Carg25584 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25584
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor
Location	Cucurbita_argyrosperma_scaffold_320 : 110338 .. 110922 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCCGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAAAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAATTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

mRNA sequence

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCCGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAAAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAATTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

Coding sequence (CDS)

ATGGACGACGCTCCGATTTCAGACGCCGCGGAATCGAAGAACTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGTCGGAAAATTGCTTCCGATGTTTGTGCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGTGGAAGCGATCCGGCACGTAAGTCGGCGGCGGTCCTCGGCGCAAGCAGGATCTCCAATCAACGGACGATTAGTTCGCGAAACCGCGGATTGCGTTCTTGCCGCCGCAGCCAAGGGGAGGACTCGTTGGAGTCGCGCCATTCTAGCGAGCCGATTCCGCCAAAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCGCGTATGGCGGAGACGAAGAGCGAGAAAAACAAGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTCGGCCGGTTAATTCCAGGTTGCCGTAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATCTCTGCTTTAGAGATGCAGGTAAGAGCCATGGCAGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAACTAA

Protein sequence

MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQSN

Homology

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BLAST of Carg25584 vs. NCBI nr
Match: XP_022937811.1 (transcription factor bHLH149-like [Cucurbita moschata])

HSP 1 Score: 357.1 bits (915), Expect = 3.9e-95
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH
Sbjct: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLPAVQRKVKILGRL+PGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 195
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Carg25584 vs. NCBI nr
Match: XP_023537600.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 8.1e-93
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDA ESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIR 
Sbjct: 1   MDDAPISDAEESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRQ 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAA AKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAVAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSRMAETKSEKNKKLPAVQRKVKILGRL+PGCRK+SFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLVPGCRKLSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 195
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Carg25584 vs. NCBI nr
Match: XP_022965958.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 340.5 bits (872), Expect = 3.7e-90
Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRH 60
           MDDAPISDA ESKNSRRLLQ+PNKRRKIA DV A+GRERKWRTEVEQQIYSSKLVEAIR 
Sbjct: 1   MDDAPISDAEESKNSRRLLQKPNKRRKIAFDVGAKGRERKWRTEVEQQIYSSKLVEAIRQ 60

Query: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120
           VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI
Sbjct: 61  VSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLI 120

Query: 121 GRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRA 180
           GRKPSR+AETKSEKNKKLPAVQRKVKILGRL+PGCRKVSFPNLLEETTDYISALEMQVRA
Sbjct: 121 GRKPSRIAETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRA 180

Query: 181 MAALVELLAGAQSN 195
           MAALVELLAGAQSN
Sbjct: 181 MAALVELLAGAQSN 194

[Close]

BLAST of Carg25584 vs. NCBI nr
Match: XP_022999326.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72
Identity = 154/187 (82.35%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA ESKNSRR LQ+PNKR +IAS+V AEGRER+WRTEVEQQIYSS+L EA++ VSR+RSS
Sbjct: 2   DAEESKNSRRSLQKPNKRLQIASNVSAEGRERRWRTEVEQQIYSSRLAEALQRVSRQRSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127
             A S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR+
Sbjct: 62  PHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRV 121

Query: 128 AETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187
            E    KN+KLPAVQRKVKILGRL+PGCRK+SFPNLLEE TDYISALEMQV+AMAAL E+
Sbjct: 122 EEV---KNRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 181

Query: 188 LAGAQSN 195
           LAGAQSN
Sbjct: 182 LAGAQSN 185

[Close]

BLAST of Carg25584 vs. NCBI nr
Match: XP_023545324.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 153/187 (81.82%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA ESKNS+R LQ+PNKRR+IASDV AEGRER+WRTEVEQQIYSS+L EA++ V R  SS
Sbjct: 2   DAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127
             A S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR+
Sbjct: 62  PHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRV 121

Query: 128 AETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187
           AE    KN+KLPAVQRKVKILG+L+PGCRK+SFPNLLEE TDYISALEMQV+AMAAL E+
Sbjct: 122 AEA---KNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 181

