Carg25024 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25024
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Hypoxia-responsive family protein
Location	Cucurbita_argyrosperma_scaffold_176 : 167949 .. 169923 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCCCCACCGCCCACAGAATTTGGGGCGTTCCACAATTTCGCCTCTTCTTCCTTTCTCCTATAAATTTCCCGATGTGAAAACTGCCATTTCTCCATATCCGTAAACTCTGCTGCATTTTCTCTCCCTTTTCCTTTGCCGATCTCTGTTCCTGTTATCCATGGCGGAATCCAAGGGCAAACTCGAATCTCTTAGGGAGTGGGTTTCTGAGCACAAGCTTCGTACCGTCGGTAAATCTACGTTTTCAATCCTCTTGTCTATTTTATTTTCCTGATTTCCGATTGCTTGTTATGTTTCGATTTTGTGTTCTGATTGCATGTTGTTGTTGTTGTTTGGGGTGAAGGATCTCTGTGGCTTAGCGGGATTGCGGGTTCTATTGCCTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCATGCTAGGTGCGTTTCTGGCTTATTGTGTTTTTTTTTTCCTTAATCCTGGATTTTGGCTTTTGCTCTAGTGCTGCCTATTTATGAAGATTTTATTATGGAATGAATCTGTGGATTAACCTTATTGGATGGAAGTCTGTAAAAATCATCCCTCTTTTGGGGATCTGGCTGGAGTTTTGAAATCTTGAGGATGTTCTAGAGTTAATCCTGATAAAACAGAGATTATTTTCCCCTAAATTTGTTTGAAGCGATGTTTTGGATGGCTTGGAAAGCTTAATTTTGTTGTGTTCTTGATTATTAAGTCCATGAATTTGTTAGTAGAACAACTTTAATCTCTCTTATATAAAAGCAAAAGAACAAACGGCGCTGCATGATCATGTTTTTCGTTAAATTTTCGTTCTAGACTCTGAAAACTATCCTATGATTGAGTGCTTCGTTTTCCTGATGAACGCCAAAACATTCTTAGCTTCTGTGCTCTTGTGACCTTCCTGTTAGGAATCAACTCTCCCCAATGGCATGATATTGTCCACTTTGAGCACAAGCTTTGCTTTGGGCTTCCCCTAAACGCCTTATTACCAATGGAGATGTATTCCTTACTTATAAACCCATGATCATTCCCTAAATTAGCCAATGTACTGTTTCTAATTGGAATGGCCCACACAAGATTTCTTGGTAAATTGTCACTATTCTACGTATAGCATCAGCTTAGATTAGAGGGCATTTTTTTTAAGGATTCATTGTCCCTAGGCTGTTCTCTGGCCATCCTTGAACATTTATTTTCATCATATTTGGGTATATGATCCTATGTTACTAATCGTCTTTGGTCTATTCAGTCTTTTAAATGTCGTGTCTAATTATACTTTCTTTGTTTGTGTTCAATAATTCTTACATCTTGCTCAATGGTTTACCTAAGCCTAAGTTGATGTTTCATGTATCAATGTATCATCTCTGATAACAATTCGCGTGCACGTTTGACAATTACTATTGAGATTTCAAACATAGATGATCAAAATGAGAAATTTGACATAAGTTTGAGGACCAAAATTGCATTTAACTAAACCAAATGTTTTATGTTTTACCTTCGTCTTTATTTAAGGGGCATTGTGTTTGCCATGTTCTCGTGTATGAGGTCTGATGTTGATGTGCTGGGTTGTTGAAAATGGCTATCAGGTTGCACGCACAGGCTTTGACCCTGGCTGCTCTAGCAGGCGCTGCCGTGGTGGAATATTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAATTCCTTCCAATTGATAACTACTCAAGGAAGGACTAAGTTTTGTTTTGTGTGTTTGTGTACGTACACAGGAGGGAAGGGGTAATAAATTAGTTTCATTCTCATTCTGAGGCTTAGAAATCAATGTTACTTGTCCATTCTTTTGTAGTATGCAAATATGATGAATATAAGCAATTTGTTTGTGAACCTTCTTAGAGGTGAATGAATGAATGGATGAATGGTGTTGTATTATGAACCAAATGTTGGTGGGTCTGTGAGAAGCTCTGCCCTGTTTGATCTTTCCC

mRNA sequence

CGCCCCCACCGCCCACAGAATTTGGGGCGTTCCACAATTTCGCCTCTTCTTCCTTTCTCCTATAAATTTCCCGATGTGAAAACTGCCATTTCTCCATATCCGTAAACTCTGCTGCATTTTCTCTCCCTTTTCCTTTGCCGATCTCTGTTCCTGTTATCCATGGCGGAATCCAAGGGCAAACTCGAATCTCTTAGGGAGTGGGTTTCTGAGCACAAGCTTCGTACCGTCGGATCTCTGTGGCTTAGCGGGATTGCGGGTTCTATTGCCTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCATGCTAGGTTGCACGCACAGGCTTTGACCCTGGCTGCTCTAGCAGGCGCTGCCGTGGTGGAATATTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAATTCCTTCCAATTGATAACTACTCAAGGAAGGACTAAGTTTTGTTTTGTGTGTTTGTGTACGTACACAGGAGGGAAGGGGTAATAAATTAGTTTCATTCTCATTCTGAGGCTTAGAAATCAATGTTACTTGTCCATTCTTTTGTAGTATGCAAATATGATGAATATAAGCAATTTGTTTGTGAACCTTCTTAGAGGTGAATGAATGAATGGATGAATGGTGTTGTATTATGAACCAAATGTTGGTGGGTCTGTGAGAAGCTCTGCCCTGTTTGATCTTTCCC

