Carg25796 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25796
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cell number regulator 8
Location	Cucurbita_argyrosperma_scaffold_289 : 121235 .. 124154 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGCGCCGAAAACCTTGAGGAATCCAGCCCCCTTCTCGGCAAGGTCGTTGAAAATGCGGATGAGAAGGATACCCATCGCACCTCCACCGCGGCTAAGCCCGATGCGGTGTCTCCGCCCTCTCCTGTTCGGAAAGATGCCGCGGAGGAGAATAAGGGCACCGGTGGCGATTATGGATGGACCGCCGATGGGCTTCCCGTTGATGGCAGTGTGGTCGGCGAGCCGGTTGGTCGGCCTCAATGGGAAACTGGTCTCTGCGCTTGTCTCGGTCGCCACGATGAGTTCTGCAGCAGCGATCTTGAAGTTTGTAAGCTTCCTTCTTCTGATTGTTATTGGAATTGAGTTTTTTTCTGTGAGTTTAGGTTTTTTGATTCTGTGATTCTTTATCTTTGATTTTTGGGGTTTGTGATTGCATCCGAGAGGAAATTTCTTTATCCTCGACGATTCAATATGATGATTCTCACCAATTTGAATCCGATCCTCCTCTAATTCCAACAATTTTCAATCGGTTCCCCTATTTTTGTAGTTTTATTTCTTGATTAATGATCTTATAGAGATTAATCAGATGATAAGGATGCCTGATTATGAAATCACATGAACCGTAGCTCATCCTCATGATGATCATTGAACTCTTAGGGGATTTACCTTGATCATTGAACTCTTAGATCATCCTAGGTAGTATTGTGTATTTCGTGAAATAGAGTTTCAGAAAAGATCTGGGCTATGCAGAATTGCTTCGTTCTCTAATACCATGCTACCATTTCTATGGGCAGCTATAGGCAGTAAAGGATGTTTAGCTGAATTTTCTGTCCATAACCAGCTGTTTCATACCAGTTGAAATAAACAAGTCTTTAATGTTGTTCATAAAGTTCAAAAGTCTTCCACCTAGTTCTTAAGTTTCCATTAAATACCCAAGTCTAATTCTTGGTGCCATCAATGACTCAAATTGCATTTAAATAAATGCTAGCATTTTCTTGGTTGTAATGTTTGACTGATCTCTTTCTTCATGGGGGAGAAGAAGGGGCTGACCCTATGGCTAAGACTTGTGGTCTCTATATAACACCTAATCAGAGGTTGTGCGTTTGAATCTTCAAGTGAGGTAATAAGGAAATCCTTCATGTCTCCAATGTGGGGTGGATGTGGACTTAAAATAAAAAAAGACATTTACGCGAGGTAATTGATAGTCATCCTATTGGTGAACTAGGCATCCACCCCTCTCATTCGAGTTGGGAATAGAACTGTGGCTTATTCGGCCCTATAAAATGAAAGGGCTATGAACCTTTCGACAACGAGTTTAGTCGAATAGCATAATGAGTCCAAGGGTCCCCGTTGTTAGAATCACATTTAACATTAAGGAAGGTAAGTTCGGGAACATTGTGAGAAGAGGGAAGGCAAAAGAGAGAAACATTCCTCGAAGGCATACAATGTTCTTGCAAGAAATTGCTGCATCCCACCAGAAAGACGGGTGGGAAGAGGCCAAAGCAAAACCATCACTGCAATCAATAACAAAAATGATTGAGATTCCACATCAAATGGAGATGGAAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCAAGCAGACGCGTTTTAAAACATTGAAGGAAAGCTCGGACGGGAAAAATGCAAAGAGGACAATACCTACCTGCTAGCGGTGGATTTGAGCTGTTACAAAAGAAACCTACGACAATAAATTAGTAGCTCATTTTTTTGTATAGGAAGTGATGAAAATGGGAAGAAACTGAAATGAAATTAGAGAGAATAAGGGAAAGCAACTAACAACGACTGTTTGTAGGTCTTCTTGGAAGTGTGGCTCCTTGTATGCTGTATGGAAGCAATGCAGAGAGACTTGGGACTACTCCTGGGACATTTGCAAACCATTGCATGTCATATTCTGGTCTCTACTTAATTGGAACCTCTTTCTTTGGCTGGAACTGCCTTGCTCCATGGTTTACGTTCCCCACCCGTATCCGTATCCGCCGAACGTTCAATCTAGAGGCAAGTTAAACCTACTTCTTTGATATCTGTATCCATTCTTAACATTAAATCTCGGCTTCTGATTTGAAACCACTTTGATTCGATCTGTTGATGAACAGGGTAACTGCGAGGCGTTTCATAGGTCATGTGGCTGTTGCGGACTCTGTGTTGAAGACGAAGTTCAGCGTGAGCACTGTGAATCTGTCTGCGACTTTGCAACTCACGTCTTGTGCCACACGTGTGCACTTTGCCAGGAAGGCCGTGAACTCCGTCGAAGGATACCTCACCCAGGGTTCAATGCTCGTCCCGTGTTAGTCATGATCCCACCTACCGAACAGAACATGGGGCGTGGAGTCTGAGATCCTCATCGAGCTTCGTCTCTCATGTTCGGTGCGTTTCTGCTGAATCTGCATGAAACTATACAAGTGAAAAGAAAATATATAGTGACGAGGTTTTGTATGAATGAGACGGCATGTCATATTTGTGGATAATATACTGTTCTTTTATGCATAGAATATGTATGTTGAAAATATTGGTGAGGATGAATGTTTCGATTTGTATGTTTCTTTTATCATTTGAACTCATAAATTTAAAACTATACTTTATGGTCAAATGTTTCGTTCTTTTTTAGTAATGGTGGCTTTATCAGAGGTGAAGATGAAGGGAGATTACTTTGGTGAAGATAGAAGAAGATATTAACTATTGAGGTCCGAAATATTGTTTTTTCTTAAACCGAACTAGTTTATTAAGAACTGAGTTAAAAGAAAATTCTCGACAATACATAATGAAAAGATAGGTAATTGAAACCTTGTTTTATGATTTTCAGGGTTTTGAGCCTCTTATTATTCGTTGTGAGCATATAGAACATAGAGTATTTAATTTCATCCTCAAAATCTATTCTCCATGTGTGTAAATATATATATATATGTATGTATA

