CSPI01G32920 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G32920
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Replicative DNA helicase
Location	Chr1 : 27814071 .. 27816984 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATATCTCTTATTATTATTATGGGAAAGCTTTTCTCAAACTAACAAAAATTTTAGTGGCTGACGCAAACAACACCAGATTCTCAACTCTCACTCCAATGGCTTCTCTTCACCTTCTTCAACCTCTAACCTTTCTGTCTTCCCATTCCGTCCCTCTCTTTTCCCAATATTCCAATCCAATCAGTTTCAGACCCTCCTTCCCGAAAAAGCCCTTTCCACTGAAGAAATCCCTCACTCTTTCCTTTGCTCTAACCGAGTCTGACTCCCCCAAGTCCTTACAACCCAACCCCGAGCTTCTCCTTCAAGAATTGGCCGTAAGTATGGCCTTCATCTCAAAATTTCCCCTATCCAATTCCTTAACTTCATGTCTCATTTTCTGTTTTGATTGTAATTTTTTGTACAGGACAGTTTTGATCTTTCAAGAGATTACTTTGAAAAGCTTCCCCGTGATCTTCGTCTTGATGTACGTGGTACATTTTTATTTTTATTTTTTTGTTCTCGAGTGATTCTGTGGTTCTTTTTTATTAATTTTTTTCGTGTTTTGCGATTGAGAGTGAATATTGATAATGTTGTTTTATATGTGAAGCTCAACGATGCTGCTTTTGATCTTTCTAATGGACCCGTTGTTGACGAGGTATTTTCTCTGTTCTGCTAGCTTGTTTAGGGCTGTTTACATCCATTTTGGTTTTCATTATCTTATTAGAAATTGTGCTTATTGGTGATTTCTTTACCTTATATTTGTAATTACTTTTGTAGGTTTAATAGTGCTGATTTTCAAAAGTTATTCCAAAATACTATTCGGAGCTGGTTTCAAGAACTGAAAGGCCTGTGTATATTTCGGTTAAGACTTCAAAAGTATTTCTAAACAGTAGCAAATGTAACTAAGTAATTGTGAATTTAAGCATAGCTCGATTGTTAAAGGCAAAGATACTGTGTTACTCATTTAGCGTTGAAGCCAGATGTTTGAAATCTCATATAAGTAAAGGCAAAGATATGGTATTACTCATTTAGCATAGAAGCCGTATGACATGACCTTGATAAAGGGCTAAGAGGTCATAGATTCATTCTATTGTGACTACCTACTTACAATTTAATATCTTGGGACGTTCTTCGGTACCCAAATGTTGTAAGGTTAGATGGGTTGTCTCGTGAGATTAATGAAGTAGAAATGTAACCAAAGAAAAAAAAACATGTAACAAAAGTATTACCAAGAAGTAACAAGTTAGAAACAATTATTAGGGGAAGGTTGGCACAATAAGTTGGCACCCACTCTGCTGCGCATGCTTTCTTTTTTATTTTTGATTCTCAAGCTTTTTGTATTGTCGAACTTTCATAATAAGATGAACTTTTTTATTAACTCTCCAGTCAAAGTAAATGTGAATTATCTGATATAAGCTTGTGATGTACTGTGAATGTTGAATTTCTGCTTCAGTGTGGTCAAGAGATGGGAGAAATATTGCTAAATCTCTCCCGAGCTTGGGAAGCCGCTGACACCTCCACTTCACATGCTTTAGTAAGCAAGTTCCCTACGTTGGTGCAATCCTTGACAGACAATTACAAGTCAGGCAAGAACAGGACTCAAGAAAACTGATGCTCAAGTATTTTGTGAAAAAATCACTGTGACCTTTGTTTGGTCTATCTATTTAGGATTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAGTCAATGGGACAGTACGGTCAGGGTGAACTACAGAAGGTACATCGTAAACTCTAAACTATCTTTTTCATAACAGAGCTTTTATTATGTACATCAATCATATCGTGAGAAGTCTGAAGAATAGGTTTTAGGTTGCTTAGAGATTCCATAGAATCTCATTATCTATCTATAGTTTGTTTATATTAGTCAATTCTTAATGTTGATAATTTTTCCTATGGTCTACATAATTGGAAACTTAATGATGTTTATGCTGTGTATTCCTTCTTGAAGTCAATGGAATATCAACATGCTGGTGGATTTTCTTCAAGAATGGAAAACGAAAATCAATTATAATTCTCTTCAATACAATATTTTATTATTCAAGATTTTTACTTTTCTTGAAAGTTTTCACGATTATAGATTGCCGAAGTAATGAATACAACTGGAAAGCTTCTGTCTGCATTGTCTACTCCTAAAGTAGCTGAAGAGCCCAAGATCGAAACCAGAATGTTTAAGGTAGGTTTGAACTTTACATTAGATTTGATGTAACATATACTTTGCAGATAAACCATTACGTTTCAGGTATGACTTGACATGAACTTTATTTAAGTAATATTGTTCAAAACTTCAGTTTGGAGAGCTTCAAGTTGAACTGACTGCTGAGAAGGCAAACATCGGTGCAGCAATTGGTTTTGTTTTTGGGTAATCACCACTCATATAAGTAGATCCTTTAATAATTTATTCATTTATCAGATGACAAGAATATCCTTTTCATGTTTAAAATGTAAAATGCAGATTAATTTCATGGCAACTGAGTCAGGGTGTCCAAAGTGTTAGTGAGAGTTCTCTGCAGTATGCAAATGAAAATGCTTTACTTCTAGCCAAGGTACTACAACCATTAATTTAAATTTTATGATTATTTTGATTCTTTGCATTTAATGCTGAATGAAGATAACTAATGACTGATATATACTCCAGTCTTTGAGAGGCGCTCTACTTGCGGTTTCATACTCATCGGCTGTTTTGTCTGCTTTCACTACCGTGGGATTAATCTTACTTGCTAGACAACTGAAATCAAAGGAAGAGTAAGCTTGTCTTACTTATTTTCCTCAACTCTTGTAAATGTGTTGTATTCAGTCAAAGAACTAAGCTCCTTGCTGGGCCTTTTACTAAAGAATTATATGAATCGATCTATGTACATGACAATAATCTTGCTCAGTTTTAAAATAAGAGTACCTGATATTCACC