Query: 188 LAGAQSN 195
           LAGAQSN
Sbjct: 182 LAGAQSN 185

[Close]

BLAST of Carg25584 vs. TAIR10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-36
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 6   ISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRR 65
           I +  ES   ++         +I +    E   ++W+T   QQIY+ KLVEA+R V R+R
Sbjct: 9   IENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRV-RQR 68

Query: 66  SSAQAGSPIN------GRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKL 125
           SS  + +  +       R +R+TAD VLAA+A+G TRWSRAILASR R +L + R+ KK 
Sbjct: 69  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 128

Query: 126 IGRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVR 185
            G   SR   T++ +  KLPAV+RK+KILGRL+PGCRKVS PNLL+E TDYI+ALEMQVR
Sbjct: 129 TGNCKSRKGLTETNR-IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 188

Query: 186 AMAALVELLAGA 192
           AM AL ELL  A
Sbjct: 189 AMEALAELLTAA 198

[Close]

BLAST of Carg25584 vs. TAIR10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 125.6 bits (314), Expect = 3.4e-29
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 40  KWRTEVEQQIYSSKLVEAIR--HVSRRRSSAQAGS-PINGRLVRETADCVLAAAAKGRTR 99
           KWR+E +QQIYS+KLV A+R   +S++ SS+ + S P  GR VRE AD  LA AA+G+T 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 100 WSRAILASRF--------RQRLARRRRTKKLIG--RKPSRMAETKSEKNKKLPAVQRKVK 159
           WSRAIL+           RQR++    T    G  R   + A     K K LPAVQRKVK
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 160 ILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGA 192
           +L RL+PGCRK S P +LEETTDYI+A+EMQ+R M A++  ++ +
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Carg25584 vs. TAIR10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 74/166 (44.58%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 40  KWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPI---NGRLVRETADCVLAAAAKGRTR 99
           +WR+E +Q+IYS+KL +A++ V    S++ + SP     G+ VRE AD  LA +A+GRT 
Sbjct: 47  RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL 106

Query: 100 WSRAILASRFRQRLARRRRTKKLI-------------GRKPSRMAETKSEKNKKLPAVQR 159
           WSRAILA+R + +  ++RR +  +              R   R         K +P V R
Sbjct: 107 WSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 166

Query: 160 KVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
           KV++LGRL+PGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 167 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Carg25584 vs. TAIR10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 104.8 bits (260), Expect = 6.3e-23
Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 79  VRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKNKKL 138
           VR+TAD VLA  A+G TRWSRAIL SRF   L RRR TK       +      S + +KL
Sbjct: 89  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKL 148

Query: 139 PAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQ 193
            AV  +V++LG L+PGCR+ + P LL+ET DYI+ALEMQVRAM AL ++L+  Q
Sbjct: 149 SAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Carg25584 vs. TAIR10
Match: AT2G43060.1 (ILI1 binding bHLH 1)

HSP 1 Score: 44.7 bits (104), Expect = 7.7e-05
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 77  RLVRETADCVLAAAAKGRTR-WSRAIL--ASRFRQRLARRRRTKKLIGRKPSRMAETKSE 136
           R +++ A   +A AA G +R WSRA+L  A +   ++ R  R K  I  K  R       
Sbjct: 46  RKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDNKIVRFSRRKWKISSKRRR------- 105

Query: 137 KNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
            N++ P V+   + L  L+PG   +    L+EET  YI  L MQV+ M  LV+ L+
Sbjct: 106 SNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]

BLAST of Carg25584 vs. Swiss-Prot
Match: sp|O80482|BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-35
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 6   ISDAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRR 65
           I +  ES   ++         +I +    E   ++W+T   QQIY+ KLVEA+R V R+R
Sbjct: 9   IENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRV-RQR 68

