Carg25677 (gene) Silver-seed gourd

Overview
NameCarg25677
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger CCCH domain-containing protein 53 isoform X2
LocationCucurbita_argyrosperma_scaffold_291 : 79239 .. 82428 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTATCTCTCTCGGGGGATTGTTTTTTGATTCAAAGGAGAGAGAAAGTTAGAGAGAGAAAGCTCTGATTGAAAAAAATGGCAGACTAGTAGCAGCAGCAGCAGCGAAGTTGCAGGTTTTTTTTTTGAAACAAACCCAAATCATGGCTATCTTCTTCTTCCGACGTTGAAAACCCAGTTCATCTAAAGGCGGTGGTTTGGCTTTTATGGTAAAACTTTGACCTTATCTCTTTAGAAATCTTCATGAACTACTGAAAGATTTCATCTTGTTCTTGTTGTTCTTGTTCTTGCTCTGTTTGTATTTTTCTTTCTTTTGGGTGTTTTCCCTTTAACGAAGGCAAGCTCTGTTCTGTTCTTTTCTTTTCTTTTCTTTTCATCTAACGCACACGGGAATACTTCTTGGGGCACCAAACTTTCTCTTTTTGCTCTTCTTTTTTCTCTCAACGTTCCCTTTTCTTTACCTCTTTTTTGGGCATGTTCTTTCAGGGAGAAGCTTTTCAGAAAAAACAGAGACTGAACTGAAGCTACGCGATATTTGTTTGTGGGTGTGATCCTGTTTTTTTGTATCTCTGTTTTTTTCCCTCTCGCATCATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGGTATAATTTCTTCTTTTCGTGAAGAATGCCATGTAATTACTACTGAAAAGTCTCATTTCTAAACTCCTCTGTTTGCAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGGTTTCTTCACTAACCAAATTATCCATTTTGTTCTTCTTATACTTCCATGTCTGAAAGTTCTTGTTTTTGATGAAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGTACAGGCACTCTCTGTTCTTTACTCTGTTTTTGCTCTGTTTTTTCACTCTGTTTTTACTCTGTTTCTTTGGGATTTTTCGTAAGAATTTTGATTTGTTCTACAGGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGGTGAGGTTCATAATCAATCACCATTGATGAATCAATCTCTTATCAGCTTATGTAACTGAACTTTGTTTGCAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGGTAATAACAATAAACCATTTACATTACTCCAATTTAGACATCCCAATTCATTACTCAGATTATGTGTTATAAAACGACCATTACAGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTCAGCACTAAACCAACCAACCAAACAACCAAACAAACAATCAACACCTTAGAGTACTCTCACAATCCATTAAACTAAACAACAATCACTCTACAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

mRNA sequence

CTCTATCTCTCTCGGGGGATTGTTTTTTGATTCAAAGGAGAGAGAAAGTTAGAGAGAGAAAGCTCTGATTGAAAAAAATGGCAGACTAGTAGCAGCAGCAGCAGCGAAGTTGCAGGTTTTTTTTTTGAAACAAACCCAAATCATGGCTATCTTCTTCTTCCGACGTTGAAAACCCAGTTCATCTAAAGGCGGTGGTTTGGCTTTTATGGGAGAAGCTTTTCAGAAAAAACAGAGACTGAACTGAAGCTACGCGATATTTGTTTGTGGGTGTGATCCTGTTTTTTTGTATCTCTGTTTTTTTCCCTCTCGCATCATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

Coding sequence (CDS)

ATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

Protein sequence

MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKDLGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Homology
[Close]
BLAST of Carg25677 vs. NCBI nr
Match: XP_022941629.1 (zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 676/695 (97.27%), Postives = 677/695 (97.41%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE
Sbjct: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFL                IMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]
BLAST of Carg25677 vs. NCBI nr
Match: XP_022941628.1 (zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 676/697 (96.99%), Postives = 677/697 (97.13%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE
Sbjct: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFL                IMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]
BLAST of Carg25677 vs. NCBI nr
Match: XP_022988489.1 (zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1232.2 bits (3187), Expect = 0.0e+00
Identity = 663/695 (95.40%), Postives = 668/695 (96.12%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGLPSTNS    XXXXXXXXXXXXXXXXXXXXXX                VSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMXXXXXXXXXXXXXXXXXXXXXXINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]
BLAST of Carg25677 vs. NCBI nr
Match: XP_022988464.1 (zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima] >XP_022988473.1 zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima] >XP_022988482.1 zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 663/697 (95.12%), Postives = 668/697 (95.84%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGLPSTNS    XXXXXXXXXXXXXXXXXXXXXX                VSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMXXXXXXXXXXXXXXXXXXXXXXINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]
BLAST of Carg25677 vs. NCBI nr
Match: XP_023525543.1 (zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 672/697 (96.41%), Postives = 674/697 (96.70%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE
Sbjct: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFL-XXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIV 360
           ANAFPYSPKSINFL XXXXXXXXXXXXXXXX MGEDLHKFSRSGRLERNEFSLNGSAGI+
Sbjct: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXXXMGEDLHKFSRSGRLERNEFSLNGSAGII 360

Query: 361 NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL 420
           NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL
Sbjct: 361 NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL 420

Query: 421 AKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRM 480
           AKGNPHFVCDARVLVKPYKEKGKVPDKK QQIDRDFSPCGTPTGLDSRELYDHLQLGSRM
Sbjct: 421 AKGNPHFVCDARVLVKPYKEKGKVPDKKLQQIDRDFSPCGTPTGLDSRELYDHLQLGSRM 480

Query: 481 FYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSP 540
           FYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSP
Sbjct: 481 FYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSP 540

Query: 541 THSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV- 600
           THSPNPFAQNLIFPTIRSASSCSNSDILRENGPTP PVTIVSSTDMPRQLSP ANEFSV 
Sbjct: 541 THSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPLPVTIVSSTDMPRQLSPSANEFSVI 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT GEHAANDS               SLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GEHAANDS-----XXXXXXXXXXSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 691