mRNA sequence

ATGGCTTCTCTTCACCTTCTTCAACCTCTAACCTTTCTGTCTTCCCATTCCGTCCCTCTCTTTTCCCAATATTCCAATCCAATCAGTTTCAGACCCTCCTTCCCGAAAAAGCCCTTTCCACTGAAGAAATCCCTCACTCTTTCCTTTGCTCTAACCGAGTCTGACTCCCCCAAGTCCTTACAACCCAACCCCGAGCTTCTCCTTCAAGAATTGGCCGACAGTTTTGATCTTTCAAGAGATTACTTTGAAAAGCTTCCCCGTGATCTTCGTCTTGATCTCAACGATGCTGCTTTTGATCTTTCTAATGGACCCGTTGTTGACGAGTGTGGTCAAGAGATGGGAGAAATATTGCTAAATCTCTCCCGAGCTTGGGAAGCCGCTGACACCTCCACTTCACATGCTTTAGTAAGCAAGTTCCCTACGTTGGTGCAATCCTTGACAGACAATTACAAGTCAGGATTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAGTCAATGGGACAGTACGGTCAGGGTGAACTACAGAAGATTGCCGAAGTAATGAATACAACTGGAAAGCTTCTGTCTGCATTGTCTACTCCTAAAGTAGCTGAAGAGCCCAAGATCGAAACCAGAATGTTTAAGTTTGGAGAGCTTCAAGTTGAACTGACTGCTGAGAAGGCAAACATCGGTGCAGCAATTGGTTTTGTTTTTGGATTAATTTCATGGCAACTGAGTCAGGGTGTCCAAAGTGTTAGTGAGAGTTCTCTGCAGTATGCAAATGAAAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTTGCGGTTTCATACTCATCGGCTGTTTTGTCTGCTTTCACTACCGTGGGATTAATCTTACTTGCTAGACAACTGAAATCAAAGGAAGAGTAA

