Carg25508 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25508
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ammonium transporter
Location	Cucurbita_argyrosperma_scaffold_203 : 61629 .. 65926 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATCCAGTGGCTCTGAACACACCAGATTCTCTTACCTCCAATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGTAAGTATGGGCTTCATCTCAACTTTTCCCCCTCGATTTCGTTCAGTTCATATCCAATTTTCTGTTAGGGTTTTGATTGTTTGTGGCTGTTTTAATTTTATGTACAGGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATGTAAGAGGAAGTTTTAGATTCGATGTGTTTTGTTTTGTTTTTGTGTCATTCTGTAGCTCTGTTCTTAATGTTCTTCGGTTTTTGGGATTGAGATTAATATCCATTACGTTGTTTTGTATGTGAAGCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGGTACCGTTTCTGTTCTTATCGCTTGTATCTTTGCTTGTTTAGGCGTGTTCATATCCATTTTGGTTTCGTGATCGGATTGGAAAATGATGCTTATTAGTGATTTCTTTTACCTTGTGTTTGGAATGACTTCTGGAAGGTTAACAGTGCTTTTAGCTGCACTTTTCAAAAGATATGCCCTCTTTTCAAAGCACTTTTTTAAAAGTTATCCAAAATACACTCGAACGGAAAGTGTTACAATCCAAATTCACCGCTAGTAGATGTTGTCTTATTTGGGCTTTTCCTTCTGAGTTTCTCCTCAGGGTTTTAAAAACATTAGGGAGAAGTTTTCACACTCTTATGAAGAATGCTTCGTTCCCCTCTCTAACCGATGTGAGATCTCATAGAAAGGCCTGCGTACAAACTATCGTAGAAAATGTAACAAAAAAAAAATTGTCGACAATTCAACTGGTAAAGACAAATATATTACTATCGTTAGGAGCCTAAGTGTTTGAAACCCCACATCCATATTGTTGTTGAACCCAAAAAGAATGTTACAATGAAATTATCAAGAAGAAACAAGAAAATTAGAAAAAATTGTTAGGGAAAGATGCTTGAGGATGGTTGGGAGAGGAGTCCCACATTGGTTAATTAAGGGGTTGATCACGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGAAAAAAACCCAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGGTCGTGATTTCTAACATGGTATTAGAGTCATGTCCTTAACTTGACCATGTCAATAGAATTCTTAAATGTCGAGCAAAGAAGTTGCAACCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTTGTAAAAAGGGTATACTTTGTTTGAGGGCTCCAGAAAAGGAGTTGAGCCTCGATTAAGAGGAGGCTGTTCGAGGGTCCATAAGCCTCCGGGGAGGCTCTATGGTATACTTTGTTCGAGGGAAAGATTGTTGAGGATTGTTGGGAGAGGAGTCCCACGTCGGCTAATTAAGGGGTTGATCACGGGTTTATAAGTTACATTTCCATTGGTACAATGCCTTTTGGGAAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAACTGGACAATATCATACCATTGTGGAGGTCGTGGTTCCTAAATGCACCCTCTCTGCTACGCATGCTTCTTTTCTTATTGTTTATTCTCAAGTCTTCTTTATTGTAAAACCGTCGTAATAGGATGGACGTATTGATTTTCAACTCTCAACTTGAAATAAATGTGGATTCTCTGCTACAAATTTGTGATGTACTGAGAATTTTAGAATCTCTGCTTCAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGCAAGAACAGGACTCAAGGAAATTGATACTCAAGTATTTTGTGAAGAAATAAATGTGACCTTGTTTGGTCTCTCTCTGTTTAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGGTACATCGTAAACCCAAAATTACTTTTTCATGATCAAAGCTTTTGTGTTCATCAATCATATTGTATGAATTTTTCGAGTTAATGTGCGAAAAGATTTGAGATTGCTTAGAGATTCTGTTCACTATATACGGTTTCCTATGCTCTGCATAATTGGAAAGTCAATGACGTTATGTATTCCTTCTCGAGGTCGAGGAAATATCAACGTGTTAGGTTCTACCCTGTAATTTTGTTCATAGGAAAATGGAAAATCGAACTATAAATCTCGTCGGTACAAAAGTTTATCATTCAAGTTTTTCTAAGTTTCTTGGAAGTTTTCACAATTGTAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGGTTTGAACTTTATATTTGATGCAACGTATAAATTACAAATAAACCATTATTTTGCAGATTTGAACCATCTTGAACTTTATTCAAGTAATTGTAATAGCTCAAGCTCACCGCTAGCAGATATTGTTTTCTTTGAGCTTTCCCTTTCGGGCTTCCCCTCAAAGTTTTTAAAATGCGTCTATTAGGTAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTTCTAACTGATGTGGGATCTCACAATCCAAGTAATTGTAAAAGTAATTGTAAAATGCGTCTATTAGGGAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTTCCAATTGATGTGGGATCTCACAATCCATTTCCCTTTGGGGCCCAACGTTCTCGCTGTCACTCATTCCCTTCTCCAATCGATGTGCGGCCCCCAATCCACCCCCGACAGGGCTCAACATCCTTGCTAGCACACCGCCTCGTGTCCACCCCCTTTTAGGGCTCGCTGACATATTACCCGGTGTCTGGCTCTGATACCATTTGTAATGACCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTCGAGCTTTCCTTCGAGGCTTTTTAAAACGCGTCTACTATGGAGAGGTTTTCACACCCTTATAAAGAACGTTTCATTCTCCTCCCCAACTGATGTGGGGATCTCACAGTAATATTGTTCCACTCTTCAGTTTGGAGAGCTTCAAGTTGAACTGACTGCCGATAAGGCGAACATCGGTGCAGCAATCGGTGTCGTATTTGGGTAATCACCACTCGTTTTAACTCAATTCTTCAATTTTTTCTTCATTTATCAGATGAAAAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGGTACTAGAACCTTATGATTATTTTGATTCTTAAGTTCAATGCTTTATGGTAATTTGATGATTTATATATCCTAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAAGCTTGTCTTCTTTGTTTGTGAACTCTGTAAATGTGTTGTTTTCTGTTCGAACTAAGCTCCTTGCTGGGGCTTTTACTGAAAATGATATGAATCTATGTACATGACAATAATCCTGCTCGGTTTTAGAATAAGAGGGGCTGATGTTCTCTTTGTTTTTTCTTTTTTCTTTTTAGTTTTGAATGAGAAACATGGGAATAGCCTTCTAGAGCCAAAAGCTGAACAAAACAACCCAAGGGACAAAGTGATAAGACATCGTTGAACACCGTCGAGTACGCCTCCTTCCAAATAAGCGACGGGATAGCTCTTGCAAGATTCATCGGAAACACTCTTTGAGTTTGCCTTTAGAAAACCACCCCGAAAAGATTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAATTGATGTGAGATCTCATAATCCACCCCTTCGGGGTCCAGCGTCTT