mRNA sequence

ATGGCCAGCGCCGAAAACCTTGAGGAATCCAGCCCCCTTCTCGGCAAGGTCGTTGAAAATGCGGATGAGAAGGATACCCATCGCACCTCCACCGCGGCTAAGCCCGATGCGGTGTCTCCGCCCTCTCCTGTTCGGAAAGATGCCGCGGAGGAGAATAAGGGCACCGGTGGCGATTATGGATGGACCGCCGATGGGCTTCCCGTTGATGGCAGTGTGGTCGGCGAGCCGGTTGGTCGGCCTCAATGGGAAACTGGTCTCTGCGCTTGTCTCGGTCGCCACGATGAGTTCTGCAGCAGCGATCTTGAAGTTTGTCTTCTTGGAAGTGTGGCTCCTTGTATGCTGTATGGAAGCAATGCAGAGAGACTTGGGACTACTCCTGGGACATTTGCAAACCATTGCATGTCATATTCTGGTCTCTACTTAATTGGAACCTCTTTCTTTGGCTGGAACTGCCTTGCTCCATGGTTTACGTTCCCCACCCGTATCCGTATCCGCCGAACGTTCAATCTAGAGGCAAGTTAAACCTACTTCTTTGATATCTGTATCCATTCTTAACATTAAATCTCGGCTTCTGATTTGAAACCACTTTGATTCGATCTGTTGATGAACAGGGTAACTGCGAGGCGTTTCATAGGTCATGTGGCTGTTGCGGACTCTGTGTTGAAGACGAAGTTCAGCGTGAGCACTGTGAATCTGTCTGCGACTTTGCAACTCACGTCTTGTGCCACACGTGTGCACTTTGCCAGGAAGGCCGTGAACTCCGTCGAAGGATACCTCACCCAGGGTTCAATGCTCGTCCCGTGTTAGTCATGATCCCACCTACCGAACAGAACATGGGGCGTGGAGTCTGAGATCCTCATCGAGCTTCGTCTCTCATGTTCGGTGCGTTTCTGCTGAATCTGCATGAAACTATACAAGTGAAAAGAAAATATATAGTGACGAGGTTTTGTATGAATGAGACGGCATGTCATATTTGTGGATAATATACTGTTCTTTTATGCATAGAATATGTATGTTGAAAATATTGGTGAGGATGAATGTTTCGATTTGTATGTTTCTTTTATCATTTGAACTCATAAATTTAAAACTATACTTTATGGTCAAATGTTTCGTTCTTTTTTAGTAATGGTGGCTTTATCAGAGGTGAAGATGAAGGGAGATTACTTTGGTGAAGATAGAAGAAGATATTAACTATTGAGGTCCGAAATATTGTTTTTTCTTAAACCGAACTAGTTTATTAAGAACTGAGTTAAAAGAAAATTCTCGACAATACATAATGAAAAGATAGGTAATTGAAACCTTGTTTTATGATTTTCAGGGTTTTGAGCCTCTTATTATTCGTTGTGAGCATATAGAACATAGAGTATTTAATTTCATCCTCAAAATCTATTCTCCATGTGTGTAAATATATATATATATGTATGTATA

Coding sequence (CDS)

ATGGCCAGCGCCGAAAACCTTGAGGAATCCAGCCCCCTTCTCGGCAAGGTCGTTGAAAATGCGGATGAGAAGGATACCCATCGCACCTCCACCGCGGCTAAGCCCGATGCGGTGTCTCCGCCCTCTCCTGTTCGGAAAGATGCCGCGGAGGAGAATAAGGGCACCGGTGGCGATTATGGATGGACCGCCGATGGGCTTCCCGTTGATGGCAGTGTGGTCGGCGAGCCGGTTGGTCGGCCTCAATGGGAAACTGGTCTCTGCGCTTGTCTCGGTCGCCACGATGAGTTCTGCAGCAGCGATCTTGAAGTTTGTCTTCTTGGAAGTGTGGCTCCTTGTATGCTGTATGGAAGCAATGCAGAGAGACTTGGGACTACTCCTGGGACATTTGCAAACCATTGCATGTCATATTCTGGTCTCTACTTAATTGGAACCTCTTTCTTTGGCTGGAACTGCCTTGCTCCATGGTTTACGTTCCCCACCCGTATCCGTATCCGCCGAACGTTCAATCTAGAGGCAAGTTAA

Protein sequence

MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYGWTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS

Homology

[Close]

BLAST of Carg25796 vs. NCBI nr
Match: XP_022963293.1 (cell number regulator 8-like [Cucurbita moschata])

HSP 1 Score: 359.0 bits (920), Expect = 9.1e-96
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAV PPSPVRKDAAEENKGTGGDYG
Sbjct: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVPPPSPVRKDAAEENKGTGGDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE
Sbjct: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120

Query: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLE +
Sbjct: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEGN 173

[Close]

BLAST of Carg25796 vs. NCBI nr
Match: XP_023518870.1 (cell number regulator 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-95
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAV PPSPVRKDAAEENKGTGGDYG
Sbjct: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVPPPSPVRKDAAEENKGTGGDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPC+LYGSNAE
Sbjct: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCLLYGSNAE 120

Query: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLE +
Sbjct: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEGN 173

[Close]