[Close]
BLAST of Carg25677 vs. TAIR10
Match: AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 387.5 bits (994), Expect = 1.7e-107
Identity = 293/708 (41.38%), Postives = 366/708 (51.69%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQ+LDPENASKIMG LL+QDHGEKEMIRLAFGPE L+HSVI+K +K+
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGL + +                                                  SP 
Sbjct: 61  LGLMNCSRSPWSHQDEL---------------------------------------ISP- 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
            +N+    ++P +LP     ++ G     D+ ++F+L D ++           +++D   
Sbjct: 121 -KNNRGSSLNPASLPF----YANGGRSSRDLTNDFELMDDMN----------SRSTDFLG 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                S S    G G YGGD                         + G G  PC Y+ARG
Sbjct: 181 SVHARSGSCVLDGLG-YGGDS------------------------DLGFGGVPCSYFARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNG SCRF+HS     DGG   VGSPS+IE++          +S   RL  A   M  
Sbjct: 241 FCKNGASCRFVHS-----DGGADLVGSPSRIELL--------RSNSVPPRL--AHHFMTR 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ++   +S K +N                  ++G++L K  R  R ER + S      +  
Sbjct: 301 SSLPSFSTKGVNL-----QQNDVQRAAAALMIGDELQKLGR-WRPERIDLS-----AMAC 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILA
Sbjct: 361 PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLG 480
           KGNPHFVCD+RVLVKPYKEKGKVPDK    Q  +R+ S    PTGLDS  R++     LG
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERELS----PTGLDSSPRDV-----LG 480

Query: 481 SRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSP 540
            R FYN+ QD+L R K E++   ++LQSRRL+NLQLLDVKK+ QL  P N          
Sbjct: 481 GRGFYNNTQDVLWRSKFEEE--ILELQSRRLMNLQLLDVKKHFQLNSPTN---------- 540

Query: 541 IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANE 600
                HSPNPF+Q+LI                     +P P++++      ++      +
Sbjct: 541 ----IHSPNPFSQSLI---------------------SPRPLSVI------KREYDGGEK 540

Query: 601 FSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTS 660
                KE S +D ++L E  E +LPDSPFASPA      H    +D AD N  S+L S S
Sbjct: 601 GKGSSKEGSDDDTMNLPERLEDSLPDSPFASPA-----HHLLLFADSAD-NNGSDLWSPS 540

Query: 661 S--------LEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           S                    QMPR P    +IGM  G GGPTC VGI
Sbjct: 661 SXXXXXXXXXXXXXXXXXXXXQMPRLP----AIGMLPGRGGPTCRVGI 540

[Close]
BLAST of Carg25677 vs. TAIR10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain)

HSP 1 Score: 335.9 bits (860), Expect = 6.0e-92
Identity = 259/703 (36.84%), Postives = 364/703 (51.78%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LG+ S NS                                           S + GF   
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGS-------------------SHSNGFMDF 120

Query: 121 LQNSDDHL---------------------ISPGNLPL----------GSSCFSAGEAPV- 180
            +NS                         ISP + P+          G S   +G A   
Sbjct: 121 RRNSPXXXXXXXXXXXXXXXXXXXXXXPHISPKHTPISKPFSSHQSNGLSATHSGSADAA 180

Query: 181 --TDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGG 240
              D++D+ QL D LSFL++       K  DL  P + L  S  G G             
Sbjct: 181 GGADLLDDQQLNDCLSFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH---------- 240

Query: 241 VVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAV 300
            +HRRS+S  DAS  + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G   
Sbjct: 241 -LHRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVA 300

Query: 301 GSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINFLXXXXXXXXXXX 360
            SP K+E   + HE       A Q+   ASQ++  A   PY  K ++FL           
Sbjct: 301 DSPRKMENFVRQHEEMMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQHAQRDGGL 360

Query: 361 XXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYF 420
                  G++    S  GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YF
Sbjct: 361 P-----FGDERFWSSSPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYF 420

Query: 421 SMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPD 480
           S++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV D
Sbjct: 421 SLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLD 480

Query: 481 KK-----QQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD 540
           KK     QQQI+R ++SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD
Sbjct: 481 KKQQQLLQQQIERGNYSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QAD 540

Query: 541 ----IDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPT 600
               I+L+ RR +NLQL + K +      NHHR+FS GSP   S   + +P  Q+     
Sbjct: 541 LLRAIELERRRFINLQLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----E 600

Query: 601 IRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLL 656
           +  A +   +D   E  P P    +V+   +    S  A E      ET++++  D D  
Sbjct: 601 LNGADALKVTDDTLELHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSG 635

[Close]
BLAST of Carg25677 vs. TAIR10
Match: AT3G21100.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 305.4 bits (781), Expect = 8.7e-83
Identity = 243/682 (35.63%), Postives = 340/682 (49.85%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD  + T I+F++I+ L+P+ ASKI+G+LL+QD G+ +++RLA GPE LL SV LK +  
Sbjct: 1   MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGL S  S                                           S+AT   P 
Sbjct: 61  LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSP------SFAT---PG 120

Query: 121 LQNSDDHLI-----SPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKN 180
              S+ ++I                           +DE QL + LSFLNE S     KN
Sbjct: 121 SLGSNPNMIXXXXXXXXXXXXXXXXXXXXXXXXXXFLDEQQLGNYLSFLNESSS----KN 180

Query: 181 SDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCL 240
           +D    P          GF +  GD       +H+RS+S +DA  G+E+   G       
Sbjct: 181 NDESLDPF---------GFSADNGDAH-----LHKRSFSASDACFGSEEPGFG------- 240

Query: 241 YYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAAS 300
                    G   RFLH GLGD        GSP  +    Q  E+ R K + +QR+AAA 
Sbjct: 241 --------GGGYNRFLHGGLGDDFDSPGGFGSPDYVSR--QQEEIVRMKMAQRQRMAAAQ 300

Query: 301 QLMASANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGS 360
            L A+ +   Y  K +NFL                  GE+ + F   GR ER+EF   G 
Sbjct: 301 YLAATGSPMSYE-KGLNFLLHQRNAHRSGAGQ----FGEEGYWFGSPGRHERDEFM--GM 360

Query: 361 AGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETV 420
               N AS+QIYLTFPADS+F +EDVSNYF  +GPVQDVRIPYQQKRMFGFVTF++ ETV
Sbjct: 361 GDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETV 420

Query: 421 KLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQ-----QQIDR-DFSPCGTPTGLDSREL 480
           ++ILA+GNPHF+CD+RVLVKPYKEKG++ +K+Q     QQ++R +FSP  +P+G+DSR+L
Sbjct: 421 RIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDSRDL 480

Query: 481 YDHLQLGSRMFYNSQQDLLLRRKLEKQ--QADIDLQSRRLLNLQLLDVKKNQLPHPYNHH 540
           +D   L  RMF N+Q+  ++RRK E+   Q  I+ Q RR L+LQL D+      H   H 
Sbjct: 481 FDS-HLAPRMFSNTQE--MMRRKAEQADLQQAIEFQRRRFLSLQLPDMDSESFLH---HQ 540