Coding sequence (CDS)

ATGGCTTCTCTTCACCTTCTTCAACCTCTAACCTTTCTGTCTTCCCATTCCGTCCCTCTCTTTTCCCAATATTCCAATCCAATCAGTTTCAGACCCTCCTTCCCGAAAAAGCCCTTTCCACTGAAGAAATCCCTCACTCTTTCCTTTGCTCTAACCGAGTCTGACTCCCCCAAGTCCTTACAACCCAACCCCGAGCTTCTCCTTCAAGAATTGGCCGACAGTTTTGATCTTTCAAGAGATTACTTTGAAAAGCTTCCCCGTGATCTTCGTCTTGATCTCAACGATGCTGCTTTTGATCTTTCTAATGGACCCGTTGTTGACGAGTGTGGTCAAGAGATGGGAGAAATATTGCTAAATCTCTCCCGAGCTTGGGAAGCCGCTGACACCTCCACTTCACATGCTTTAGTAAGCAAGTTCCCTACGTTGGTGCAATCCTTGACAGACAATTACAAGTCAGGATTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAGTCAATGGGACAGTACGGTCAGGGTGAACTACAGAAGATTGCCGAAGTAATGAATACAACTGGAAAGCTTCTGTCTGCATTGTCTACTCCTAAAGTAGCTGAAGAGCCCAAGATCGAAACCAGAATGTTTAAGTTTGGAGAGCTTCAAGTTGAACTGACTGCTGAGAAGGCAAACATCGGTGCAGCAATTGGTTTTGTTTTTGGATTAATTTCATGGCAACTGAGTCAGGGTGTCCAAAGTGTTAGTGAGAGTTCTCTGCAGTATGCAAATGAAAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTTGCGGTTTCATACTCATCGGCTGTTTTGTCTGCTTTCACTACCGTGGGATTAATCTTACTTGCTAGACAACTGAAATCAAAGGAAGAGTAA

Homology

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BLAST of CSPI01G32920 vs. TrEMBL
Match: A0A0A0M0A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665900 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 1.4e-158
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 1


Query: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60
           MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL
Sbjct: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60

Query: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120
           QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL
Sbjct: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120

Query: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQL 240
           EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFG+ISWQL
Sbjct: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGVISWQL 240

Query: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300
           SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE
Sbjct: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300

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BLAST of CSPI01G32920 vs. TrEMBL
Match: A0A061F2B0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026127 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.3e-104
Identity = 205/302 (67.88%), Postives = 242/302 (80.13%), Query Frame = 1


Query: 7   LQPLTFLS--SHSVPLF-----SQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKS 66
           LQPLTF S  SHS  L      + + +  S R  F  K   L K  T+ FALTESDSPKS
Sbjct: 11  LQPLTFPSTPSHSPTLLFHQNLNYFPSKTSLRKPFNSKKLQLSKPQTIPFALTESDSPKS 70

Query: 67  LQPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLN 126
           L+PNP+ LLQE+ADSFDL  DYF +LP DLRLDLNDAAFDLSNGPV+DECG E+GE LLN
Sbjct: 71  LEPNPQTLLQEVADSFDLPSDYFSQLPGDLRLDLNDAAFDLSNGPVIDECGLELGETLLN 130

Query: 127 LSRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKI 186
           +SRAWE ADTSTS  L SK P L  SLTDN KS FG+RL++AGRRFQ+MGQYGQGELQKI
Sbjct: 131 ISRAWEQADTSTSRTLASKLPLLGSSLTDNAKSAFGRRLVTAGRRFQAMGQYGQGELQKI 190

Query: 187 AEVMNTTGKLLSALSTPKVA-EEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISW 246
           A+ M   GKLLSA+S    + E+PK+ETRM KFG+LQVE+T+EKANIGAAIGFVFG++SW
Sbjct: 191 AKAMTAAGKLLSAISVSATSDEQPKMETRMLKFGDLQVEVTSEKANIGAAIGFVFGILSW 250