BLAST of Carg25796 vs. NCBI nr
Match: XP_022972579.1 (cell number regulator 8-like [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 4.2e-93
Identity = 164/173 (94.80%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MA+AENLEESSPLLGKVVEN DEKDTHRTSTAAKP+AV PPSPVRKDA+EENKG+GGDYG
Sbjct: 1   MANAENLEESSPLLGKVVENEDEKDTHRTSTAAKPEAVPPPSPVRKDASEENKGSGGDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE
Sbjct: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120

Query: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFP+RIRIRRTFNLE +
Sbjct: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPSRIRIRRTFNLEGN 173

[Close]

BLAST of Carg25796 vs. NCBI nr
Match: XP_022979164.1 (cell number regulator 8-like [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 8.2e-81
Identity = 146/173 (84.39%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MA+ ENLEESSPLLGKVVE ADEKDTHR STA + DAV PP  VRK A EEN G G DYG
Sbjct: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTADRADAVPPPPAVRKYAEEENGGDGCDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLP+ GSV+GEPVGR QWETGLCACLGRHDEFCSSD+EVCL+GSVAPCMLYGSNAE
Sbjct: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDIEVCLIGSVAPCMLYGSNAE 120

Query: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLG+TPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTR  IRR FNLE +
Sbjct: 121 RLGSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRTAIRRMFNLEGN 173

[Close]

BLAST of Carg25796 vs. NCBI nr
Match: XP_023543087.1 (cell number regulator 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 2.4e-80
Identity = 145/173 (83.82%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MA++ENLEESSPLLGKVVE ADEKDTHR ST  + DAV PP PVRK   EEN G G DYG
Sbjct: 1   MANSENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPPPLPVRKYTEEENGGDGCDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLP+ GSV+GEPVGR QWETGLCACLGRHDEFCSSDLEVCL+GSVAPCMLYGSNAE
Sbjct: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDLEVCLVGSVAPCMLYGSNAE 120

Query: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLG+TPG FANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTR  IRR FNLE +
Sbjct: 121 RLGSTPGAFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRTAIRRMFNLEGN 173

[Close]

BLAST of Carg25796 vs. TAIR10
Match: AT2G37110.1 (PLAC8 family protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-52
Identity = 106/170 (62.35%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 5   ENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYGWTAD 64
           +  EESSPLL KV EN  +  + R + AA    V PP      AAEE       YGWTAD
Sbjct: 13  DEYEESSPLL-KVNENDGKICSKRDAKAA--PLVPPP------AAEE-------YGWTAD 72

Query: 65  GLPVD-GSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERLG 124
           GLPV  GSV+GEP+ R QW +GL  CLGR+DEFCSSDLEVCLLGSVAPC+LYG+NAERLG
Sbjct: 73  GLPVSHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTNAERLG 132

Query: 125 TTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           + PGTF+NHC++Y GLY +G S FGWNCLAPWF++ +R  IRR FNLE S
Sbjct: 133 SAPGTFSNHCLTYLGLYFVGNSLFGWNCLAPWFSYSSRSAIRRKFNLEGS 166

[Close]

BLAST of Carg25796 vs. TAIR10
Match: AT2G40935.1 (PLAC8 family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 81  QWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERLGTTPGTFANHCMSY 137
           QW +G+CAC          D++ C +G   PC ++G NAE LG+  GTFA  C+++
Sbjct: 46  QWSSGICACF--------DDMQSCCVGLFCPCYIFGKNAELLGS--GTFAGPCLTH 91

[Close]

BLAST of Carg25796 vs. Swiss-Prot
Match: sp|B4FUS3|CNR8_MAIZE (Cell number regulator 8 OS=Zea mays OX=4577 GN=CNR8 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-40
Identity = 90/180 (50.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 2   ASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYGW 61
           A A N EESSPL+   V              A P    PP     +AA           +
Sbjct: 3   AGANNHEESSPLIPAAV--------------AAPAYEKPPQAPAPEAA----------NY 62

