CSPI01G24640 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G24640
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptionacetone-cyanohydrin lyase
LocationChr1 : 20034650 .. 20034992 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGTGGTCGGCGATCCCACAAAAAAGAAGACCCACTTTGTGCTTGTTCATGGATCTTTCCATGGCGCTTGGTCATGGTACAAGCTCTCCACCATTCTCCAATCGTGGGGCCACAACGTCACCGCCCTCGACATGGCTGCCTCCAGGCGTCGACCCCATACAGCCTAAGACTATATCCTCAGCCTTTCAGTACTTTCACCCCTTGATGGAGTTCTTGGCTGGTTTGTCCTCCGACGAGAGGGTGGTCCTCATTGGCCACAGCTTCGGCGGCAATGGAGGATTTCCCAGAGAAGATCTCTGTTGGTGTCTTTGTCACCGCCACCATGCCTGGTCCCAATCTTAG

mRNA sequence

ATGGATCTTTCCATGGCGCTTGGTCATGGTACAAGCTCTCCACCATTCTCCAATCGTGGGGCCACAACGTCACCGCCCTCGACATGGCTGCCTCCAGGCGTCGACCCCATACAGCCTAAGACTATATCCTCAGCCTTTCAGTACTTTCACCCCTTGATGGAGTTCTTGGCTGGTTTGTCCTCCGACGAGAGGGTGGTCCTCATTGGCCACAGCTTCGGCGGCAATGGAGGATTTCCCAGAGAAGATCTCTGTTGGTGTCTTTGTCACCGCCACCATGCCTGGTCCCAATCTTAG

Coding sequence (CDS)

ATGGATCTTTCCATGGCGCTTGGTCATGGTACAAGCTCTCCACCATTCTCCAATCGTGGGGCCACAACGTCACCGCCCTCGACATGGCTGCCTCCAGGCGTCGACCCCATACAGCCTAAGACTATATCCTCAGCCTTTCAGTACTTTCACCCCTTGATGGAGTTCTTGGCTGGTTTGTCCTCCGACGAGAGGGTGGTCCTCATTGGCCACAGCTTCGGCGGCAATGGAGGATTTCCCAGAGAAGATCTCTGTTGGTGTCTTTGTCACCGCCACCATGCCTGGTCCCAATCTTAG
Homology
[Close]
BLAST of CSPI01G24640 vs. TAIR10
Match: AT5G58310.1 (AT5G58310.1 methyl esterase 18)

HSP 1 Score: 47.4 bits (111), Expect = 6.0e-06
Identity = 19/42 (45.24%), Postives = 28/42 (66.67%), Query Frame = 1 

Query: 33 GVDPIQPKTISSAFQYFHPLMEFLAGLSSDERVVLIGHSFGG 75
          G++P  P T+SS   Y  PL  FL+ L +D++V+L+ HS GG
Sbjct: 42 GINPTDPNTVSSLDDYDEPLYAFLSQLPNDQKVILVSHSVGG 83

[Close]
BLAST of CSPI01G24640 vs. TAIR10
Match: AT2G23600.1 (AT2G23600.1 acetone-cyanohydrin lyase)

HSP 1 Score: 47.0 bits (110), Expect = 7.8e-06
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 

Query: 33 GVDPIQPKT-ISSAFQYFHPLMEFLAGLSSDERVVLIGHSFGG 75
          G+D  +  T IS+  QY  PLM+ +  L +DE+VVL+GHSFGG
Sbjct: 46 GIDTTRSITDISTCEQYSEPLMQLMTSLPNDEKVVLVGHSFGG 88

[Close]
BLAST of CSPI01G24640 vs. NCBI nr
Match: gi|659068505|ref|XP_008444767.1| (PREDICTED: salicylic acid-binding protein 2-like [Cucumis melo])

HSP 1 Score: 85.5 bits (210), Expect = 5.6e-14
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1 

Query: 33  GVDPIQPKTISSAFQYFHPLMEFLAGLSSDERVVLIGHSFGGNG 77
           G+DPIQPKT+SSAFQYFHPL EFLAGL SDERVVL+GHSFGG G
Sbjct: 73  GIDPIQPKTVSSAFQYFHPLTEFLAGLPSDERVVLVGHSFGGIG 116

The following BLAST results are available for this feature:
BLAST of CSPI01G24640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G24640 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI01G24640 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58310.16.0e-0645.24 methyl esterase 18[more]
AT2G23600.17.8e-0651.16 acetone-cyanohydrin lyase[more]
BLAST of CSPI01G24640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068505|ref|XP_008444767.1|5.6e-1486.36PREDICTED: salicylic acid-binding protein 2-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G24640.1CSPI01G24640.1mRNA