Carg25644 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25644
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WRKY transcription factor
Location	Cucurbita_argyrosperma_scaffold_317 : 19389 .. 20779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTCGGCTACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTCTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACCACTCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCAACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAGGAACGCCAAGACTTCCAAAGTGTAAGAGATCATTGTTACTGGTCTCGATCTGATTTTCACGATCATATAATACTATTTGTTTTAGATCTAACTTTCCGATTTACATCATATTGTTCATATTTTTTAAGAATTTGTTGATTATAATGAGGAAATTATGGATGTAATTAATGGGGTTTTGTTGATTTGATTTAGTTGACTAATTTTGAGCTTCATGTTTTTTTTTTTTTTTTTCAAAAAGAGATGAAAAAAGTGGAGATTTTTATTTATTTTTAATTAACTAATTAATTTATTATTATTATTATTATTATTTTACTGTTTTTGTTTTAGGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGGTTTGTCTTTTTCGTATATTTTTATAATGATATAATATAGTTTACTTCGAATTTTAAAATAAATGTGGTGTATTTTGTTTATAATATAGAAGCTATTATCGTTGCACGACGTCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGGATCCTATCGGAATCCACCAATTGCCTCGTTGCCGATCACGACGTTGTCACCACCGGAATTCTATTCCAACCCGGCCAACCCTTTATGTATAACCCTCCGCAACCGTTTCTAACAAACGACTCATCGTTCTTGAGTCCTCGTCCTCCTCCGTCTTCCCTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAGGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGAAAAATTCTCTTTTGATATGTTTAGAAATTCAGATCAGCCATTTTCCTTTGTTTTTTT

mRNA sequence

ATGGGGTCGGCTACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTCTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACCACTCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCAACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAGGAACGCCAAGACTTCCAAAGTGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGAAGCTATTATCGTTGCACGACGTCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGGATCCTATCGGAATCCACCAATTGCCTCGTTGCCGATCACGACGTTGTCACCACCGGAATTCTATTCCAACCCGGCCAACCCTTTATGTATAACCCTCCGCAACCGTTTCTAACAAACGACTCATCGTTCTTGAGTCCTCGTCCTCCTCCGTCTTCCCTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAGGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGAAAAATTCTCTTTTGATATGTTTAGAAATTCAGATCAGCCATTTTCCTTTGTTTTTTT

Coding sequence (CDS)

ATGGGGTCGGCTACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTCTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACCACTCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCAACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAGGAACGCCAAGACTTCCAAAGTGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGAAGCTATTATCGTTGCACGACGTCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGGATCCTATCGGAATCCACCAATTGCCTCGTTGCCGATCACGACGTTGTCACCACCGGAATTCTATTCCAACCCGGCCAACCCTTTATGTATAACCCTCCGCAACCGTTTCTAACAAACGACTCATCGTTCTTGAGTCCTCGTCCTCCTCCGTCTTCCCTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAGGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGA

Protein sequence

MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDFYNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAPTTPNSSSVSNSSSNEAAPIEEVDRNAKTSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTGILFQPGQPFMYNPPQPFLTNDSSFLSPRPPPSSLPPPSLSSRASLLQDNGLLQDLVPLQVRKEPKDEQNG

Homology

[Close]

BLAST of Carg25644 vs. NCBI nr
Match: XP_022942903.1 (probable WRKY transcription factor 48 [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122
Identity = 286/315 (90.79%), Postives = 286/315 (90.79%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF 60
           MGSATSTGIYSQTVFSDEF VGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF
Sbjct: 10  MGSATSTGIYSQTVFSDEFSVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF 69

Query: 61  YNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIEEV 120
           YNPSSMFDLLSTT PPLQPPLSSPSSTVPESSEVLNA XXXXXXXXXXXXXXXXX     
Sbjct: 70  YNPSSMFDLLSTTAPPLQPPLSSPSSTVPESSEVLNAPXXXXXXXXXXXXXXXXXXXXXX 129

Query: 121 DRNAKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR 180
                  XXXXXXXXXXXX   RFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR 189

Query: 181 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVT 240
           CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDV T
Sbjct: 190 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVAT 249

Query: 241 TGILFQ---PGQPFMYXXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL 300
           TGILFQ   PGQPFMY       TNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 250 TGILFQHNIPGQPFMYNPPQPFLTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL 309

