Carg26081 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26081
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AP2-like ethylene-responsive transcription factor family
Location	Cucurbita_argyrosperma_scaffold_145 : 312607 .. 313811 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGCCTGGATTGTGTCAACAGCATAATTTATGGTAAGTTTTCCAAAATTGTTATTATACCATGTCTCTAGCTTCAAGGACACATCTCTGCTGGAATTTCTTTGATTTCTGAGTTTACACTTAAAGAGGACAAGAATTTCTCTCATGTGAATAACAAACAGTGCTTTCCCCCCAATGTAATTTAAGGTGCCGGGGATGATCAAGCAACGGTAAGCGAATTCATCCACAACTTCTGCATTGAAAGGAAGATCGACTTAACAAGTTACATTAAGTGGTGGGGGCCCAACAAAAATCGAACGTCTAGTGTTGGATCGAAGTTGTCAGAAGAAGACAAACATAGTAGCGTTGGAGAAGTAGACAGTGAACTCAAAGCTCTTGGACAGACCACCTGTCCCACAGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGGGGTAAAGAAGGTTGCTTCGAAGGTCTCTGCTTTAAGTATTTTGTCACGGTCAGCAGCCTACAAGAGTTTGCAGCAGAAAGCTTTGAAATTAGAGGAAATTAACAATGAGAATGATGAGAACGAAAATAAAAACAGTGTCAACAAGATAGATCATGGGAAAGCTGTTGAAACACATGCAAGTCATGGAGGTGATCCCAGTGAGAAATATGGGGTTGCTTTTGGAGCAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTCCATTCTTAACTGCACCTCTTCTTAGCAGTTACAACACTGTTGATCCCTTGGGAGATCCGATTCATTGGACATCGCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTACTGCCGAGGTTAGCGTATTCACTATCCTTGTTTGGAGTAAAGTAAAGTGAAATTGTTGTGTGAATTTGAGATGGCTTTTAGAAGGATAAAAGTTACTTTTAGCAAAAGAAAATAAATTTTATGGTGCTTGGTTACATATTCAAAGGCAATTTCTGATAATGTTTGTCTCGGCTCCATTATGCAGGTTACAAAGACCGAAACCTCTTCAACTTACACTTTGTTTCGACCGGAGGAATAAAGTTCAAGGAATTTATTATCTCCCCCCCAGGATGGGGTTTGAGTTGAACTTGATTGGACAGCGCTCGATGCTGATATTGCTGGATCCCTAAATGAGAATAAGCTTTAAGGGGTAGAGATTTACATAAATCAAAATATCACAAGAACACGA

mRNA sequence

ATGCCAGGCCTGGATTGTGTCAACAGCATAATTTATGGTGCCGGGGATGATCAAGCAACGGTAAGCGAATTCATCCACAACTTCTGCATTGAAAGGAAGATCGACTTAACAAGTTACATTAAGTGGTGGGGGCCCAACAAAAATCGAACGTCTAGTGTTGGATCGAAGTTGTCAGAAGAAGACAAACATAGTAGCGTTGGAGAAGTAGACAGTGAACTCAAAGCTCTTGGACAGACCACCTGTCCCACAGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGGGGTAAAGAAGGTTGCTTCGAAGGTCTCTGCTTTAAGTATTTTGTCACGGTCAGCAGCCTACAAGAGTTTGCAGCAGAAAGCTTTGAAATTAGAGGAAATTAACAATGAGAATGATGAGAACGAAAATAAAAACAGTGTCAACAAGATAGATCATGGGAAAGCTGTTGAAACACATGCAAGTCATGGAGGTGATCCCAGTGAGAAATATGGGGTTGCTTTTGGAGCAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTCCATTCTTAACTGCACCTCTTCTTAGCAGTTACAACACTGTTGATCCCTTGGGAGATCCGATTCATTGGACATCGCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTACTGCCGAGGTTACAAAGACCGAAACCTCTTCAACTTACACTTTGTTTCGACCGGAGGAATAAAGTTCAAGGAATTTATTATCTCCCCCCCAGGATGGGGTTTGAGTTGAACTTGATTGGACAGCGCTCGATGCTGATATTGCTGGATCCCTAAATGAGAATAAGCTTTAAGGGGTAGAGATTTACATAAATCAAAATATCACAAGAACACGA

