Carg25733 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25733
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	Cucurbita_argyrosperma_scaffold_244 : 209288 .. 212381 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGATTCTTCTTTTCAACCCTAATTCTTCCATCGCCATACCTGAGCCCTAATCCTTTTCTGCACCTTCAATGCCGACGAATTGCGAAGGTTCGCCTCAAATGGGTCAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACCGATTTGAAGGCTGCTTCCCTCCTCAAGGACGCCATTAACCGCTCTTCCACTGGCTTCATTACTGCTAAGTCCATCGCCGATTGGCCAAAGCTGCTCGGCCTCACCATCCCTGTTCTTCGATTCATCCGGAGGTATCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCGCTGCTTTTAGATCAGCAACAGAGTAGTATTCACCAAATTCATGAGAGCGACACTGTCGAAAGACTTTGTAGAGTTCTTATGATGATGAAAAATAGGGCTATTCCTCTTCAGTCGTTGCGTCCTTTAGAATGGGATCTAGGTCTCCCGTGTGGTTTTGAGAGGTCATTGATTCCCAAGTATCCCGATCATTTTCGATTAGTGAAGGCCTCCAATGGGGATTGGTGTCTGCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCGGCCTTGCAAAGGAGCAATGAGAGCTCTGAACTGGGAGATGCGTATAGGCAATTCAAGAGGGGGCGTACCACATTGGCTTTTCCCTATGAGTTTTCCGAGGGGATATGGGGCACAAAAGAAGGTAAAAGCTTGGATGGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATATGAGAGTTGCAGGCAAATTGACCCCAACAGTGATCTCATGGAGAAACGAGTTGTTGGGGTTCTTCATGAGCTTTTGAGTCTCACTCTTCACAAGAAAACTAAAAGAAACTATTTGAGAAGCTTGAGAGAGGAATTGAATCTTCCCCATAAGTTCACTCGAATCTTCACCCGTTATCCCGGAATCTTCTACCTGTCTTTGAAGTGTAAGACCACGACTGTTTCTCTTAGGGAAGGGTATCAGCGAGGAAAGCTAGTGAACCCACATCCTTTGACACGTCTAAGGGAAAAGTTTTATCATGTCATGAAGACTGGTCTGTTTTACCGGGGGAAAGGTGCTGCATTGATAGAAAAGGAGGGCATTCTGCTTAATAATACAGCCGAGGAGACGGTGGAGAATGGTTTGGATGTTGAATCAGATGAGACGGGTGATGATGAATGCTTAGAGGACGAGAACTCGCAGGCAGAGGAATCTGATTCAGATTAATGGAGTCTGATAACTGGATCCTCCCTTCGCTAGTTGCCAAAAAAGAGGGACAAAAATCAAGCCTCCTATGCATATATATGCGAAATGTGAGTTTACCCTTTTCCTAGTTATTCCTTCATTAGTTTCGTTCATCACTTGTCTTGGAGGAACTTAAAGTATTGGGAAATTAGGGAGCAATTGATTTGATTGCGATTTAGACGGATTGAGTGATATCTTTTGTTTTGCTTGCAGTTTTATTGGCTGTTAACTCCATTCGAGGGATCAACATTGTCCCATGCAAAGCAATGCTTTATAGTTTATGCGATAAAGACATAAGCTATAGAGGAAAGAAATGGTTTGTGGTGACAGAGATTTGGAAAGATGGGACTATCCGCTTTCCCGACCCAGGAAAAGAAATGCTGAAGCTTTGCCATGTAAGAAACAGCTTCGTTTTCATACTAAATGACGTTCGAACTCAAAACTTGATCCAGCAAACGGTCAAAGAGGACATGGCTGGTAAAGAAATTATATATTTGCTTCTTTAGTTACATAATTTATGACCTTCCTTTGTTTCTGTTATACATGCATTGAAGGCTGAAAATAGTTGTTTGGGCACTTTTCCTCTAGAAGGTTAGACAATGAGAGTCATTTTGTTGGCGTTTCTCTGTTAGAAATCATATCTGGAATTTTATTTGTTAGGTTGTAGACTATGAACAATGTTGAGACAAGCTAAGCTATGCATGATTTTCATGGTGCTTGTGTTGTAAAGCTTATCAAGCTTACATTTATAAATTTCATTCGTCTCAGCCTTTTCAGGTTAGACCGAAGTGTGTTGGCTCTGTTGCATGCATTTAGTGATATGAACCAAGACATTAATCATGTAAGATAAACTTCAAGGAAGATGTGAAGAAAATGTTGTTCAAATTATCACACTATGTTGCCATTCATGTCACATTAAATAAGAATCAAACTTCATTTATTCTTAAATGTTTACAAATTTTGGGTAGAGTTATGATGTTTCTTTATTGTATTTTAAGGTTAGTGGTTAATTATGGTCATAAAGTACGAAGGTTACCATTCATGAAATGCCTCATGGAATGTCAAGAATTTTCATTTTGTGGCTATATAAAGTTATGTATGTTGTCTTTGTGATGTAGACTTGGAAAAGGCAGTAAAAATAGCTTTTGTGCTTTCTTCTCTACAATTTTATGTGGTTTATATTGCATATTTAGAATCATTCAAGCTTGACATGATTGATATTGCTCGTGGAGTGAATCGAATCTCAAACAAGTGTTCTTGACTTGAGATATTTGATCAACACGGTAATCTGAATTTTATTTTCCCCTGGAGTGAAATCAAATTGATTTTTGGGTTTTTAGCATTTGTGAACTAGGAGTTGGCATATCCAAGCTCTTACGAGGGGTTTTAAATAGGTATTCCTTATCATTTAGTGTACGAGGGTTTTTAGATTCAACTGACTAGGTATTCCTTATCATTTAGTTTACTCATAGATAGACCAATTCATATATTTGAACGGTAATTGGTATTCCTTAACCTTTTGTACTATTACCGTTCAAGAAGAGGTAGGTTCTTTAGGATGCTACTCCAAATGGGAATTTATTGAGGTTGTTCGTGGATAAGATAGGATACTAATTGTAAAACGAAGGGGTTTTTCCACTCTAGAAGGAGGCATCATAGATCTATACCCAAATTTTAGAAAACGAAGGATTGAGCCGAGCATTAGGGCAAAGAGGCTCGAAAAAATTAGTTTTTTTATTTTTTTATTTTTTTATTAATCGTCAGAGTCATATAATTGTTGCCATAGAAGAATGTGTTTAA

