Carg25459 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCTCCGGCGTCGACCCCAGGCAGCCCAAGACAATATCCTCAGCCTTCCACTACTTTCAGCCGTTGACGGAGTTCTTGGCCGGTTTGCCCTCCGGCGAGAGGGTGGTCCTCGTCGGCCACAGCTTCGGCGGGCTGGGAGTTGCCGTTGCTTTGGAGGAATTCCCGGAAAAGATCTCTGTTGGTGTCTTTGTCGCTGCCTCCATGGCTGGTCCCAATCTCAGTGTTTCCACCGTTGGTGCCGAGGTAAATTTTTAGAATGAGTCCGCTAAGGAAATGTTTCCAGGTAATTATTAATTTTACTCCTCAACTAACATGAAATTTCACAATTCAATTCACTCTCTTCGGGACCCAGCGTCCTAGCTAGCATTCGTCACAATCTACCTCCTTCGTGCCTATGTCCTTGCTGGCACTAGTTCCCTTTTCCGGTTGATGTGAGACTCCCCAATCTACTCTCTTCGAGGCCCAGCGTCCTCGTTGGTACGTCGCTCGATGTCCGACTCTAATACTATTTGTAATAGTCTAAAACCCACAGCTAGCAAATATTGTCTTTTTTGGGTTTTCTCTTCCGGGCTTCCTCTAGAGGTTTTCACACTCTTATCAAGAATGTTTCGTTCTCCTCTCCAACTGATTACACTTATTACAGATTCAATAGGTTCCGATTAAATTTTGAACTTTTTTAATGGCCAAATTGATGATAAATTGTTTTGAATAACTTTATGTTTTTGATACTTAACTTAGTGTCAACCTACAACACAACCTAAACCAATCGGCTCATAAATTGGCGAATTTGACACGAAGTTTGGATTATTGATATACTCTATTACCTTTTGTCTTTGTTTCGAATGATATTATGTTTCGTTAACCATAATTATTCTCGAAAAATTTATTAAAATATTGGACATAAAATCGACATAGTAATAACCTATACTGATGGCTAGACATTTGCTTAGATTAAACTTTTCTTTGTTGTTGCTATATTCACAAACTGAATGACGAAAAGGAACGATCTCCACCGTTGGACAGTCATAATGTGTACGAAAATGGAGAGGACAAGCCTCCAACGTCTTATATTTTGGGTCCTTTGAAGTTGGCAAAACATCTCTACTCACTCTCACCACCCGAGGTAATCTCCTTCACTTATCTAATTCAATATGTTTGAACTGACTTTTTAACCGAAATAATTTTTAAGCACTTAAAAAACCAATTGAAAAAGACTCTTAAAACTTTACGACATGTGTGTAACATGCAGGATTTGTCATTGGCAATCACATTGGTGAGACCTTTTCCACTATTGAAAATCAATGATTCTGAGTTCAAGTTCACAGAAGAAAGATATGGGTCTGTGAAAAGGGCTTACGTTATTACAGAGAGATGA ATGGCCGCCTCCGGCGTCGACCCCAGGCAGCCCAAGACAATATCCTCAGCCTTCCACTACTTTCAGCCGTTGACGGAGTTCTTGGCCGGTTTGCCCTCCGGCGAGAGGGTGGTCCTCGTCGGCCACAGCTTCGGCGGGCTGGGAGTTGCCGTTGCTTTGGAGGAATTCCCGGAAAAGATCTCTGTTGGTGTCTTTGATTTGTCATTGGCAATCACATTGGTGAGACCTTTTCCACTATTGAAAATCAATGATTCTGAGTTCAAGTTCACAGAAGAAAGATATGGGTCTGTGAAAAGGGCTTACGTTATTACAGAGAGATGA ATGGCCGCCTCCGGCGTCGACCCCAGGCAGCCCAAGACAATATCCTCAGCCTTCCACTACTTTCAGCCGTTGACGGAGTTCTTGGCCGGTTTGCCCTCCGGCGAGAGGGTGGTCCTCGTCGGCCACAGCTTCGGCGGGCTGGGAGTTGCCGTTGCTTTGGAGGAATTCCCGGAAAAGATCTCTGTTGGTGTCTTTGATTTGTCATTGGCAATCACATTGGTGAGACCTTTTCCACTATTGAAAATCAATGATTCTGAGTTCAAGTTCACAGAAGAAAGATATGGGTCTGTGAAAAGGGCTTACGTTATTACAGAGAGATGA MAASGVDPRQPKTISSAFHYFQPLTEFLAGLPSGERVVLVGHSFGGLGVAVALEEFPEKISVGVFDLSLAITLVRPFPLLKINDSEFKFTEERYGSVKRAYVITER
BLAST of Carg25459 vs. NCBI nr
Match: XP_008444767.1 (PREDICTED: salicylic acid-binding protein 2-like [Cucumis melo]) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32 Identity = 84/168 (50.00%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Carg25459 vs. NCBI nr
Match: XP_022139855.1 (salicylic acid-binding protein 2-like [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 6.3e-31 Identity = 83/168 (49.40%), Postives = 91/168 (54.17%), Query Frame = 0
BLAST of Carg25459 vs. NCBI nr
Match: XP_022139987.1 (methylesterase 3-like [Momordica charantia]) HSP 1 Score: 133.7 bits (335), Expect = 3.8e-28 Identity = 77/168 (45.83%), Postives = 88/168 (52.38%), Query Frame = 0
BLAST of Carg25459 vs. NCBI nr
Match: XP_023001470.1 (LOW QUALITY PROTEIN: putative inactive methylesterase 20 [Cucurbita maxima]) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg25459 vs. NCBI nr