Coding sequence (CDS)

ATGCCAGGCCTGGATTGTGTCAACAGCATAATTTATGGTGCCGGGGATGATCAAGCAACGGTAAGCGAATTCATCCACAACTTCTGCATTGAAAGGAAGATCGACTTAACAAGTTACATTAAGTGGTGGGGGCCCAACAAAAATCGAACGTCTAGTGTTGGATCGAAGTTGTCAGAAGAAGACAAACATAGTAGCGTTGGAGAAGTAGACAGTGAACTCAAAGCTCTTGGACAGACCACCTGTCCCACAGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGGGGTAAAGAAGGTTGCTTCGAAGGTCTCTGCTTTAAGTATTTTGTCACGGTCAGCAGCCTACAAGAGTTTGCAGCAGAAAGCTTTGAAATTAGAGGAAATTAACAATGAGAATGATGAGAACGAAAATAAAAACAGTGTCAACAAGATAGATCATGGGAAAGCTGTTGAAACACATGCAAGTCATGGAGGTGATCCCAGTGAGAAATATGGGGTTGCTTTTGGAGCAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTCCATTCTTAACTGCACCTCTTCTTAGCAGTTACAACACTGTTGATCCCTTGGGAGATCCGATTCATTGGACATCGCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTACTGCCGAGGTTACAAAGACCGAAACCTCTTCAACTTACACTTTGTTTCGACCGGAGGAATAA

Protein sequence

MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEEDKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRSAAYKSLQQKALKLEEINNENDENENKNSVNKIDHGKAVETHASHGGDPSEKYGVAFGASGGLPLQRNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRPEE

Homology

[Close]

BLAST of Carg26081 vs. NCBI nr
Match: XP_023540970.1 (AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.8 bits (1052), Expect = 6.2e-111
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE
Sbjct: 187 MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 246

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX 120
           DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX
Sbjct: 247 DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX 306

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQRN 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQRN
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQRN 366

Query: 181 MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRPE 240
           MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRPE
Sbjct: 367 MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRPE 426

Query: 241 E 242
           E
Sbjct: 427 E 427

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BLAST of Carg26081 vs. NCBI nr
Match: XP_022973333.1 (AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 227/241 (94.19%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           M G DCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE
Sbjct: 187 MSGPDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 246

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX 120
           DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSR    XXXX
Sbjct: 247 DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRSAAYXXXX 306

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQRN 180
           XXXXXXXXXXXXXXXXXXXXX     HGKAVETHASHGGDP+EKYGVAFGASGG PLQRN
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXVSKIDHGKAVETHASHGGDPNEKYGVAFGASGGSPLQRN 366

Query: 181 MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRPE 240
           MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTE SSTYTLFRPE
Sbjct: 367 MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTEISSTYTLFRPE 426

Query: 241 E 242
           E
Sbjct: 427 E 427

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BLAST of Carg26081 vs. NCBI nr
Match: XP_022983776.1 (AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita maxima])

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 199/242 (82.23%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           +PG + +NSI YGAGDDQAT  EF+  FCIE+KIDLTS+IKWWGPNK RT+S GSK SEE
Sbjct: 193 VPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEE 252

Query: 61  DKHSS-VGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXX 120
           DKHSS  GEV SELKALGQT  PTEPYEMPCLGTLH VKK  S+VSALSILSR       
Sbjct: 253 DKHSSCAGEVGSELKALGQTARPTEPYEMPCLGTLHDVKKATSRVSALSILSRSAAYKSL 312

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
             XXXXXXXXXXXXXXXXXXXXXXX  HGK +ETH SHGGDPSE+YGVAFG SGGLPLQR
Sbjct: 313 QEXXXXXXXXXXXXXXXXXXXXXXXIDHGKVIETHTSHGGDPSERYGVAFGTSGGLPLQR 372

Query: 181 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRP 240
           NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLF+P
Sbjct: 373 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFQP 432

Query: 241 EE 242
           EE
Sbjct: 433 EE 434

[Close]

