTTGGGGACACTAGTCTAAGCCAAAAGAATGAAAGAGCTTTGATTTCGATGAACTAGCAGCCATGAAAGGGCCATTGCAAAGATACGTGAGGATGACTCTCTAAATTACTTTTTCACATGATGCATCAGGTAGTGCAAACTGGCATATTTGGGAGTTTCCTTTGGATCCAAGAACTAGTTTTCAATGTTCTTGAATAAAAGATCAAGGGAAAACTTTCATCTTCTTTGGAACCTTGGCCTTTCAAATCACACTGATTTGGAATTAATGAACAACGTGGGAATATCTACCTTCTAGAATCCTGCTGGGTGCTAGGCTGATCGTGGCTGATCAGGTTTTGGAGTCTAATTCAATATCAGACAGATTCCTTCTAAACTGCAATTTCTACGGGTGGGTGTCTTATGACCAGCAATGATTCATGGTGAAGTGCTTTGATTTCGCTACACTGTCAAGTCTTTGGAAGGAAAGTTTGAGAGGGCTACTACCTGTCAGCCCTCTCCCCAGAAAATTTCATCTTCTTAGGAGTGAAATTCCGAAGCTTTGTGAAAAAGGAGATGGATATATAGGCAAATGTTTTCAACTTGGATTATAGCTTAGCTACTTACGACATATGCTTTTGACTAAGAGGTCAGAAATTCAAATTAAGAGGTCAAAAGTTTAAATCTCTCCTTGCAAATATGCGAAAAAGAATATACGGGCAAGTGTTTCTTCCAAATATAGGTTCCACAGAGAATGTATTCTTGTTGTGGTTGTTTGTATAGCCTGGCCTTGTATACTTTATGGTGTTTTTCAGTCGTTACGTTTACTTGACATTTGCATAGAAATCGAACTATTGGCCGTGTTTCAACTCTTTGAAGCCTTGATGTTTTATTTTCTGGATGAATTTAGCATTGATAAGATGATTGATAATAAACTTGATCCTCCTTTTAATCAGGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT

mRNA sequence

CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT

Coding sequence (CDS)

ATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Protein sequence

MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA
Homology
[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 2.6e-68
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 8.5e-67
Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_023553279.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 126

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_004147198.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_3G021140 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_022950674.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata] >XP_023538880.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of Carg26184 vs. TAIR10
Match: AT5G47570.1 (unknown protein)

HSP 1 Score: 224.9 bits (572), Expect = 2.7e-59
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLS + SRI+GGNGVVARS+ SSLR+R+GMGLPVGKHIVP+KPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Carg26184 vs. Swiss-Prot
Match: sp|Q9FGK0|NDUB8_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 4.9e-58
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLS + SRI+GGNGVVARS+ SSLR+R+GMGLPVGKHIVP+KPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Carg26184 vs. TrEMBL
Match: tr|A0A1S3BK37|A0A1S3BK37_CUCME (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. TrEMBL
Match: tr|A0A0A0L5J8|A0A0A0L5J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. TrEMBL
Match: tr|W9R278|W9R278_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019050 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61
Identity = 114/125 (91.20%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSN+ S+I+GGNGVV RS+ SSLR RSGMGLPVGKHIVP KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNVASKIMGGNGVVCRSVASSLRLRSGMGLPVGKHIVPEKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLG LAVWNDKASKIPF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Carg26184 vs. TrEMBL
Match: tr|A0A1Q3DBK7|A0A1Q3DBK7_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33328 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-61
Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSN+ SRI+GGNGVV RS+ SSLR RSGMGLPVGKHIVP KPLPVNDEL+WDNGTP
Sbjct: 1   MAGRLSNVASRIMGGNGVVGRSVASSLRLRSGMGLPVGKHIVPEKPLPVNDELMWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADT+GKYEALAWLCGGLGFFASLG LAVWNDKASKIPF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTIGKYEALAWLCGGLGFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Carg26184 vs. TrEMBL
Match: tr|A0A2C9WL26|A0A2C9WL26_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G079000 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.5e-61
Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRL N+ SRI+GGNGVV+RS+ SSLR RSGMGLPVGKHIVP KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLCNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPEKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLG LAVWNDKASKIP+ PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLAVWNDKASKIPYTPKVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:
BLAST of Carg26184 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923346.12.6e-68100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022965223.18.5e-6798.43NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_023553279.11.2e-6597.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_004147198.12.0e-6392.91PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochon... [more]
XP_022950674.11.3e-6292.13NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
BLAST of Carg26184 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47570.12.7e-5984.00unknown protein[more]
BLAST of Carg26184 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FGK0|NDUB8_ARATH4.9e-5884.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar... [more]
BLAST of Carg26184 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BK37|A0A1S3BK37_CUCME1.3e-6392.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
tr|A0A0A0L5J8|A0A0A0L5J8_CUCSA1.3e-6392.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1[more]
tr|W9R278|W9R278_9ROSA1.2e-6191.20Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019050 PE=4 SV=1[more]
tr|A0A1Q3DBK7|A0A1Q3DBK7_CEPFO1.6e-6190.40Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33328 PE=4... [more]
tr|A0A2C9WL26|A0A2C9WL26_MANES3.5e-6190.40Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G079000 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038863Put_Complex_I_su8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26184-RACarg26184-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401FAMILY NOT NAMEDcoord: 10..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26184CmaCh16G011460Cucurbita maxima (Rimu)carcmaB0697
Carg26184CmoCh16G011970Cucurbita moschata (Rifu)carcmoB0677
Carg26184Cp4.1LG14g09440Cucurbita pepo (Zucchini)carcpeB0702
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None