Query: 62  TADGLPVDGSVVGEPVG--------RPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCM 121
            ADG+PV   V+GEPV         R  W +G+ +CLGR+DEFCSSD+EVCLLG+VAPC+
Sbjct: 63  YADGVPV---VMGEPVSAHAFGGVPRESWNSGILSCLGRNDEFCSSDVEVCLLGTVAPCV 122

Query: 122 LYGSNAERLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           LYGSN ERL    GTFAN C+ Y+GLYL+G S FGWNCLAPWF+ PTR  IR+ +NLE S
Sbjct: 123 LYGSNVERLAAGQGTFANSCLPYTGLYLLGNSLFGWNCLAPWFSHPTRTAIRQRYNLEGS 155

[Close]

BLAST of Carg25796 vs. Swiss-Prot
Match: sp|B4FF80|CNR5_MAIZE (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0


Query: 81  QWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERL--GTTPGTFANHCMSYSG 140
           QW +G+CAC          D + C +G++ PC L+G NA+ L  GT  G+   HCM +  
Sbjct: 44  QWSSGICACF--------DDPQSCCIGAICPCFLFGKNAQFLGSGTLAGSCTTHCMLWGL 103

Query: 141 LYLIGTSFFGWNCLA 154
           L  +   F G   LA
Sbjct: 104 LTSLCCVFTGGLVLA 110

[Close]

BLAST of Carg25796 vs. Swiss-Prot
Match: sp|Q8S8T8|PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05
Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 81  QWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERLGTTPGTFANHCMSY 137
           QW +G+CAC          D++ C +G   PC ++G NAE LG+  GTFA  C+++
Sbjct: 46  QWSSGICACF--------DDMQSCCVGLFCPCYIFGKNAELLGS--GTFAGPCLTH 91

[Close]

BLAST of Carg25796 vs. TrEMBL
Match: tr|A0A1S3BLN1|A0A1S3BLN1_CUCME (cell number regulator 8 OS=Cucumis melo OX=3656 GN=LOC103491200 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.4e-68
Identity = 130/174 (74.71%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYG 60
           MA+ +NLEESSPLLGKVVENADEKDT R+ST                     +  G DYG
Sbjct: 1   MANGDNLEESSPLLGKVVENADEKDTLRSSTXXXXXXXXXXXXXXXXXXXXXRDGGSDYG 60

Query: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120
           WTADGLPV GSVVGEPVGR QWET LCAC+GRHDEFCSSDLEVCLLGSVAPC+LYG+NAE
Sbjct: 61  WTADGLPVHGSVVGEPVGRAQWETDLCACIGRHDEFCSSDLEVCLLGSVAPCILYGTNAE 120

Query: 121 RLG-TTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           RLG +TPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFT+PTR  IRR FNLE +
Sbjct: 121 RLGSSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTYPTRTAIRRMFNLEGN 174

[Close]

BLAST of Carg25796 vs. TrEMBL
Match: tr|A0A0A0KH41|A0A0A0KH41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444990 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.2e-65
Identity = 126/177 (71.19%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTA---AKPDAVSPPSPVRKDAAEENKGTGG 60
           MA+ ENLEESSPLLGKVV NAD KD+  TSTA                K   E+N+    
Sbjct: 1   MANGENLEESSPLLGKVVANADHKDSLPTSTAPXXXXXXXXXXXXXXXKHMDEDNRDGRS 60

Query: 61  DYGWTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGS 120
           DY WTADGLPV GSV+GEP+GR QWET LCAC+GRHDEFCSSDLEVCLLGSVAPC+LYG+
Sbjct: 61  DYAWTADGLPVHGSVLGEPIGRAQWETDLCACIGRHDEFCSSDLEVCLLGSVAPCILYGT 120

Query: 121 NAER-LGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           NAER + +TPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFT+PTR  IRR FNLE +
Sbjct: 121 NAERVVSSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTYPTRTAIRRMFNLEGN 177

[Close]