Query: 66  SSAQAGSPIN------GRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKL 125
           SS  + +  +       R +R+TAD VLAA+A+G TRWSRAILASR R +L + R+ KK 
Sbjct: 69  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 128

Query: 126 IGRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVR 185
            G   SR   T++ +  KLPAV+RK+KILGRL+PGCRKVS PNLL+E TDYI+ALEMQVR
Sbjct: 129 TGNCKSRKGLTETNR-IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 188

Query: 186 AMAALVELLAGA 192
           AM AL ELL  A
Sbjct: 189 AMEALAELLTAA 198

[Close]

BLAST of Carg25584 vs. Swiss-Prot
Match: sp|Q9LSN7|BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-28
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 40  KWRTEVEQQIYSSKLVEAIR--HVSRRRSSAQAGS-PINGRLVRETADCVLAAAAKGRTR 99
           KWR+E +QQIYS+KLV A+R   +S++ SS+ + S P  GR VRE AD  LA AA+G+T 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 100 WSRAILASRF--------RQRLARRRRTKKLIG--RKPSRMAETKSEKNKKLPAVQRKVK 159
           WSRAIL+           RQR++    T    G  R   + A     K K LPAVQRKVK
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 160 ILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGA 192
           +L RL+PGCRK S P +LEETTDYI+A+EMQ+R M A++  ++ +
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Carg25584 vs. Swiss-Prot
Match: sp|Q9C8Z9|BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.9e-27
Identity = 74/166 (44.58%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 40  KWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPI---NGRLVRETADCVLAAAAKGRTR 99
           +WR+E +Q+IYS+KL +A++ V    S++ + SP     G+ VRE AD  LA +A+GRT 
Sbjct: 47  RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL 106

Query: 100 WSRAILASRFRQRLARRRRTKKLI-------------GRKPSRMAETKSEKNKKLPAVQR 159
           WSRAILA+R + +  ++RR +  +              R   R         K +P V R
Sbjct: 107 WSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 166

Query: 160 KVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 190
           KV++LGRL+PGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 167 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Carg25584 vs. Swiss-Prot
Match: sp|Q9M9L6|BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 79  VRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKNKKL 138
           VR+TAD VLA  A+G TRWSRAIL SRF   L RRR TK       +      S + +KL
Sbjct: 89  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKL 148

Query: 139 PAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQ 193
            AV  +V++LG L+PGCR+ + P LL+ET DYI+ALEMQVRAM AL ++L+  Q
Sbjct: 149 SAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Carg25584 vs. TrEMBL
Match: tr|A0A1S4E5A3|A0A1S4E5A3_CUCME (transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103503137 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 125/188 (66.49%), Postives = 144/188 (76.60%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA +S NS  LL  P  +R     + AE  +  W+TE++QQIYSS+L EA+R V+  RSS
Sbjct: 2   DADQSNNSTTLLPHPANKRP-PKILTAEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLA-RRRRTKKLIGRKPSR 127
               S ING LVR+TAD VLAA AKGR+RWSRAILA+RFRQ LA RRRRTKKL+ RKP  
Sbjct: 62  ----STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKP-- 121

Query: 128 MAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVE 187
             E K+EK +KLPAVQRKVKILGRL+PGCRK+SFPNLLEE TDYISALEMQV+AM AL E
Sbjct: 122 --ELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAE 180

Query: 188 LLAGAQSN 195
           LLAG Q N
Sbjct: 182 LLAGNQRN 180

[Close]

BLAST of Carg25584 vs. TrEMBL
Match: tr|A0A0A0LJ14|A0A0A0LJ14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.5e-47
Identity = 118/189 (62.43%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67
           DA +S NS+ LLQ  NK   +   +  E  + +W+TE++QQIYSS+L +A+R V+  RSS
Sbjct: 2   DADDSNNSKTLLQHSNK--CLPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRVTHPRSS 61