mRNA sequence

AAAAAAATCCAGTGGCTCTGAACACACCAGATTCTCTTACCTCCAATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAAGCTTGTCTTCTTTGTTTGTGAACTCTGTAAATGTGTTGTTTTCTGTTCGAACTAAGCTCCTTGCTGGGGCTTTTACTGAAAATGATATGAATCTATGTACATGACAATAATCCTGCTCGGTTTTAGAATAAGAGGGGCTGATGTTCTCTTTGTTTTTTCTTTTTTCTTTTTAGTTTTGAATGAGAAACATGGGAATAGCCTTCTAGAGCCAAAAGCTGAACAAAACAACCCAAGGGACAAAGTGATAAGACATCGTTGAACACCGTCGAGTACGCCTCCTTCCAAATAAGCGACGGGATAGCTCTTGCAAGATTCATCGGAAACACTCTTTGAGTTTGCCTTTAGAAAACCACCCCGAAAAGATTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAATTGATGTGAGATCTCATAATCCACCCCTTCGGGGTCCAGCGTCTT

Coding sequence (CDS)

ATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAA

Protein sequence

MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLEPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAKAMNTTGKLLSASSAPKVAEQPKDETRMFKVAYPFHVLNVKCRVISWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE

Homology

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BLAST of Carg25508 vs. NCBI nr
Match: XP_022961081.1 (uncharacterized protein LOC111461699 isoform X1 [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 2.6e-140
Identity = 277/299 (92.64%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

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BLAST of Carg25508 vs. NCBI nr
Match: XP_022961082.1 (uncharacterized protein LOC111461699 isoform X2 [Cucurbita moschata])

HSP 1 Score: 506.5 bits (1303), Expect = 5.9e-140
Identity = 276/299 (92.31%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKE+
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKED 299

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BLAST of Carg25508 vs. NCBI nr
Match: XP_022988171.1 (uncharacterized protein LOC111485488 isoform X2 [Cucurbita maxima])

HSP 1 Score: 496.1 bits (1276), Expect = 7.9e-137
Identity = 273/299 (91.30%), Postives = 275/299 (91.97%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTVDKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_023516677.1 (uncharacterized protein LOC111780489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.7 bits (1267), Expect = 8.8e-136
Identity = 271/299 (90.64%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTL FALAESDSAKSLE
Sbjct: 206 MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLPFALAESDSAKSLE 265

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 266 PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 325

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 326 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 385

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 386 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 445

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSS VLSAFTAVGLVLLARQLKSKEE
Sbjct: 446 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSTVLSAFTAVGLVLLARQLKSKEE 504

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_022961083.1 (uncharacterized protein LOC111461699 isoform X3 [Cucurbita moschata])

HSP 1 Score: 451.1 bits (1159), Expect = 2.9e-123
Identity = 242/265 (91.32%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSL 255
           QGVQSIPESSLQYANDNALLLAK L
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKDL 265

[Close]

BLAST of Carg25508 vs. TAIR10
Match: AT5G37360.1 (unknown protein)

HSP 1 Score: 296.2 bits (757), Expect = 2.2e-80
Identity = 176/303 (58.09%), Postives = 212/303 (69.97%), Query Frame = 0


Query: 2   ASLHLLQPLTFLSSHSAPLSSQCSH-PIRFKPSFAPKPLSPKPLTLSFALAESDSAKSL- 61
           +S+ LLQPL  LSS +   S    H     KP+ + +    K LTL FAL ESDS K L 
Sbjct: 7   SSISLLQPLHSLSSSTLFFSQPSFHFSSSLKPNKSKRHNLSKSLTLRFALTESDSTKPLE 66

Query: 62  --EPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILL 121
             EP  + LL +L+  FDL  DYF++LP DLRLDLNDAAFDLSNGPVIDECGQE+GE LL
Sbjct: 67  IEEPSSKSLLLQLSKCFDLPSDYFQQLPNDLRLDLNDAAFDLSNGPVIDECGQELGETLL 126

Query: 122 NLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQK 181
           NLSRAWE ADTSTS +LV KLP L   LT+  +S  GKRLISAG+RFQ MGQY +GELQK
Sbjct: 127 NLSRAWEQADTSTSRSLVEKLPELEILLTDGARSAFGKRLISAGKRFQGMGQYAKGELQK 186

Query: 182 IAKAMNTTGKLLSA-SSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVIS 241
           IAKAM TTG +LSA +S+  V+ + K  TRMFK            AY    +     ++S
Sbjct: 187 IAKAMITTGGVLSAKTSSVSVSNESKSGTRMFKFGELQVAVTPEKAYTGAAIAFIYGILS 246

