Carg15281 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15281
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cell number regulator 8
Location	Cucurbita_argyrosperma_scaffold_085 : 149915 .. 151367 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACGGCGAAAACCTCGAGGAATCAAGCCCACTTCTCGGCAAGGTCGTTGAAAAAGCAGATGAGAAGGATACACATCGCATCTCCACGGGGGATAGGGCCGATGCAGTACCTCCGCCGCCTCCTGTCCGGAAATTTGCGGAGGAAGAGAACGGCGGCGATGGCTGTGATTATGGGTGGACTGCCGATGGGCTCCCGATTCATGGTAGTGTGATGGGAGAGCCGGTAGGTCGGGCCCAATGGGAAACTGGTCTCTGCGCTTGTCTTGGTCGCCACGATGAGTTCTGCAGTAGCGATCTAGAAGTTTGTAAGTCGATTCGTTTTCTTCATTTGAATTGAGTTTTTGCTGAAAGGTTAGGCTTTGGGGATACGTGATTCGTTTTCCCTGATTTTTGGGTTTGTAGCTTATTCCTACCAAAATATTCTTCTTCTTACTTTAGATAGGGTGCCTTATCCACCATGATCTTAATATGCTAGCACTTCTTTAGGCAGGAGTATTCTGTTGTTTCTTCAAATAGAGTTTCAGATAAGATCTGGGCTATGCAGAATTCTTGGATCTCTAATACCATTCTTATCACTTTTAATTGGTTTGAATAAACAAGTTCCCTAATCCTTAATCTTCCAATAAATACCCATTCTGATCCTTGGGGTCTCGATGGGGCCTGGATTACAATAAGAAAAGGAATCCTTATTTTCACGGGGAGGAGGGGCTGGAGGAATTCAACACATTTATAGGAGGGTATTGCTATAAACTTCTTTAGGGAGGGATTTCTATTGACTACTAGGGTTTTACTTCTTGCTTCAACTTGAAGAGGTAAAATTAGGGAAGAAAGTGAAATGAAATTAGGAGAAAATAAGGGAAAGCAACTTACAATGAGTGTTTGTAGGTCTTATTGGAAGTGTGGCTCCTTGTATGCTGTATGGAAGCAACGCAGAGAGACTTGGGTCTACTCCTGGGACTTTTGCAAACCATTGCATGTCATATTCTGGTCTCTACTTAATTGGAACCTCTTTCTTTGGTTGGAACTGCCTTGCTCCATGGTTTACATTTCCTACCCGCACAGCTATCCGCCGAATGTTCAATCTGGAGGCAAGTTGAACCTTCTCCTTTACCATTCTTGATTCTCAATATCTGCAAATGAATGCATGACTTGACATTCAATTCAATTGATGGGAAAGTTTATACATTACCTTGTTTCATGACGAGCAGGGTAACTGCGAGGCACTTCATAGGTCATGTGGCTGTTGCGGACTCTGTGTTGAAGACGAAGTTCAGCGTGAGCACTGTGAATCTGTCTGTGACTTTGCAACTCATGTCTTCTGTCACACCTGTGCACTTTGCCAGGAAGGTCGTGAACTTCGTCGGAGGATGCCTCACCCAGGGTTCAATGCTCGTCCTGTGTTAGTCATGATCCCACCTGCAGAACAGTCCATGGGGCGTGGAGTCTGA