Query: 247 QLSQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSK 301
           Q++QG+QS+ ESSL+YAN+NALLLAKSLRGALLA+ YSS  LS FTT+GL+LL RQLK++
Sbjct: 251 QIAQGIQSIPESSLEYANDNALLLAKSLRGALLALFYSSTFLSGFTTIGLVLLGRQLKAE 310

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BLAST of CSPI01G32920 vs. TrEMBL
Match: A0A0D2VHB1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G188500 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.8e-103
Identity = 208/302 (68.87%), Postives = 242/302 (80.13%), Query Frame = 1


Query: 2   ASLHLLQPLTFLSS---HSVPLFSQYSNPISFRP-SFPKKPFPLKKSLTLSFALTESDSP 61
           +S  LL+PLTF S+       LF    N I F+  S   K   L K LT+ FALTESDSP
Sbjct: 7   SSFSLLKPLTFPSTPCPSPALLFHNNPNNIPFKTTSNHSKTLHLSKRLTIPFALTESDSP 66

Query: 62  KSLQPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEIL 121
           KSLQP+ + LL +LADSFDL  DYF +LP DLRLDLNDAAFDLSNGPV+DECG E+GE L
Sbjct: 67  KSLQPDLQTLLLQLADSFDLPTDYFSQLPNDLRLDLNDAAFDLSNGPVIDECGMELGETL 126

Query: 122 LNLSRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQ 181
           LNLSRAWE+ADTSTS+AL SK P L  SLTD+ K  FG+RL++AGRRFQ+MGQYGQGELQ
Sbjct: 127 LNLSRAWESADTSTSYALASKLPLLANSLTDSAKLAFGRRLVAAGRRFQAMGQYGQGELQ 186

Query: 182 KIAEVMNTTGKLLSALSTPKVAEE-PKIETRMFKFGELQVELTAEKANIGAAIGFVFGLI 241
           KIA+ +N  GKLLSA S     EE PK ETRMFKFGELQVE+T+EKANIGAAIGFVFG++
Sbjct: 187 KIAKAVNAAGKLLSASSISATTEEQPKTETRMFKFGELQVEVTSEKANIGAAIGFVFGIL 246

Query: 242 SWQLSQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLK 299
           SWQ++QG+QS+ ESSL+YAN+NALLLAKSLRGALLAV YSS +LS FTT+GL+LL RQLK
Sbjct: 247 SWQIAQGIQSIPESSLEYANDNALLLAKSLRGALLAVFYSSTILSVFTTIGLLLLGRQLK 306

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BLAST of CSPI01G32920 vs. TrEMBL
Match: V4VTL8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021307mg PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.2e-101
Identity = 208/297 (70.03%), Postives = 234/297 (78.79%), Query Frame = 1


Query: 7   LQPLTFLSS--HSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSLQPNP 66
           LQPL  LSS  H+  LF Q ++ I       K      K LT+ FALTESDSPKSLQP+ 
Sbjct: 11  LQPLNSLSSTSHNTLLFHQNTHYIPPLKVSAKPFLSSSKPLTVLFALTESDSPKSLQPDS 70

Query: 67  ELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNLSRAW 126
           + LLQELADSFDL  DY  +LPRDLRLDLNDAAFDLSNGPVVDECGQE+GE+LLNL+RAW
Sbjct: 71  QTLLQELADSFDLPSDYLAQLPRDLRLDLNDAAFDLSNGPVVDECGQELGELLLNLTRAW 130

Query: 127 EAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIAEVMN 186
           E AD+STSH+LV K P L  SLTDN KS FGKRLISAGRRFQ+MGQYGQGELQKIA+ M 
Sbjct: 131 EQADSSTSHSLVKKLPALESSLTDNAKSAFGKRLISAGRRFQAMGQYGQGELQKIAKAMT 190

Query: 187 TTGKLLSALS-TPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQLSQG 246
             GKLLSA S +  + E+PK ETRM KFGELQVE+T EKA IGAAIGFVFG++SW+L QG
Sbjct: 191 AAGKLLSASSISTTIDEQPKKETRMLKFGELQVEVTPEKAYIGAAIGFVFGILSWELGQG 250