Match: EEF40035.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Carg25459 vs. TAIR10
Match: AT2G23620.1 (methyl esterase 1) HSP 1 Score: 77.4 bits (189), Expect = 5.9e-15 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Carg25459 vs. TAIR10
Match: AT3G50440.1 (methyl esterase 10) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Carg25459 vs. TAIR10
Match: AT2G23590.1 (methyl esterase 8) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-14 Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of Carg25459 vs. TAIR10
Match: AT2G23600.1 (acetone-cyanohydrin lyase) HSP 1 Score: 73.6 bits (179), Expect = 8.5e-14 Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Carg25459 vs. TAIR10
Match: AT5G10300.1 (methyl esterase 5) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
BLAST of Carg25459 vs. Swiss-Prot
Match: sp|Q8S8S9|MES1_ARATH (Methylesterase 1 OS=Arabidopsis thaliana OX=3702 GN=MES1 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Carg25459 vs. Swiss-Prot
Match: sp|Q8S9K8|MES10_ARATH (Methylesterase 10 OS=Arabidopsis thaliana OX=3702 GN=MES10 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.2e-13 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Carg25459 vs. Swiss-Prot
Match: sp|O80475|MES8_ARATH (Methylesterase 8 OS=Arabidopsis thaliana OX=3702 GN=MES8 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.8e-13 Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of Carg25459 vs. Swiss-Prot
Match: sp|P52704|HNL_HEVBR ((S)-hydroxynitrile lyase OS=Hevea brasiliensis OX=3981 GN=HNL PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Carg25459 vs. Swiss-Prot
Match: sp|P52705|HNL_MANES ((S)-hydroxynitrile lyase OS=Manihot esculenta OX=3983 GN=HNL PE=1 SV=3) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Carg25459 vs. TrEMBL
Match: tr|A0A1S3BAM5|A0A1S3BAM5_CUCME (salicylic acid-binding protein 2-like OS=Cucumis melo OX=3656 GN=LOC103488011 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32 Identity = 84/168 (50.00%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Carg25459 vs. TrEMBL
Match: tr|B9S8N2|B9S8N2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0603100 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Carg25459 vs. TrEMBL
Match: tr|A0A2I0LCM5|A0A2I0LCM5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001173 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18 Identity = 55/123 (44.72%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Carg25459 vs. TrEMBL
Match: tr|A0A2N9FY41|A0A2N9FY41_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20015 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17 Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 0
BLAST of Carg25459 vs. TrEMBL
Match: tr|A0A2N9HDA7|A0A2N9HDA7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37767 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17 Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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