mRNA sequence

ATGAAGAGATTCTTCTTTTCAACCCTAATTCTTCCATCGCCATACCTGAGCCCTAATCCTTTTCTGCACCTTCAATGCCGACGAATTGCGAAGGTTCGCCTCAAATGGGTCAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACCGATTTGAAGGCTGCTTCCCTCCTCAAGGACGCCATTAACCGCTCTTCCACTGGCTTCATTACTGCTAAGTCCATCGCCGATTGGCCAAAGCTGCTCGGCCTCACCATCCCTGTTCTTCGATTCATCCGGAGGTATCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCGCTGCTTTTAGATCAGCAACAGAGTAGTATTCACCAAATTCATGAGAGCGACACTGTCGAAAGACTTTGTAGAGTTCTTATGATGATGAAAAATAGGGCTATTCCTCTTCAGTCGTTGCGTCCTTTAGAATGGGATCTAGGTCTCCCGTGTGGTTTTGAGAGGTCATTGATTCCCAAGTATCCCGATCATTTTCGATTAGTGAAGGCCTCCAATGGGGATTGGTGTCTGCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCGGCCTTGCAAAGGAGCAATGAGAGCTCTGAACTGGGAGATGCGTATAGGCAATTCAAGAGGGGGCGTACCACATTGGCTTTTCCCTATGAGTTTTCCGAGGGGATATGGGGCACAAAAGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATATGAGAGTTGCAGGCAAATTGACCCCAACAGTGATCTCATGGAGAAACGAGTTGTTGGGGTTCTTCATGAGCTTTTGAGTCTCACTCTTCACAAGAAAACTAAAAGAAACTATTTGAGAAGCTTGAGAGAGGAATTGAATCTTCCCCATAAGTTCACTCGAATCTTCACCCGTTATCCCGGAATCTTCTACCTGTCTTTGAAGTGTAAGACCACGACTGTTTCTCTTAGGGAAGGGTATCAGCGAGGAAAGCTAGTGAACCCACATCCTTTGACACGTCTAAGGGAAAAGTTTTATCATGTCATGAAGACTGGTCTGTTTTACCGGGGGAAAGGTGCTGCATTGATAGAAAAGGAGGGCATTCTGCTTAATAATACAGCCGAGGAGACGGTGGAGAATGGTTTGGATGTTGAATCAGATGAGACGGTTTTATTGGCTGTTAACTCCATTCGAGGGATCAACATTGTCCCATGCAAAGCAATGCTTTATAGTTTATGCGATAAAGACATAAGCTATAGAGGAAAGAAATGGTTTGTGGTGACAGAGATTTGGAAAGATGGGACTATCCGCTTTCCCGACCCAGGAAAAGAAATGCTGAAGCTTTGCCATAGTCATATAATTGTTGCCATAGAAGAATGTGTTTAA

Coding sequence (CDS)

ATGAAGAGATTCTTCTTTTCAACCCTAATTCTTCCATCGCCATACCTGAGCCCTAATCCTTTTCTGCACCTTCAATGCCGACGAATTGCGAAGGTTCGCCTCAAATGGGTCAAGAATCGGAGTCTCGATCACATCATCGACACGGAGACCGATTTGAAGGCTGCTTCCCTCCTCAAGGACGCCATTAACCGCTCTTCCACTGGCTTCATTACTGCTAAGTCCATCGCCGATTGGCCAAAGCTGCTCGGCCTCACCATCCCTGTTCTTCGATTCATCCGGAGGTATCCAACTCTCTTTCACGAATTTCCTCATTCTCGTTACGCTAATTTGCCTTGCTTTCGTTTGACGGATACCGCGCTGCTTTTAGATCAGCAACAGAGTAGTATTCACCAAATTCATGAGAGCGACACTGTCGAAAGACTTTGTAGAGTTCTTATGATGATGAAAAATAGGGCTATTCCTCTTCAGTCGTTGCGTCCTTTAGAATGGGATCTAGGTCTCCCGTGTGGTTTTGAGAGGTCATTGATTCCCAAGTATCCCGATCATTTTCGATTAGTGAAGGCCTCCAATGGGGATTGGTGTCTGCGGCTTATGGAATGGCGCGAGGAATTTGCAGTTTCGGCCTTGCAAAGGAGCAATGAGAGCTCTGAACTGGGAGATGCGTATAGGCAATTCAAGAGGGGGCGTACCACATTGGCTTTTCCCTATGAGTTTTCCGAGGGGATATGGGGCACAAAAGAAGAGTTTCAGAAGTTACCTTACATTTCTCCATATGAGAGTTGCAGGCAAATTGACCCCAACAGTGATCTCATGGAGAAACGAGTTGTTGGGGTTCTTCATGAGCTTTTGAGTCTCACTCTTCACAAGAAAACTAAAAGAAACTATTTGAGAAGCTTGAGAGAGGAATTGAATCTTCCCCATAAGTTCACTCGAATCTTCACCCGTTATCCCGGAATCTTCTACCTGTCTTTGAAGTGTAAGACCACGACTGTTTCTCTTAGGGAAGGGTATCAGCGAGGAAAGCTAGTGAACCCACATCCTTTGACACGTCTAAGGGAAAAGTTTTATCATGTCATGAAGACTGGTCTGTTTTACCGGGGGAAAGGTGCTGCATTGATAGAAAAGGAGGGCATTCTGCTTAATAATACAGCCGAGGAGACGGTGGAGAATGGTTTGGATGTTGAATCAGATGAGACGGTTTTATTGGCTGTTAACTCCATTCGAGGGATCAACATTGTCCCATGCAAAGCAATGCTTTATAGTTTATGCGATAAAGACATAAGCTATAGAGGAAAGAAATGGTTTGTGGTGACAGAGATTTGGAAAGATGGGACTATCCGCTTTCCCGACCCAGGAAAAGAAATGCTGAAGCTTTGCCATAGTCATATAATTGTTGCCATAGAAGAATGTGTTTAA