Query: 301 VPLQVRKEPKDEQNG 313
           VPLQVRKEPKDEQNG
Sbjct: 310 VPLQVRKEPKDEQNG 324

[Close]

BLAST of Carg25644 vs. NCBI nr
Match: XP_023540261.1 (probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 284/315 (90.16%), Postives = 284/315 (90.16%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF 60
           MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASC SSSSFDLFGGGIGFHDF
Sbjct: 10  MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCCSSSSFDLFGGGIGFHDF 69

Query: 61  YNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIEEV 120
           YNPSSMFDLLSTT PPLQPPLSSPSSTVPESSEVLNA  XXXXXXXXXXXXXXXX     
Sbjct: 70  YNPSSMFDLLSTTAPPLQPPLSSPSSTVPESSEVLNA-PXXXXXXXXXXXXXXXXXXXXX 129

Query: 121 DRNAKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR 180
                  XXXXXXXXXXXX    FAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXXFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR 189

Query: 181 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVT 240
           CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDV T
Sbjct: 190 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVAT 249

Query: 241 TGILFQ---PGQPFMYXXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL 300
           TGILFQ   PGQPFMY       TNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 250 TGILFQHNVPGQPFMYNPLQPFLTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL 309

Query: 301 VPLQVRKEPKDEQNG 313
           VPLQVRKEPKDEQNG
Sbjct: 310 VPLQVRKEPKDEQNG 323

[Close]

BLAST of Carg25644 vs. NCBI nr
Match: XP_022972028.1 (probable WRKY transcription factor 48 [Cucurbita maxima])

HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 258/315 (81.90%), Postives = 260/315 (82.54%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF 60
           MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPC DDHKASC SSSSFDLFGGGIGFHDF
Sbjct: 10  MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPC-DDHKASCCSSSSFDLFGGGIGFHDF 69

Query: 61  YNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIEEV 120
           YNPSS+FDLLSTT PPLQPPLSSPSSTVPESSEVLNA   XXXXXXXXXXXXXXX     
Sbjct: 70  YNPSSIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPTXXXXXXXXXXXXXXXXXXXX 129

Query: 121 DRNAKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYR 180
                  XXXXXXXXXXXX  PRFAFMTKSDIDHLDDGYRWRKYGQK VKNSPYPRSYYR
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYR 189

Query: 181 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVT 240
           CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDV T
Sbjct: 190 CTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVAT 249

Query: 241 TGILFQ---PGQPFMYXXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXL 300
           TGILFQ   PGQPFMY       TN+SSFLSPRPPP                       L
Sbjct: 250 TGILFQHNIPGQPFMYNPPQPFLTNESSFLSPRPPPPSLSPPLLSSRASLLQDNGLLQDL 309

Query: 301 VPLQVRKEPKDEQNG 313
           VPLQVRKEPKDEQNG
Sbjct: 310 VPLQVRKEPKDEQNG 323

[Close]

BLAST of Carg25644 vs. NCBI nr
Match: XP_022979875.1 (probable WRKY transcription factor 48 isoform X1 [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 1.2e-69
Identity = 201/327 (61.47%), Postives = 218/327 (66.67%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGGSG-FSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHD 60
           MGS  S G YS  VFSDEFP    G + GVFD+PCDD   A+  SS+SFDL G GI   D
Sbjct: 10  MGSENSAGKYSPVVFSDEFPATSFGSYPGVFDMPCDDHKAAASCSSNSFDLLGSGI---D 69

Query: 61  FYNP-SSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIE 120
           FYNP SS+FDL+STT     P LSSP+STVPESSEV+NA                   IE
Sbjct: 70  FYNPLSSLFDLVSTTA----PLLSSPASTVPESSEVVNA-PPTPNSSSVSSYSNDAAAIE 129

Query: 121 EVD-----RNAKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSP 180
           EVD           XXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSP
Sbjct: 130 EVDXXXXXXXXXXXXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSP 189

Query: 181 YPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLV 240
           YPRSYYRCTT  CGVKKRVER S+D S V+TTYEGQHTHQSP++PRGSIR+L ES   + 
Sbjct: 190 YPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDVT 249