mRNA sequence

ATGGCCAACGGCGAAAACCTCGAGGAATCAAGCCCACTTCTCGGCAAGGTCGTTGAAAAAGCAGATGAGAAGGATACACATCGCATCTCCACGGGGGATAGGGCCGATGCAGTACCTCCGCCGCCTCCTGTCCGGAAATTTGCGGAGGAAGAGAACGGCGGCGATGGCTGTGATTATGGGTGGACTGCCGATGGGCTCCCGATTCATGGTAGTGTGATGGGAGAGCCGGTAGGTCGGGCCCAATGGGAAACTGGTCTCTGCGCTTGTCTTGGTCGCCACGATGAGTTCTGCAGTAGCGATCTAGAAGGTAACTGCGAGGCACTTCATAGGTCATGTGGCTGTTGCGGACTCTGTGTTGAAGACGAAGTTCAGCGTGAGCACTGTGAATCTGTCTGTGACTTTGCAACTCATGTCTTCTGTCACACCTGTGCACTTTGCCAGGAAGGTCGTGAACTTCGTCGGAGGATGCCTCACCCAGGGTTCAATGCTCGTCCTGTGTTAGTCATGATCCCACCTGCAGAACAGTCCATGGGGCGTGGAGTCTGA

Coding sequence (CDS)

ATGGCCAACGGCGAAAACCTCGAGGAATCAAGCCCACTTCTCGGCAAGGTCGTTGAAAAAGCAGATGAGAAGGATACACATCGCATCTCCACGGGGGATAGGGCCGATGCAGTACCTCCGCCGCCTCCTGTCCGGAAATTTGCGGAGGAAGAGAACGGCGGCGATGGCTGTGATTATGGGTGGACTGCCGATGGGCTCCCGATTCATGGTAGTGTGATGGGAGAGCCGGTAGGTCGGGCCCAATGGGAAACTGGTCTCTGCGCTTGTCTTGGTCGCCACGATGAGTTCTGCAGTAGCGATCTAGAAGGTAACTGCGAGGCACTTCATAGGTCATGTGGCTGTTGCGGACTCTGTGTTGAAGACGAAGTTCAGCGTGAGCACTGTGAATCTGTCTGTGACTTTGCAACTCATGTCTTCTGTCACACCTGTGCACTTTGCCAGGAAGGTCGTGAACTTCGTCGGAGGATGCCTCACCCAGGGTTCAATGCTCGTCCTGTGTTAGTCATGATCCCACCTGCAGAACAGTCCATGGGGCGTGGAGTCTGA

Protein sequence

MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPPPPPVRKFAEEENGGDGCDYGWTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDLEGNCEALHRSCGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIPPAEQSMGRGV

Homology

[Close]

BLAST of Carg15281 vs. NCBI nr
Match: XP_022926040.1 (cell number regulator 8-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 4.3e-88
Identity = 181/250 (72.40%), Postives = 181/250 (72.40%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG
Sbjct: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD                    
Sbjct: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDLEVCLIGSVAPCMLYGSNAE 120

Query: 121 -------------------------------------------------LEGNCEALHRS 180
                                                            LEGNCEALHRS
Sbjct: 121 RLGSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRTAIRRMFNLEGNCEALHRS 180

Query: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 182
           CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP
Sbjct: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 240

[Close]

BLAST of Carg15281 vs. NCBI nr
Match: XP_022979164.1 (cell number regulator 8-like [Cucurbita maxima])

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 168/250 (67.20%), Postives = 168/250 (67.20%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MANGENLEESSPLLGKVVEKADEKDTHRIST DRADAVP            NGGDGCDYG
Sbjct: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTADRADAVPPPPAVRKYAEEENGGDGCDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD                    
Sbjct: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDIEVCLIGSVAPCMLYGSNAE 120

Query: 121 -------------------------------------------------LEGNCEALHRS 180
                                                            LEGNCEALHRS
Sbjct: 121 RLGSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRTAIRRMFNLEGNCEALHRS 180

Query: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 182
           CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP
Sbjct: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 240

[Close]

BLAST of Carg15281 vs. NCBI nr
Match: XP_023543087.1 (cell number regulator 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 168/250 (67.20%), Postives = 168/250 (67.20%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MAN ENLEESSPLLGKVVEKADEKDTHRISTGDRADAVP            NGGDGCDYG
Sbjct: 1   MANSENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPPPLPVRKYTEEENGGDGCDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD                    
Sbjct: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSDLEVCLVGSVAPCMLYGSNAE 120