Query: 541 RAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPT--PPPVTIVSSTDM 600
           R+ S GSP+    H      Q+++F      S  ++ ++   NG +      T    +D 
Sbjct: 541 RSLSIGSPV----HFSPRVNQSMLF-----RSESTSDEVFEGNGDSGHQSEATRAFLSDT 600

Query: 601 PRQLSPPA--NEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDA 660
              +S     N      +ETS           E+ LPDS FASP+K    +H   + ++ 
Sbjct: 601 GHNISQERGYNSHLNKGQETS----------LENTLPDSFFASPSKTGETQHPEFEKENC 601

Query: 661 DANPESNLTSTSSLEVAASFKS 666
                + ++ T+  + A+S +S
Sbjct: 661 -----ATISVTTENKAASSLQS 601

[Close]
BLAST of Carg25677 vs. TAIR10
Match: AT3G63450.3 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-59
Identity = 231/707 (32.67%), Postives = 277/707 (39.18%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQNLDP NASKI+G LL+QDHGEKEMIRLAFGP+ LLHSVI K +KD
Sbjct: 1   MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
                                               L+++LSFL   +            
Sbjct: 121 ------------------------------------LEERLSFLTPRT------------ 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                                                     ED  S LG+         
Sbjct: 181 -----------------------------------------AEDFESDLGF--------- 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
                        G G                      E+ RS S          +L   
Sbjct: 241 -------------GWGHR-------------------KEVLRSNS-------VPPRLANQ 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
              +P+SPK +N                  +MG+DLHK     R ER + S         
Sbjct: 301 FTGYPFSPKGVNL------QQSEAQRAAALMMGDDLHKLG-IWRPERIDLSATAC----- 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVS+YFS +GPVQDVRIPYQQKRMFGFVTF+YPETVK ILA
Sbjct: 361 PASRQIYLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILA 406

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVC +RVLVKPYKEKGKVPDK + +  RD                   QLG R F
Sbjct: 421 KGNPHFVCHSRVLVKPYKEKGKVPDKYRTKPSRDIM---------------DFQLGGRAF 406

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSPIPSP 540
           +   +DLL +R+ E++   ++LQS RL+NLQLLDV+K  QL                   
Sbjct: 481 H---EDLLWKRRFEERA--LELQSTRLMNLQLLDVEKQFQL------------------- 406

Query: 541 THSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVH 600
                 F Q L+                                  PR +S   N   V 
Sbjct: 541 -----NFDQTLLV--------------------------------SPRLVS---NNQRVC 406

Query: 601 DKETSQNDDIDLLECFEHN-LPDSPFASP---------AKATGGEHAANDSDDADANPES 660
            KE  + D I L E  E + L DSP  SP         A  T G   ++ S D D     
Sbjct: 601 TKENDE-DTIKLPESLEDDRLVDSPIVSPKHHFLECGVAAETKGSGLSSPSFDQDE---- 406

Query: 661 NLTSTSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGP-TCPVGI 696
             +ST +L+     KS  CQMPR       +G+  G+ GP TC VGI
Sbjct: 661 --SSTGTLK--EPLKSLKCQMPRL----SMMGITQGSSGPTTCRVGI 406

[Close]
BLAST of Carg25677 vs. TAIR10
Match: AT1G51520.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-51
Identity = 168/542 (31.00%), Postives = 248/542 (45.76%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD  + T I+FS+I+  + ENAS+++ + L+QD  ++++IR+AFGP++L+ +   K + D
Sbjct: 1   MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LG  S                                                  GFS  
Sbjct: 61  LGFSS-------------------------------------------------NGFSRP 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEA-PVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLF 180
           + N     +S  +   G   FS   + P++  +    L+D     N  SP          
Sbjct: 121 I-NIHGQSLSSSSPRNGFLEFSRNPSNPLSSSLTLNTLRDNKPNFN-SSPFRESXXXXXX 180

Query: 181 FPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYAR 240
                               +  ++    H+RS+S NDA   +E+   G           
Sbjct: 181 XXXXXXXXXXXXXXXLFTNDEDPFANS--HKRSFSANDACFESEEPWFG----------- 240

Query: 241 GFCKNGTSC-RFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLM 300
                G  C +F   GL D  G     GSPS+++ M     + R K + Q+ + AA  + 
Sbjct: 241 ----GGNGCHQFPQGGLVDGFGSSGVFGSPSEMDYM--LEGMMRMKLAQQKSMVAAQFMA 300

Query: 301 ASANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGI 360
           A  +   +   S +F                   GE+   +   GR ER +         
Sbjct: 301 ACGSPMLHRHGSGHF-------------------GEECGNYFSQGRHERED--------- 360

Query: 361 VNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLI 420
               S+QIYLTFP++S+F +EDVS YF  +G V DVRIPYQQ+RM+GFVTF   ETV+ I
Sbjct: 361 --SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTI 420

Query: 421 LAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQ-----IDR-DFSPCGTPTGLDSRELYDH 480
           LA+GNPHF+CD+RVLVKPYKEKGK+  K+QQQ     ++R ++SP  +P+G DSRELY+ 
Sbjct: 421 LARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGKDSRELYE- 434

Query: 481 LQLGSRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSP 535
            +LG RMF    Q+ +LRRK E  QAD+     R  ++       +  P  +NH   F  
Sbjct: 481 CRLGPRMFSKKTQE-MLRRKTE--QADLQHAIERSPSIG----SPSHFPPRFNHSLLFQS 434

[Close]
BLAST of Carg25677 vs. Swiss-Prot
Match: sp|Q0D3J9|C3H53_ORYSJ (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.5e-124
Identity = 337/741 (45.48%), Postives = 408/741 (55.06%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMGFLLIQDHGEKEMIRLAFGPEALLH+V+ K RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60

Query: 61  LGL-----PSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---- 120
           LGL     P T +                                          V    
Sbjct: 61  LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120

Query: 121 -SWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPT 180
            S + G   E+    D LISP N     S F  G+     ++DE QLQDQL+FLNEG   
Sbjct: 121 NSISNGAGEEMVGLGDELISPANGGGPPSPFFGGD----PLMDELQLQDQLAFLNEGGVP 180

Query: 181 IGVKNSDLFFPPVDLSS--SPTGGGFGSYGGDGTW-SGGVVHRRSYSVNDASLGTEDLNS 240
            G +      P  D     SP GG  G +  +  W +GG  HRRS SV++  LG  D   
Sbjct: 181 AGHQ-----MPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD--- 240

