Carg24970 (gene) Silver-seed gourd

Overview
NameCarg24970
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_234 : 338703 .. 343322 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCGTGATTACTGGTGAAGAAAACGAAACTTGAGGTATGTCTAAAATTTTGTCTCCACTTGTTTTCTTTTAATATCTAAGCTTTTGTCAGGTTTGGACATGTTCATAAATTGCTATAATTTATATTCCTCATTCCCATTAAAAATTGAATTACAAATTAGGTTGGCGCTGAATTATATGTTTTATCTTGTGATGTTATGAAAATTTCTCCTTATATTCCTGGTCTTTGTTTTTGTTCTTTTATTTTAATTCGTGGTCTTCGTTCTCATTTCATTGTTGCATTTGCATCTTGTTCAAAGTTTGGTTAGACATCGAAATTATCTTATTCATTGAAACCTATTTTTTTTTATTTATTGAAATCCATGTTTAGAGTTTGGCTAGAGGTTGAATTACCTCTTGCTCGATGTACTCTAAATTTCTGAATAGAAGTAGCACGGACTATCTGTCATTACCTAAAAAGGGGAGAAATTTTGTGATCACCTCCTAGTTGAAACCGTATGTGTACTTGATCGTAGTGTCAAGTAATAAGTGGCATTCTCAGTGCAATATTCTAAATGGTAACGTGTTGTCATCCACTCATTTTCAATTTATTGAGACTGATAATGCCTCCTCGAGGTGTACTGATTGGTAATGATGTCTTGTCTAAAGTGACATACCTAAAAAAAAGAAAAAAAAAAAAAAAAAGGAAAAAGGAAAAAAAAAGAAAACGGAAATCAAGTTGAGTAATATATGATTTTGGTACTTTGTATAGGATCCTGGATTTTGCAAAAGTAAGAACTTTCTATTGTAAGGTAATAAACGGTCCATATTCCTTTATGGTGGATTTATGCTTTTAAAAGGCTTCATCACGGTGACCCATTAGCTCCATTTCTATTTTTGCTAGTTGGAGAAGTTCTAAGCGGACGCATGGATAAAGGTATGTCTATGACGGTTTTAAAGGCTTTTTTGTTGGCAAAGATGGGATTCTTACAAGAAATAATTTTTCATCGATGAAATGAAAAATCACAGAGAAATATGGAAAATTTTTAACAGAAGAAATGACAACTAAGGCTATCGGATCATCTTACAACACTGACCAAAACAAACTATACTAACTCTTGATCAAATAGAAAAACTTAACAAAAAACAAAAACTAGGAAAGCACACTATGATGTCAACAACTGTAAGTTTCAAACTCTCAAACCACCAGCAGCAGCTTTCTTTCGAGCTCCCTCATTAGTCAAAACAAACTGCCGACAGCAAAAACTCTTCCTTCCAAAACAATGGATCAGACATTGCAACTTGAGCACCATCTACTTGTGGAACCAACAACAAATAGAGAAAACCGTACTTGAAGAACTCTCAAGAATTTGTAAAACTCAAATGGAAGACAATAACTTAAATGATCTTTTGCCTCGTAAACTTTGAAACAATTTTGAGACCTTTTCAGGCTTCAAGGTAAATCAAACAAATTCATGGTGAGCAATATCAACCTAAGCAACATAAGATAACATGGTTCATAAAGTGCGTGAATTTTGAACCTCTACCATCGGGGGGGTAATTTTGAAAAGAAAGATGTGTTGATAGATGAAGGATTTTGGTTTGTCTAGGGGAGGGATGGTGCTTTGTAATGTCATTCTTACAAATTTCATAATGTTCTGGCTTTGGCTTAATGAATCCTTACTCTTCTAATATTCTGTCATTTGCAAACAATACCAATAGAGAGTTCTCTTCATTAGGGAATGTCATGGATTATCTCTTCTTTGTTGCCTAGGTAAGGAGAAAATGTGTGTGAGAGAGAGGGGTGAGTAGGAGGGTGGGGATGGAAATGGATGGCATTCCTAGTCGGGGAAGATAAAAGTGGAATCTAAGGATTAAAAGAACTCCTCGATGTAAGATTTATGGGGAAGTAGATTAAATATTAAGCGAAGAAGTAGAGTTGTGACTTCAATTTTTATCCAATTGGTCTCAGCTATTGGACCTATCGTTTAACAATAAAGGTGTTGTGGTTGAATTTTTCCTGATCGGTTCACATGGAGTAAACTTGAGTAACTTCATACTTGAGGCGAGGTGGAACATAAGCAAAAAGCATGACGCTCAAGTGGTTGAAAAGAGAACTATGGGTTTTGTAGGAGACATTGCGTTAATATGCTTGCTTTCTAATCATCAAAATTGTTCATACTGTTCATATTTTTATAAAGTGGCCTCTTAAGTTTCCTAATCATCTCATTGATCTTTGTTTAGATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAGCTTTTTTAGTAGGTATTTCTCATCTTCCCCTCTGGCTATTGTAGAAGCACTATGACAGATAAATGCACAACTCTCATTGCATATGCATCTTCTGCAGCTCCATTACCATGTTCAAAAGGGTGTCGAGGTTCAAAATTAACAGAAAGTTCAAAATTACTATTCCCAGGCAAAGTCACCGAACTCTCACACTTGGTGGAGGCTTAGGCTTGAGAATGTATGGAACAAACCGTTGATGGCTTGTGCCTGGGCTCGGATCAAACCTAAACTATTCTTCCTAAACTGCAGCTATTATTTCTCGACATCTCTTATTTACTTAGTAATGTAATCACCATTATCAATAACCCCAATTTTGATGTAGCAAGATAACTAGTGATAGACAAATTGGAGCCAAGCAGTCGGTCAAACTAAACAAAAGTCGAATTGAACAAATTCTATTTTGTTTTCCCAATGATTTATTGGTTCAATTCTATGTACTATTTTATATTTGGATTGGTTTGATCAAAGTTCTATAGAG