Query: 241 ADHDVVTTGILFQPGQP--FMY------XXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXX 300
           +     TTG+LFQP  P  FMY      XXXXXXX              XXXXXXXXXXX
Sbjct: 250 S-----TTGLLFQPNTPQSFMYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309

Query: 301 XXXXXXXXXXXLVPLQVRKEPKDEQNG 313
                      LVPLQ+RKEPKDEQNG
Sbjct: 310 FMLRDHGLLQDLVPLQMRKEPKDEQNG 323

[Close]

BLAST of Carg25644 vs. NCBI nr
Match: XP_023528631.1 (probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 3.7e-63
Identity = 180/324 (55.56%), Postives = 198/324 (61.11%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDF 60
           MGS  S G YS   FSD+F                     S  SS+SFDL G GI   DF
Sbjct: 2   MGSENSAGKYSPVGFSDDFSA------------------TSFGSSNSFDLLGSGI---DF 61

Query: 61  YNP-SSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIEE 120
           YNP SS+FDL+STT     P LSSP+STVPESSEV+NA                   I+E
Sbjct: 62  YNPLSSLFDLVSTTA----PLLSSPASTVPESSEVVNA-PPTPNSSSVSSYSNDAAAIDE 121

Query: 121 VDRN-----AKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPY 180
           VD+N     + ++            REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPY
Sbjct: 122 VDKNNTEKPSSSNVLKPKKKNPKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPY 181

Query: 181 PRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVA 240
           PRSYYRCTT  CGVKKRVER S+DHS V+TTYEG+HTHQSP+MPRGSIRIL ES   +  
Sbjct: 182 PRSYYRCTTVGCGVKKRVERLSNDHSTVVTTYEGKHTHQSPIMPRGSIRILPESNLDV-- 241

Query: 241 DHDVVTTGILFQPG--QPFMY----XXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXX 300
                TTG+LFQP   QPFMY    XXXXXXX              XXXXXXXXXXX   
Sbjct: 242 ---TTTTGLLFQPNTPQPFMYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVL 294

Query: 301 XXXXXXXXLVPLQVRKEPKDEQNG 313
                   LVPLQ+RKEPKDEQNG
Sbjct: 302 RDHGLLQDLVPLQMRKEPKDEQNG 294

[Close]

BLAST of Carg25644 vs. TAIR10
Match: AT5G49520.1 (WRKY DNA-binding protein 48)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 86/151 (56.95%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           RE RFAF+TKSDID+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT  CGVKKRVERSS D 
Sbjct: 205 REARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDP 264

Query: 200 SIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTG-----------ILFQPG 259
           SIV+TTYEGQHTH  P+ PRG I +L+      + DH   T             +L Q  
Sbjct: 265 SIVMTTYEGQHTHPFPMTPRGHIGMLTSP----ILDHGATTASSSSFSIPQPRYLLTQHH 324

Query: 260 QPF-MYXXXXXXXTN----DSSFLSPRPPPS 275
           QP+ MY        N    D +F++P P  S
Sbjct: 325 QPYNMYNNNSLSMINRRSSDGTFVNPGPSSS 351

[Close]

BLAST of Carg25644 vs. TAIR10
Match: AT1G69310.1 (WRKY DNA-binding protein 57)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           R+PRFAFMTKSD+D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT S+C VKKRVERSS D 
Sbjct: 131 RQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSDDP 190

Query: 200 SIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTGILFQPGQPFMYXXXXXX 259
           SIVITTYEGQH HQ+   PRG I + +   +   + H +           P+ Y      
Sbjct: 191 SIVITTYEGQHCHQTIGFPRGGI-LTAHDPHSFTSHHHLPP-----PLPNPYYYQELLHQ 250

Query: 260 XTNDSSFLSPRPP 273
              D++  SPR P
Sbjct: 251 LHRDNNAPSPRLP 257

[Close]

BLAST of Carg25644 vs. TAIR10
Match: AT4G18170.1 (WRKY DNA-binding protein 28)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33
Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           REPR +FMTKS++DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT +C VKKRVERS  D 
Sbjct: 156 REPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDP 215

Query: 200 SIVITTYEGQHTHQSPVMPRGS 222
           ++VITTYEGQH H  P   RGS
Sbjct: 216 TVVITTYEGQHNHPIPTNLRGS 237

[Close]