BLAST of Carg26081 vs. NCBI nr
Match: XP_022934375.1 (AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 7.2e-91
Identity = 201/242 (83.06%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           +PG + +NSI YGAGDDQAT  EF+  FCIE+KIDLTS+IKWWGPNK RT+S GSK SEE
Sbjct: 193 VPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEE 252

Query: 61  DKHSS-VGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXX 120
           DKHSS  GEV SELKALGQTT PTEPYEMPCLGTLH VKK  S+VSALSILSR       
Sbjct: 253 DKHSSCAGEVGSELKALGQTTRPTEPYEMPCLGTLHDVKKTTSRVSALSILSRSAAYKSL 312

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
           XXXXXXXXXXXXXXXXXXXXXXXXX  HGK VETH SHGGDPSE+YGVAFG SGGLPLQR
Sbjct: 313 XXXXXXXXXXXXXXXXXXXXXXXXXIDHGKVVETHTSHGGDPSERYGVAFGTSGGLPLQR 372

Query: 181 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRP 240
           NMFPLT FLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSR AEVTKTETSSTYTLF+P
Sbjct: 373 NMFPLTSFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRAAEVTKTETSSTYTLFQP 432

Query: 241 EE 242
           EE
Sbjct: 433 EE 434

[Close]

BLAST of Carg26081 vs. NCBI nr
Match: XP_023528603.1 (AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 7.2e-91
Identity = 201/242 (83.06%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           +PG + +NSI YGAGDDQAT  EF+  FCIE+KIDLTS+IKWWGPNK RT+S GSK SEE
Sbjct: 194 VPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEE 253

Query: 61  DKHSS-VGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXX 120
           DKHSS  GEV SELKALGQTT PTEPYEMPCLGTLH VKK  S+VSALSILSR       
Sbjct: 254 DKHSSCAGEVGSELKALGQTTRPTEPYEMPCLGTLHDVKKTTSRVSALSILSRSAAYKSL 313

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
           XXXXXXXXXXXXXXXXXXXXXXXXX  HGK VETH SHGGDPSE+YGVAFG SGGLPLQR
Sbjct: 314 XXXXXXXXXXXXXXXXXXXXXXXXXIDHGKVVETHTSHGGDPSERYGVAFGTSGGLPLQR 373

Query: 181 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRP 240
           NMFPLT FLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSR AEVTKTETSSTYTLF+P
Sbjct: 374 NMFPLTSFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRAAEVTKTETSSTYTLFQP 433

Query: 241 EE 242
           EE
Sbjct: 434 EE 435

[Close]

BLAST of Carg26081 vs. TAIR10
Match: AT2G41710.3 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-43
Identity = 105/249 (42.17%), Postives = 140/249 (56.22%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           MPG +  ++I YGAGDD+ T  +F+ +FC+ERKIDLT YIKWWG NKNR     SK SE+
Sbjct: 222 MPGPEYFSNIHYGAGDDRGTEGDFLGSFCLERKIDLTGYIKWWGANKNRQPESSSKASED 281

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKV------SALSILSR-- 120
              ++V +  +ELK L  T+  TEPY+ P LG L G ++   ++      SALSILS+  
Sbjct: 282 ---ANVEDAGTELKTLEHTSHATEPYKAPNLGVLCGTQRKEKEISSPSSSSALSILSQSP 341

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGAS 180
                                             +GKA+E        P   +GVA G +
Sbjct: 342 AFKSLEEKVLKIQESCNNENDENANRNIINMEKNNGKAIE-------KPVVSHGVALGGA 401

Query: 181 GGLPLQRNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSS 240
             L LQ++M+PLT  LTAPLL++YNT+DPL DPI WT     LP+G S T+EVTKTETS 
Sbjct: 402 AALSLQKSMYPLTSLLTAPLLTNYNTLDPLADPILWTPF---LPSGSSLTSEVTKTETSC 457

Query: 241 TYTLFRPEE 242
           +   + P+E
Sbjct: 462 STYSYLPQE 457

[Close]

BLAST of Carg26081 vs. Swiss-Prot
Match: sp|Q8GWK2|AP2L4_ARATH (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.2e-42
Identity = 105/249 (42.17%), Postives = 140/249 (56.22%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           MPG +  ++I YGAGDD+ T  +F+ +FC+ERKIDLT YIKWWG NKNR     SK SE+
Sbjct: 192 MPGPEYFSNIHYGAGDDRGTEGDFLGSFCLERKIDLTGYIKWWGANKNRQPESSSKASED 251