Query: 242 WQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKS 289
           WQ+ QG+QSIPE+SLQYANDNALL+ KSLRG+LLA+ Y+S VLS FT  GL+LLA+QL S
Sbjct: 247 WQISQGIQSIPENSLQYANDNALLIGKSLRGSLLALFYASTVLSGFTTAGLILLAKQLSS 306

[Close]

BLAST of Carg25508 vs. TrEMBL
Match: tr|A0A1S3B8P9|A0A1S3B8P9_CUCME (uncharacterized protein LOC103487250 OS=Cucumis melo OX=3656 GN=LOC103487250 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.9e-119
Identity = 243/300 (81.00%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLS-PKPLTLSFALAESDSAKSL 60
           MASLHLLQPLTFLSSHSAPL SQ S+PI F+PSF   P    K LTLSFALAESDS KSL
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSNPISFRPSFPKNPFPLKKSLTLSFALAESDSPKSL 60

Query: 61  EPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNL 120
            PDPQ+LLQELAD FDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNL
Sbjct: 61  PPDPQLLLQELADGFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNL 120

Query: 121 SRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWE ADTSTSH LVSK P+LVQSLT+NYKSG GKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 KAMNTTGKLLSASSAPKVAEQPKDETRMFK-----VAYPFHVLNVKCR------VISWQL 240
           + MNTTGKLLSASS PKVAE+P++ETRMFK     V       N+         VISWQL
Sbjct: 181 EVMNTTGKLLSASSTPKVAEEPQNETRMFKFGELQVELTADKANIGAAIGFVFGVISWQL 240

Query: 241 GQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
            QGVQSI ESSLQYAN+NALLLAKSLRGALLAVSY+SAVLSAFT VGL+LLARQLKSKEE
Sbjct: 241 SQGVQSIRESSLQYANENALLLAKSLRGALLAVSYTSAVLSAFTTVGLILLARQLKSKEE 300

[Close]

BLAST of Carg25508 vs. TrEMBL
Match: tr|A0A0A0M0A2|A0A0A0M0A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665900 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-118
Identity = 240/300 (80.00%), Postives = 255/300 (85.00%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLS-PKPLTLSFALAESDSAKSL 60
           MASLHLLQPLTFLSSHS PL SQ S+PI F+PSF  KP    K LTLSFAL ESDS KSL
Sbjct: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60

Query: 61  EPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNL 120
           +P+P++LLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPV+DECGQEMGEILLNL
Sbjct: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120

Query: 121 SRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWE ADTSTSH LVSK P+LVQSLT+NYKSG GKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 KAMNTTGKLLSASSAPKVAEQPKDETRMFK-----VAYPFHVLNVKCR------VISWQL 240
           + MNTTGKLLSA S PKVAE+PK ETRMFK     V       N+         VISWQL
Sbjct: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGVISWQL 240

Query: 241 GQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
            QGVQS+ ESSLQYAN+NALLLAKSLRGALLAVSYSSAVLSAFT VGL+LLARQLKSKEE
Sbjct: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300

[Close]

BLAST of Carg25508 vs. TrEMBL
Match: tr|A0A2P6R5I6|A0A2P6R5I6_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0449091 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 197/304 (64.80%), Postives = 227/304 (74.67%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPI----RFKPSFAPKPLSPKPLTLSFALAESDSA 60
           MASL  LQPLT LSS +  +  +  H I      KPS  PKPL+ K  T SF+LAESDS 
Sbjct: 8   MASLLFLQPLTNLSSSTTLVFLRNPHHIPTSTSLKPSNTPKPLTFKSFTTSFSLAESDSP 67

Query: 61  KSLEPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEIL 120
           KSL+P+ + +LQELADSFDL  DYF KLP DLR DLNDAAFDLSNG +IDECGQE+GE L
Sbjct: 68  KSLQPEIRPVLQELADSFDLPPDYFAKLPNDLRRDLNDAAFDLSNGKIIDECGQELGETL 127