Query: 121 -------------------------------------------------LEGNCEALHRS 180
                                                            LEGNCEALHRS
Sbjct: 121 RLGSTPGAFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRTAIRRMFNLEGNCEALHRS 180

Query: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 182
           CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP
Sbjct: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 240

[Close]

BLAST of Carg15281 vs. NCBI nr
Match: XP_022963293.1 (cell number regulator 8-like [Cucurbita moschata])

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 149/250 (59.60%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MA+ ENLEESSPLLGKVVE ADEKDTHR ST  + DAVP            N G G DYG
Sbjct: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVPPPSPVRKDAAEENKGTGGDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLP+ GSV+GEPVGR QWETGLCACLGRHDEFCSSD                    
Sbjct: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCMLYGSNAE 120

Query: 121 -------------------------------------------------LEGNCEALHRS 180
                                                            LEGNCEA HRS
Sbjct: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEGNCEAFHRS 180

Query: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 182
           CGCCGLCVEDEVQREHCESVCDFATHV CHTCALCQEGRELRRR+PHPGFNARPVLVMIP
Sbjct: 181 CGCCGLCVEDEVQREHCESVCDFATHVLCHTCALCQEGRELRRRIPHPGFNARPVLVMIP 240

[Close]

BLAST of Carg15281 vs. NCBI nr
Match: XP_023518870.1 (cell number regulator 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 149/250 (59.60%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MA+ ENLEESSPLLGKVVE ADEKDTHR ST  + DAVP            N G G DYG
Sbjct: 1   MASAENLEESSPLLGKVVENADEKDTHRTSTAAKPDAVPPPSPVRKDAAEENKGTGGDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLP+ GSV+GEPVGR QWETGLCACLGRHDEFCSSD                    
Sbjct: 61  WTADGLPVDGSVVGEPVGRPQWETGLCACLGRHDEFCSSDLEVCLLGSVAPCLLYGSNAE 120

Query: 121 -------------------------------------------------LEGNCEALHRS 180
                                                            LEGNCEA HRS
Sbjct: 121 RLGTTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTFPTRIRIRRTFNLEGNCEAFHRS 180

Query: 181 CGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMIP 182
           CGCCGLCVEDEVQREHCESVCDFATHV CHTCALCQEGRELRRR+PHPGFNARPVLVMIP
Sbjct: 181 CGCCGLCVEDEVQREHCESVCDFATHVLCHTCALCQEGRELRRRIPHPGFNARPVLVMIP 240

[Close]

BLAST of Carg15281 vs. TAIR10
Match: AT2G37110.1 (PLAC8 family protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-45
Identity = 104/246 (42.28%), Postives = 125/246 (50.81%), Query Frame = 0


Query: 4   GENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYGWTA 63
           G+  EESSPLL     K +E D    S  D A A P                  +YGWTA
Sbjct: 12  GDEYEESSPLL-----KVNENDGKICSKRD-AKAAPLVPPPAAE----------EYGWTA 71

Query: 64  DGLPI-HGSVMGEPVGRAQWETGLCACLGRHDEFCSSD---------------------- 123
           DGLP+ HGSV+GEP+ R QW +GL  CLGR+DEFCSSD                      
Sbjct: 72  DGLPVSHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTNAERL 131

Query: 124 -----------------------------------------------LEGNCEALHRSCG 180
                                                          LEG+ EA++RSCG
Sbjct: 132 GSAPGTFSNHCLTYLGLYFVGNSLFGWNCLAPWFSYSSRSAIRRKFNLEGSFEAMNRSCG 191

[Close]

BLAST of Carg15281 vs. TAIR10
Match: AT3G18470.1 (PLAC8 family protein)

HSP 1 Score: 44.7 bits (104), Expect = 7.2e-05
Identity = 37/128 (28.91%), Postives = 47/128 (36.72%), Query Frame = 0


Query: 81  QWETGLCACLGRHDE-----FCSSDLEGNCEAL----HRSCGCCGL------------CV 140
           QW +GL +C+   +      FC     G    +       CG CG+            C+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCL 63