Protein sequence

MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSEGIWGTKEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDETVLLAVNSIRGINIVPCKAMLYSLCDKDISYRGKKWFVVTEIWKDGTIRFPDPGKEMLKLCHSHIIVAIEECV

Homology

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BLAST of Carg25733 vs. NCBI nr
Match: XP_022928600.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 783.1 bits (2021), Expect = 5.3e-223
Identity = 389/405 (96.05%), Postives = 389/405 (96.05%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           MK FFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD
Sbjct: 1   MKSFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AINRSSTGFITAKSIAD PKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL
Sbjct: 61  AINRSSTGFITAKSIADCPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP
Sbjct: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPMSFPR 240

Query: 241 GIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G    K      EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK
Sbjct: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET
Sbjct: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 405

[Close]

BLAST of Carg25733 vs. NCBI nr
Match: XP_023543563.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 779.6 bits (2012), Expect = 5.9e-222
Identity = 385/405 (95.06%), Postives = 388/405 (95.80%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           MK FFFSTLILPSP+LSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD
Sbjct: 1   MKSFFFSTLILPSPFLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL
Sbjct: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQQ+SSIHQIHESDTVERLCRVLMMMK RAIPLQSLRPLEWDLGLPCGFERSLIPKYP
Sbjct: 121 LLDQQESSIHQIHESDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESS+LGDAYRQFKRGRTTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSQLGDAYRQFKRGRTTLAFPMSFPR 240

Query: 241 GIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G    K      EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK
Sbjct: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           FYHVMKTGLFYRGKGAALIEKEGILLNNTAEE VENGLDVESDET
Sbjct: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEEMVENGLDVESDET 405

[Close]

BLAST of Carg25733 vs. NCBI nr
Match: XP_023543562.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.9 bits (2010), Expect = 1.0e-221
Identity = 384/405 (94.81%), Postives = 388/405 (95.80%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           MK FFFSTLILPSP+LSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD
Sbjct: 1   MKSFFFSTLILPSPFLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL
Sbjct: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQQ+SSIHQIHESDTVERLCRVLMMMK RAIPLQSLRPLEWDLGLPCGFERSLIPKYP
Sbjct: 121 LLDQQESSIHQIHESDTVERLCRVLMMMKTRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESS+LGDAYRQFKRGRTTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSQLGDAYRQFKRGRTTLAFPMSFPR 240

Query: 241 GIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G    K      EEFQKLPY+SPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQKKVKAWMEEFQKLPYLSPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK
Sbjct: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           FYHVMKTGLFYRGKGAALIEKEGILLNNTAEE VENGLDVESDET
Sbjct: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEEMVENGLDVESDET 405

[Close]

BLAST of Carg25733 vs. NCBI nr
Match: XP_022928751.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 777.7 bits (2007), Expect = 2.2e-221
Identity = 387/405 (95.56%), Postives = 387/405 (95.56%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           MK FFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD
Sbjct: 1   MKIFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AINRSSTGFITAKSIAD PKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL
Sbjct: 61  AINRSSTGFITAKSIADCPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFER LIPKYP
Sbjct: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERFLIPKYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPMSFPR 240

Query: 241 GIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G    K      EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQKKVKAWMEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK
Sbjct: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           FYHVMKTGLFYRGKGAALIEKEGILLNNTAEE VENGLDVESDET
Sbjct: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEEMVENGLDVESDET 405

[Close]

BLAST of Carg25733 vs. NCBI nr
Match: XP_022967804.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 758.4 bits (1957), Expect = 1.4e-215
Identity = 375/405 (92.59%), Postives = 380/405 (93.83%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           MK F FSTLIL SPYLSPNPFL LQCR IAKVRLKWVKNRSLDHIIDTETDLKAASLLKD
Sbjct: 1   MKSFSFSTLILRSPYLSPNPFLRLQCRGIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AI RSSTGF+T KSIADW KLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL
Sbjct: 61  AIKRSSTGFVTVKSIADWQKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQQ++S+HQIHESDTVERLCRVLMMMKNRAIPL SLRPLEWDLGLPCGFERSLIPKYP
Sbjct: 121 LLDQQETSVHQIHESDTVERLCRVLMMMKNRAIPLPSLRPLEWDLGLPCGFERSLIPKYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRLMEW EEFAVSALQRSNESSELGDAYRQFKRGRTTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLMEWAEEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPMSFPR 240

Query: 241 GIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G    K      EEFQKLPY+SPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQKKVKAWMEEFQKLPYVSPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK
Sbjct: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           FYHVMKTGLFYRGKGAALIEKEGILLNNTAEE VENGLDVESDET
Sbjct: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEEMVENGLDVESDET 405

[Close]

BLAST of Carg25733 vs. TAIR10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 533.9 bits (1374), Expect = 1.0e-151
Identity = 251/372 (67.47%), Postives = 307/372 (82.53%), Query Frame = 0


Query: 29  IAKVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGLTIPV 88
           + KVRLKWVKN++LDH+IDTETDLKAA +LKDAI RS TGF+TAKS+ADW KLLGLT+PV
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87

Query: 89  LRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLCRVLMMM 148
           LRF+RRYPTLFHEFPH+RYA+LPCF+LTDTAL+LD Q+  IHQ HE+DTVERLCRVLMMM
Sbjct: 88  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 147