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKV------SALSILSR-- 120
              ++V +  +ELK L  T+  TEPY+ P LG L G ++   ++      SALSILS+  
Sbjct: 252 ---ANVEDAGTELKTLEHTSHATEPYKAPNLGVLCGTQRKEKEISSPSSSSALSILSQSP 311

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGAS 180
                                             +GKA+E        P   +GVA G +
Sbjct: 312 AFKSLEEKVLKIQESCNNENDENANRNIINMEKNNGKAIE-------KPVVSHGVALGGA 371

Query: 181 GGLPLQRNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSS 240
             L LQ++M+PLT  LTAPLL++YNT+DPL DPI WT     LP+G S T+EVTKTETS 
Sbjct: 372 AALSLQKSMYPLTSLLTAPLLTNYNTLDPLADPILWTPF---LPSGSSLTSEVTKTETSC 427

Query: 241 TYTLFRPEE 242
           +   + P+E
Sbjct: 432 STYSYLPQE 427

[Close]

BLAST of Carg26081 vs. TrEMBL
Match: tr|A0A1S3B793|A0A1S3B793_CUCME (AP2-like ethylene-responsive transcription factor At2g41710 OS=Cucumis melo OX=3656 GN=LOC103486931 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.0e-90
Identity = 204/242 (84.30%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           MPG D V+SI YGAGDDQAT SEF+HNFCIERKIDLTS+IKWWGPNK RT+S GSK SEE
Sbjct: 191 MPGPDYVSSINYGAGDDQATESEFVHNFCIERKIDLTSHIKWWGPNKTRTASAGSKSSEE 250

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX 120
           DK+S  GEV SELKALGQTT PTEPYEMPCLGT  GVKK ASK+SALSILSR       X
Sbjct: 251 DKNSCAGEVGSELKALGQTTRPTEPYEMPCLGT-SGVKKPASKISALSILSRSAAYKSLX 310

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVET-HASHGGDPSEKYGVAFGASGGLPLQR 180
           XXXXXXXXXXXXXXXXXXXXXXXX  HGK VET   SHGGDPSE+YGV FG SGGLPLQR
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXIDHGKVVETPTTSHGGDPSERYGVTFGTSGGLPLQR 370

Query: 181 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRP 240
           NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSL SVLPTGLSRTAEVTKTETSSTYTLFR 
Sbjct: 371 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLASVLPTGLSRTAEVTKTETSSTYTLFRA 430

Query: 241 EE 242
           EE
Sbjct: 431 EE 431

[Close]

BLAST of Carg26081 vs. TrEMBL
Match: tr|A0A0A0LCL8|A0A0A0LCL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822440 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 9.9e-89
Identity = 211/243 (86.83%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           MPG D V+SI YGAGDDQAT SEF+HNFCIERKIDLTS+IKWWGPNK+RT+S GSK SEE
Sbjct: 191 MPGPDYVSSINYGAGDDQATESEFVHNFCIERKIDLTSHIKWWGPNKSRTASAGSKSSEE 250

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKKVASKVSALSILSRXXXXXXXX 120
           DK+S VGEV SELKALGQTT PTEPYEMPCLG   GVKK ASKVSALSIL  XXXXXXXX
Sbjct: 251 DKNSCVGEVGSELKALGQTTRPTEPYEMPCLGA-SGVKKAASKVSALSILXXXXXXXXXX 310

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVET-HASH-GGDPSEKYGVAFGASGGLPLQ 180
           XXXXXXXXXXXXXXXXXXXXXXXX  HGK VET   SH GGDPSE+YGV FG SGGLPLQ
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXIDHGKVVETPTTSHGGGDPSERYGVTFGTSGGLPLQ 370

Query: 181 RNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFR 240
           RNMFPLTPFLTAPLLSSYNTV+PLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFR
Sbjct: 371 RNMFPLTPFLTAPLLSSYNTVEPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFR 430

Query: 241 PEE 242
           PEE
Sbjct: 431 PEE 432

[Close]