Query: 141 EDEVQREHCES--------VCDFATHVFCHTCALCQEGRELRRR--MPHPGFNARPVLVM 178
                R    S          D  TH FC  CALCQE REL+ R   P  G++      M
Sbjct: 64  FSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTM 123

[Close]

BLAST of Carg15281 vs. TAIR10
Match: AT2G40935.1 (PLAC8 family protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04
Identity = 21/46 (45.65%), Postives = 26/46 (56.52%), Query Frame = 0


Query: 111 SCGCCGLCVEDEVQREHCESVC-DFATHVFCHTCALCQEGRELRRR 156
           SC  CG       +    E+ C DF TH FCH CA+CQE RE+R +
Sbjct: 119 SCYACGYRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQ 164

[Close]

BLAST of Carg15281 vs. Swiss-Prot
Match: sp|B4FUS3|CNR8_MAIZE (Cell number regulator 8 OS=Zea mays OX=4577 GN=CNR8 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 80/197 (40.61%), Postives = 93/197 (47.21%), Query Frame = 0


Query: 63  ADGLPIHGSVMGEPVG--------RAQWETGLCACLGRHDEFCSSD-------------- 122
           ADG+P+   VMGEPV         R  W +G+ +CLGR+DEFCSSD              
Sbjct: 40  ADGVPV---VMGEPVSAHAFGGVPRESWNSGILSCLGRNDEFCSSDVEVCLLGTVAPCVL 99

Query: 123 -------------------------------------------------------LEGNC 182
                                                                  LEG+ 
Sbjct: 100 YGSNVERLAAGQGTFANSCLPYTGLYLLGNSLFGWNCLAPWFSHPTRTAIRQRYNLEGSF 159

[Close]

BLAST of Carg15281 vs. Swiss-Prot
Match: sp|D9HP26|CNR10_MAIZE (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 38/146 (26.03%), Postives = 51/146 (34.93%), Query Frame = 0


Query: 63  ADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSS------DLEGNCEALHR---SCG 122
           A   P+ G  +G P   +QW +GL  C       C +            E + R   SCG
Sbjct: 12  AGAAPVTGFPVGGPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCG 71

Query: 123 CCGLCVEDEVQREHCESV--------------------CDFATHVFCHTCALCQEGRELR 180
             G           C+ +                    CD   H  C  CALCQ+ +EL+
Sbjct: 72  TAGALYAVLAYFTGCQWIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELK 131

[Close]

BLAST of Carg15281 vs. Swiss-Prot
Match: sp|B4FF80|CNR5_MAIZE (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 26/68 (38.24%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 111 SCGCCGLCVEDEVQREHCESVC-DFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVM 170
           +C  CG       +    E+ C D  TH+FCH CA+CQE RE+R R    G  + P   +
Sbjct: 117 ACYACGYRSALRTKYNLPEAPCGDLTTHLFCHLCAICQEYREIRER---TGSGSSPAPNV 176

Query: 171 IPPAEQSM 178
            PP  Q+M
Sbjct: 177 TPPPVQTM 181

[Close]

BLAST of Carg15281 vs. Swiss-Prot
Match: sp|D9HP19|CNR3_MAIZE (Cell number regulator 3 OS=Zea mays OX=4577 GN=CNR3 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-04
Identity = 28/59 (47.46%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 129 ESVC-DFATHVFCHTCALCQEGRELRRRMPHP----GFNARPV---LVMIPPAEQSMGR 180
           E+ C DF  H+ C  CALCQE REL+ R   P     FNA+     + M PPA Q MGR
Sbjct: 109 EAPCADFLVHLCCLHCALCQEYRELKARGYEPVLGWEFNAQRAAAGVAMCPPASQGMGR 167

[Close]