Query: 149 KNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWREEFAVSA 208
           +++ + L+SL  L++DLGLP  +E++L+ KYPDHF  VKASNG+ CL+L++WR+EFA SA
Sbjct: 148 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEFAFSA 207

Query: 209 LQRSNESSELG---DAYRQFKRGRTTLAFPYEFSEGIWGTK------EEFQKLPYISPYE 268
           LQ+ NE +++      YR+FKRG++TL FP  F  G    K      +EFQKLPYISPY+
Sbjct: 208 LQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD 267

Query: 269 SCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGI 328
               IDP SDLMEKR V VLHELLSLT+HKKTKRNYLRS+R ELN+PHKFTR+FTRYPGI
Sbjct: 268 DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGI 327

Query: 329 FYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIEKEGIL 388
           FYLSLKCKTTTV L+EGY+RGKLV+PHPLTRLR+KFYHVM+TG  YR +G  ++ KE +L
Sbjct: 328 FYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSKEELL 387

Query: 389 LNNTAEETVENG 392
           L+   ++  E G
Sbjct: 388 LDRPEDDLEEEG 399

[Close]

BLAST of Carg25733 vs. TAIR10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 253.4 bits (646), Expect = 2.7e-67
Identity = 156/400 (39.00%), Postives = 220/400 (55.00%), Query Frame = 0


Query: 21  FLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPK 80
           F + Q   +  V+LKWVK+R LD ++  E  L+A   L   I+ S    +    +     
Sbjct: 24  FFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRG 83

Query: 81  LLGL--TIPVLRFIRRYPTLF--HEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESD 140
            LGL   + +  FIRRYP +F  H +  S   ++PCF LT   + L  ++  + +++E D
Sbjct: 84  QLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERD 143

Query: 141 TVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLR 200
            + RLC++LM+   R + L S+  L WDLGLP  +  SLI K+PD F LVK S+    L+
Sbjct: 144 VLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLK 203

Query: 201 LMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSEGIWGTK-------EEF 260
           L+ W E  AVS +Q      ++G+  R        +AFP +F+ G +G K       +E+
Sbjct: 204 LIHWDEHLAVSQMQL---REDVGNDER--------MAFPVKFTRG-FGLKRKSIEWLQEW 263

Query: 261 QKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKF 320
           Q+LPY SPY     +DP +DL EKR VGV HELL LT+ KKT+R  + +LR+   LP KF
Sbjct: 264 QRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKF 323

Query: 321 TRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKG 380
           T++F R+PGIFY+S+KC T TV LRE Y R  L+  HPL  +REKF ++M  G   R +G
Sbjct: 324 TKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSRG 383

Query: 381 AALIEKEGILLNNTAEETVENGLDVESDETVLLAVNSIRG 410
                 E  L  N     ++    V SDE   L  N I G
Sbjct: 384 LYQKSVEADLEKN----NIKTSYPVWSDEEEELDNNLISG 407

[Close]

BLAST of Carg25733 vs. TAIR10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-49
Identity = 111/339 (32.74%), Postives = 187/339 (55.16%), Query Frame = 0


Query: 35  KWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGLTIPVLRFIRR 94
           K+V++R LDH ++ E +L+    +KD I       +    I      L + +  + FIR 
Sbjct: 30  KFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRS 89

Query: 95  YPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIH--QIHESDTVERLCRVLMMMKNRA 154
           +P++F EF        P   LT   L  D  +  ++  + ++    +RL ++LM+ +   
Sbjct: 90  FPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMINRINK 149

Query: 155 IPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKAS----NGDWCLRLMEWREEFAVSA 214
           IPL+ L  L+WDLGLP  +  +++P++PD+FR++K+     +G+  L L+ W  E AVS 
Sbjct: 150 IPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGE--LELVCWSNEHAVSV 209

Query: 215 LQRSNESSELGDAYRQFKRGRTTLAFPYEFSEGIWGTK------EEFQKLPYISPYESCR 274
           L++   +   G    ++ +G + +AFP +FS G    K      +++QKLPYISPYE+  
Sbjct: 210 LEKKARTLRKG----EYTKG-SAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENAL 269

Query: 275 QIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYL 334
            +   SD  +K    VLHE+++L + KK +++ +  L E + L  +F R+   +PGIFYL
Sbjct: 270 HLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYL 329

Query: 335 SLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKT 362
           S K +T TV LR+GY+RG L+  + L   R ++  +M T
Sbjct: 330 SSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNT 361

[Close]

BLAST of Carg25733 vs. TAIR10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 181.8 bits (460), Expect = 9.8e-46
Identity = 115/344 (33.43%), Postives = 179/344 (52.03%), Query Frame = 0


Query: 25  QCRRIAKVRLKWVKNRSLDHI--IDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLL 84
           Q R    V +KW ++   D+I  I   + LK+   LK+ I +     I   +I+   +  
Sbjct: 20  QKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF 79

Query: 85  GLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLC 144
            ++  +  F+R++P++F EF    Y NLP FRLT  A  LD+Q+  ++Q    D  +RL 
Sbjct: 80  DVSTKIAHFLRKFPSIFEEFVGPEY-NLPWFRLTPEATELDRQERVVYQTSADDLRDRLK 139

Query: 145 RVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWRE 204
           ++++M K+  +PL  ++ ++W LGLP  + +         FR V   +G   L +     
Sbjct: 140 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGG 199

Query: 205 EFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSEG------IWGTKEEFQKLPYIS 264
           +  +S LQ++      G+   +       + FP   S+G      I     EFQKLPY+S
Sbjct: 200 DKVLSVLQKNAMKKRRGEVSLE------EIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 259

Query: 265 PYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRY 324
           PY+    +DP+SD+ EKRVVG LHELL L +    +R  L  L++   LP K  + F R+
Sbjct: 260 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 319