mRNA sequence

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAGCTTTTTTAGTAGGTATTTCTCATCTTCCCCTCTGGCTATTGTAGAAGCACTATGACAGATAAATGCACAACTCTCATTGCATATGCATCTTCTGCAGCTCCATTACCATGTTCAAAAGGGTGTCGAGGTTCAAAATTAACAGAAAGTTCAAAATTACTATTCCCAGGCAAAGTCACCGAACTCTCACACTTGGTGGAGGCTTAGGCTTGAGAATGTATGGAACAAACCGTTGATGGCTTGTGCCTGGGCTCGGATCAAACCTAAACTATTCTTCCTAAACTGCAGCTATTATTTCTCGACATCTCTTATTTACTTAGTAATGTAATCACCATTATCAATAACCCCAATTTTGATGTAGCAAGATAACTAGTGATAGACAAATTGGAGCCAAGCAGTCGGTCAAACTAAACAAAAGTCGAATTGAACAAATTCTATTTTGTTTTCCCAATGATTTATTGGTTCAATTCTATGTACTATTTTATATTTGGATTGGTTTGATCAAAGTTCTATAGAG

Coding sequence (CDS)

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAG

Protein sequence

MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSLQSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCHYMLPCSRAVSEG
Homology
[Close]
BLAST of Carg24970 vs. NCBI nr
Match: XP_022994138.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994146.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994152.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994161.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1129.0 bits (2919), Expect = 0.0e+00
Identity = 600/615 (97.56%), Postives = 605/615 (98.37%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKKRAAILARRSLIALCN RSSCSSSVSNK LNQVRNLSIASEREEYQNDNGYHADNSX
Sbjct: 1   MCKKRAAILARRSLIALCNARSSCSSSVSNKALNQVRNLSIASEREEYQNDNGYHADNSX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNILLERRENLTAYNGFNNGELQQN 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQ+ESRQFVHGNSLNYHNSMPGLNNHIP+SRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQMESRQFVHGNSLNYHNSMPGLNNHIPVSRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVC YVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCKYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSM+DAY+IFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMNDAYLIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSIIDMLGSVGYVDEALEFIE MP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIIDMLGSVGYVDEALEFIENMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]
BLAST of Carg24970 vs. NCBI nr
Match: XP_023530381.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530394.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530402.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530411.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530418.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530427.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 599/615 (97.40%), Postives = 600/615 (97.56%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNILLERRENLTAYNGFNNGELQQN 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVL NTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLKNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTP        ILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPXXXXXXXXILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWE MMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]
BLAST of Carg24970 vs. NCBI nr
Match: XP_022929973.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929974.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929976.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929977.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 599/615 (97.40%), Postives = 600/615 (97.56%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNILLERRENLTAYNGFNNGELQQN 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNY NSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYRNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTP        ILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPXXXXXXXXILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWE MMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKA DLAKERE
Sbjct: 421 FEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKALDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]
BLAST of Carg24970 vs. NCBI nr
Match: XP_022139059.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia] >XP_022139061.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia] >XP_022139062.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia])

HSP 1 Score: 884.8 bits (2285), Expect = 1.7e-253
Identity = 500/733 (68.21%), Postives = 544/733 (74.22%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           M KKRAAILARRS+IALCN RSSCSS VSNK LN +RNLSI+SEREEYQNDNGYHAD  X
Sbjct: 1   MSKKRAAILARRSVIALCNARSSCSSYVSNKPLNLLRNLSISSEREEYQNDNGYHADXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWP-------------------------- 120
           XXXXXXXXXXXXXXXXXXXXXXX        S P                          
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXQSASLKSSSRPYQENLDGFYTEDLTRGQHRPSTSSVY 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GQAPGSGFTNTSPMHENASRSCLPTTSYGFNQNHYEAFRETYENTHNANLVAHNGNFIHH 180

Query: 181 --------------------------------NQNILLERRENLTAYNGFNNGELQQNNY 240
                                           +QN+LLE RENLTAY+GFNNG  ++N  
Sbjct: 181 GLNKGMMAQDLKSYNADSQISYNEVRGDDRSLSQNVLLEHRENLTAYSGFNNGVPRENGN 240

Query: 241 EVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQGG 300
            V GQ+SWGT +ESRQ+ H   LNYHN   G NN IPIS   EQNS+SQ + Q Q QQG 
Sbjct: 241 GVYGQSSWGTSMESRQYKHVTGLNYHNPTSGPNNQIPISGHCEQNSISQQYLQQQCQQGA 300

Query: 301 SVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEAVQ 360
           +VE YQP+P+TIQS  + TQ++NN N+D+E GVTKD+  G T+EELDEFC+EGKLKEAVQ
Sbjct: 301 TVEQYQPSPNTIQSSMMDTQLVNNINADKETGVTKDHQNGDTIEELDEFCKEGKLKEAVQ 360