BLAST of Carg15281 vs. TrEMBL
Match: tr|A0A1S3BLN1|A0A1S3BLN1_CUCME (cell number regulator 8 OS=Cucumis melo OX=3656 GN=LOC103491200 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 9.8e-73
Identity = 158/251 (62.95%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDYG 60
           MANG+NLEESSPLLGKVVE ADEKDT R ST        XXXXXXXXXXXX    G DYG
Sbjct: 1   MANGDNLEESSPLLGKVVENADEKDTLRSSTXXXXXXXXXXXXXXXXXXXXXRDGGSDYG 60

Query: 61  WTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD-------------------- 120
           WTADGLP+HGSV+GEPVGRAQWET LCAC+GRHDEFCSSD                    
Sbjct: 61  WTADGLPVHGSVVGEPVGRAQWETDLCACIGRHDEFCSSDLEVCLLGSVAPCILYGTNAE 120

Query: 121 --------------------------------------------------LEGNCEALHR 180
                                                             LEGNCEALHR
Sbjct: 121 RLGSSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTYPTRTAIRRMFNLEGNCEALHR 180

Query: 181 SCGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVLVMI 182
           SCGCCGLCVEDEVQREHCESVCDFATH+FCHTCALCQEGRELRRRMPHPGFNARPVLVMI
Sbjct: 181 SCGCCGLCVEDEVQREHCESVCDFATHIFCHTCALCQEGRELRRRMPHPGFNARPVLVMI 240

[Close]

BLAST of Carg15281 vs. TrEMBL
Match: tr|A0A0A0KH41|A0A0A0KH41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444990 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.9e-68
Identity = 148/254 (58.27%), Postives = 153/254 (60.24%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVEKADEKDTHRISTG---DRADAVPXXXXXXXXXXXXNGGDGC 60
           MANGENLEESSPLLGKVV  AD KD+   ST           XXXXXX      N     
Sbjct: 1   MANGENLEESSPLLGKVVANADHKDSLPTSTAPXXXXXXXXXXXXXXXKHMDEDNRDGRS 60

Query: 61  DYGWTADGLPIHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD----------------- 120
           DY WTADGLP+HGSV+GEP+GRAQWET LCAC+GRHDEFCSSD                 
Sbjct: 61  DYAWTADGLPVHGSVLGEPIGRAQWETDLCACIGRHDEFCSSDLEVCLLGSVAPCILYGT 120

Query: 121 -----------------------------------------------------LEGNCEA 180
                                                                LEGNCEA
Sbjct: 121 NAERVVSSTPGTFANHCMSYSGLYLIGTSFFGWNCLAPWFTYPTRTAIRRMFNLEGNCEA 180

Query: 181 LHRSCGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVL 182
           LHRSCGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVL
Sbjct: 181 LHRSCGCCGLCVEDEVQREHCESVCDFATHVFCHTCALCQEGRELRRRMPHPGFNARPVL 240

[Close]

BLAST of Carg15281 vs. TrEMBL
Match: tr|A0A0D2QX05|A0A0D2QX05_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G419400 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.5e-52
Identity = 119/251 (47.41%), Postives = 135/251 (53.78%), Query Frame = 0


Query: 1   MANGENLEESSPLLGKVVE-KADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDY 60
           MAN  NLEESSPLL K V  + DEK    ++      A P                G  +
Sbjct: 1   MANNNNLEESSPLLSKQVSVEEDEKKNLNVNNSTDVAASPA------------ARTGAGF 60

Query: 61  GWTADGLP-IHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD------------------ 120
           GWTADGLP +HGSV+GEP+GR+QW++ L ACLGR+DEFCSSD                  
Sbjct: 61  GWTADGLPLVHGSVVGEPMGRSQWDSSLLACLGRNDEFCSSDVEVCLLGSVAPCVLYGSN 120

Query: 121 ---------------------------------------------------LEGNCEALH 180
                                                              LEG CEAL+
Sbjct: 121 VERLGSAPGTFANHCLPYSGLYLIGNSFFGWNCLAPWFSYPTRTAIRRKFNLEGTCEALN 180

[Close]

BLAST of Carg15281 vs. TrEMBL
Match: tr|A0A1Q3BLY0|A0A1Q3BLY0_CEPFO (PLAC8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12367 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.3e-52
Identity = 121/251 (48.21%), Postives = 137/251 (54.58%), Query Frame = 0