Query: 325 PGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMK 361
           P IFYLS+K KT T  LRE Y+    V  HP+  +R+K+  +MK
Sbjct: 320 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMK 356

[Close]

BLAST of Carg25733 vs. TAIR10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-44
Identity = 122/354 (34.46%), Postives = 183/354 (51.69%), Query Frame = 0


Query: 25  QCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGL 84
           Q R     R+KWV +  LD  +  E +LK    LKD I  S +  +   S++    L+ L
Sbjct: 14  QRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNL 73

Query: 85  TIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIH--QIHESDTVERLC 144
            I    F ++YP++F  F  S    L   RLT  AL L +++ +IH      + TV+RL 
Sbjct: 74  HITAAAFFQKYPSVFTTFQPSPSHPLH-VRLTPQALTLHKEEETIHLSPPQRNVTVQRLT 133

Query: 145 RVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVK-----ASNGDWCLRL 204
           + LM+    ++PL  L    +DLGLP  +  SLI  YP++F + +            L +
Sbjct: 134 KFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTI 193

Query: 205 MEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFP--YEFSEGIWGTKEEFQKLPYI 264
              R    VS ++R  E++  G   ++  R R ++ FP  YE  + +    E++Q LPYI
Sbjct: 194 SSRRNNLPVSEMER-REATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYI 253

Query: 265 SPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTR 324
           SPYE+   +   SD  EK  V VLHELL L + KKT+ + +  L E L    +F +    
Sbjct: 254 SPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVH 313

Query: 325 YPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVM-KTGLFYRGK 369
           +PGIFY+S K +T TV LRE Y +  L+  HPL  +R ++ ++M K+G   RGK
Sbjct: 314 HPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSG---RGK 362

[Close]

BLAST of Carg25733 vs. Swiss-Prot
Match: sp|Q65XL5|WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.7e-37
Identity = 116/384 (30.21%), Postives = 184/384 (47.92%), Query Frame = 0


Query: 27  RRIAKVRLKWVKNRS---LDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLG 86
           RR+A V    VK R     D++I  +  LK    L++ +  +    ++ + +  + + LG
Sbjct: 51  RRLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLG 110

Query: 87  LTIP--VLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERL 146
           LT    ++  ++R+P +F       Y+    FRLT  A  L   +  +    E   V +L
Sbjct: 111 LTRKRRLIALLKRFPGVFEVVEEGVYSLR--FRLTPAAERLYLDELHLKNESEGLAVTKL 170

Query: 147 CRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWR 206
            ++LMM +++ I ++ +  L+ DLGLP  F  ++  +YP +FR+V+   G   L L  W 
Sbjct: 171 RKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG-LELTHWD 230

Query: 207 EEFAVSALQRSNESSELGDAY-------RQFKRGRTTLAFPYEFSEGIWGTKEEFQKLPY 266
            E AVSA + + E +   +         R  K  R  L    + S G      +F+++PY
Sbjct: 231 PELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPY 290

Query: 267 ISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFT 326
           ISPY     +   S   EK   GV+HE+LSLTL K+T  ++L   REE         +  
Sbjct: 291 ISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLI 350

Query: 327 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 386
           R+P +FY+SLK    +V LRE Y+  +LV    L  L+EK   ++    F R +G     
Sbjct: 351 RHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPR-RGVPATS 410

Query: 387 KEGILLNNTAEETVENGLDVESDE 399
           +E    N  A + +  G DVE DE
Sbjct: 411 EEADRTNGAA-QMLSEGSDVEDDE 429

[Close]

BLAST of Carg25733 vs. Swiss-Prot
Match: sp|B6TTV8|WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.8e-34
Identity = 101/338 (29.88%), Postives = 161/338 (47.63%), Query Frame = 0


Query: 38  KNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGLTIP--VLRFIRRY 97
           K    D +I  +  LK    L++ +       ++ + +  + + LGLT    ++  +RR+
Sbjct: 59  KEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRF 118

Query: 98  PTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPL 157
           P +F       Y+    FRLT  A  L   +  +    E   V +L ++LMM + + I +
Sbjct: 119 PGVFDVVEEGVYSLR--FRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILI 178

Query: 158 QSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNES 217
           + +  L+ DLGLP  F  ++  +YP +FR+V+   G   L L  W  E AVSA + + E 
Sbjct: 179 EKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGP-ALELTHWDPELAVSAAELAEEE 238

Query: 218 SELGDAY-------RQFKRGRTTLAFPYEFSEGIWGTKEEFQKLPYISPYESCRQIDPNS 277
           S   +A        R  K  R  L    + + G       F+++PYISPY     +   S
Sbjct: 239 SRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRSGS 298

Query: 278 DLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKT 337
           D  EK   GV+HE+LSLT+ K+T  ++L   REE         +  R+P +FY+S K   
Sbjct: 299 DEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKGDR 358

Query: 338 TTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYR 367
            +V LRE Y+  +LV  + L  L+EK   ++    F R
Sbjct: 359 DSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPR 393

[Close]

BLAST of Carg25733 vs. Swiss-Prot
Match: sp|A0MFS5|WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.5e-32
Identity = 98/356 (27.53%), Postives = 169/356 (47.47%), Query Frame = 0


Query: 31  KVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLGL--TIPV 90
           +  +K  K  + D ++  +  LK    ++  +       ++ + +  + + LGL      
Sbjct: 73  RAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRF 132

Query: 91  LRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLCRVLMMM 150
           +  +R+YP +F       Y+    F++T  A  L   +  I    E   V +L +++MM 
Sbjct: 133 IALLRKYPGVFEIVEEGAYSLR--FKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMS 192

Query: 151 KNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWREEFAVSA 210
            ++ I L+ +  L+ DLGLP  F  ++  +YP +FR+V    G   L L  W  E AVSA
Sbjct: 193 IDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGP-ALELTHWDPELAVSA 252