Query: 361 ILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYS 420
           +LE  EKQ+I VDL RYL LMNAC EARSLEEAKVVC+Y+ +S +PLKVSTYNKILEMYS
Sbjct: 361 VLEALEKQHILVDLPRYLQLMNACAEARSLEEAKVVCDYISRSHSPLKVSTYNKILEMYS 420

Query: 421 KCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIG 480
           KCGSM DAY IFN MP+RNLTSWDTMITWLAKNGLGEDAIDLFYE KK GL+ DGKMFIG
Sbjct: 421 KCGSMGDAYTIFNNMPNRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKAGLKPDGKMFIG 480

Query: 481 VFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFE 540
           +FSACSVLGD+DEGMLH ESMTKNYGIIPSM HYVSI+DMLGSVGYVDEALEFIEKMP E
Sbjct: 481 LFSACSVLGDIDEGMLHLESMTKNYGIIPSMHHYVSIVDMLGSVGYVDEALEFIEKMPLE 540

Query: 541 PGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKK 600
           PGV+IWE MMNISRAHG MELGDRCFELVEQLDPSRLNE+SKAG LP++ASDLAKEREKK
Sbjct: 541 PGVEIWEMMMNISRAHGFMELGDRCFELVEQLDPSRLNEESKAGLLPVRASDLAKEREKK 600

Query: 601 KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQE 616
           KLAN+NLLEVRSRVHEYRAGDTSHPEND+IYTLLRGLREQMKEAGYIPETRFVLHDIDQE
Sbjct: 601 KLANQNLLEVRSRVHEYRAGDTSHPENDKIYTLLRGLREQMKEAGYIPETRFVLHDIDQE 660

[Close]
BLAST of Carg24970 vs. NCBI nr
Match: XP_011660234.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucumis sativus] >KGN66689.1 hypothetical protein Csa_1G659600 [Cucumis sativus])

HSP 1 Score: 878.2 bits (2268), Expect = 1.6e-251
Identity = 491/745 (65.91%), Postives = 514/745 (68.99%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKKRAAILARRSLIAL   RSSCSSSVSNK LN VRNLSIASEREE QNDNGYHADNS 
Sbjct: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNS- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNIL--------------------- 120
                                          S P+Q+IL                     
Sbjct: 61  LPSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVY 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPN 180

Query: 181 -----------------------------------------------LERRENLTAYN-- 240
                                                          L  RE  +AYN  
Sbjct: 181 GNFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGY 240

Query: 241 GFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMS 300
           G+NN   QQNNY VSGQN                  + N M G NNHIP+SRQYEQNS+ 
Sbjct: 241 GYNNEATQQNNYGVSGQNL-----------------HDNPMSGPNNHIPLSRQYEQNSIP 300

Query: 301 QPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDE 360
             HPQGQY QG SVE YQPN DT Q+  IGTQ+LNN N++EEIG  KD   GG LE+LDE
Sbjct: 301 LQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDE 360

Query: 361 FCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLK 420
           FC+EGKLKEAVQILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAKVVCNYVIKSQT +K
Sbjct: 361 FCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVK 420

Query: 421 VSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKK 480
           VSTYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK
Sbjct: 421 VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKK 480

Query: 481 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 540
            GLR DGKMFIGVFSACSVLGD DEGMLHFESMTKNYGI PSM HYVSI+DMLGS+G+VD
Sbjct: 481 AGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVD 540

Query: 541 EALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 600
           EA+EFIEKMP EPGVDIWETMMNISRAHGLMELGDRCFELVE LD SRLNEQSKAG LP+
Sbjct: 541 EAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPV 600

Query: 601 KASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 616
           KASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP
Sbjct: 601 KASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 660

[Close]
BLAST of Carg24970 vs. TAIR10
Match: AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 436.8 bits (1122), Expect = 2.3e-122
Identity = 211/391 (53.96%), Postives = 282/391 (72.12%), Query Frame = 0 

Query: 225 LEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIK 284
           +EE D FC+ GK+K+A+  +++    N  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 285 SQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDL 344
           S + L +S+ + +LEMYS CG  ++A  +F KM  +NL +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 345 FYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLG 404
           F   K+ G   DG++F G+F AC +LGDVDEG+LHFESM+++YGI PS++ YVS+++M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 405 SVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSK 464
             G++DEALEF+E+MP EP VD+WET+MN+SR HG +ELGD C E+VE LDP+RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 465 AGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 524
            G +P+KASD+ KE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 525 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 584
           E GY+ ETR  LHDIDQE K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 585 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           ALKI+S IVGRE+I RD KRFH  K+G C+C
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTC 611

[Close]
BLAST of Carg24970 vs. TAIR10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 433.3 bits (1113), Expect = 2.5e-121
Identity = 230/477 (48.22%), Postives = 310/477 (64.99%), Query Frame = 0 

Query: 164 YEQ--NSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEI-------- 223
           YEQ  N +S  +P  ++ Q G    Y  N    QS+   ++++N  N + +         
Sbjct: 72  YEQSLNPVSGQNPTNRFYQNG----YNRN----QSYGEHSEIINQRNQNWQSSDGCSSYG 131

Query: 224 ----GVTKDNPYGG-----------TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSR 283
               GV ++N  GG           +L+ELD  CREGK+K+AV+I++ +  +   VDL R
Sbjct: 132 TTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPR 191

Query: 284 YLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMP 343
              +   CG+A++L+EAKVV  ++  S     +S YN I+EMYS CGS++DA  +FN MP
Sbjct: 192 LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 251