Query: 1   MANG--ENLEESSPLLGKVVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCD 60
           MAN   +  EESSPLL K VE+A+ K  +   T  R+   P              G GC 
Sbjct: 1   MANNSDKKYEESSPLLNKPVEEAENKSNNVSDT--RSTVSPKIQEAPV------AGAGC- 60

Query: 61  YGWTADGLPI-HGSVMGEPVGRAQWETGLCACLGRHDEFCSSD----------------- 120
            GWTADGLP+ HGSVMGEP+GRA W++ L ACLGR+DEFCSSD                 
Sbjct: 61  -GWTADGLPLGHGSVMGEPMGRAHWDSNLFACLGRNDEFCSSDLEVCLLGSVAPCVLYGS 120

Query: 121 ----------------------------------------------------LEGNCEAL 180
                                                               LEG CE+L
Sbjct: 121 NVERLGSTPGTFANHCLSYSGLYLIGNSFFGWNCLAPWFSYPSRSAIRRRFNLEGTCESL 180

[Close]

BLAST of Carg15281 vs. TrEMBL
Match: tr|A0A1U8M3Y6|A0A1U8M3Y6_GOSHI (cell number regulator 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107933735 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 118/251 (47.01%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 1   MANGENLEESSPLLGK-VVEKADEKDTHRISTGDRADAVPXXXXXXXXXXXXNGGDGCDY 60
           MAN  NLEESSPLL K V  + DEK    ++      A P                G  +
Sbjct: 1   MANNNNLEESSPLLSKHVGVEEDEKKNLNVNNSTDVAASP------------EARTGAGF 60

Query: 61  GWTADGLP-IHGSVMGEPVGRAQWETGLCACLGRHDEFCSSD------------------ 120
           GWTADGLP +HGSV+GEP+GR+QW++ L ACLGR+DEFCSSD                  
Sbjct: 61  GWTADGLPLVHGSVVGEPMGRSQWDSSLLACLGRNDEFCSSDVEVCLLGSVAPCVLYGSN 120

Query: 121 ---------------------------------------------------LEGNCEALH 180
                                                              LEG CEAL+
Sbjct: 121 VERLGSAPGTFANHCLPYSGLYLIGNSFFGWNCLAPWFSYSTRTAIRRKFNLEGTCEALN 180

The following BLAST results are available for this feature:

BLAST of Carg15281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926040.1	4.3e-88	72.40	cell number regulator 8-like [Cucurbita moschata]	[more]
XP_022979164.1	2.1e-87	67.20	cell number regulator 8-like [Cucurbita maxima]	[more]
XP_023543087.1	2.1e-87	67.20	cell number regulator 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963293.1	2.4e-75	59.60	cell number regulator 8-like [Cucurbita moschata]	[more]
XP_023518870.1	2.4e-75	59.60	cell number regulator 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15281 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37110.1	1.4e-45	42.28	PLAC8 family protein	[more]
AT3G18470.1	7.2e-05	28.91	PLAC8 family protein	[more]
AT2G40935.1	1.2e-04	45.65	PLAC8 family protein	[more]

BLAST of Carg15281 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B4FUS3\|CNR8_MAIZE	1.1e-31	40.61	Cell number regulator 8 OS=Zea mays OX=4577 GN=CNR8 PE=2 SV=1	[more]
sp\|D9HP26\|CNR10_MAIZE	1.5e-04	26.03	Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1	[more]
sp\|B4FF80\|CNR5_MAIZE	1.5e-04	38.24	Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1	[more]
sp\|D9HP19\|CNR3_MAIZE	4.5e-04	47.46	Cell number regulator 3 OS=Zea mays OX=4577 GN=CNR3 PE=2 SV=1	[more]