Query: 241 GLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFRSKSS 300
           GLGWKPCLYYARG+CKNG++CRF+H GL D D  G     PS +E   QC + L RSKS 
Sbjct: 241 GLGWKPCLYYARGYCKNGSACRFVHGGLPD-DAAGKM--DPSAVE--QQCQDFLIRSKS- 300

Query: 301 AQQRLAAASQLMASANAFPYSPKSIN--------FLXXXXXXXXXXXXXXXXIMGEDLHK 360
             QRLAAA+   +   + P SP +            XXXXXXXXXXXXXXXX    + HK
Sbjct: 301 --QRLAAAAFPYSPTGSLPGSPSAATKCLSXXXXXXXXXXXXXXXXXXXXXXXXXXEAHK 360

Query: 361 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 420
           F    RLER +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 361 FMGRPRLERADF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 420

Query: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDR--D 480
           QQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK  KQ Q     D
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPGERVD 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRR 540
           FS C TPTGLD+R+ +D  QLG+RM    NS  ++LLRRKLE+Q      Q  I+L SRR
Sbjct: 481 FSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRR 540

Query: 541 LLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDI 600
           L+ LQLLD K                     +PT   NPF+ +         S   + ++
Sbjct: 541 LMGLQLLDFKSR----------------AAAAPTPIGNPFSASQTAANATGESPPDSGEL 600

Query: 601 LRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFAS 660
            + +G        V+  D                + +S N D D  +  EHNLPDSPFAS
Sbjct: 601 GKGSGFLLAHKKAVNGADKEESTG----------ESSSPNTDSD--QSVEHNLPDSPFAS 660

Query: 661 PAKATGGEHAANDSDDADANPESNLTSTSSLEVAASF----------------------- 683
           P K+ G       + D  A  E+ +++T+S   +A++                       
Sbjct: 661 PTKSAG------FARDPFAPTEAEISATASTGCSATYVGINNGASNGGTNHLLPSALDMP 682

[Close]
BLAST of Carg25677 vs. Swiss-Prot
Match: sp|Q10M00|C3H22_ORYSJ (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0328900 PE=2 SV=2)

HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-113
Identity = 337/729 (46.23%), Postives = 418/729 (57.34%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LG-----LPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWAT 120
           L            XXXX               XXXXXXXXXXXXXXXXXXXXXX  S + 
Sbjct: 61  LAXXXXXXXXXXXXXXXPAAHSPFLLSRQNSGXXXXXXXXXXXXXXXXXXXXXXPFSRSN 120

Query: 121 GFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTD--MIDEFQLQDQLSFLNEGS----- 180
           G   E+  + + LISP N   G++  +    P     ++D+FQLQ+QL+FLNEG      
Sbjct: 121 GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEGGVNPSH 180

Query: 181 PTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSG 240
           P  G   ++   P         GGG   Y G G  +GG  HRRS SVN+  LG    + G
Sbjct: 181 PLQGFDGAECRSP-----GPGEGGGMFPY-GLGWANGGPGHRRSASVNELCLGGGS-SDG 240

Query: 241 LGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFRSKSSA 300
            GWKPCLYYARGFCKNG+SCRF+H     A  G A   + ++     QC + L RSKS  
Sbjct: 241 FGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAE---QQQCQDFLLRSKS-- 300

Query: 301 QQRLAAASQLMASANAFPYSPKSIN-------FLXXXXXXXXXXXXXXXXIMGEDLHKFS 360
            QRL  A+   +   + P SP +           XXXXXXXXXXXXXXXX    + HKF 
Sbjct: 301 -QRLGPAAFPYSPTGSLPGSPSAATKCLSXXXXXXXXXXXXXXXXXXXXXXXXXEAHKFM 360

Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
              RL+R +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPYQQ
Sbjct: 361 GRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQ 420

Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGT 480
           KRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++    DFS C T
Sbjct: 421 KRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKH-QGDFSGCTT 480

Query: 481 PTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRLLNLQL 540
           PTGLD R+ +D  QLG+RM    NS  +++LRRKLE+       Q  I+L SRRL++LQL
Sbjct: 481 PTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEXXXAAELQQAIELHSRRLMDLQL 540

Query: 541 LDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGP 600
           LD+K            A +   P  +   S  P A  ++     S      +    E   
Sbjct: 541 LDLKNRAAAAVTT---AMAMTIPTANAFGSSQPLATTMVESPPDSGEQLKGTGYFTEE-- 600

Query: 601 TPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATG 660
                         R++     +      E S N D D  +  EHNLPDSPFASP K++ 
Sbjct: 601 --------------RKMVNGGGDKEESAGEASLNADSD--QSLEHNLPDSPFASPTKSSV 660

Query: 661 GEHAANDSDDADANPESNLTST-------------------SSLEVAASFKSYNCQMPRF 683
             H +  + D      S+ +++                   S+L++  S + +     R 
Sbjct: 661 SAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPSTLDI-PSPRDFFSVSSRL 688

[Close]
BLAST of Carg25677 vs. Swiss-Prot
Match: sp|Q10LZ9|C3H23_ORYSJ (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-113
Identity = 314/721 (43.55%), Postives = 395/721 (54.79%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LG-LPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSP 120
           L  LP   +                                               G + 
Sbjct: 61  LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAAD 120

Query: 121 ELQNSDDHLISPGNLPLGSSCFSAGEAP--VTDMIDEFQLQDQLSFLNEGSPTIGVKNSD 180
           E+  + + L+SP N             P     ++D+F+LQ+QL+FL++G+  +   ++ 
Sbjct: 121 EMVGAGEELMSPLNXXXXXXXXXXXFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHAL 180

Query: 181 LFFPPVDLSSSPTG--GGFGSYGGDGTW-SGGVVHRRSYSVNDASLGTEDLNSGLGWKPC 240
             F   +  S   G  GG   YG    W +GG  HRRS SVN+  LG      G GWKPC
Sbjct: 181 QAFDGAECRSPGPGESGGMLPYG--LAWANGGPGHRRSASVNELCLG----GDGFGWKPC 240

Query: 241 LYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFRSKSSAQQRLAA 300
           LYYARGFCKNG++CRF+H GL D     A            QC + L RSKS   QRL  
Sbjct: 241 LYYARGFCKNGSTCRFVHGGLSDDAAMDATTAE------QQQCQDFLLRSKS---QRLGP 300

Query: 301 ASQLMASANAFPYSPKSIN--------FLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRL 360
           A+       + P SP + +          XXXXXXXXXXXXXXXX      HKF    RL
Sbjct: 301 AAFPFTPTGSLPASPSATSKCLSXXXXXXXXXXXXXXXXXXXXXXXXXXXAHKFMGRPRL 360