Query: 121 LNLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQ 180
           LNLSRAWEVADTS SH+L SKLP L +SLT+N KS LGKRL+SAGRRFQSMGQYG+GELQ
Sbjct: 128 LNLSRAWEVADTSMSHSLASKLPDLEESLTDNAKSALGKRLVSAGRRFQSMGQYGEGELQ 187

Query: 181 KIAKAMNTTGKLLSASSAPKVAE-QPKDETRMFKV-----------AYPFHVLNVKCRVI 240
           KIAK +   GKLLSASS   V + +PK+E+RM K            A    +++    ++
Sbjct: 188 KIAKTLTRAGKLLSASSTSTVTDTEPKNESRMLKFGELQLELTSEKATVGAIISFAFGIL 247

Query: 241 SWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLK 289
           SWQL QGVQ+ PESSLQYANDNALLLAKSLRGALLA  YSSA+LSAFT  GL+LL RQLK
Sbjct: 248 SWQLAQGVQNTPESSLQYANDNALLLAKSLRGALLAACYSSALLSAFTTFGLILLGRQLK 307

[Close]

BLAST of Carg25508 vs. TrEMBL
Match: tr|V4VTL8|V4VTL8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021307mg PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.8e-90
Identity = 197/297 (66.33%), Postives = 221/297 (74.41%), Query Frame = 0


Query: 7   LQPLTFLS--SHSAPLSSQCSHPI-RFKPSFAPKPLSPKPLTLSFALAESDSAKSLEPDP 66
           LQPL  LS  SH+  L  Q +H I   K S  P   S KPLT+ FAL ESDS KSL+PD 
Sbjct: 11  LQPLNSLSSTSHNTLLFHQNTHYIPPLKVSAKPFLSSSKPLTVLFALTESDSPKSLQPDS 70

Query: 67  QVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLSRAW 126
           Q LLQELADSFDL  DY  +LPRDLRLDLNDAAFDLSNGPV+DECGQE+GE+LLNL+RAW
Sbjct: 71  QTLLQELADSFDLPSDYLAQLPRDLRLDLNDAAFDLSNGPVVDECGQELGELLLNLTRAW 130

Query: 127 EVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAKAMN 186
           E AD+STSH+LV KLP+L  SLT+N KS  GKRLISAGRRFQ+MGQYGQGELQKIAKAM 
Sbjct: 131 EQADSSTSHSLVKKLPALESSLTDNAKSAFGKRLISAGRRFQAMGQYGQGELQKIAKAMT 190

Query: 187 TTGKLLSASS-APKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLGQG 246
             GKLLSASS +  + EQPK ETRM K            AY    +     ++SW+LGQG
Sbjct: 191 AAGKLLSASSISTTIDEQPKKETRMLKFGELQVEVTPEKAYIGAAIGFVFGILSWELGQG 250

Query: 247 VQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           +QS PESSLQYANDNALLLAKSLRGALLA  YSS +LS FT +GL L  RQL SKE+
Sbjct: 251 IQSTPESSLQYANDNALLLAKSLRGALLAACYSSTLLSVFTVIGLFLYGRQLASKEK 307

[Close]

BLAST of Carg25508 vs. TrEMBL
Match: tr|A0A2P4KIT6|A0A2P4KIT6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17573 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 8.2e-90
Identity = 205/306 (66.99%), Postives = 227/306 (74.18%), Query Frame = 0


Query: 2   ASLHLL---QPLTFLSSHSAPLSSQCSHPIRFKPSFAP--KPLSPKPLTLSFALAE-SDS 61
           +SLHLL   QPL    S +APL       I    S  P  KPL  KPLT+ FAL E SDS
Sbjct: 3   SSLHLLTQVQPLPNFPSITAPLFPPKPFHIPSLTSLKPSNKPLFSKPLTVPFALTESSDS 62

Query: 62  AKSLEP--DPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMG 121
             SL+P  + Q LLQ+LADSFDL +DYF +LP DLR+DLNDAAFDLSNGPVIDECGQ +G
Sbjct: 63  PNSLQPNNNAQSLLQQLADSFDLPQDYFSQLPSDLRIDLNDAAFDLSNGPVIDECGQVLG 122