Query: 247 VQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 301
           +QS  ESSLQYAN+NALLLAKSLRGALLA  YSS +LS FT +GL L  RQL SKE+
Sbjct: 251 IQSTPESSLQYANDNALLLAKSLRGALLAACYSSTLLSVFTVIGLFLYGRQLASKEK 307

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BLAST of CSPI01G32920 vs. TrEMBL
Match: A0A067EMP0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021800mg PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.2e-100
Identity = 206/297 (69.36%), Postives = 233/297 (78.45%), Query Frame = 1


Query: 7   LQPLTFLSS--HSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSLQPNP 66
           LQPL  LSS  H+  LF Q ++ I       K      K LT+ FALTESDSPKSLQP+ 
Sbjct: 11  LQPLNSLSSTSHNTLLFHQNTHYIPPLKVSAKPFLSSSKPLTVLFALTESDSPKSLQPDS 70

Query: 67  ELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNLSRAW 126
           + LLQELADSFDL  DY  +LPRDLRLDLNDAAFDLSNGPVVDECGQE+GE+LLNL+RAW
Sbjct: 71  QTLLQELADSFDLPSDYLAQLPRDLRLDLNDAAFDLSNGPVVDECGQELGELLLNLTRAW 130

Query: 127 EAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIAEVMN 186
           E AD+STSH+LV K P L  SLTDN KS FGKRLISAGRRFQ+MGQYGQGELQKIA+ M 
Sbjct: 131 EQADSSTSHSLVKKLPALESSLTDNAKSAFGKRLISAGRRFQAMGQYGQGELQKIAKAMT 190

Query: 187 TTGKLLSALS-TPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQLSQG 246
             GKLLSA S +  + E+PK ETR+ KFGELQVE+T EKA IGAAIGFVFG++SW+L QG
Sbjct: 191 AAGKLLSASSISTTIDEQPKKETRLLKFGELQVEVTPEKAYIGAAIGFVFGILSWELGQG 250

Query: 247 VQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 301
           +QS  ESSLQYAN+NALLLAKSLRGALLA  YSS +LS  T +GL L  RQL SKE+
Sbjct: 251 IQSTPESSLQYANDNALLLAKSLRGALLAACYSSTLLSVCTVIGLFLYGRQLASKEK 307

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BLAST of CSPI01G32920 vs. TAIR10
Match: AT5G37360.1 (AT5G37360.1 unknown protein)

HSP 1 Score: 340.5 bits (872), Expect = 1.1e-93
Identity = 194/305 (63.61%), Postives = 235/305 (77.05%), Query Frame = 1


Query: 2   ASLHLLQPLTFLSSHSVPLFSQYSNPIS--FRPSFPKKPFPLKKSLTLSFALTESDSPKS 61
           +S+ LLQPL  LSS ++  FSQ S   S   +P+  K+   L KSLTL FALTESDS K 
Sbjct: 7   SSISLLQPLHSLSSSTL-FFSQPSFHFSSSLKPNKSKR-HNLSKSLTLRFALTESDSTKP 66

Query: 62  LQ---PNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEI 121
           L+   P+ + LL +L+  FDL  DYF++LP DLRLDLNDAAFDLSNGPV+DECGQE+GE 
Sbjct: 67  LEIEEPSSKSLLLQLSKCFDLPSDYFQQLPNDLRLDLNDAAFDLSNGPVIDECGQELGET 126

Query: 122 LLNLSRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGEL 181
           LLNLSRAWE ADTSTS +LV K P L   LTD  +S FGKRLISAG+RFQ MGQY +GEL
Sbjct: 127 LLNLSRAWEQADTSTSRSLVEKLPELEILLTDGARSAFGKRLISAGKRFQGMGQYAKGEL 186

Query: 182 QKIAEVMNTTGKLLSA-LSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGL 241
           QKIA+ M TTG +LSA  S+  V+ E K  TRMFKFGELQV +T EKA  GAAI F++G+
Sbjct: 187 QKIAKAMITTGGVLSAKTSSVSVSNESKSGTRMFKFGELQVAVTPEKAYTGAAIAFIYGI 246