Query: 211 LQRSNESSELGDAY-------RQFKRGRTTLAFPYEFSEGIWGTKEEFQKLPYISPYESC 270
            + S + +   ++        R  K  R  L      S+       +F+ + YISPY+  
Sbjct: 253 AELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 312

Query: 271 RQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFY 330
             +   +   EK   GV+HELLSLT  K+T  ++L   REE     +   +  R+P +FY
Sbjct: 313 SHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFY 372

Query: 331 LSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIEKEG 378
           +SLK +  +V LRE Y+  +L++  PLT ++EK   ++    F R +G    ++EG
Sbjct: 373 VSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPR-RGGPRKDEEG 424

[Close]

BLAST of Carg25733 vs. Swiss-Prot
Match: sp|Q689D6|RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-26
Identity = 92/281 (32.74%), Postives = 139/281 (49.47%), Query Frame = 0


Query: 91  FIRRYPTLFHEFPHSRYANLPCFRLTDTAL--LLDQQQSSIHQIHESDTVERLCRVLMMM 150
           F+ ++P +F  + H     L C RLT  AL  +  + ++ + QI   D V RL +++MM 
Sbjct: 104 FLLKFPHVFEIYEHPVQRILYC-RLTRKALDQIRHEHEAVLDQI--PDAVTRLRKLVMMS 163

Query: 151 KNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKA-SNGDWCLRLMEWREEFAVS 210
               I L+ +R    + GLP  FE S+I K+P  FRL+      D  + ++E     ++ 
Sbjct: 164 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSIC 223

Query: 211 ALQRSNE-SSELGDAYRQFKRGRTTLAFPYEFSEG------IWGTKEEFQKLPYISPYES 270
           A++R  E          +  R    + FP  F  G      +W    ++Q+LPY SPYE 
Sbjct: 224 AIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVW----KWQRLPYWSPYED 283

Query: 271 CRQIDPNS----DLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRY 330
               D  S    + +EKR V  +HELLSLT+ KK     +   R  +NLP K      ++
Sbjct: 284 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 343

Query: 331 PGIFYLSLK---CKTTTVSLREGYQRGKLVNPHPLTRLREK 355
            GIFY+S +    K  TV LREGY+RG+LV P+ +   R +
Sbjct: 344 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRR 377

[Close]

BLAST of Carg25733 vs. TrEMBL
Match: tr|A0A1S3C3X3|A0A1S3C3X3_CUCME (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496725 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 7.1e-192
Identity = 338/404 (83.66%), Postives = 358/404 (88.61%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           M   FFS+LIL +   SP  FL+ Q R IAKVRLKWVKNRSLDHIIDTETDLKAA LLK+
Sbjct: 1   MNNLFFSSLILQNRCQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKN 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AI RSSTGFITAKSIA+W KLLGLTIPV+RFIRRYPTLFHEFPHSRY NLPCFRLTDTAL
Sbjct: 61  AIKRSSTGFITAKSIANWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYTNLPCFRLTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQ++SSIHQ HESDTVERLCRVLMMMK R +PLQSLRPLEWDLGLPC FERSL+P+YP
Sbjct: 121 LLDQEESSIHQFHESDTVERLCRVLMMMKTRVLPLQSLRPLEWDLGLPCDFERSLVPRYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHF+L KASNGDWCLRL EWREEFAVSALQRSNESS LGDAYRQFKRG TTLAFP  F  
Sbjct: 181 DHFQLFKASNGDWCLRLKEWREEFAVSALQRSNESSGLGDAYRQFKRGCTTLAFPLSFPR 240

Query: 241 G------IWGTKEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G      +    EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQNKVKAWMEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREE+NLPHKFTRIFTRYPGIFYLSLKCKTTTVSL+EGY++GKLV PHPLT +REK
Sbjct: 301 YLRSLREEMNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLKEGYRQGKLVTPHPLTCVREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDE 399
           FYHVMKTGL YRGKGAAL+EKEGILLNNTAEE  E G + ESDE
Sbjct: 361 FYHVMKTGLLYRGKGAALLEKEGILLNNTAEE-AEGGSNTESDE 403

[Close]

BLAST of Carg25733 vs. TrEMBL
Match: tr|A0A0A0KM36|A0A0A0KM36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218860 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 2.7e-191
Identity = 336/404 (83.17%), Postives = 358/404 (88.61%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKD 60
           M   FFS+LIL     SP  FL+ Q R IAKVRLKWVKNRSLDHIIDTETDLKAA LLK+
Sbjct: 1   MNNKFFSSLILQYRCQSPKLFLYHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKN 60

Query: 61  AINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTAL 120
           AI RSSTGFITAKSIA+W KLLGLTIPV+RFIRRYPTLFHEFPHSRYANLPCFR+TDTAL
Sbjct: 61  AIKRSSTGFITAKSIANWQKLLGLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRMTDTAL 120

Query: 121 LLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYP 180
           LLDQ++ SIHQ HESDTVERLCRVLMMMK R +PLQSLRPLEWDLGLPC FERSL+P+YP
Sbjct: 121 LLDQEEGSIHQFHESDTVERLCRVLMMMKTRTVPLQSLRPLEWDLGLPCDFERSLVPRYP 180

Query: 181 DHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSE 240
           DHFRLVKASNGDWCLRL EWREEFAVSALQRSNESS LGDAYRQFK+G TTLAFP  F  
Sbjct: 181 DHFRLVKASNGDWCLRLKEWREEFAVSALQRSNESSGLGDAYRQFKKGCTTLAFPQSFPR 240

Query: 241 G------IWGTKEEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300
           G      +    EEFQKLPYISPYESCRQ+DPNSDLMEKRVVGVLHELLSLTLHKKTKRN
Sbjct: 241 GYGAQNKVKAWMEEFQKLPYISPYESCRQVDPNSDLMEKRVVGVLHELLSLTLHKKTKRN 300