Query: 361 ERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFG 420
           +R +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPYQQKRMFG
Sbjct: 361 DRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 420

Query: 421 FVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLD 480
           FVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++Q   DF  C +PTGLD
Sbjct: 421 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFC-CMSPTGLD 480

Query: 481 SRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRLLNLQLLDVKK 540
           +R+ +D  QLG+RM    NS  +L+LRRKLE+Q      Q  IDL SRRL+ LQLLD+K 
Sbjct: 481 ARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKS 540

Query: 541 NQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPV 600
           +   H         P +PI +   S  P A  ++       S  S++  L  +  +P   
Sbjct: 541 SAAVHAAETTTMSLP-TPITNAFTSGQPGATTIV------ESPPSSTGQLMASCGSPSEG 600

Query: 601 TIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAA 660
            +V+  +                 E ++N D D  +  EHNLPDSPFAS  K+T    A 
Sbjct: 601 KVVNGGNKADSAG-----------EVTRNADSD--QSGEHNLPDSPFASSTKSTAFFTA- 660

Query: 661 NDSDDADANPESNLTSTSSLEVAASF---------KSYNCQMPR---FP----SSHGSIG 683
             +       E + T+ SS  +  S           + +   PR   FP    S HG+IG
Sbjct: 661 --TAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSEHGAIG 677

[Close]
BLAST of Carg25677 vs. Swiss-Prot
Match: sp|Q9SV09|C3H46_ARATH (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=At3g51950 PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.1e-106
Identity = 293/708 (41.38%), Postives = 366/708 (51.69%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQ+LDPENASKIMG LL+QDHGEKEMIRLAFGPE L+HSVI+K +K+
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LGL + +                                                  SP 
Sbjct: 61  LGLMNCSRSPWSHQDEL---------------------------------------ISP- 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
            +N+    ++P +LP     ++ G     D+ ++F+L D ++           +++D   
Sbjct: 121 -KNNRGSSLNPASLPF----YANGGRSSRDLTNDFELMDDMN----------SRSTDFLG 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                S S    G G YGGD                         + G G  PC Y+ARG
Sbjct: 181 SVHARSGSCVLDGLG-YGGDS------------------------DLGFGGVPCSYFARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNG SCRF+HS     DGG   VGSPS+IE++          +S   RL  A   M  
Sbjct: 241 FCKNGASCRFVHS-----DGGADLVGSPSRIELL--------RSNSVPPRL--AHHFMTR 300

Query: 301 ANAFPYSPKSINFLXXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ++   +S K +N                  ++G++L K  R  R ER + S      +  
Sbjct: 301 SSLPSFSTKGVNL-----QQNDVQRAAAALMIGDELQKLGR-WRPERIDLS-----AMAC 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILA
Sbjct: 361 PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLG 480
           KGNPHFVCD+RVLVKPYKEKGKVPDK    Q  +R+ S    PTGLDS  R++     LG
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERELS----PTGLDSSPRDV-----LG 480

Query: 481 SRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSP 540
            R FYN+ QD+L R K E++   ++LQSRRL+NLQLLDVKK+ QL  P N          
Sbjct: 481 GRGFYNNTQDVLWRSKFEEE--ILELQSRRLMNLQLLDVKKHFQLNSPTN---------- 540

Query: 541 IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANE 600
                HSPNPF+Q+LI                     +P P++++      ++      +
Sbjct: 541 ----IHSPNPFSQSLI---------------------SPRPLSVI------KREYDGGEK 540

Query: 601 FSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTS 660
                KE S +D ++L E  E +LPDSPFASPA      H    +D AD N  S+L S S
Sbjct: 601 GKGSSKEGSDDDTMNLPERLEDSLPDSPFASPA-----HHLLLFADSAD-NNGSDLWSPS 540

Query: 661 S--------LEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           S                    QMPR P    +IGM  G GGPTC VGI
Sbjct: 661 SXXXXXXXXXXXXXXXXXXXXQMPRLP----AIGMLPGRGGPTCRVGI 540

[Close]
BLAST of Carg25677 vs. Swiss-Prot
Match: sp|Q94CJ8|C3H55_ARATH (Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=At5g12440 PE=2 SV=3)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-90
Identity = 259/703 (36.84%), Postives = 364/703 (51.78%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSWATGFSPE 120
           LG+ S NS                                           S + GF   
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGS-------------------SHSNGFMDF 120

Query: 121 LQNSDDHL---------------------ISPGNLPL----------GSSCFSAGEAPV- 180
            +NS                         ISP + P+          G S   +G A   
Sbjct: 121 RRNSPXXXXXXXXXXXXXXXXXXXXXXPHISPKHTPISKPFSSHQSNGLSATHSGSADAA 180

Query: 181 --TDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGG 240
              D++D+ QL D LSFL++       K  DL  P + L  S  G G             
Sbjct: 181 GGADLLDDQQLNDCLSFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH---------- 240

Query: 241 VVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAV 300
            +HRRS+S  DAS  + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G   
Sbjct: 241 -LHRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVA 300

Query: 301 GSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINFLXXXXXXXXXXX 360
            SP K+E   + HE       A Q+   ASQ++  A   PY  K ++FL           
Sbjct: 301 DSPRKMENFVRQHEEMMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQHAQRDGGL 360

Query: 361 XXXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYF 420
                  G++    S  GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YF
Sbjct: 361 P-----FGDERFWSSSPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYF 420

Query: 421 SMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPD 480
           S++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV D
Sbjct: 421 SLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLD 480

Query: 481 KK-----QQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD 540
           KK     QQQI+R ++SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD
Sbjct: 481 KKQQQLLQQQIERGNYSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QAD 540

Query: 541 ----IDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPT 600
               I+L+ RR +NLQL + K +      NHHR+FS GSP   S   + +P  Q+     
Sbjct: 541 LLRAIELERRRFINLQLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----E 600

Query: 601 IRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLL 656
           +  A +   +D   E  P P    +V+   +    S  A E      ET++++  D D  
Sbjct: 601 LNGADALKVTDDTLELHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSG 635

[Close]
BLAST of Carg25677 vs. TrEMBL
Match: tr|A0A1S3BDP8|A0A1S3BDP8_CUCME (zinc finger CCCH domain-containing protein 53 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488758 PE=4 SV=1)

HSP 1 Score: 1028.5 bits (2658), Expect = 7.1e-297
Identity = 612/734 (83.38%), Postives = 636/734 (86.65%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK RKD
Sbjct: 1   MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKARKD 60