Coding sequence (CDS)

ATGGCGGAATCCAAGGGCAAACTCGAATCTCTTAGGGAGTGGGTTTCTGAGCACAAGCTTCGTACCGTCGGATCTCTGTGGCTTAGCGGGATTGCGGGTTCTATTGCCTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCATGCTAGGTTGCACGCACAGGCTTTGACCCTGGCTGCTCTAGCAGGCGCTGCCGTGGTGGAATATTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAATTCCTTCCAATTGATAACTACTCAAGGAAGGACTAA

Protein sequence

MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD

Homology

[Close]

BLAST of Carg25024 vs. NCBI nr
Match: XP_022924720.1 (uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 uncharacterized protein LOC111469164 [Cucurbita maxima] >XP_023530300.1 uncharacterized protein LOC111792905 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 9.8e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of Carg25024 vs. NCBI nr
Match: XP_022145879.1 (uncharacterized protein LOC111015231 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-46
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of Carg25024 vs. NCBI nr
Match: XP_022961523.1 (uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 uncharacterized protein LOC111779972 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-46
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLP+DNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD 98

[Close]

BLAST of Carg25024 vs. NCBI nr
Match: XP_022968827.1 (uncharacterized protein LOC111467946 [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-45
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of Carg25024 vs. NCBI nr
Match: XP_004135606.1 (PREDICTED: uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622.1 PREDICTED: uncharacterized protein LOC103492155 [Cucumis melo] >KGN66059.1 hypothetical protein Csa_1G569360 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 9.2e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE KGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAEPKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS K+
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKE 98

[Close]

BLAST of Carg25024 vs. TAIR10
Match: AT3G05550.1 (Hypoxia-responsive family protein)

HSP 1 Score: 151.0 bits (380), Expect = 3.9e-37
Identity = 77/98 (78.57%), Postives = 83/98 (84.69%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          M ESK K E +R+WVS+HKLRTVG LWLSGI GSIAYNWSQP MKTSVKIIHARLHAQAL
Sbjct: 1  MVESKTKFEEIRKWVSDHKLRTVGCLWLSGITGSIAYNWSQPAMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYY+HK+ A   RY KFLP +N S KD
Sbjct: 61 TLAALAGAAVVEYYDHKTEA-TNRYPKFLPPENLSHKD 97

[Close]

BLAST of Carg25024 vs. TAIR10
Match: AT5G27760.1 (Hypoxia-responsive family protein)

HSP 1 Score: 141.0 bits (354), Expect = 4.0e-34
Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE K K+  +REW+ EHKLRTVG LWLSGI+GSIAYNWS+P MKTSV+IIHARLHAQAL
Sbjct: 1  MAEPKTKVAEIREWIIEHKLRTVGCLWLSGISGSIAYNWSKPAMKTSVRIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSR 97
          TLAALAGAA VEYY+HKSGA  +R  KFL  DN ++
Sbjct: 61 TLAALAGAAAVEYYDHKSGA-TDRIPKFLKPDNLNK 95

[Close]

BLAST of Carg25024 vs. TrEMBL
Match: tr|A0A1S3BP02|A0A1S3BP02_CUCME (uncharacterized protein LOC103492155 OS=Cucumis melo OX=3656 GN=LOC103492155 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.1e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE KGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAEPKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS K+
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKE 98

[Close]

BLAST of Carg25024 vs. TrEMBL
Match: tr|A0A0A0LYG3|A0A0A0LYG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569360 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.1e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE KGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAEPKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS K+
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKE 98

[Close]

BLAST of Carg25024 vs. TrEMBL
Match: tr|A0A2I4GD52|A0A2I4GD52_9ROSI (uncharacterized protein LOC109006845 OS=Juglans regia OX=51240 GN=LOC109006845 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.7e-40
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLES+REWV EHKLRTVGSLWLSG+AGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESMREWVVEHKLRTVGSLWLSGLAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS 96
          TLAALAGAAVVE+Y+HK+ AKAERY KF P+D YS
Sbjct: 61 TLAALAGAAVVEWYDHKTEAKAERYTKFFPVDAYS 95

[Close]