Query: 344 SRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGML 403
            RNL +W  +I   AKNG GEDAID F   K+ G + DG+MF  +F AC VLGD++EG+L
Sbjct: 252 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 311

Query: 404 HFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAH 463
           HFESM K YGIIP M+HYVS++ ML   GY+DEAL F+E M  EP VD+WET+MN+SR H
Sbjct: 312 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVH 371

Query: 464 GLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHE 523
           G + LGDRC ++VEQLD SRLN++SKAG +P+K+SDL KE+ ++     N       +  
Sbjct: 372 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRY 431

Query: 524 YRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVA 583
             AGD S PEN  +Y  L+ L+E M E GY+P ++  LHD+DQE K++ L  H+ER A  
Sbjct: 432 MAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFI 491

Query: 584 YGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
              + + ARS IRV+KNLRVC DCH+ALK++SKIVGRELI RDAKRFHH KDG+CSC
Sbjct: 492 STFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533

[Close]
BLAST of Carg24970 vs. TAIR10
Match: AT2G34370.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 352.4 bits (903), Expect = 5.6e-97
Identity = 175/399 (43.86%), Postives = 266/399 (66.67%), Query Frame = 0 

Query: 218 DNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKV 277
           +N    T+E  D  C++ K++EA++++++ E +   VD  R L L   CGE  +LEEA+V
Sbjct: 74  NNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARV 133

Query: 278 VCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGL 337
           V + +    TPL   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG 
Sbjct: 134 VHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGE 193

Query: 338 GEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYV 397
           GE AID+F    + G + D ++F  VF AC  +GD++EG+LHFESM ++YG++ SM+ YV
Sbjct: 194 GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV 253

Query: 398 SIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPS 457
           ++I+ML + G++DEAL+F+E+M  EP V++WET+MN+    G +ELGDR  EL+++LD S
Sbjct: 254 NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 313

Query: 458 RLNEQSKAGHLPIKASDLAKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLL 517
           R++++S AG +  KASD A E+ K+ +       + + R+HE+RAGDTSH       +  
Sbjct: 314 RMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAF 373

Query: 518 RGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNL 577
           R L+ QM + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+
Sbjct: 374 RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNM 433

Query: 578 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           R C D H+  K+IS I GR LI RD K++H +K+G+CSC
Sbjct: 434 RTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSC 465

[Close]
BLAST of Carg24970 vs. TAIR10
Match: AT1G29710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 345.5 bits (885), Expect = 6.8e-95
Identity = 174/396 (43.94%), Postives = 248/396 (62.63%), Query Frame = 0 

Query: 224 TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVI 283
           T+E  D  C +G  +EAV++L+  E +   +DL R L L   CG+  +LE A+VV   +I
Sbjct: 87  TIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII 146

Query: 284 KSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAID 343
              +P  V   N I+EMYS C S+DDA  +F +MP  N  +   M+     NG GE+AID
Sbjct: 147 ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAID 206

Query: 344 LFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDML 403
           LF   K+ G + +G++F  VFS C++ GDV EG L F++M + YGI+PSM+HY S+  ML
Sbjct: 207 LFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKML 266

Query: 404 GSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQS 463
            + G++DEAL F+E+MP EP VD+WET+MN+SR HG +ELGDRC ELVE+LD +RL++ S
Sbjct: 267 ATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS 326

Query: 464 KAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEY---RAGDTSHPENDRIYTLLRGLR 523
            AG +  KASD  K+              RS  + Y   R  D+SHP+ + IY  L  LR
Sbjct: 327 SAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 386

Query: 524 EQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 583
            Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  RS I ++ N+R+ G
Sbjct: 387 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVG 446

Query: 584 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCH 617
           DCH  +K++S I GR++I RDAK +H FK+G+C C+
Sbjct: 447 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCN 472

[Close]
BLAST of Carg24970 vs. TAIR10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 292.4 bits (747), Expect = 6.9e-79
Identity = 159/392 (40.56%), Postives = 239/392 (60.97%), Query Frame = 0 

Query: 237 LKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNK 296
           L +A+ ++    +    +D   Y  +++A     +LE    V    +++     V   + 
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 297 ILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTG-LRI 356
           +++MYSKCG +D A   FN MP RN  SW++MI+  A++G GE+A+ LF  +K  G    
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719

Query: 357 DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEF 416
           D   F+GV SACS  G ++EG  HFESM+ +YG+ P ++H+  + D+LG  G +D+  +F
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779

Query: 417 IEKMPFEPGVDIWETMMN-ISRAHG-LMELGDRCFELVEQLDPSRLNEQSKAGHL----- 476
           IEKMP +P V IW T++    RA+G   ELG +  E++ QL+P         G++     
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839

Query: 477 ----PIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 536
                +KA    K+ + KK A  + + ++  VH + AGD SHP+ D IY  L+ L  +M+
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899

Query: 537 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISS-SARSPIRVIKNLRVCGDCH 596
           +AGY+P+T F L+D++QE K + L  HSE+LAVA+ L +  S+  PIR++KNLRVCGDCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959

Query: 597 SALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           SA K ISKI GR++I+RD+ RFHHF+DG CSC
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991

[Close]
BLAST of Carg24970 vs. Swiss-Prot
Match: sp|Q680H3|PP170_ARATH (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 4.1e-121
Identity = 211/391 (53.96%), Postives = 282/391 (72.12%), Query Frame = 0 