Query: 61  LGLPSTNS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120
           L LP+ NS         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV
Sbjct: 61  LNLPAVNSPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120

Query: 121 SWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTI 180
           SWA GFS +LQNSDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSPTI
Sbjct: 121 SWAAGFSSDLQNSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSPTI 180

Query: 181 GVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGW 240
           GVKNSDLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GLGW
Sbjct: 181 GVKNSDLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGLGW 240

Query: 241 KPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRL 300
           KPCLYYARGFCKNGTSCRFLH GLGD+D   AAVGSPSK++MM+QCHEL RSKSSAQQRL
Sbjct: 241 KPCLYYARGFCKNGTSCRFLHGGLGDSDASAAAVGSPSKMDMMEQCHELLRSKSSAQQRL 300

Query: 301 AAASQLMASANAFPYSPKSINFL---XXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERN 360
           AAASQLMASAN+FPYSPKSINFL   XXXXXXXXXXXXXXXX  GEDLHKFSRS RLERN
Sbjct: 301 AAASQLMASANSFPYSPKSINFLXXXXXXXXXXXXXXXXXXXXXGEDLHKFSRSSRLERN 360

Query: 361 EFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT 420
           EFS+NGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT
Sbjct: 361 EFSMNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT 420

Query: 421 FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRE 480
           FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRE
Sbjct: 421 FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRE 480

Query: 481 LYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQLPHPYN 540
           LYDHLQLGSRMFYN+ QDLL RRKLE+QQAD   +DLQSRRLLNLQLLDVKKNQLPH   
Sbjct: 481 LYDHLQLGSRMFYNTHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPH-XX 540

Query: 541 HHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILRENG----PTPPPVTIV 600
              A S GSPIPSPTHSPNP FAQNLIFP IRS+ S S SDILRENG     TPPPV+++
Sbjct: 541 XXXALSTGSPIPSPTHSPNPLFAQNLIFPGIRSSGSSSTSDILRENGVAPVRTPPPVSVM 600

Query: 601 -SSTDMPRQLSPPANEFSV------HDKETSQNDDIDLLECFEHNLPDSPFASPAKATG- 660
            +STDMPRQ SP  N          +DKE SQ DD DLLECFEHNLPDSPFASPAKATG 
Sbjct: 601 ATSTDMPRQASPVDNGALATIGQGGNDKERSQIDDSDLLECFEHNLPDSPFASPAKATGD 660

Query: 661 -----------GEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSHGSIG 696
                      GE AANDSDDA +   S LTSTSSLEVA SFKSYNCQ+PRFPS H  IG
Sbjct: 661 YATNFSDIAAVGE-AANDSDDASS---SILTSTSSLEVATSFKSYNCQIPRFPSGHSPIG 720

[Close]
BLAST of Carg25677 vs. TrEMBL
Match: tr|A0A1S4DWA4|A0A1S4DWA4_CUCME (zinc finger CCCH domain-containing protein 53 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488758 PE=4 SV=1)

HSP 1 Score: 1023.5 bits (2645), Expect = 2.3e-295
Identity = 612/736 (83.15%), Postives = 636/736 (86.41%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK RKD
Sbjct: 1   MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKARKD 60

Query: 61  LGLPSTNS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120
           L LP+ NS         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV
Sbjct: 61  LNLPAVNSPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120

Query: 121 SWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTI 180
           SWA GFS +LQNSDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSPTI
Sbjct: 121 SWAAGFSSDLQNSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSPTI 180

Query: 181 GVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGW 240
           GVKNSDLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GLGW
Sbjct: 181 GVKNSDLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGLGW 240

Query: 241 KPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRL 300
           KPCLYYARGFCKNGTSCRFLH GLGD+D   AAVGSPSK++MM+QCHEL RSKSSAQQRL
Sbjct: 241 KPCLYYARGFCKNGTSCRFLHGGLGDSDASAAAVGSPSKMDMMEQCHELLRSKSSAQQRL 300

Query: 301 AAASQLMASANAFPYSPKSINFL---XXXXXXXXXXXXXXXXIMGEDLHKFSRSGRLERN 360
           AAASQLMASAN+FPYSPKSINFL   XXXXXXXXXXXXXXXX  GEDLHKFSRS RLERN
Sbjct: 301 AAASQLMASANSFPYSPKSINFLXXXXXXXXXXXXXXXXXXXXXGEDLHKFSRSSRLERN 360

Query: 361 EFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT 420
           EFS+NGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT
Sbjct: 361 EFSMNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVT 420

Query: 421 FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS 480
           FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDS
Sbjct: 421 FVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDS 480

Query: 481 RELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQLPHP 540
           RELYDHLQLGSRMFYN+ QDLL RRKLE+QQAD   +DLQSRRLLNLQLLDVKKNQLPH 
Sbjct: 481 RELYDHLQLGSRMFYNTHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPH- 540

Query: 541 YNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILRENG----PTPPPVT 600
                A S GSPIPSPTHSPNP FAQNLIFP IRS+ S S SDILRENG     TPPPV+
Sbjct: 541 XXXXXALSTGSPIPSPTHSPNPLFAQNLIFPGIRSSGSSSTSDILRENGVAPVRTPPPVS 600

Query: 601 IV-SSTDMPRQLSPPANEFSV------HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT 660
           ++ +STDMPRQ SP  N          +DKE SQ DD DLLECFEHNLPDSPFASPAKAT
Sbjct: 601 VMATSTDMPRQASPVDNGALATIGQGGNDKERSQIDDSDLLECFEHNLPDSPFASPAKAT 660

Query: 661 G------------GEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSHGS 696
           G            GE AANDSDDA +   S LTSTSSLEVA SFKSYNCQ+PRFPS H  
Sbjct: 661 GDYATNFSDIAAVGE-AANDSDDASS---SILTSTSSLEVATSFKSYNCQIPRFPSGHSP 720

[Close]
BLAST of Carg25677 vs. TrEMBL
Match: tr|A0A0A0KPZ6|A0A0A0KPZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175810 PE=4 SV=1)

HSP 1 Score: 1022.3 bits (2642), Expect = 5.1e-295
Identity = 611/739 (82.68%), Postives = 638/739 (86.33%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK +KD
Sbjct: 1   MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60

Query: 61  LGLPSTNS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120
           L LP+ NS         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 61  LSLPAVNSPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 SWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTI 180
            WA GFS +LQ SDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSPTI
Sbjct: 121 XWAAGFSSDLQTSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSPTI 180

Query: 181 GVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGW 240
           GVKN+DLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GLGW
Sbjct: 181 GVKNADLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGLGW 240