BLAST of Carg25024 vs. TrEMBL
Match: tr|A0A2I4H1K9|A0A2I4H1K9_9ROSI (uncharacterized protein LOC109012704 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012704 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39
Identity = 83/98 (84.69%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESK K ES+R WV EHKLRTVG LWLSG+AGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKSKAESIRGWVVEHKLRTVGCLWLSGLAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVE+Y+HK+GAKA+RYAKFLP+D +S KD
Sbjct: 61 TLAALAGAAVVEWYDHKTGAKADRYAKFLPVDTFSHKD 98

[Close]

BLAST of Carg25024 vs. TrEMBL
Match: tr|A0A067EMC0|A0A067EMC0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034303mg PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.8e-39
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE K KLES+REWV ++KLRTVGSLWLSGIAGSIAYNWSQP MKTSVKIIHARLHAQAL
Sbjct: 1  MAEHKSKLESVREWVVQNKLRTVGSLWLSGIAGSIAYNWSQPGMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 99
          TLAALAGAAVVEYY+HKSG+K ERYAKFLP D Y+ KD
Sbjct: 61 TLAALAGAAVVEYYDHKSGSKTERYAKFLPADPYAHKD 98

The following BLAST results are available for this feature:

BLAST of Carg25024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924720.1	9.8e-47	100.00	uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 unchar...	[more]
XP_022145879.1	3.7e-46	98.98	uncharacterized protein LOC111015231 [Momordica charantia]	[more]
XP_022961523.1	4.9e-46	97.96	uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 unchar...	[more]
XP_022968827.1	3.2e-45	96.94	uncharacterized protein LOC111467946 [Cucurbita maxima]	[more]
XP_004135606.1	9.2e-45	95.92	PREDICTED: uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622....	[more]

BLAST of Carg25024 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05550.1	3.9e-37	78.57	Hypoxia-responsive family protein	[more]
AT5G27760.1	4.0e-34	73.96	Hypoxia-responsive family protein	[more]

BLAST of Carg25024 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25024 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP02\|A0A1S3BP02_CUCME	6.1e-45	95.92	uncharacterized protein LOC103492155 OS=Cucumis melo OX=3656 GN=LOC103492155 PE=...	[more]
tr\|A0A0A0LYG3\|A0A0A0LYG3_CUCSA	6.1e-45	95.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569360 PE=4 SV=1	[more]
tr\|A0A2I4GD52\|A0A2I4GD52_9ROSI	7.7e-40	88.42	uncharacterized protein LOC109006845 OS=Juglans regia OX=51240 GN=LOC109006845 P...	[more]
tr\|A0A2I4H1K9\|A0A2I4H1K9_9ROSI	1.3e-39	84.69	uncharacterized protein LOC109012704 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A067EMC0\|A0A067EMC0_CITSI	3.8e-39	85.71	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034303mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007667	Hypoxia_induced_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25024-RA	Carg25024-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007667	Hypoxia induced protein, domain	PFAM	PF04588	HIG_1_N	coord: 17..67 e-value: 3.7E-10 score: 39.8
IPR007667	Hypoxia induced protein, domain	PROSITE	PS51503	HIG1	coord: 1..83 score: 21.037
None	No IPR available	PANTHER	PTHR28018	FAMILY NOT NAMED	coord: 2..97
None	No IPR available	PANTHER	PTHR28018:SF1	SUBFAMILY NOT NAMED	coord: 2..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25024	Cla005194	Watermelon (97103) v1	carwmB0235
Carg25024	Csa1G569360	Cucumber (Chinese Long) v2	carcuB0273
Carg25024	MELO3C015302	Melon (DHL92) v3.5.1	carmeB0249
Carg25024	ClCG03G017350	Watermelon (Charleston Gray)	carwcgB0238
Carg25024	CSPI01G26420	Wild cucumber (PI 183967)	carcpiB0277
Carg25024	Cucsa.181870	Cucumber (Gy14) v1	carcgyB0290
Carg25024	CmaCh11G011420	Cucurbita maxima (Rimu)	carcmaB0342
Carg25024	CmaCh10G011250	Cucurbita maxima (Rimu)	carcmaB0341
Carg25024	CmoCh11G011850	Cucurbita moschata (Rifu)	carcmoB0346
Carg25024	CmoCh10G012040	Cucurbita moschata (Rifu)	carcmoB0345
Carg25024	Lsi06G001070	Bottle gourd (USVL1VR-Ls)	carlsiB221
Carg25024	Cp4.1LG18g00460	Cucurbita pepo (Zucchini)	carcpeB0346
Carg25024	Cp4.1LG04g00390	Cucurbita pepo (Zucchini)	carcpeB0347
Carg25024	CsGy1G025680	Cucumber (Gy14) v2	carcgybB0260
Carg25024	MELO3C015302.2	Melon (DHL92) v3.6.1	carmedB0258
Carg25024	CsaV3_1G038780	Cucumber (Chinese Long) v3	carcucB0276
Carg25024	Cla97C03G067710	Watermelon (97103) v2	carwmbB0252
Carg25024	Bhi02G001725	Wax gourd	carwgoB0314

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25024	Watermelon (Charleston Gray)	carwcgB0239
Carg25024	Watermelon (97103) v1	carwmB0236
Carg25024	Watermelon (97103) v2	carwmbB0253