BLAST of Carg25644 vs. TAIR10
Match: AT1G29860.1 (WRKY DNA-binding protein 71)

HSP 1 Score: 138.3 bits (347), Expect = 8.2e-33
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           RE R AFMTKS+IDHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT +C VKKRVERS  D 
Sbjct: 120 REVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDP 179

Query: 200 SIVITTYEGQHTHQSPVMPRGSI 223
           SIVITTYEG+H H  P   RG++
Sbjct: 180 SIVITTYEGKHNHPIPSTLRGTV 202

[Close]

BLAST of Carg25644 vs. TAIR10
Match: AT2G47260.1 (WRKY DNA-binding protein 23)

HSP 1 Score: 135.2 bits (339), Expect = 7.0e-32
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 141 EPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHS 200
           E R AFMTKS++DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTT+ C VKKRVERS  D S
Sbjct: 159 EARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPS 218

Query: 201 IVITTYEGQHTHQSPVMPR 220
            V+TTYEGQHTH SP+  R
Sbjct: 219 TVVTTYEGQHTHISPLTSR 237

[Close]

BLAST of Carg25644 vs. Swiss-Prot
Match: sp|Q9FGZ4|WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-37
Identity = 86/151 (56.95%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           RE RFAF+TKSDID+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT  CGVKKRVERSS D 
Sbjct: 205 REARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDP 264

Query: 200 SIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTG-----------ILFQPG 259
           SIV+TTYEGQHTH  P+ PRG I +L+      + DH   T             +L Q  
Sbjct: 265 SIVMTTYEGQHTHPFPMTPRGHIGMLTSP----ILDHGATTASSSSFSIPQPRYLLTQHH 324

Query: 260 QPF-MYXXXXXXXTN----DSSFLSPRPPPS 275
           QP+ MY        N    D +F++P P  S
Sbjct: 325 QPYNMYNNNSLSMINRRSSDGTFVNPGPSSS 351

[Close]

BLAST of Carg25644 vs. Swiss-Prot
Match: sp|Q9C983|WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-34
Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           R+PRFAFMTKSD+D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT S+C VKKRVERSS D 
Sbjct: 131 RQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSDDP 190

Query: 200 SIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTGILFQPGQPFMYXXXXXX 259
           SIVITTYEGQH HQ+   PRG I + +   +   + H +           P+ Y      
Sbjct: 191 SIVITTYEGQHCHQTIGFPRGGI-LTAHDPHSFTSHHHLPP-----PLPNPYYYQELLHQ 250

Query: 260 XTNDSSFLSPRPP 273
              D++  SPR P
Sbjct: 251 LHRDNNAPSPRLP 257

[Close]

BLAST of Carg25644 vs. Swiss-Prot
Match: sp|Q8VWJ2|WRK28_ARATH (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.0e-32
Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           REPR +FMTKS++DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT +C VKKRVERS  D 
Sbjct: 156 REPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDP 215

Query: 200 SIVITTYEGQHTHQSPVMPRGS 222
           ++VITTYEGQH H  P   RGS
Sbjct: 216 TVVITTYEGQHNHPIPTNLRGS 237

[Close]

BLAST of Carg25644 vs. Swiss-Prot
Match: sp|Q93WV4|WRK71_ARATH (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 140 REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDH 199
           RE R AFMTKS+IDHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT +C VKKRVERS  D 
Sbjct: 120 REVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDP 179

Query: 200 SIVITTYEGQHTHQSPVMPRGSI 223
           SIVITTYEG+H H  P   RG++
Sbjct: 180 SIVITTYEGKHNHPIPSTLRGTV 202

[Close]

BLAST of Carg25644 vs. Swiss-Prot
Match: sp|O22900|WRK23_ARATH (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 141 EPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHS 200
           E R AFMTKS++DHL+DGYRWRKYGQKAVKNSP+PRSYYRCTT+ C VKKRVERS  D S
Sbjct: 159 EARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPS 218

Query: 201 IVITTYEGQHTHQSPVMPR 220
            V+TTYEGQHTH SP+  R
Sbjct: 219 TVVTTYEGQHTHISPLTSR 237

[Close]

BLAST of Carg25644 vs. TrEMBL
Match: tr|A0A0A0L834|A0A0A0L834_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168410 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 160/319 (50.16%), Postives = 174/319 (54.55%), Query Frame = 0