Query: 242 ISWQLSQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQL 301
           +SWQ+SQG+QS+ E+SLQYAN+NALL+ KSLRG+LLA+ Y+S VLS FTT GLILLA+QL
Sbjct: 247 LSWQISQGIQSIPENSLQYANDNALLIGKSLRGSLLALFYASTVLSGFTTAGLILLAKQL 306

[Close]

BLAST of CSPI01G32920 vs. NCBI nr
Match: gi|449449589|ref|XP_004142547.1| (PREDICTED: uncharacterized protein LOC101217511 [Cucumis sativus])

HSP 1 Score: 567.0 bits (1460), Expect = 2.0e-158
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 1


Query: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60
           MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL
Sbjct: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60

Query: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120
           QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL
Sbjct: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120

Query: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQL 240
           EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFG+ISWQL
Sbjct: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGVISWQL 240

Query: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300
           SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE
Sbjct: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300

[Close]

BLAST of CSPI01G32920 vs. NCBI nr
Match: gi|659086039|ref|XP_008443734.1| (PREDICTED: uncharacterized protein LOC103487250 isoform X1 [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 3.0e-151
Identity = 284/300 (94.67%), Postives = 292/300 (97.33%), Query Frame = 1


Query: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60
           MASLHLLQPLTFLSSHS PLFSQYSNPISFRPSFPK PFPLKKSLTLSFAL ESDSPKSL
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSNPISFRPSFPKNPFPLKKSLTLSFALAESDSPKSL 60

Query: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120
            P+P+LLLQELAD FDLSRDYFEKLPRDLRLDLNDAAFDLSNGPV+DECGQEMGEILLNL
Sbjct: 61  PPDPQLLLQELADGFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNL 120

Query: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQL 240
           EVMNTTGKLLSA STPKVAEEP+ ETRMFKFGELQVELTA+KANIGAAIGFVFG+ISWQL
Sbjct: 181 EVMNTTGKLLSASSTPKVAEEPQNETRMFKFGELQVELTADKANIGAAIGFVFGVISWQL 240

Query: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300
           SQGVQS+ ESSLQYANENALLLAKSLRGALLAVSY+SAVLSAFTTVGLILLARQLKSKEE
Sbjct: 241 SQGVQSIRESSLQYANENALLLAKSLRGALLAVSYTSAVLSAFTTVGLILLARQLKSKEE 300

[Close]

BLAST of CSPI01G32920 vs. NCBI nr
Match: gi|659086041|ref|XP_008443735.1| (PREDICTED: uncharacterized protein LOC103487250 isoform X2 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 1.7e-138
Identity = 269/300 (89.67%), Postives = 276/300 (92.00%), Query Frame = 1


Query: 1   MASLHLLQPLTFLSSHSVPLFSQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKSL 60
           MASLHLLQPLTFLSSHS PLFSQYSNPISFRPSFPK PFPLKKSLTLSFAL ESDSPKSL
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSNPISFRPSFPKNPFPLKKSLTLSFALAESDSPKSL 60

Query: 61  QPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLNL 120
            P+P+LLLQELAD FDLSRDYFEKLPRDLRLD                CGQEMGEILLNL
Sbjct: 61  PPDPQLLLQELADGFDLSRDYFEKLPRDLRLD----------------CGQEMGEILLNL 120

Query: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180
           SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA
Sbjct: 121 SRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKIA 180

Query: 181 EVMNTTGKLLSALSTPKVAEEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISWQL 240
           EVMNTTGKLLSA STPKVAEEP+ ETRMFKFGELQVELTA+KANIGAAIGFVFG+ISWQL
Sbjct: 181 EVMNTTGKLLSASSTPKVAEEPQNETRMFKFGELQVELTADKANIGAAIGFVFGVISWQL 240

Query: 241 SQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSKEE 300
           SQGVQS+ ESSLQYANENALLLAKSLRGALLAVSY+SAVLSAFTTVGLILLARQLKSKEE
Sbjct: 241 SQGVQSIRESSLQYANENALLLAKSLRGALLAVSYTSAVLSAFTTVGLILLARQLKSKEE 284

[Close]