Query: 225 LEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIK 284
           +EE D FC+ GK+K+A+  +++    N  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 285 SQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDL 344
           S + L +S+ + +LEMYS CG  ++A  +F KM  +NL +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 345 FYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLG 404
           F   K+ G   DG++F G+F AC +LGDVDEG+LHFESM+++YGI PS++ YVS+++M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 405 SVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSK 464
             G++DEALEF+E+MP EP VD+WET+MN+SR HG +ELGD C E+VE LDP+RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 465 AGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 524
            G +P+KASD+ KE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 525 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 584
           E GY+ ETR  LHDIDQE K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 585 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           ALKI+S IVGRE+I RD KRFH  K+G C+C
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTC 611

[Close]
BLAST of Carg24970 vs. Swiss-Prot
Match: sp|Q9SUU7|PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.5e-120
Identity = 230/477 (48.22%), Postives = 310/477 (64.99%), Query Frame = 0 

Query: 164 YEQ--NSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEI-------- 223
           YEQ  N +S  +P  ++ Q G    Y  N    QS+   ++++N  N + +         
Sbjct: 72  YEQSLNPVSGQNPTNRFYQNG----YNRN----QSYGEHSEIINQRNQNWQSSDGCSSYG 131

Query: 224 ----GVTKDNPYGG-----------TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSR 283
               GV ++N  GG           +L+ELD  CREGK+K+AV+I++ +  +   VDL R
Sbjct: 132 TTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPR 191

Query: 284 YLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMP 343
              +   CG+A++L+EAKVV  ++  S     +S YN I+EMYS CGS++DA  +FN MP
Sbjct: 192 LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 251

Query: 344 SRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGML 403
            RNL +W  +I   AKNG GEDAID F   K+ G + DG+MF  +F AC VLGD++EG+L
Sbjct: 252 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 311

Query: 404 HFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAH 463
           HFESM K YGIIP M+HYVS++ ML   GY+DEAL F+E M  EP VD+WET+MN+SR H
Sbjct: 312 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVH 371

Query: 464 GLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHE 523
           G + LGDRC ++VEQLD SRLN++SKAG +P+K+SDL KE+ ++     N       +  
Sbjct: 372 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRY 431

Query: 524 YRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVA 583
             AGD S PEN  +Y  L+ L+E M E GY+P ++  LHD+DQE K++ L  H+ER A  
Sbjct: 432 MAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFI 491

Query: 584 YGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
              + + ARS IRV+KNLRVC DCH+ALK++SKIVGRELI RDAKRFHH KDG+CSC
Sbjct: 492 STFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533

[Close]
BLAST of Carg24970 vs. Swiss-Prot
Match: sp|Q8S8Q7|PP183_ARATH (Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H25 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.0e-95
Identity = 175/399 (43.86%), Postives = 266/399 (66.67%), Query Frame = 0 

Query: 218 DNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKV 277
           +N    T+E  D  C++ K++EA++++++ E +   VD  R L L   CGE  +LEEA+V
Sbjct: 74  NNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARV 133

Query: 278 VCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGL 337
           V + +    TPL   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG 
Sbjct: 134 VHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGE 193

Query: 338 GEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYV 397
           GE AID+F    + G + D ++F  VF AC  +GD++EG+LHFESM ++YG++ SM+ YV
Sbjct: 194 GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV 253

Query: 398 SIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPS 457
           ++I+ML + G++DEAL+F+E+M  EP V++WET+MN+    G +ELGDR  EL+++LD S
Sbjct: 254 NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 313

Query: 458 RLNEQSKAGHLPIKASDLAKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLL 517
           R++++S AG +  KASD A E+ K+ +       + + R+HE+RAGDTSH       +  
Sbjct: 314 RMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAF 373

Query: 518 RGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNL 577
           R L+ QM + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+
Sbjct: 374 RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNM 433

Query: 578 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           R C D H+  K+IS I GR LI RD K++H +K+G+CSC
Sbjct: 434 RTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSC 465

[Close]
BLAST of Carg24970 vs. Swiss-Prot
Match: sp|Q9C6G2|PPR63_ARATH (Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H67 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.2e-93
Identity = 174/396 (43.94%), Postives = 248/396 (62.63%), Query Frame = 0 

Query: 224 TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVI 283
           T+E  D  C +G  +EAV++L+  E +   +DL R L L   CG+  +LE A+VV   +I
Sbjct: 87  TIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII 146

Query: 284 KSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAID 343
              +P  V   N I+EMYS C S+DDA  +F +MP  N  +   M+     NG GE+AID
Sbjct: 147 ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAID 206

Query: 344 LFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDML 403
           LF   K+ G + +G++F  VFS C++ GDV EG L F++M + YGI+PSM+HY S+  ML
Sbjct: 207 LFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKML 266

Query: 404 GSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQS 463
            + G++DEAL F+E+MP EP VD+WET+MN+SR HG +ELGDRC ELVE+LD +RL++ S
Sbjct: 267 ATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS 326

Query: 464 KAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEY---RAGDTSHPENDRIYTLLRGLR 523
            AG +  KASD  K+              RS  + Y   R  D+SHP+ + IY  L  LR
Sbjct: 327 SAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 386

Query: 524 EQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 583
            Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  RS I ++ N+R+ G
Sbjct: 387 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVG 446

Query: 584 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCH 617
           DCH  +K++S I GR++I RDAK +H FK+G+C C+
Sbjct: 447 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCN 472