BLAST of Carg15281 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLN1\|A0A1S3BLN1_CUCME	9.8e-73	62.95	cell number regulator 8 OS=Cucumis melo OX=3656 GN=LOC103491200 PE=4 SV=1	[more]
tr\|A0A0A0KH41\|A0A0A0KH41_CUCSA	1.9e-68	58.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444990 PE=4 SV=1	[more]
tr\|A0A0D2QX05\|A0A0D2QX05_GOSRA	2.5e-52	47.41	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G419400 PE=4 ...	[more]
tr\|A0A1Q3BLY0\|A0A1Q3BLY0_CEPFO	4.3e-52	48.21	PLAC8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12...	[more]
tr\|A0A1U8M3Y6\|A0A1U8M3Y6_GOSHI	1.4e-50	47.01	cell number regulator 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107933735 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15281-RA	Carg15281-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..32
None	No IPR available	PANTHER	PTHR15907:SF91	SUBFAMILY NOT NAMED	coord: 49..102
None	No IPR available	PANTHER	PTHR15907:SF91	SUBFAMILY NOT NAMED	coord: 101..180
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 101..180 coord: 49..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15281	Cla018274	Watermelon (97103) v1	carwmB0546
Carg15281	Csa6G444990	Cucumber (Chinese Long) v2	carcuB0579
Carg15281	MELO3C014254	Melon (DHL92) v3.5.1	carmeB0553
Carg15281	ClCG04G008880	Watermelon (Charleston Gray)	carwcgB0533
Carg15281	CSPI06G24220	Wild cucumber (PI 183967)	carcpiB0585
Carg15281	Cucsa.124230	Cucumber (Gy14) v1	carcgyB0624
Carg15281	CmaCh07G009360	Cucurbita maxima (Rimu)	carcmaB0765
Carg15281	CmaCh03G012500	Cucurbita maxima (Rimu)	carcmaB0763
Carg15281	CmoCh07G009800	Cucurbita moschata (Rifu)	carcmoB0744
Carg15281	CmoCh03G012480	Cucurbita moschata (Rifu)	carcmoB0742
Carg15281	Lsi01G013590	Bottle gourd (USVL1VR-Ls)	carlsiB495
Carg15281	Cp4.1LG10g04830	Cucurbita pepo (Zucchini)	carcpeB0772
Carg15281	Cp4.1LG19g04300	Cucurbita pepo (Zucchini)	carcpeB0774
Carg15281	CsGy6G023620	Cucumber (Gy14) v2	carcgybB0555
Carg15281	MELO3C014254.2	Melon (DHL92) v3.6.1	carmedB0559
Carg15281	CsaV3_6G039390	Cucumber (Chinese Long) v3	carcucB0586
Carg15281	Cla97C04G075560	Watermelon (97103) v2	carwmbB0574
Carg15281	Bhi03G001299	Wax gourd	carwgoB0658

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15281	Carg25796	Silver-seed gourd	carcarB436

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15281	Silver-seed gourd	carcarB194
Carg15281	Cucumber (Gy14) v2	carcgybB0553
Carg15281	Cucumber (Gy14) v1	carcgyB0627
Carg15281	Cucurbita maxima (Rimu)	carcmaB0764
Carg15281	Cucurbita moschata (Rifu)	carcmoB0743
Carg15281	Cucurbita moschata (Rifu)	carcmoB0740
Carg15281	Cucurbita pepo (Zucchini)	carcpeB0777
Carg15281	Cucurbita pepo (Zucchini)	carcpeB0778
Carg15281	Wild cucumber (PI 183967)	carcpiB0583
Carg15281	Cucumber (Chinese Long) v2	carcuB0577
Carg15281	Cucumber (Chinese Long) v3	carcucB0584
Carg15281	Bottle gourd (USVL1VR-Ls)	carlsiB498
Carg15281	Melon (DHL92) v3.5.1	carmeB0552
Carg15281	Melon (DHL92) v3.6.1	carmedB0558
Carg15281	Watermelon (Charleston Gray)	carwcgB0530
Carg15281	Watermelon (97103) v1	carwmB0543
Carg15281	Watermelon (97103) v2	carwmbB0572