Query: 301 YLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREK 360
           YLRSLREE++LPHKFTRIFTRYPGIFYLSLKCKTTTVSL+EGYQRGKLV PHPLT LREK
Sbjct: 301 YLRSLREEMDLPHKFTRIFTRYPGIFYLSLKCKTTTVSLKEGYQRGKLVTPHPLTCLREK 360

Query: 361 FYHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDE 399
           FYHVMKTGL YRG+GAA++EKEGILLNNT  E VE+G + ESDE
Sbjct: 361 FYHVMKTGLLYRGRGAAMLEKEGILLNNTV-EVVEDGSNTESDE 403

[Close]

BLAST of Carg25733 vs. TrEMBL
Match: tr|M5VU13|M5VU13_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G084500 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.1e-165
Identity = 296/396 (74.75%), Postives = 327/396 (82.58%), Query Frame = 0


Query: 1   MKRFFFSTLILPSPYLSPNPFL---HLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASL 60
           M  F FS L+ P     P   L   H Q R IAKVRLKWVKNRSLDHIIDTETDLKAA L
Sbjct: 1   MSTFLFS-LLKPHTTSEPTKLLLHHHHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACL 60

Query: 61  LKDAINRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTD 120
           LKDAI RS TGF+TAKS ADW KLLGLT+PVLRF+RRYPTLF EFPH+RYA+LPCF+LTD
Sbjct: 61  LKDAIKRSPTGFLTAKSFADWQKLLGLTVPVLRFMRRYPTLFQEFPHARYASLPCFKLTD 120

Query: 121 TALLLDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIP 180
           TALLLD Q+ SIHQ HESDTVERLCRVLMM K++ IPLQSL PL+WDLGLP GFE+ L+P
Sbjct: 121 TALLLDSQEQSIHQTHESDTVERLCRVLMMTKSKTIPLQSLYPLKWDLGLPDGFEKVLVP 180

Query: 181 KYPDHFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYE 240
           KYPD FR++KASNG  CL++++W +E+AVS LQRS E  +LGD YRQFKRG+T LAFP  
Sbjct: 181 KYPDCFRIIKASNGIGCLKVIQWPKEYAVSELQRSKEGGDLGDEYRQFKRGQTVLAFPMN 240

Query: 241 FSEGIWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKT 300
           F +G  G K      EEFQKLPYISPYE  R IDPNSDLMEKRVVGVLHELLSLTLHKKT
Sbjct: 241 FPKGYGGQKKVRVWMEEFQKLPYISPYEDSRHIDPNSDLMEKRVVGVLHELLSLTLHKKT 300

Query: 301 KRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRL 360
           KRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTV+LREGYQRGKLVN HPLTR+
Sbjct: 301 KRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVALREGYQRGKLVNWHPLTRV 360

Query: 361 REKFYHVMKTGLFYRGKGAALIEKEGILLNNTAEET 388
           REKFYHVM+TGL YR KG  L+  + ILLN+   E+
Sbjct: 361 REKFYHVMRTGLLYRSKGVHLLSPQEILLNSVESES 395

[Close]

BLAST of Carg25733 vs. TrEMBL
Match: tr|B9SYU8|B9SYU8_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0041300 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.5e-165
Identity = 290/382 (75.92%), Postives = 326/382 (85.34%), Query Frame = 0


Query: 24  LQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKDAINRSSTGFITAKSIADWPKLLG 83
           LQCR I KVRLKWVKNRSLDHIID ETDLKAA LLKDAI RS TGF+TAKS+ADW KLLG
Sbjct: 32  LQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFLTAKSVADWQKLLG 91

Query: 84  LTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALLLDQQQSSIHQIHESDTVERLCR 143
           LT+PVLRF+RRYPTLF EFPH+RY NLPCFRLTDTALLLD Q+ SIHQ +E DTVERLCR
Sbjct: 92  LTVPVLRFLRRYPTLFSEFPHARYTNLPCFRLTDTALLLDSQEQSIHQNYERDTVERLCR 151

Query: 144 VLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPDHFRLVKASNGDWCLRLMEWREE 203
           +LMMMK+R +PLQSL PL+WDLGLP  FER LIPK+PD+F+ V+ASNG  CLRL +WREE
Sbjct: 152 LLMMMKSRTVPLQSLHPLKWDLGLPDNFERILIPKHPDYFQYVRASNGVGCLRLAQWREE 211

Query: 204 FAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSEGIWGTK------EEFQKLPYISP 263
           FAVSALQRS+ES E+G+ Y+QFKRG+TTLAFP  F  G    K      EEFQKLPYISP
Sbjct: 212 FAVSALQRSSESKEMGNKYQQFKRGQTTLAFPMSFPRGYGAQKKVRAWMEEFQKLPYISP 271

Query: 264 YESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYP 323
           YE  RQIDPNS+LMEKRVVG+LHELLSLT+HKKTKRNYLRS+REEL LPHKFTR+FTRYP
Sbjct: 272 YEDSRQIDPNSELMEKRVVGLLHELLSLTIHKKTKRNYLRSVREELILPHKFTRLFTRYP 331

Query: 324 GIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIEKEG 383
           GIFYLSLKCKTTTV+LREGYQRGKLVNPHP+ RLR+KFYHVM+TGL YR KG   I ++ 
Sbjct: 332 GIFYLSLKCKTTTVALREGYQRGKLVNPHPIARLRDKFYHVMRTGLLYRNKGENAIPQD- 391

Query: 384 ILLNNTAEETVENGLDVESDET 400
           ILLN+  +ETV +  + E DET
Sbjct: 392 ILLNDVEDETVLDESEEEEDET 412

[Close]

BLAST of Carg25733 vs. TrEMBL
Match: tr|A0A067JGI0|A0A067JGI0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_03036 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.5e-165
Identity = 298/404 (73.76%), Postives = 334/404 (82.67%), Query Frame = 0