Query: 1   MGSATSTGIYSQTVFSDEFPVGG-SGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHD 60
           MG   S G YS  VFSD+FP      FS +FD+PC D HKA     S+FD          
Sbjct: 11  MGFDDSAGFYSPAVFSDDFPSSNFDSFSSIFDMPC-DAHKA-----SNFDFXXXXXXXXX 70

Query: 61  FYNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAXXXXXXXXXXXXXXXXXXPIEE 120
                                                 XXXXXXXXXXXXXXXXXX    
Sbjct: 71  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 130

Query: 121 VDRN---AKTSXXXXXXXXXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPR 180
                  + +             REPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPR
Sbjct: 131 XXXXXXPSASKVLKPIKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPR 190

Query: 181 SYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSEST-NCLVAD 240
           SYYRCTT+ CGVKKRVERSS DH+IV+TTYEGQHTHQSP+MPRGS+R+L EST N L  D
Sbjct: 191 SYYRCTTAGCGVKKRVERSSGDHTIVVTTYEGQHTHQSPIMPRGSLRVLPESTNNSLTVD 250

Query: 241 HDVVTTGILFQ--PGQPFMYXXXXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXX 300
           HD   TG+LFQ    QPFMY   XXXX              XX                 
Sbjct: 251 HDTTATGLLFQHNTSQPFMYIAPXXXXXXXXXXXXXXXXXXXXISFQPPSPQASVRDHGL 310

Query: 301 XXXLVPLQVRKEPKDEQNG 313
              LVPLQ+RKEPKDEQNG
Sbjct: 311 LQDLVPLQMRKEPKDEQNG 323

[Close]

BLAST of Carg25644 vs. TrEMBL
Match: tr|A0A2G9I0G1|A0A2G9I0G1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04017 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.9e-42
Identity = 135/215 (62.79%), Postives = 152/215 (70.70%), Query Frame = 0


Query: 27  SGVFDLPCDD--DHKASCSSSSSFDLFGGGIGFHDFYNPSSMF-DLLSTTTPPLQPPLSS 86
           + +FD+ C+   ++      SSSF  F   +   DF  PSS+F DLL   T PL PPL S
Sbjct: 36  NSLFDISCEQAINYDNQHQKSSSFG-FIDMLSVQDFSTPSSIFEDLLPNITIPLAPPLHS 95

Query: 87  PSSTVPESSEVLNA---------XXXXXXXXXXXXXXXXXXPIEEVDRNAKTSXXXXXXX 146
           P STVPE SEV+N          XXXXXXXXXXXXXXXXXX            XXXXXXX
Sbjct: 96  PPSTVPEYSEVVNTPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155

Query: 147 XXXXXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVER 206
           XXXX REPRFAFMTKS+IDHLDDGYRWRKYGQKAVKNSP+PRSYYRCT++ CGVKKRVER
Sbjct: 156 XXXXQREPRFAFMTKSEIDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSTACGVKKRVER 215

Query: 207 SSSDHSIVITTYEGQHTHQSPVMPRGSIRILSEST 230
           SS D SIV+TTYEG HTH  P+ PRGS  I+ E+T
Sbjct: 216 SSEDPSIVVTTYEGTHTHPCPITPRGSFGIMPETT 249

[Close]

BLAST of Carg25644 vs. TrEMBL
Match: tr|A0A2C9W9E5|A0A2C9W9E5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G206400 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 148/294 (50.34%), Postives = 172/294 (58.50%), Query Frame = 0


Query: 27  SGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDFYNPSSMFDLLSTTTPPLQP--PLSSP 86
           + +FD+    DH A  +S    DL  G   F      S + D      PP+ P  PL SP
Sbjct: 49  ASIFDMMMPYDHIADKASLGFMDLLDGNQDF----GTSLLLDCFQLQPPPILPHQPLPSP 108

Query: 87  SSTVPESSEVLNA-------XXXXXXXXXXXXXXXXXXPIEEVDRNAKTSXXXXXXXXXX 146
           +STVPESSEVLN        XXXXXXXXXXXXXXXXXX            XXXXXXXXXX
Sbjct: 109 ASTVPESSEVLNTPATPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 168