Query: 122 EILLNLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQG 181
           + LLNLSRAWE+ADTSTSH+L SKLP L +SLT+N KS LGKRL+SAGRRFQSMGQYGQG
Sbjct: 123 DTLLNLSRAWELADTSTSHSLASKLPGLEESLTDNAKSALGKRLVSAGRRFQSMGQYGQG 182

Query: 182 ELQKIAKAMNTTGKLLSASSAPKVA-EQPKDETRMFKV-----------AYPFHVLNVKC 241
           ELQKIAK M TTG+LLSA S    A EQ K ETRMFK            AY    +    
Sbjct: 183 ELQKIAKVMVTTGRLLSAISVSTAAEEQSKKETRMFKFGELQVEFTSDKAYIGAAIGFAF 242

Query: 242 RVISWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLAR 288
            ++SWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLA+ YSSAVLSAF+ VGLVLL R
Sbjct: 243 GILSWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAICYSSAVLSAFSTVGLVLLGR 302

The following BLAST results are available for this feature:

BLAST of Carg25508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961081.1	2.6e-140	92.64	uncharacterized protein LOC111461699 isoform X1 [Cucurbita moschata]	[more]
XP_022961082.1	5.9e-140	92.31	uncharacterized protein LOC111461699 isoform X2 [Cucurbita moschata]	[more]
XP_022988171.1	7.9e-137	91.30	uncharacterized protein LOC111485488 isoform X2 [Cucurbita maxima]	[more]
XP_023516677.1	8.8e-136	90.64	uncharacterized protein LOC111780489 [Cucurbita pepo subsp. pepo]	[more]
XP_022961083.1	2.9e-123	91.32	uncharacterized protein LOC111461699 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg25508 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37360.1	2.2e-80	58.09	unknown protein	[more]

BLAST of Carg25508 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25508 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B8P9\|A0A1S3B8P9_CUCME	2.9e-119	81.00	uncharacterized protein LOC103487250 OS=Cucumis melo OX=3656 GN=LOC103487250 PE=...	[more]
tr\|A0A0A0M0A2\|A0A0A0M0A2_CUCSA	1.9e-118	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665900 PE=4 SV=1	[more]
tr\|A0A2P6R5I6\|A0A2P6R5I6_ROSCH	1.3e-90	64.80	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0449091 PE=4...	[more]
tr\|V4VTL8\|V4VTL8_9ROSI	2.8e-90	66.33	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021307mg PE=4 ...	[more]
tr\|A0A2P4KIT6\|A0A2P4KIT6_QUESU	8.2e-90	66.99	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17573 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25508-RA	Carg25508-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36802	FAMILY NOT NAMED	coord: 13..287

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25508	Csa1G665900	Cucumber (Chinese Long) v2	carcuB0305
Carg25508	ClCG03G011490	Watermelon (Charleston Gray)	carwcgB0270
Carg25508	CSPI01G32920	Wild cucumber (PI 183967)	carcpiB0309
Carg25508	Cucsa.027610	Cucumber (Gy14) v1	carcgyB0327
Carg25508	CmaCh10G010300	Cucurbita maxima (Rimu)	carcmaB0389
Carg25508	CmoCh10G010870	Cucurbita moschata (Rifu)	carcmoB0387
Carg25508	Lsi06G007620	Bottle gourd (USVL1VR-Ls)	carlsiB251
Carg25508	Cp4.1LG18g01040	Cucurbita pepo (Zucchini)	carcpeB0392
Carg25508	CsGy1G031700	Cucumber (Gy14) v2	carcgybB0293
Carg25508	CsaV3_1G045040	Cucumber (Chinese Long) v3	carcucB0308
Carg25508	Cla97C03G061860	Watermelon (97103) v2	carwmbB0286
Carg25508	Bhi02G001066	Wax gourd	carwgoB0363

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None