Query: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLAR--RRRTKKLIGRKPS 127
               SP+NG LVR TAD VLAA AKGRTRWSRAILA+RFRQ LAR         + RKP 
Sbjct: 62  ----SPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARXXXXXXXXXLARKP- 121

Query: 128 RMAETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALV 187
              E K+EK +KLPAVQRKVKILGRL+PGCRK+SFPNLLEE TDYISALEMQV+AM AL 
Sbjct: 122 ---ELKTEKVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALA 180

Query: 188 ELLAGAQSN 195
           ELLAG Q N
Sbjct: 182 ELLAGNQRN 180

[Close]

BLAST of Carg25584 vs. TrEMBL
Match: tr|A5AMF3|A5AMF3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_026724 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 100/175 (57.14%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 16  RRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPIN 75
           R +     KR+K+ S      R  +WRTE EQQIYS+KLVEAI  V  RRSSA A +   
Sbjct: 15  RSMESNRRKRKKMESGSQKVKRGGRWRTEAEQQIYSAKLVEAITKV--RRSSAPAAAVHR 74

Query: 76  GRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRMAETKSEKN 135
           GR VRE AD VLAAA KGRTRWSRAI+ SR   RL +RR+       +  + A +K E  
Sbjct: 75  GRAVREAADRVLAAAGKGRTRWSRAIMTSRVGLRLRKRRKVTVTGNNRLRKPAVSKQE-- 134

Query: 136 KKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAG 191
              P ++R+V++LGRL+PGCRK+SFPNLLEE TDYI+ALEMQVRAM AL ELLAG
Sbjct: 135 ---PPLKRRVRVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTALAELLAG 182

[Close]

BLAST of Carg25584 vs. TrEMBL
Match: tr|A0A2I4EAI7|A0A2I4EAI7_9ROSI (transcription factor bHLH149 OS=Juglans regia OX=51240 GN=LOC108987840 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.7e-36
Identity = 94/154 (61.04%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 40  KWRTEVEQQIYSSKLVEAIRHVSRRRSSAQAGSPINGRLVRETADCVLAAAAKGRTRWSR 99
           +WR+E EQ+IYS+KL EAIR V  RR+S+      +GR +++ AD VLA AAKGRTRWSR
Sbjct: 35  RWRSESEQRIYSTKLFEAIRQV--RRNSSPVNKVSSGRDIQDAADRVLAVAAKGRTRWSR 94

Query: 100 AILASRFRQRLA--RRRRTKKLIGRKPSRMAETKSEKNKKLPAVQRKVKILGRLIPGCRK 159
           AILASR R RLA   ++  K  + +    +     EK + +PA+QRKVK+L RL+PGCRK
Sbjct: 95  AILASRLRLRLAHNNKKHKKARLAKVTGSIRSKMPEKKRFIPALQRKVKVLSRLVPGCRK 154

Query: 160 VSFPNLLEETTDYISALEMQVRAMAALVELLAGA 192
           VSFPNLLEETTDYISALEMQVRAMAAL ELL G+
Sbjct: 155 VSFPNLLEETTDYISALEMQVRAMAALTELLTGS 186

[Close]

BLAST of Carg25584 vs. TrEMBL
Match: tr|A0A1S4DY77|A0A1S4DY77_CUCME (transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103492109 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36
Identity = 107/200 (53.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 1   MDDAPISDAAESKNSRRLLQ--QPNKRRKIAS-----DVCAEGRERKWRTEVEQQIYSSK 60
           MD  PIS   +   S    +  +P KRRKI S     D  A+ R R W TE E +IYSSK
Sbjct: 3   MDMDPISSNLQHLTSSHFTEDHRPTKRRKIQSPEISVDESADSRTR-WTTESEHRIYSSK 62

Query: 61  LVEAIRHVSRRRS-SAQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLAR 120
           LV+A+  V+  +S S  + S I+GR VRETAD VLA AAKG+TRWSRAIL +   QR  +
Sbjct: 63  LVDALHRVTAHKSTSLPSRSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQRKLK 122