BLAST of CSPI01G32920 vs. NCBI nr
Match: gi|590641756|ref|XP_007030320.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 386.3 bits (991), Expect = 4.7e-104
Identity = 205/302 (67.88%), Postives = 242/302 (80.13%), Query Frame = 1


Query: 7   LQPLTFLS--SHSVPLF-----SQYSNPISFRPSFPKKPFPLKKSLTLSFALTESDSPKS 66
           LQPLTF S  SHS  L      + + +  S R  F  K   L K  T+ FALTESDSPKS
Sbjct: 11  LQPLTFPSTPSHSPTLLFHQNLNYFPSKTSLRKPFNSKKLQLSKPQTIPFALTESDSPKS 70

Query: 67  LQPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEILLN 126
           L+PNP+ LLQE+ADSFDL  DYF +LP DLRLDLNDAAFDLSNGPV+DECG E+GE LLN
Sbjct: 71  LEPNPQTLLQEVADSFDLPSDYFSQLPGDLRLDLNDAAFDLSNGPVIDECGLELGETLLN 130

Query: 127 LSRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQKI 186
           +SRAWE ADTSTS  L SK P L  SLTDN KS FG+RL++AGRRFQ+MGQYGQGELQKI
Sbjct: 131 ISRAWEQADTSTSRTLASKLPLLGSSLTDNAKSAFGRRLVTAGRRFQAMGQYGQGELQKI 190

Query: 187 AEVMNTTGKLLSALSTPKVA-EEPKIETRMFKFGELQVELTAEKANIGAAIGFVFGLISW 246
           A+ M   GKLLSA+S    + E+PK+ETRM KFG+LQVE+T+EKANIGAAIGFVFG++SW
Sbjct: 191 AKAMTAAGKLLSAISVSATSDEQPKMETRMLKFGDLQVEVTSEKANIGAAIGFVFGILSW 250

Query: 247 QLSQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLKSK 301
           Q++QG+QS+ ESSL+YAN+NALLLAKSLRGALLA+ YSS  LS FTT+GL+LL RQLK++
Sbjct: 251 QIAQGIQSIPESSLEYANDNALLLAKSLRGALLALFYSSTFLSGFTTIGLVLLGRQLKAE 310

[Close]

BLAST of CSPI01G32920 vs. NCBI nr
Match: gi|823260211|ref|XP_012462827.1| (PREDICTED: uncharacterized protein LOC105782558 isoform X1 [Gossypium raimondii])

HSP 1 Score: 383.3 bits (983), Expect = 4.0e-103
Identity = 208/302 (68.87%), Postives = 242/302 (80.13%), Query Frame = 1


Query: 2   ASLHLLQPLTFLSS---HSVPLFSQYSNPISFRP-SFPKKPFPLKKSLTLSFALTESDSP 61
           +S  LL+PLTF S+       LF    N I F+  S   K   L K LT+ FALTESDSP
Sbjct: 7   SSFSLLKPLTFPSTPCPSPALLFHNNPNNIPFKTTSNHSKTLHLSKRLTIPFALTESDSP 66

Query: 62  KSLQPNPELLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVVDECGQEMGEIL 121
           KSLQP+ + LL +LADSFDL  DYF +LP DLRLDLNDAAFDLSNGPV+DECG E+GE L
Sbjct: 67  KSLQPDLQTLLLQLADSFDLPTDYFSQLPNDLRLDLNDAAFDLSNGPVIDECGMELGETL 126

Query: 122 LNLSRAWEAADTSTSHALVSKFPTLVQSLTDNYKSGFGKRLISAGRRFQSMGQYGQGELQ 181
           LNLSRAWE+ADTSTS+AL SK P L  SLTD+ K  FG+RL++AGRRFQ+MGQYGQGELQ
Sbjct: 127 LNLSRAWESADTSTSYALASKLPLLANSLTDSAKLAFGRRLVAAGRRFQAMGQYGQGELQ 186