Query: 147 XXREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSS 206
           XX  PRFAFMTKS++DHLDDGYRWRKYGQKAVKNSP+PRSYYRCT++ CGVKKRVERSS 
Sbjct: 169 XXXXPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSAGCGVKKRVERSSE 228

Query: 207 DHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTGILFQPGQ-PFMY-XX 266
           D +IV+TTYEGQHTH SP+ PRGSI +L +S     A    V     +Q  Q  +MY   
Sbjct: 229 DPTIVVTTYEGQHTHPSPITPRGSIGLLPDSGCFGAATSSFVLPQSHYQQQQNAYMYSSS 288

Query: 267 XXXXXTNDSSFLSPRPPPSXXXXXXXXXXXXXXXXXXXXXXLVPLQVRKEPKDE 310
                + +SSF  P  P                        +VP Q+RKE  +E
Sbjct: 289 PSLNISTNSSFXPPXSPSFLQERRLSHSSASLFRDHGLLQDIVPSQMRKETPEE 338

[Close]

BLAST of Carg25644 vs. TrEMBL
Match: tr|A0A068LC88|A0A068LC88_GOSHI (WRKY transcription factor 32 OS=Gossypium hirsutum OX=3635 GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 6.4e-40
Identity = 124/254 (48.82%), Postives = 140/254 (55.12%), Query Frame = 0


Query: 15  FSDEFP--VGGSGFSGVFDL---PCDDDHKASCSSSSSFDLFGGGIGFHDFYNPSSMFDL 74
           FSDE P   GG G   +FD+    C+        S    DL    +G H  +   S+FD 
Sbjct: 6   FSDEIPSAFGGGGGGSIFDMAGTSCEGSGGDKWGSLGFMDL----LGIHQDFVAPSLFDS 65

Query: 75  LSTTTPPL------------------------------QPPLSSPSSTVPESSEVLNAXX 134
              +  P                               Q  L SP+STVPESSEVLN   
Sbjct: 66  FQPSILPXXXXXXXXXXXXXXXXXHEPHTDSKQQHLNHQAGLLSPASTVPESSEVLNNPA 125

Query: 135 XXXXXXXXXXXXXXXXPIEEV----DRNAKTSXXXXXXXXXXXXREPRFAFMTKSDIDHL 194
              XXXXXXXXXXXXX         D +                REPRFAFMTKSDIDHL
Sbjct: 126 TPNXXXXXXXXXXXXXXXXXXKAGNDEDKTKKPLKPQKKNPKRQREPRFAFMTKSDIDHL 185

Query: 195 DDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSP 230
           DDGYRWRKYGQKAVKNSPYPRSYYRCTT+ CGVKKRVERSS D +IV+TTYEGQHTH  P
Sbjct: 186 DDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTIVVTTYEGQHTHPCP 245

[Close]

BLAST of Carg25644 vs. TrEMBL
Match: tr|A0A1S4DSG1|A0A1S4DSG1_CUCME (probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC107990312 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 95/181 (52.49%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 147 MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTY 206
           MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTT+ CGVKKRVERSS DH+IV+TTY
Sbjct: 1   MTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSGDHTIVVTTY 60

Query: 207 EGQHTHQSPVMPRGSIRILSESTN-------------CLVADHDVVTTGILFQPGQPFMY 266
           EGQHTHQSP+MPRGS+R+L ESTN                             P  PF+ 
Sbjct: 61  EGQHTHQSPIMPRGSLRVLPESTNNXXXXXXXXXXXXXXXXXXXXXXXXXXSSPPSPFL- 120

Query: 267 XXXXXXXTNDSSFLSPRPP--PSXXXXXXXXXXXXXXXXXXXXXXLVPLQVRKEPKDEQN 313
                   N SS  +   P                          LVPLQ+R EPKDEQ+
Sbjct: 121 ------TINSSSVAATSTPHXXXPISFQPPSLPQASVRDHGLLQDLVPLQMRNEPKDEQD 174

The following BLAST results are available for this feature:

BLAST of Carg25644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942903.1	2.7e-122	90.79	probable WRKY transcription factor 48 [Cucurbita moschata]	[more]
XP_023540261.1	1.1e-120	90.16	probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo]	[more]
XP_022972028.1	1.2e-119	81.90	probable WRKY transcription factor 48 [Cucurbita maxima]	[more]
XP_022979875.1	1.2e-69	61.47	probable WRKY transcription factor 48 isoform X1 [Cucurbita maxima]	[more]
XP_023528631.1	3.7e-63	55.56	probable WRKY transcription factor 48 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25644 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49520.1	1.0e-38	56.95	WRKY DNA-binding protein 48	[more]
AT1G69310.1	1.4e-35	56.39	WRKY DNA-binding protein 57	[more]
AT4G18170.1	1.7e-33	76.83	WRKY DNA-binding protein 28	[more]
AT1G29860.1	8.2e-33	77.11	WRKY DNA-binding protein 71	[more]
AT2G47260.1	7.0e-32	77.22	WRKY DNA-binding protein 23	[more]

BLAST of Carg25644 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGZ4\|WRK48_ARATH	1.8e-37	56.95	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ...	[more]
sp\|Q9C983\|WRK57_ARATH	2.4e-34	56.39	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ...	[more]
sp\|Q8VWJ2\|WRK28_ARATH	3.0e-32	76.83	WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1	[more]
sp\|Q93WV4\|WRK71_ARATH	1.5e-31	77.11	WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1	[more]
sp\|O22900\|WRK23_ARATH	1.3e-30	77.22	WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1	[more]

BLAST of Carg25644 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L834\|A0A0A0L834_CUCSA	4.3e-52	50.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168410 PE=4 SV=1	[more]
tr\|A0A2G9I0G1\|A0A2G9I0G1_9LAMI	6.9e-42	62.79	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04017 P...	[more]
tr\|A0A2C9W9E5\|A0A2C9W9E5_MANES	1.2e-41	50.34	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G206400 PE=4 SV=...	[more]
tr\|A0A068LC88\|A0A068LC88_GOSHI	6.4e-40	48.82	WRKY transcription factor 32 OS=Gossypium hirsutum OX=3635 GN=WRKY32 PE=2 SV=1	[more]
tr\|A0A1S4DSG1\|A0A1S4DSG1_CUCME	1.4e-39	52.49	probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC107990312 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25644-RA	Carg25644-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 155..214 e-value: 8.6E-38 score: 141.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 156..213 e-value: 3.9E-26 score: 91.1
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 150..215 score: 31.628
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 140..216 e-value: 4.9E-33 score: 114.6
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 147..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..288
None	No IPR available	PANTHER	PTHR31221:SF80	SUBFAMILY NOT NAMED	coord: 123..304 coord: 11..115
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 123..304
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 11..115

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25644	Cla021806	Watermelon (97103) v1	carwmB0738
Carg25644	Csa3G168410	Cucumber (Chinese Long) v2	carcuB0757
Carg25644	MELO3C006724	Melon (DHL92) v3.5.1	carmeB0736
Carg25644	ClCG05G006660	Watermelon (Charleston Gray)	carwcgB0718
Carg25644	CSPI03G15090	Wild cucumber (PI 183967)	carcpiB0774
Carg25644	Cucsa.252440	Cucumber (Gy14) v1	carcgyB0833
Carg25644	CmaCh06G015710	Cucurbita maxima (Rimu)	carcmaB1036
Carg25644	CmaCh14G015810	Cucurbita maxima (Rimu)	carcmaB1035
Carg25644	CmoCh06G015650	Cucurbita moschata (Rifu)	carcmoB1007
Carg25644	CmoCh14G016120	Cucurbita moschata (Rifu)	carcmoB1006
Carg25644	Lsi05G014110	Bottle gourd (USVL1VR-Ls)	carlsiB678
Carg25644	Cp4.1LG03g11900	Cucurbita pepo (Zucchini)	carcpeB1042
Carg25644	Cp4.1LG08g05270	Cucurbita pepo (Zucchini)	carcpeB1043
Carg25644	CsGy3G015240	Cucumber (Gy14) v2	carcgybB0736
Carg25644	MELO3C006724.2	Melon (DHL92) v3.6.1	carmedB0749
Carg25644	CsaV3_3G015290	Cucumber (Chinese Long) v3	carcucB0777
Carg25644	Cla97C05G088270	Watermelon (97103) v2	carwmbB0776
Carg25644	Bhi01G000791	Wax gourd	carwgoB0876

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25644	Carg19612	Silver-seed gourd	carcarB317

The following block(s) are covering this gene:

None