Query: 241 KPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRL 300
           KPCLY+ARGFCKNGTSCRFLH GLGD+D   AAVGSPSKI++M+QCHEL RSKSSAQQRL
Sbjct: 241 KPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQCHELLRSKSSAQQRL 300

Query: 301 AAASQLMASANAFPYSPKSINFL------XXXXXXXXXXXXXXXXIMGEDLHKFSRSGRL 360
           AAASQLMASAN+FPYSPKSINFL      XXXXXXXXXXXXXXXX  GEDLHKFSRS RL
Sbjct: 301 AAASQLMASANSFPYSPKSINFLXXXXXXXXXXXXXXXXXXXXXXXXGEDLHKFSRSSRL 360

Query: 361 ERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFG 420
           ERNEFSLNGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFG
Sbjct: 361 ERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFG 420

Query: 421 FVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTG 480
           FVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTG
Sbjct: 421 FVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTG 480

Query: 481 LDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQL 540
           LDSRELYDHLQLGSRMFYNS QDLL RRKLE+QQAD   +DLQSRRLLNLQLLDVKKNQL
Sbjct: 481 LDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQL 540

Query: 541 PHPYNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILRENGP----TPP 600
           PH  +HHRA S GSPIPSPTHSPNP FAQNLIFP+IRS+ S S SDILRENG     TPP
Sbjct: 541 PH--HHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRSSGSNSTSDILRENGATPVRTPP 600

Query: 601 PVTIV-SSTDMPRQLSPPANEFSV------HDKETSQNDDIDLLECFEHNLPDSPFASPA 660
           PV+++ SSTDMPRQ SP  N  S       +DKE SQ DD DLLECFEHNLPDSPFASPA
Sbjct: 601 PVSVMASSTDMPRQPSPVDNGASATIGLNGNDKERSQIDDSDLLECFEHNLPDSPFASPA 660

Query: 661 KATG------------GEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSS 696
           KATG            GE AA DSDDA +   S LTSTSSLEVA SFKS+NCQ+PRFPS 
Sbjct: 661 KATGDYTTNFSDIAAVGE-AATDSDDASS---SILTSTSSLEVATSFKSFNCQIPRFPSG 720

[Close]
BLAST of Carg25677 vs. TrEMBL
Match: tr|A0A2P5AN77|A0A2P5AN77_9ROSA (Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_346160 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 2.8e-216
Identity = 479/758 (63.19%), Postives = 540/758 (71.24%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATR+VFSRIQN DPENASKIMG LLIQDHGEKEMIRLAFGPEAL+HSVILK RKD
Sbjct: 1   MDSYEATRVVFSRIQNFDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 60

Query: 61  LGLPSTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS-------- 120
           LGLPS NS XXXXXXXXXXX                              +S        
Sbjct: 61  LGLPS-NSPXXXXXXXXXXXFLSSNPITISRQNSTSSASRLSVNGAVNLPLSLTIPXXXX 120

Query: 121 ------WATGFSPELQNSDDHLISPGNLPLG---SSCFSAGEAPV-----TDMIDEFQLQ 180
                 WA  FS ELQ+ DD LISP  LP+G   SS  S+   P      TD++DEFQLQ
Sbjct: 121 XXXXXXWA-AFS-ELQSPDD-LISPNTLPIGSTSSSSLSSSSLPFYGNGGTDIMDEFQLQ 180

Query: 181 DQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWS--GGVVHRRSYSVN 240
           DQLSFLN+GSPT+G KN DLF+PP DLSSSPT       G    W+  GG+VHRRS SV+
Sbjct: 181 DQLSFLNDGSPTLGPKNPDLFYPPNDLSSSPT-------GDQAVWANWGGLVHRRSCSVS 240

Query: 241 DASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAA----------VG 300
           D  L +ED NSG GWKPCLYYARG+CKNGTSCRF+H GLGD     AA          VG
Sbjct: 241 DVCLNSEDPNSGFGWKPCLYYARGYCKNGTSCRFMHGGLGDPAAAAAASLVGSDGAPVVG 300

Query: 301 SPSKIEMMDQCHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINFLXXXXXXXXXXXX 360
           SPSK+EMMD CHEL RSKS+ QQRLAAASQLMASAN+FPYSPK +NFL   XXXXXXXXX
Sbjct: 301 SPSKLEMMDTCHELLRSKSAQQQRLAAASQLMASANSFPYSPKCMNFL-LQXXXXXXXXX 360

Query: 361 XXXXIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFS 420
           XXX +MGEDLHKF RS RLERN+FS+NG    VNPASRQIYLTFPADSTF+EEDVSNYFS
Sbjct: 361 XXXLMMGEDLHKFGRS-RLERNDFSMNG----VNPASRQIYLTFPADSTFREEDVSNYFS 420

Query: 421 MYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK 480
           +YGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKV DK
Sbjct: 421 IYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVQDK 480

Query: 481 KQQ--QIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADI 540
           KQQ  Q++R DFSPCGTPTGLDSR+ YD LQLG+RMFYNS QD+L RRKLE+Q   Q  I
Sbjct: 481 KQQQPQVERGDFSPCGTPTGLDSRDPYD-LQLGARMFYNS-QDMLWRRKLEEQAELQQAI 540

Query: 541 DLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASS 600
           +LQSRRL+ LQLLDVKK       +HHRA S GSPI SPT SPN F+QNL+  ++++A  
Sbjct: 541 ELQSRRLMGLQLLDVKK-------HHHRALSTGSPIQSPTQSPNLFSQNLVLSSVQNA-- 600

Query: 601 CSNSDILRENGPTPPPVTIVSSTDMP------RQLSPPANEFSVHDKETSQNDDIDLLEC 660
              S++  ENG T  P T  ++ D+P       + S  AN+ + +DKE+ +++  DLLE 
Sbjct: 601 ---SEVPHENGST--PTTNSTALDLPITGATNGKESTAANDENANDKESPRDEVGDLLES 660

Query: 661 FEHNLPDSPFASPAKATGGEHAA-----------NDSDDADANPESNLTST-----SSLE 696
            EHNLPDSPFASP K  G   AA           NDSD +      N +ST     S+L+
Sbjct: 661 LEHNLPDSPFASPTKGAGDYMAAFSTSMAAAAEVNDSDASATASNLNFSSTILPAASALD 720

[Close]
BLAST of Carg25677 vs. TrEMBL
Match: tr|A0A2N9IY66|A0A2N9IY66_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46496 PE=4 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 9.2e-212
Identity = 452/732 (61.75%), Postives = 517/732 (70.63%), Query Frame = 0 

Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEAL+HSVILK RKD
Sbjct: 1   MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 60

Query: 61  LGLPSTNS--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 120
           LGL ++NS        XXX                                        S
Sbjct: 61  LGLITSNSPXXXXXXXXXXPFLSNNSLRQNSSASSRLLGGINIPPPSLTIPNPSSASSAS 120

Query: 121 WATGFSPELQNSDDHLISPGNLPLGSSCFSAG-----------EAPVTDMIDEFQLQDQL 180
           WA     ELQ+ +D LISP NL LGSS  S              +  TD+IDEFQLQDQL
Sbjct: 121 WAA--LSELQSPED-LISPNNLALGSSSSSTAMNSSTTSIPFYGSGATDVIDEFQLQDQL 180

Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGG-----FGSYGGDGTWSGGVVHRRSYSVN 240
           SFLN+GSPT+G KN DL++P  DLSSSPTG G     F SY   GTW GG +HRRS SV+
Sbjct: 181 SFLNDGSPTLGHKNPDLYYPQSDLSSSPTGSGADPMLFPSY---GTW-GGSLHRRSCSVS 240

Query: 241 DASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQ 300
           D  LG+ED NSGLGWKPCLY+ARG+CKNGTSCRFLH GLG+   G A VGSPSKI+MMDQ
Sbjct: 241 DVCLGSEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGETVDGTAMVGSPSKIDMMDQ 300

Query: 301 CHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINF----LXXXXXXXXXXXXXXXXIM 360
           CHE+ RSKS+ QQRLAAASQLMAS  +FPYSPK +N      XXXXXXXXXXXXXXXX  
Sbjct: 301 CHEILRSKSAQQQRLAAASQLMAS-TSFPYSPKCMNIXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 GEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQ 420
           GEDLHKF RS RLERNEFS+NG AGIVNPASRQIYLTFPADSTF+EEDVSNYFS+YGPVQ
Sbjct: 361 GEDLHKFGRS-RLERNEFSMNGGAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 420

Query: 421 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-QQQI 480
           DVRIPYQQKRMFGFVTFVYP+TVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK QQQ+
Sbjct: 421 DVRIPYQQKRMFGFVTFVYPDTVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQV 480

Query: 481 DR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADIDLQSRRL 540
           +R +FSPCGTPTG+D+R+ +D LQLG+RMFYN+ QD+L RRKLE+Q   Q  ++LQSRRL
Sbjct: 481 ERGEFSPCGTPTGVDARDPFD-LQLGTRMFYNT-QDMLWRRKLEEQADLQQALELQSRRL 540

Query: 541 LNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDIL 600
           + LQLLD+KK       +HHRA S GSPIPSPT SPNPF+QN++    +S++     +I 
Sbjct: 541 MGLQLLDIKKQ------HHHRALSAGSPIPSPTQSPNPFSQNIVLAPFQSSTEVPEDNIS 600

Query: 601 RE-NGPTPPPVTIVSSTDMPRQLSPPAN-EFSVHDKETSQNDDIDLLECFEHNLPDSPFA 660
              + PT    T + +           N        ++  ++  DL EC EHNLPDSPFA
Sbjct: 601 SSASSPTDQQQTAMITVAGKELTENGENAXXXXXXXQSPSHEQSDLPECLEHNLPDSPFA 660

Query: 661 SPAKA--------TGGEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSH 690
           SP KA          G    N+  DA A+  +N  + S+L++ ASFKS+NCQMPRF S H
Sbjct: 661 SPTKAAADLMSAFANGTSETNNVPDASASATNNKLAASTLDM-ASFKSFNCQMPRFSSGH 714

The following BLAST results are available for this feature:
BLAST of Carg25677 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941629.10.0e+0097.27zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita moschat... [more]
XP_022941628.10.0e+0096.99zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita moschat... [more]
XP_022988489.10.0e+0095.40zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita maxima][more]
XP_022988464.10.0e+0095.12zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima]... [more]
XP_023525543.10.0e+0096.41zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita pepo su... [more]
BLAST of Carg25677 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51950.11.7e-10741.38Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... [more]
AT5G12440.16.0e-9236.84CCCH-type zinc fingerfamily protein with RNA-binding domain[more]
AT3G21100.28.7e-8335.63RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G63450.31.3e-5932.67RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G51520.21.8e-5131.00RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of Carg25677 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0D3J9|C3H53_ORYSJ1.5e-12445.48Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q10M00|C3H22_ORYSJ1.5e-11346.23Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q10LZ9|C3H23_ORYSJ1.5e-11343.55Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX... [more]
sp|Q9SV09|C3H46_ARATH3.1e-10641.38Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q94CJ8|C3H55_ARATH1.1e-9036.84Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Carg25677 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BDP8|A0A1S3BDP8_CUCME7.1e-29783.38zinc finger CCCH domain-containing protein 53 isoform X2 OS=Cucumis melo OX=3656... [more]
tr|A0A1S4DWA4|A0A1S4DWA4_CUCME2.3e-29583.15zinc finger CCCH domain-containing protein 53 isoform X1 OS=Cucumis melo OX=3656... [more]
tr|A0A0A0KPZ6|A0A0A0KPZ6_CUCSA5.1e-29582.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175810 PE=4 SV=1[more]
tr|A0A2P5AN77|A0A2P5AN77_9ROSA2.8e-21663.19Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_346160 P... [more]
tr|A0A2N9IY66|A0A2N9IY66_FAGSY9.2e-21261.75Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46496 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR036855Znf_CCCH_sf
IPR034365AtC3H46-like_RRM
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25677-RACarg25677-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 230..254
e-value: 0.0016
score: 27.7
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 233..253
e-value: 1.4E-4
score: 21.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 228..255
score: 12.943
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 365..435
e-value: 3.2E-8
score: 43.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 376..420
e-value: 1.3E-5
score: 24.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 364..440
score: 9.644
NoneNo IPR availableGENE3DG3DSA:4.10.1000.10coord: 229..291
e-value: 4.9E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..653
NoneNo IPR availablePANTHERPTHR24009FAMILY NOT NAMEDcoord: 1..680
NoneNo IPR availablePANTHERPTHR24009:SF3RNA-BINDING RRM/RBD/RNP MOTIFS FAMILY PROTEIN-RELATEDcoord: 1..680
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 314..453
e-value: 2.1E-10
score: 42.6
IPR034365AtC3H46-like, RNA recognition motifCDDcd12458RRM_AtC3H46_likecoord: 366..435
e-value: 6.9729E-39
score: 137.584
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 231..253
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 375..451