BLAST of Carg26081 vs. TrEMBL
Match: tr|A0A1S2XTQ7|A0A1S2XTQ7_CICAR (AP2-like ethylene-responsive transcription factor At2g41710 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101502947 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 132/242 (54.55%), Postives = 159/242 (65.70%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           M G D  +SI YG GDD A  SE++  FCIERKIDLT++IKWWG NKNR S  G++LSEE
Sbjct: 177 MAGSDYFSSIHYGTGDDSAAESEYVSGFCIERKIDLTNHIKWWGSNKNRQSDAGTRLSEE 236

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLHGVKK-VASKVSALSILSRXXXXXXX 120
            KH   G++ SELK L Q   PTEPY+MP LG LH  KK  +S +SALSILS        
Sbjct: 237 KKHGFAGDIYSELKTLEQKVQPTEPYKMPELGRLHNDKKHKSSSMSALSILSHSAAYKSL 296

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
                                      HGKAVE  ++H G  +++  +A G SG L LQR
Sbjct: 297 QEKVTKKPENSAGNDENENKNTVNELDHGKAVEKSSNHEGG-NDRLDIAMGMSGALSLQR 356

Query: 181 NMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLFRP 240
           N++PLTPFL+APLL++YNTVDPL DP+ WTSLV +LP GLSRTAEVTKTET STYT+F+P
Sbjct: 357 NVYPLTPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRTAEVTKTETDSTYTMFQP 416

Query: 241 EE 242
           EE
Sbjct: 417 EE 417

[Close]

BLAST of Carg26081 vs. TrEMBL
Match: tr|A0A2P5A4Q2|A0A2P5A4Q2_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF12 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 134/244 (54.92%), Postives = 158/244 (64.75%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           M G +  NSI YG GDD AT SEF+ + C ERKIDLT+YIKWWGP+KNR      K SEE
Sbjct: 191 MAGSEYFNSINYGTGDDPATESEFVGSICFERKIDLTNYIKWWGPSKNRQGEASVKSSEE 250

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLH-GVKKVASKVSALSILSRXXXXXXX 120
            KH+  G++  ELK +     PTEPY+MP LG  H G++  +SKVSALSILSR       
Sbjct: 251 TKHACAGDIGGELKTIEWAVPPTEPYQMPRLGMSHEGIQHKSSKVSALSILSRSAAYKSL 310

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
                                      +GKAVE   SH G  SE+YGVA G SGGL LQR
Sbjct: 311 QEKASKKQESNAENDANKSKNAINKMDYGKAVEKPTSHDGG-SERYGVALGMSGGLSLQR 370

Query: 181 N--MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLF 240
           N  MFPLTP L+APLL++YNT+DPL DPI WTSL  VLP+G+SRTAEVTKTETSST+TL+
Sbjct: 371 NISMFPLTPLLSAPLLTNYNTIDPLVDPIVWTSLAPVLPSGISRTAEVTKTETSSTFTLY 430

Query: 241 RPEE 242
           +P E
Sbjct: 431 QPGE 433

[Close]

BLAST of Carg26081 vs. TrEMBL
Match: tr|A0A2P5EN46|A0A2P5EN46_9ROSA (AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF12 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60
Identity = 135/244 (55.33%), Postives = 153/244 (62.70%), Query Frame = 0


Query: 1   MPGLDCVNSIIYGAGDDQATVSEFIHNFCIERKIDLTSYIKWWGPNKNRTSSVGSKLSEE 60
           M G +  NSI YG GDD AT SEF+ + C ERKIDLT+YIKWWGPNKNR      K SEE
Sbjct: 191 MAGSEYFNSINYGTGDDPATESEFVGSICFERKIDLTNYIKWWGPNKNRQGEASVKSSEE 250

Query: 61  DKHSSVGEVDSELKALGQTTCPTEPYEMPCLGTLH-GVKKVASKVSALSILSRXXXXXXX 120
            KH+  G++  ELK L     PTEPY+MP LG  H       SKVSALSILSR       
Sbjct: 251 TKHACAGDIGGELKTLEWAVQPTEPYQMPHLGMSHEXXXXXXSKVSALSILSRSAAYKSL 310