[Close]
BLAST of Carg24970 vs. Swiss-Prot
Match: sp|Q9FIB2|PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-77
Identity = 159/392 (40.56%), Postives = 239/392 (60.97%), Query Frame = 0 

Query: 237 LKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNK 296
           L +A+ ++    +    +D   Y  +++A     +LE    V    +++     V   + 
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 297 ILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTG-LRI 356
           +++MYSKCG +D A   FN MP RN  SW++MI+  A++G GE+A+ LF  +K  G    
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719

Query: 357 DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEF 416
           D   F+GV SACS  G ++EG  HFESM+ +YG+ P ++H+  + D+LG  G +D+  +F
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779

Query: 417 IEKMPFEPGVDIWETMMN-ISRAHG-LMELGDRCFELVEQLDPSRLNEQSKAGHL----- 476
           IEKMP +P V IW T++    RA+G   ELG +  E++ QL+P         G++     
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839

Query: 477 ----PIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 536
                +KA    K+ + KK A  + + ++  VH + AGD SHP+ D IY  L+ L  +M+
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899

Query: 537 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISS-SARSPIRVIKNLRVCGDCH 596
           +AGY+P+T F L+D++QE K + L  HSE+LAVA+ L +  S+  PIR++KNLRVCGDCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959

Query: 597 SALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           SA K ISKI GR++I+RD+ RFHHF+DG CSC
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991

[Close]
BLAST of Carg24970 vs. TrEMBL
Match: tr|A0A0A0M061|A0A0A0M061_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659600 PE=4 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 1.1e-251
Identity = 491/745 (65.91%), Postives = 514/745 (68.99%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKKRAAILARRSLIAL   RSSCSSSVSNK LN VRNLSIASEREE QNDNGYHADNS 
Sbjct: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNS- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNIL--------------------- 120
                                          S P+Q+IL                     
Sbjct: 61  LPSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVY 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 GQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPN 180

Query: 181 -----------------------------------------------LERRENLTAYN-- 240
                                                          L  RE  +AYN  
Sbjct: 181 GNFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGY 240

Query: 241 GFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMS 300
           G+NN   QQNNY VSGQN                  + N M G NNHIP+SRQYEQNS+ 
Sbjct: 241 GYNNEATQQNNYGVSGQNL-----------------HDNPMSGPNNHIPLSRQYEQNSIP 300

Query: 301 QPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDE 360
             HPQGQY QG SVE YQPN DT Q+  IGTQ+LNN N++EEIG  KD   GG LE+LDE
Sbjct: 301 LQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDE 360

Query: 361 FCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLK 420
           FC+EGKLKEAVQILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAKVVCNYVIKSQT +K
Sbjct: 361 FCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVK 420

Query: 421 VSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKK 480
           VSTYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK
Sbjct: 421 VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKK 480

Query: 481 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 540
            GLR DGKMFIGVFSACSVLGD DEGMLHFESMTKNYGI PSM HYVSI+DMLGS+G+VD
Sbjct: 481 AGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVD 540

Query: 541 EALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 600
           EA+EFIEKMP EPGVDIWETMMNISRAHGLMELGDRCFELVE LD SRLNEQSKAG LP+
Sbjct: 541 EAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPV 600

Query: 601 KASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 616
           KASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP
Sbjct: 601 KASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 660

[Close]
BLAST of Carg24970 vs. TrEMBL
Match: tr|A0A1S3B9H3|A0A1S3B9H3_CUCME (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103487241 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 4.2e-240
Identity = 470/745 (63.09%), Postives = 499/745 (66.98%), Query Frame = 0 

Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60
           MCKK+AAILARRSLIAL   RSSCSSSVS+K LN VRNLSIASEREE Q+DNGYHADNS 
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNS- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNQNIL--------------------- 120
                                          S P+Q+IL                     
Sbjct: 61  LRSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAY 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RQKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPN 180

Query: 181 -----------------------------------------------LERRENLTAYN-- 240
                                                          L  RE  +AYN  
Sbjct: 181 GNFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGY 240

Query: 241 GFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMS 300
           G++N   QQN Y +SGQNSWGT  ES+Q++HG  L +HN M G                 
Sbjct: 241 GYSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGXXXXXXXXXXXXXXXXX 300

Query: 301 QPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDE 360
                             PNPDT Q++ IG QVL N N++EEIG T+D   GG LE+LDE
Sbjct: 301 XXXXXXXXXXXXXXXXXXPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDE 360

Query: 361 FCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLK 420
           FC+EG LKEAV+ILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAK VCNYVIKSQT +K
Sbjct: 361 FCKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVK 420

Query: 421 VSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKK 480
           VSTYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK
Sbjct: 421 VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKK 480

Query: 481 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 540
            GLR DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSI+DMLGS G+VD
Sbjct: 481 AGLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVD 540

Query: 541 EALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 600
           EALEFIEKMP EPGVDIWETMMNI+RAHGLMELGDRCFELVE LDPSRLNEQSKAG LPI
Sbjct: 541 EALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCFELVEHLDPSRLNEQSKAGLLPI 600

Query: 601 KASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 616
           KASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP
Sbjct: 601 KASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 660

[Close]
BLAST of Carg24970 vs. TrEMBL
Match: tr|A0A251RK37|A0A251RK37_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 7.8e-186
Identity = 318/430 (73.95%), Postives = 367/430 (85.35%), Query Frame = 0 