Query: 121 RRRTKKLIGRKPSRMAETKSE-KNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYI 180
           +++  K +G   SR  + K + + +KLP VQRKV+ LGRL+PGCRK+SFPNLLEE +DYI
Sbjct: 123 KQKKVKTVG-NCSRAKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 182

Query: 181 SALEMQVRAMAALVELLAGA 192
           SAL+MQVRAM A+ ELL GA
Sbjct: 183 SALQMQVRAMTAVAELLGGA 200

The following BLAST results are available for this feature:

BLAST of Carg25584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937811.1	3.9e-95	99.48	transcription factor bHLH149-like [Cucurbita moschata]	[more]
XP_023537600.1	8.1e-93	97.42	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965958.1	3.7e-90	95.88	transcription factor bHLH149-like [Cucurbita maxima]	[more]
XP_022999326.1	6.0e-72	82.35	transcription factor bHLH149-like [Cucurbita maxima]	[more]
XP_023545324.1	1.7e-71	81.82	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25584 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09250.1	2.2e-36	50.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	3.4e-29	49.09	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	5.0e-28	44.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G05800.1	6.3e-23	53.51	AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1	[more]
AT2G43060.1	7.7e-05	34.48	ILI1 binding bHLH 1	[more]

BLAST of Carg25584 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80482\|BH149_ARATH	4.0e-35	50.52	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
sp\|Q9LSN7\|BH147_ARATH	6.2e-28	49.09	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
sp\|Q9C8Z9\|BH148_ARATH	8.9e-27	44.58	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
sp\|Q9M9L6\|BH150_ARATH	1.1e-21	53.51	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Carg25584 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E5A3\|A0A1S4E5A3_CUCME	1.9e-50	66.49	transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103503137 PE=4 S...	[more]
tr\|A0A0A0LJ14\|A0A0A0LJ14_CUCSA	7.5e-47	62.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1	[more]
tr\|A5AMF3\|A5AMF3_VITVI	2.1e-36	57.14	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_026724 PE=4 SV=1	[more]
tr\|A0A2I4EAI7\|A0A2I4EAI7_9ROSI	2.7e-36	61.04	transcription factor bHLH149 OS=Juglans regia OX=51240 GN=LOC108987840 PE=4 SV=1	[more]
tr\|A0A1S4DY77\|A0A1S4DY77_CUCME	3.5e-36	53.50	transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103492109 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25584-RA	Carg25584-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33124:SF7	TRANSCRIPTION FACTOR BHLH149-RELATED	coord: 21..193
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 21..193
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 139..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25584	Cla019979	Watermelon (97103) v1	carwmB0934
Carg25584	Csa2G034620	Cucumber (Chinese Long) v2	carcuB0950
Carg25584	ClCG02G014830	Watermelon (Charleston Gray)	carwcgB0910
Carg25584	CSPI02G04790	Wild cucumber (PI 183967)	carcpiB0973
Carg25584	Cucsa.090560	Cucumber (Gy14) v1	carcgyB1052
Carg25584	Lsi11G006440	Bottle gourd (USVL1VR-Ls)	carlsiB850
Carg25584	Cp4.1LG07g08560	Cucurbita pepo (Zucchini)	carcpeB1293
Carg25584	CsGy2G004930	Cucumber (Gy14) v2	carcgybB0923
Carg25584	CsaV3_2G007180	Cucumber (Chinese Long) v3	carcucB0974
Carg25584	Cla97C02G040620	Watermelon (97103) v2	carwmbB0979
Carg25584	Bhi06G001346	Wax gourd	carwgoB1079

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25584	Carg11997	Silver-seed gourd	carcarB524

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25584	Cucurbita maxima (Rimu)	carcmaB1280
Carg25584	Cucurbita moschata (Rifu)	carcmoB1251
Carg25584	Melon (DHL92) v3.5.1	carmeB0919
Carg25584	Melon (DHL92) v3.6.1	carmedB0926