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXHGKAVETHASHGGDPSEKYGVAFGASGGLPLQR 180
                                      +GKAVE   SH G  SE+YGVA G S GL LQR
Sbjct: 311 QEKALKKQESNAENDENKSKNAINKMDYGKAVEKPTSHDGG-SERYGVALGMSSGLSLQR 370

Query: 181 N--MFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAEVTKTETSSTYTLF 240
           N  MFPLTP L+APLL++YNT+DPL DPI WTSL  VLP+G+SRTAEVTKTETSST+TL+
Sbjct: 371 NISMFPLTPLLSAPLLTNYNTIDPLVDPIVWTSLAPVLPSGISRTAEVTKTETSSTFTLY 430

Query: 241 RPEE 242
           RP E
Sbjct: 431 RPGE 433

The following BLAST results are available for this feature:

BLAST of Carg26081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540970.1	6.2e-111	100.00	AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita pepo subs...	[more]
XP_022973333.1	1.9e-107	94.19	AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita maxima]	[more]
XP_022983776.1	1.1e-91	82.23	AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita maxima]	[more]
XP_022934375.1	7.2e-91	83.06	AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita moschata]	[more]
XP_023528603.1	7.2e-91	83.06	AP2-like ethylene-responsive transcription factor At2g41710 [Cucurbita pepo subs...	[more]

BLAST of Carg26081 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41710.3	1.8e-43	42.17	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg26081 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWK2\|AP2L4_ARATH	3.2e-42	42.17	AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thali...	[more]

BLAST of Carg26081 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B793\|A0A1S3B793_CUCME	4.0e-90	84.30	AP2-like ethylene-responsive transcription factor At2g41710 OS=Cucumis melo OX=3...	[more]
tr\|A0A0A0LCL8\|A0A0A0LCL8_CUCSA	9.9e-89	86.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822440 PE=4 SV=1	[more]
tr\|A0A1S2XTQ7\|A0A1S2XTQ7_CICAR	3.5e-62	54.55	AP2-like ethylene-responsive transcription factor At2g41710 isoform X1 OS=Cicer ...	[more]
tr\|A0A2P5A4Q2\|A0A2P5A4Q2_PARAD	1.3e-61	54.92	AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF12 PE=4 S...	[more]
tr\|A0A2P5EN46\|A0A2P5EN46_9ROSA	1.5e-60	55.33	AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF12 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26081-RA	Carg26081-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..68
None	No IPR available	PANTHER	PTHR32467:SF32	SUBFAMILY NOT NAMED	coord: 15..241
None	No IPR available	PANTHER	PTHR32467	FAMILY NOT NAMED	coord: 15..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26081	Cla002922	Watermelon (97103) v1	carwmB0309
Carg26081	Csa3G822440	Cucumber (Chinese Long) v2	carcuB0345
Carg26081	ClCG10G015750	Watermelon (Charleston Gray)	carwcgB0311
Carg26081	CSPI03G38270	Wild cucumber (PI 183967)	carcpiB0351
Carg26081	Cucsa.338170	Cucumber (Gy14) v1	carcgyB0375
Carg26081	CmaCh06G008980	Cucurbita maxima (Rimu)	carcmaB0447
Carg26081	CmaCh14G005430	Cucurbita maxima (Rimu)	carcmaB0446
Carg26081	CmoCh06G009240	Cucurbita moschata (Rifu)	carcmoB0438
Carg26081	Lsi03G015590	Bottle gourd (USVL1VR-Ls)	carlsiB292
Carg26081	Cp4.1LG08g06890	Cucurbita pepo (Zucchini)	carcpeB0445
Carg26081	Cp4.1LG03g08520	Cucurbita pepo (Zucchini)	carcpeB0444
Carg26081	CsGy3G035780	Cucumber (Gy14) v2	carcgybB0329
Carg26081	MELO3C009804.2	Melon (DHL92) v3.6.1	carmedB0332
Carg26081	CsaV3_3G040690	Cucumber (Chinese Long) v3	carcucB0350
Carg26081	Cla97C10G198640	Watermelon (97103) v2	carwmbB0327

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26081	Melon (DHL92) v3.5.1	carmeB0323
Carg26081	Wax gourd	carwgoB0403