Query: 9   LILPSPYLSPN-------PFLHLQCRRIAKVRLKWVKNRSLDHIIDTETDLKAASLLKDA 68
           L+ P   L PN        FL LQCR I KVRLKWVKNRSLDHIID ETDLKAA LLKDA
Sbjct: 15  LLQPKTPLEPNNNRNHLYHFL-LQCRSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDA 74

Query: 69  INRSSTGFITAKSIADWPKLLGLTIPVLRFIRRYPTLFHEFPHSRYANLPCFRLTDTALL 128
           I RS TGF+TAKS+ADW KLLGLT+PVLRF+RRYPTLF EFPH+RYANLPCFRLTDTALL
Sbjct: 75  IKRSPTGFLTAKSVADWHKLLGLTVPVLRFLRRYPTLFSEFPHARYANLPCFRLTDTALL 134

Query: 129 LDQQQSSIHQIHESDTVERLCRVLMMMKNRAIPLQSLRPLEWDLGLPCGFERSLIPKYPD 188
           LD Q+ SIHQ +ESDTVERLCRVLMMMK+R +PLQSL PL+WDLGLP  FE+ LIPKYPD
Sbjct: 135 LDSQEQSIHQNYESDTVERLCRVLMMMKSRTVPLQSLYPLKWDLGLPDNFEKILIPKYPD 194

Query: 189 HFRLVKASNGDWCLRLMEWREEFAVSALQRSNESSELGDAYRQFKRGRTTLAFPYEFSEG 248
           HF+  KASNG  CLRL++WR+EFAVSALQRSNES E+G+ Y++FK+G+TTLAFP  F  G
Sbjct: 195 HFQFFKASNGFGCLRLVQWRDEFAVSALQRSNESKEMGNEYQKFKKGQTTLAFPMSFPRG 254

Query: 249 IWGTK------EEFQKLPYISPYESCRQIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNY 308
               K      EEFQKLPYISPYE  RQIDPNS+LMEKRVVGVLHELLSLT+HKKTKRNY
Sbjct: 255 YGAQKKVRAWMEEFQKLPYISPYEDSRQIDPNSELMEKRVVGVLHELLSLTIHKKTKRNY 314

Query: 309 LRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKF 368
           LRSLREE+ LPHKFTR+FTRYPGIFYLSLKCKTTTV+LREGYQRGKLVNPHPL RLR+KF
Sbjct: 315 LRSLREEMILPHKFTRLFTRYPGIFYLSLKCKTTTVALREGYQRGKLVNPHPLARLRDKF 374

Query: 369 YHVMKTGLFYRGKGAALIEKEGILLNNTAEETVENGLDVESDET 400
           ++VM+TGL YR KGA +I  E ILLN+  +E   +  + E  ET
Sbjct: 375 HYVMRTGLLYRNKGANMI-PEDILLNDAEDEIGTDESEEEEGET 416

The following BLAST results are available for this feature:

BLAST of Carg25733 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928600.1	5.3e-223	96.05	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]	[more]
XP_023543563.1	5.9e-222	95.06	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_023543562.1	1.0e-221	94.81	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022928751.1	2.2e-221	95.56	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]	[more]
XP_022967804.1	1.4e-215	92.59	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]	[more]

BLAST of Carg25733 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58520.1	1.0e-151	67.47	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	2.7e-67	39.00	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G71850.1	1.9e-49	32.74	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G39120.1	9.8e-46	33.43	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	1.8e-44	34.46	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of Carg25733 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q65XL5\|WTF1_ORYSJ	2.7e-37	30.21	Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|B6TTV8\|WTF1_MAIZE	4.8e-34	29.88	Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1	[more]
sp\|A0MFS5\|WTF1_ARATH	4.5e-32	27.53	Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g0103...	[more]
sp\|Q689D6\|RPD1_ARATH	3.7e-26	32.74	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of Carg25733 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3X3\|A0A1S3C3X3_CUCME	7.1e-192	83.66	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496725 PE=4...	[more]
tr\|A0A0A0KM36\|A0A0A0KM36_CUCSA	2.7e-191	83.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218860 PE=4 SV=1	[more]
tr\|M5VU13\|M5VU13_PRUPE	1.1e-165	74.75	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G084500 PE=4 SV=1	[more]
tr\|B9SYU8\|B9SYU8_RICCO	1.5e-165	75.92	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0041300 PE=4 SV=1	[more]
tr\|A0A067JGI0\|A0A067JGI0_JATCU	1.5e-165	73.76	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_03036 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25733-RA	Carg25733-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 37..362 e-value: 2.0E-105 score: 352.3
None	No IPR available	PANTHER	PTHR31476:SF10	SUBFAMILY NOT NAMED	coord: 22..395
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 22..395

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25733	CmaCh03G001140	Cucurbita maxima (Rimu)	carcmaB1189
Carg25733	CmoCh03G001240	Cucurbita moschata (Rifu)	carcmoB1158
Carg25733	Bhi03G002241	Wax gourd	carwgoB1000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25733	Silver-seed gourd	carcarB320
Carg25733	Cucumber (Gy14) v2	carcgybB0848
Carg25733	Cucumber (Gy14) v1	carcgyB0979
Carg25733	Cucurbita moschata (Rifu)	carcmoB1159
Carg25733	Cucurbita pepo (Zucchini)	carcpeB1196
Carg25733	Cucurbita pepo (Zucchini)	carcpeB1197
Carg25733	Wild cucumber (PI 183967)	carcpiB0894
Carg25733	Cucumber (Chinese Long) v2	carcuB0874
Carg25733	Cucumber (Chinese Long) v3	carcucB0898
Carg25733	Bottle gourd (USVL1VR-Ls)	carlsiB781
Carg25733	Melon (DHL92) v3.5.1	carmeB0847
Carg25733	Melon (DHL92) v3.6.1	carmedB0858
Carg25733	Watermelon (Charleston Gray)	carwcgB0832
Carg25733	Watermelon (97103) v1	carwmB0859
Carg25733	Watermelon (97103) v2	carwmbB0896
Carg25733	Wax gourd	carwgoB1001