Query: 187 YQPNPDTIQSHTIGTQVLNNTNSDEE-IGVTKDNPYGGTLEELDEFCREGKLKEAVQILE 246
           YQ NPD  Q+  + +QV + + S+ + I  ++ +PY GTLEELD+FC+EGK+KEAV+IL 
Sbjct: 278 YQTNPDPFQNTIVDSQVASESKSERKLIEASESSPYSGTLEELDKFCKEGKVKEAVEILG 337

Query: 247 MFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCG 306
           M EKQ + VDL  Y  LM ACGEA++LEEAK V   + +  +PL VSTYN+ILEMYSKCG
Sbjct: 338 MLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVHENITRLLSPLNVSTYNRILEMYSKCG 397

Query: 307 SMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFS 366
           SMD  +M+FN+MP+RNLTSWD MI WLAKNGLGEDAIDLF E KK GL+ DG+MFIGVF 
Sbjct: 398 SMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGLGEDAIDLFTEFKKAGLKPDGQMFIGVFY 457

Query: 367 ACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGV 426
           ACSVLGD  EG+LHFESM+K+YGI+PSM HYVS++DMLGS GY++EALEFIEKMP EP V
Sbjct: 458 ACSVLGDTTEGLLHFESMSKDYGIVPSMDHYVSVVDMLGSTGYLEEALEFIEKMPLEPNV 517

Query: 427 DIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLA 486
           D+W+T+MN+ R HG +ELGDRC ELVEQLD S LNEQSKAG +P+K SDL KE+EKKKLA
Sbjct: 518 DVWKTLMNLCRVHGQLELGDRCAELVEQLDASSLNEQSKAGLVPVKDSDLVKEKEKKKLA 577

Query: 487 NRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKN 546
            +NLLEVRSRVHEYRAGDTSHPEND+IY  LRGLREQMKEAGYIPETRFVLHDIDQEGK 
Sbjct: 578 AQNLLEVRSRVHEYRAGDTSHPENDKIYAQLRGLREQMKEAGYIPETRFVLHDIDQEGKE 637

Query: 547 DALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 606
           DALL HSERLAVAY L+SS ARSP+RVIKNLRVCGDCH+ALKIISKIVGRELI+RDAKRF
Sbjct: 638 DALLAHSERLAVAYALLSSPARSPVRVIKNLRVCGDCHNALKIISKIVGRELIMRDAKRF 697

Query: 607 HHFKDGLCSC 616
           HHFKDGLCSC
Sbjct: 698 HHFKDGLCSC 707

[Close]
BLAST of Carg24970 vs. TrEMBL
Match: tr|A0A251RJK0|A0A251RJK0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 7.8e-186
Identity = 318/430 (73.95%), Postives = 367/430 (85.35%), Query Frame = 0 

Query: 187 YQPNPDTIQSHTIGTQVLNNTNSDEE-IGVTKDNPYGGTLEELDEFCREGKLKEAVQILE 246
           YQ NPD  Q+  + +QV + + S+ + I  ++ +PY GTLEELD+FC+EGK+KEAV+IL 
Sbjct: 284 YQTNPDPFQNTIVDSQVASESKSERKLIEASESSPYSGTLEELDKFCKEGKVKEAVEILG 343

Query: 247 MFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCG 306
           M EKQ + VDL  Y  LM ACGEA++LEEAK V   + +  +PL VSTYN+ILEMYSKCG
Sbjct: 344 MLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVHENITRLLSPLNVSTYNRILEMYSKCG 403

Query: 307 SMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFS 366
           SMD  +M+FN+MP+RNLTSWD MI WLAKNGLGEDAIDLF E KK GL+ DG+MFIGVF 
Sbjct: 404 SMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGLGEDAIDLFTEFKKAGLKPDGQMFIGVFY 463

Query: 367 ACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGV 426
           ACSVLGD  EG+LHFESM+K+YGI+PSM HYVS++DMLGS GY++EALEFIEKMP EP V
Sbjct: 464 ACSVLGDTTEGLLHFESMSKDYGIVPSMDHYVSVVDMLGSTGYLEEALEFIEKMPLEPNV 523

Query: 427 DIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLA 486
           D+W+T+MN+ R HG +ELGDRC ELVEQLD S LNEQSKAG +P+K SDL KE+EKKKLA
Sbjct: 524 DVWKTLMNLCRVHGQLELGDRCAELVEQLDASSLNEQSKAGLVPVKDSDLVKEKEKKKLA 583

Query: 487 NRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKN 546
            +NLLEVRSRVHEYRAGDTSHPEND+IY  LRGLREQMKEAGYIPETRFVLHDIDQEGK 
Sbjct: 584 AQNLLEVRSRVHEYRAGDTSHPENDKIYAQLRGLREQMKEAGYIPETRFVLHDIDQEGKE 643

Query: 547 DALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 606
           DALL HSERLAVAY L+SS ARSP+RVIKNLRVCGDCH+ALKIISKIVGRELI+RDAKRF
Sbjct: 644 DALLAHSERLAVAYALLSSPARSPVRVIKNLRVCGDCHNALKIISKIVGRELIMRDAKRF 703

Query: 607 HHFKDGLCSC 616
           HHFKDGLCSC
Sbjct: 704 HHFKDGLCSC 713

[Close]
BLAST of Carg24970 vs. TrEMBL
Match: tr|M5XL53|M5XL53_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa003215mg PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 7.8e-186
Identity = 318/430 (73.95%), Postives = 367/430 (85.35%), Query Frame = 0 