Query: 182 KIAEVMNTTGKLLSALSTPKVAEE-PKIETRMFKFGELQVELTAEKANIGAAIGFVFGLI 241
           KIA+ +N  GKLLSA S     EE PK ETRMFKFGELQVE+T+EKANIGAAIGFVFG++
Sbjct: 187 KIAKAVNAAGKLLSASSISATTEEQPKTETRMFKFGELQVEVTSEKANIGAAIGFVFGIL 246

Query: 242 SWQLSQGVQSVSESSLQYANENALLLAKSLRGALLAVSYSSAVLSAFTTVGLILLARQLK 299
           SWQ++QG+QS+ ESSL+YAN+NALLLAKSLRGALLAV YSS +LS FTT+GL+LL RQLK
Sbjct: 247 SWQIAQGIQSIPESSLEYANDNALLLAKSLRGALLAVFYSSTILSVFTTIGLLLLGRQLK 306

The following BLAST results are available for this feature:

BLAST of CSPI01G32920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G32920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0A2_CUCSA	1.4e-158	99.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665900 PE=4 SV=1	[more]
A0A061F2B0_THECC	3.3e-104	67.88	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026127 PE=4 SV=1	[more]
A0A0D2VHB1_GOSRA	2.8e-103	68.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G188500 PE=4 SV=1	[more]
V4VTL8_9ROSI	1.2e-101	70.03	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021307mg PE=4 SV=1	[more]
A0A067EMP0_CITSI	2.2e-100	69.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021800mg PE=4 SV=1	[more]

BLAST of CSPI01G32920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37360.1	1.1e-93	63.61	unknown protein	[more]

BLAST of CSPI01G32920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449589\|ref\|XP_004142547.1\|	2.0e-158	99.67	PREDICTED: uncharacterized protein LOC101217511 [Cucumis sativus]	[more]
gi\|659086039\|ref\|XP_008443734.1\|	3.0e-151	94.67	PREDICTED: uncharacterized protein LOC103487250 isoform X1 [Cucumis melo]	[more]
gi\|659086041\|ref\|XP_008443735.1\|	1.7e-138	89.67	PREDICTED: uncharacterized protein LOC103487250 isoform X2 [Cucumis melo]	[more]
gi\|590641756\|ref\|XP_007030320.1\|	4.7e-104	67.88	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|823260211\|ref\|XP_012462827.1\|	4.0e-103	68.87	PREDICTED: uncharacterized protein LOC105782558 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000178	exosome (RNase complex)
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G32920.1	CSPI01G32920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36802	FAMILY NOT NAMED	coord: 28..300 score: 1.9E
None	No IPR available	PANTHER	PTHR36802:SF1	SUBFAMILY NOT NAMED	coord: 28..300 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G32920	Csa1G665900	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G32920	MELO3C010086	Melon (DHL92) v3.5.1	cpimeB062
CSPI01G32920	ClCG03G011490	Watermelon (Charleston Gray)	cpiwcgB041
CSPI01G32920	Lsi06G007620	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G32920	MELO3C010086.2	Melon (DHL92) v3.6.1	cpimedB056
CSPI01G32920	CsaV3_1G045040	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G32920	Cla97C03G061860	Watermelon (97103) v2	cpiwmbB035
CSPI01G32920	Bhi02G001066	Wax gourd	cpiwgoB113
CSPI01G32920	Cucsa.027610	Cucumber (Gy14) v1	cgycpiB584
CSPI01G32920	CmaCh10G010300	Cucurbita maxima (Rimu)	cmacpiB068
CSPI01G32920	CmoCh10G010870	Cucurbita moschata (Rifu)	cmocpiB061
CSPI01G32920	Cp4.1LG18g01040	Cucurbita pepo (Zucchini)	cpecpiB360
CSPI01G32920	CsGy1G031700	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G32920	Carg25508	Silver-seed gourd	carcpiB0309

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G32920	Cucurbita maxima (Rimu)	cmacpiB084
CSPI01G32920	Cucurbita moschata (Rifu)	cmocpiB078
CSPI01G32920	Melon (DHL92) v3.5.1	cpimeB044
CSPI01G32920	Watermelon (97103) v1	cpiwmB013
CSPI01G32920	Melon (DHL92) v3.6.1	cpimedB038
CSPI01G32920	Silver-seed gourd	carcpiB0949