BLAST of Carg25796 vs. TrEMBL
Match: tr|B9SGP9|B9SGP9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0819280 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 109/172 (63.37%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 3   SAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYGWT 62
           S  + EES+PLL K   N  E++   T  AA+       SPV K A  + +    +YGWT
Sbjct: 11  STSDREESNPLLNK---NLQEQEKKTTKAAAE-------SPVEKPAPPQLRRP--EYGWT 70

Query: 63  ADGLPVD-GSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAER 122
           A+GLP+  GSVVGEP+GR QW++ +CACLGR+DEFCSSDLEVCLLGSVAPC+LYGSNAER
Sbjct: 71  ANGLPLSHGSVVGEPMGRAQWDSSICACLGRNDEFCSSDLEVCLLGSVAPCVLYGSNAER 130

Query: 123 LGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           LG+TPGTFANHC+ Y+GLYLIG SFFGWNC+APWF++P+R  IRR FNLE S
Sbjct: 131 LGSTPGTFANHCLPYTGLYLIGNSFFGWNCIAPWFSYPSRTAIRRRFNLEGS 170

[Close]

BLAST of Carg25796 vs. TrEMBL
Match: tr|A0A067K1Z9|A0A067K1Z9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16482 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-54
Identity = 110/167 (65.87%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 8   EESSPLLGKVVENADEKDTHRTSTAAKPDAVSPPSPVRKDAAEENKGTGGDYGWTADGLP 67
           EESSPLL K  +  D+K T  T T          SP  K AA E      +YGWTA+GLP
Sbjct: 16  EESSPLLNKSHQENDKKPTKLTDTKV------AASPAEKSAAPELGQP--EYGWTANGLP 75

Query: 68  V-DGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAERLGTTP 127
           +  GSVVGEP+GR QW++ L ACLGR+DEFCSSDLEVCLLGSVAPC+LYGSNAERLG++P
Sbjct: 76  LGHGSVVGEPMGRAQWDSSLFACLGRNDEFCSSDLEVCLLGSVAPCVLYGSNAERLGSSP 135

Query: 128 GTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           GTFANHC+ Y+GLYLIG SFFGWNCLAPWF++P+R+ IRR FNLE S
Sbjct: 136 GTFANHCLPYTGLYLIGNSFFGWNCLAPWFSYPSRMAIRRRFNLEGS 174

[Close]

BLAST of Carg25796 vs. TrEMBL
Match: tr|A0A1U8NH71|A0A1U8NH71_GOSHI (cell number regulator 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107948322 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-54
Identity = 113/179 (63.13%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 1   MASAENLEESSPLLGK--VVENADEKD---THRTSTAAKPDAVSPPSPVRKDAAEENKGT 60
           MA+  NLEESSPLL K   VE  ++K+    + T  AA P+A                 T
Sbjct: 1   MANNNNLEESSPLLSKHVGVEEDEKKNLNVNNSTDVAASPEA----------------RT 60

Query: 61  GGDYGWTADGLP-VDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCML 120
           G  +GWTADGLP V GSVVGEP+GR QW++ L ACLGR+DEFCSSD+EVCLLGSVAPC+L
Sbjct: 61  GAGFGWTADGLPLVHGSVVGEPMGRSQWDSSLLACLGRNDEFCSSDVEVCLLGSVAPCVL 120

Query: 121 YGSNAERLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEAS 174
           YGSN ERLG+ PGTFANHC+ YSGLYLIG SFFGWNCLAPWF++PTR  IRR FNLE +
Sbjct: 121 YGSNVERLGSAPGTFANHCLPYSGLYLIGNSFFGWNCLAPWFSYPTRTAIRRKFNLEGT 163

The following BLAST results are available for this feature:

BLAST of Carg25796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963293.1	9.1e-96	98.27	cell number regulator 8-like [Cucurbita moschata]	[more]
XP_023518870.1	2.0e-95	97.69	cell number regulator 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972579.1	4.2e-93	94.80	cell number regulator 8-like [Cucurbita maxima]	[more]
XP_022979164.1	8.2e-81	84.39	cell number regulator 8-like [Cucurbita maxima]	[more]
XP_023543087.1	2.4e-80	83.82	cell number regulator 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25796 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37110.1	1.5e-52	62.35	PLAC8 family protein	[more]
AT2G40935.1	1.3e-06	39.29	PLAC8 family protein	[more]

BLAST of Carg25796 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B4FUS3\|CNR8_MAIZE	3.7e-40	50.00	Cell number regulator 8 OS=Zea mays OX=4577 GN=CNR8 PE=2 SV=1	[more]
sp\|B4FF80\|CNR5_MAIZE	1.7e-05	36.00	Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1	[more]
sp\|Q8S8T8\|PCR10_ARATH	2.3e-05	39.29	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=...	[more]

BLAST of Carg25796 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLN1\|A0A1S3BLN1_CUCME	2.4e-68	74.71	cell number regulator 8 OS=Cucumis melo OX=3656 GN=LOC103491200 PE=4 SV=1	[more]
tr\|A0A0A0KH41\|A0A0A0KH41_CUCSA	7.2e-65	71.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444990 PE=4 SV=1	[more]
tr\|B9SGP9\|B9SGP9_RICCO	1.1e-54	63.37	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0819280 PE=4 SV=1	[more]
tr\|A0A067K1Z9\|A0A067K1Z9_JATCU	2.6e-54	65.87	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16482 PE=4 SV=1	[more]
tr\|A0A1U8NH71\|A0A1U8NH71_GOSHI	2.6e-54	63.13	cell number regulator 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107948322 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25796-RA	Carg25796-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 82..172 e-value: 1.1E-13 score: 51.9
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 31..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	PANTHER	PTHR15907:SF91	SUBFAMILY NOT NAMED	coord: 31..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25796	Cla018274	Watermelon (97103) v1	carwmB0415
Carg25796	Csa6G444990	Cucumber (Chinese Long) v2	carcuB0450
Carg25796	MELO3C014254	Melon (DHL92) v3.5.1	carmeB0426
Carg25796	ClCG04G008880	Watermelon (Charleston Gray)	carwcgB0411
Carg25796	CSPI06G24220	Wild cucumber (PI 183967)	carcpiB0455
Carg25796	Cucsa.124230	Cucumber (Gy14) v1	carcgyB0485
Carg25796	CmaCh07G009360	Cucurbita maxima (Rimu)	carcmaB0582
Carg25796	CmaCh03G012500	Cucurbita maxima (Rimu)	carcmaB0581
Carg25796	CmoCh07G009800	Cucurbita moschata (Rifu)	carcmoB0566
Carg25796	CmoCh03G012480	Cucurbita moschata (Rifu)	carcmoB0565
Carg25796	Lsi01G013590	Bottle gourd (USVL1VR-Ls)	carlsiB380
Carg25796	Cp4.1LG10g04830	Cucurbita pepo (Zucchini)	carcpeB0587
Carg25796	Cp4.1LG19g04300	Cucurbita pepo (Zucchini)	carcpeB0588
Carg25796	CsGy6G023620	Cucumber (Gy14) v2	carcgybB0426
Carg25796	MELO3C014254.2	Melon (DHL92) v3.6.1	carmedB0428
Carg25796	CsaV3_6G039390	Cucumber (Chinese Long) v3	carcucB0451
Carg25796	Cla97C04G075560	Watermelon (97103) v2	carwmbB0442
Carg25796	Bhi03G001299	Wax gourd	carwgoB0504

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25796	Carg15281	Silver-seed gourd	carcarB436

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25796	Silver-seed gourd	carcarB190
Carg25796	Melon (DHL92) v3.5.1	carmeB0425
Carg25796	Melon (DHL92) v3.5.1	carmeB0427
Carg25796	Melon (DHL92) v3.6.1	carmedB0429
Carg25796	Watermelon (97103) v2	carwmbB0441