Query: 187 YQPNPDTIQSHTIGTQVLNNTNSDEE-IGVTKDNPYGGTLEELDEFCREGKLKEAVQILE 246
           YQ NPD  Q+  + +QV + + S+ + I  ++ +PY GTLEELD+FC+EGK+KEAV+IL 
Sbjct: 159 YQTNPDPFQNTIVDSQVASESKSERKLIEASESSPYSGTLEELDKFCKEGKVKEAVEILG 218

Query: 247 MFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCG 306
           M EKQ + VDL  Y  LM ACGEA++LEEAK V   + +  +PL VSTYN+ILEMYSKCG
Sbjct: 219 MLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVHENITRLLSPLNVSTYNRILEMYSKCG 278

Query: 307 SMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFS 366
           SMD  +M+FN+MP+RNLTSWD MI WLAKNGLGEDAIDLF E KK GL+ DG+MFIGVF 
Sbjct: 279 SMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGLGEDAIDLFTEFKKAGLKPDGQMFIGVFY 338

Query: 367 ACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGV 426
           ACSVLGD  EG+LHFESM+K+YGI+PSM HYVS++DMLGS GY++EALEFIEKMP EP V
Sbjct: 339 ACSVLGDTTEGLLHFESMSKDYGIVPSMDHYVSVVDMLGSTGYLEEALEFIEKMPLEPNV 398

Query: 427 DIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLA 486
           D+W+T+MN+ R HG +ELGDRC ELVEQLD S LNEQSKAG +P+K SDL KE+EKKKLA
Sbjct: 399 DVWKTLMNLCRVHGQLELGDRCAELVEQLDASSLNEQSKAGLVPVKDSDLVKEKEKKKLA 458

Query: 487 NRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKN 546
            +NLLEVRSRVHEYRAGDTSHPEND+IY  LRGLREQMKEAGYIPETRFVLHDIDQEGK 
Sbjct: 459 AQNLLEVRSRVHEYRAGDTSHPENDKIYAQLRGLREQMKEAGYIPETRFVLHDIDQEGKE 518

Query: 547 DALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 606
           DALL HSERLAVAY L+SS ARSP+RVIKNLRVCGDCH+ALKIISKIVGRELI+RDAKRF
Sbjct: 519 DALLAHSERLAVAYALLSSPARSPVRVIKNLRVCGDCHNALKIISKIVGRELIMRDAKRF 578

Query: 607 HHFKDGLCSC 616
           HHFKDGLCSC
Sbjct: 579 HHFKDGLCSC 588

The following BLAST results are available for this feature:
BLAST of Carg24970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994138.10.0e+0097.56pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ... [more]
XP_023530381.10.0e+0097.40pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ... [more]
XP_022929973.10.0e+0097.40pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucur... [more]
XP_022139059.11.7e-25368.21pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momor... [more]
XP_011660234.11.6e-25165.91PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial ... [more]
BLAST of Carg24970 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G25580.12.3e-12253.96Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G32450.12.5e-12148.22Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G34370.15.6e-9743.86Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G29710.16.8e-9543.94Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G09950.16.9e-7940.56Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg24970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q680H3|PP170_ARATH4.1e-12153.96Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX... [more]
sp|Q9SUU7|PP346_ARATH4.5e-12048.22Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop... [more]
sp|Q8S8Q7|PP183_ARATH1.0e-9543.86Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidop... [more]
sp|Q9C6G2|PPR63_ARATH1.2e-9343.94Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidop... [more]
sp|Q9FIB2|PP373_ARATH1.2e-7740.56Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
BLAST of Carg24970 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M061|A0A0A0M061_CUCSA1.1e-25165.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659600 PE=4 SV=1[more]
tr|A0A1S3B9H3|A0A1S3B9H3_CUCME4.2e-24063.09pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cuc... [more]
tr|A0A251RK37|A0A251RK37_PRUPE7.8e-18673.95Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1[more]
tr|A0A251RJK0|A0A251RJK0_PRUPE7.8e-18673.95Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1[more]
tr|M5XL53|M5XL53_PRUPE7.8e-18673.95Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa003215mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24970-RACarg24970-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 475..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..86
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 26..543
NoneNo IPR availablePANTHERPTHR24015:SF583SUBFAMILY NOT NAMEDcoord: 26..543
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 365..499
e-value: 5.2E-14
score: 54.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 258..364
e-value: 1.4E-19
score: 72.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 293..322
e-value: 4.2E-5
score: 21.4
coord: 324..356
e-value: 6.7E-5
score: 20.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 396..419
e-value: 0.027
score: 14.6
coord: 231..251
e-value: 1.1
score: 9.5
coord: 292..321
e-value: 1.3E-4
score: 21.9
coord: 324..352
e-value: 8.1E-5
score: 22.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..422
score: 7.07
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..324
score: 10.49
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..254
score: 5.47
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 325..355
score: 6.785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 356..391
score: 6.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 6.281
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 490..609
e-value: 6.2E-40
score: 135.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24970CmaCh04G019320Cucurbita maxima (Rimu)carcmaB1020
Carg24970CmoCh04G020490Cucurbita moschata (Rifu)carcmoB0992
Carg24970Cp4.1LG01g16790Cucurbita pepo (Zucchini)carcpeB1026
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg24970Wax gourdcarwgoB0861
Carg24970Bottle gourd (USVL1VR-Ls)carlsiB667
Carg24970Watermelon (Charleston Gray)carwcgB0706
Carg24970Watermelon (97103) v1carwmB0727
Carg24970Watermelon (97103) v2carwmbB0762