Carg24860 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24860
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Formyltetrahydrofolate deformylase
Location	Cucurbita_argyrosperma_scaffold_245 : 105549 .. 111254 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTTCTATCTGTTGTGTTTGTCTTCACCTCCAGATTTTCATTCCCTTTTTGATTTTTTTTTCTCACCGTCGATTCGCCGGAGCTCTGATCCGGTTCCGGAACCTGTCTTCTTCTCTCCTTCTCCTTCTCCCCTTTCTCCATTAGTGCAATTGGAATCCTCTCTCGTTCTCTTCCGTTTGCGGCATTGGCGTTGATTTGATTGAGGCTAAGGCCGGTTCTGTTCCAAGCAGAGCAACAATTGGCATCAAAGGAGCTTTGTTAATCCGTCAGGGAATGGAGGGAGGTAGCATTAGAGGATTCGATTTTTCTGGTATTGTTCTTTTTTTCCTTTTTTTCGGTAGTGGATTTGATTGGGTTTCGTTTGTTGTTCTTGCAGTGGATTCGTTTGTGCGTTGTGAGTTCTGAGCCTTGAGGAGCTCGGAAGGTTCTGAACTTGGGAGGGAGGAAGAGAGATGGTCCTCATTCGGAGAGTTTCGTCGACTTTCCCTCGAGTTTTTGCGTTTGCGAATAGGTCCTTGTGTTCTTTGAATTCTCCGGGCGAGTCCTTGGATTTACCGACCTCTTCCTCTTTCACTCATGGAATCCATGTCTTCCATTGTCCTGTAAGTAATCCTTCGATTGCTGACTAAGTTAGACTGCTTCGACTCTGTGTTCTATTCTAATATACATGTCTCTATTATCGGATATAAAGACGAAGGATAGATTGCTTGTGCGATTTATACTGGTTTTGTGATAGGATGCCATGGGAATCGTTGCTAAGCTATCGGAATGTATAGCTTCCAGAGGGGGAAACATACTCGGCGCCGATATTTTTGTCCCTGAAAACAAGAACGTCTTCTATTCCAGAAGGTAATCTATGGCTTCTTTTGCTTATGGTGGTCTCTGAATAAATCATTTCATATTGTTGTACTATGTAACTGCCCTTTTCTTATTCTGTGCTTTAAAAGGGTTTTATAGATCATATGAATATGAACATAAGGAAGGAGGCCAAGCTCCAGCTAATAAATAAATCACTCAATTGACACACAGAGTTTTGATAACGTAATTGTTGAAAGGAGAGACAAGTTTACACTAAAAAATAGTCAGTAGATTCAAAAGAGACGCCATCTAGAAATTGTTCCAAGGGTTATCTTTGTTGTTAAAGATCCTGTTAAATGATGTCTCTATCTTATTATGGGCTTTTGTTGAATTAAACAAAAAGAAAATATGATCCATCCAGAACCTATCAAGGGGGTTTGTATTTTTGCTATAGATTAAAGAAAGAGGTCTGTTATAGTCTTGACATCTGCAAAGTCAAATCTCAAGTCAAGGTGTTAGCGCTTTAGAAAGATTGCTGGGCATTGAGGCTTGACTAAGAATCTCGAAAGGGCTTTTGAAGCTTACTCTGCTACAGCGAACCGTTAGGTTAGTAGGGTGCCCCGGTTTGGAGGCTTGAAGGACTTTGCACCATGATGAGGGTATGAAAGCCAATGGTTCGGCCATGCCATGGCTAGTGGGAAAAAAAACCATAGGCTAGTGTTGCGAAGAGGCTAGGAGCAGACTCATTTTTCGGCCACGGTATACTTAGCCCCTTAATTTTGTAATCTAATTTACGCAATTACATATAAGGCTAAATCGATCTACTCAACAATTGTCGCATTCAAAGTAAAAGATGTTCTTTTATTATGTTTGGTGTCTGCCTAGGAAACGTGGATACAAATGAAAGGATAATGATTATGACAGGTTTAATATATGAACTTTACGTTTGATTAACTCCTTGTTAAGCAACATGTTCCATGACCTTGTGGCGAGTCAAGAAAGACATCCATGCTCATATTTCATTTTCTACTATATTTTTTCTTGTATCTCTATAAGCCGTGTCCTCCTTTTATTGTATATCAGGATTACTCATAATTTTCAAGAGTGAAATTTGATCTTGTGTTCCTGACTGTTACTGAGGACTTGCATCAGTAACTGCAATATTATACTGACATAATTGCTGCTTTCTGGGATGTTATTGAAGACTTGCATTAGTAACTACAATTTGAGAGGAACATCATGATTTTACTTTGTTTTTTCCTTTCTGGGAACAGTGGAAGTTCTTGCATACTTGATACTCTTAAAAAGCGTTGTTATTGTTGTTTTCTGGGAACAGTGGAAGTTCTTGCATGTTTGAAAAGCATGCCTAAAAAGCTACCTAGCATTTCTCGCGAAGTTTAGAACATTATAACTGCTCTTCTTTGGTATCCATGGAAGTCTTAAGAGTGGTTGATGAGAGAACATTTCTAGTCTTGTGTTCAAGAATGTAATTCATGACTTGCATTTGTAACTTGAAATAAAAGAGTATTCCGCTTGTACACGTACTGCTCCCTAGTGGGATTATGTATGCTACGCTGTGAACCTGTTTTTGTCTGTAAAAACTAGTACATTTTTTAGTTTTATGGCCATTAACTTGGCTGTGATGAATATCCTATTGAACTTTATTATATCTTCAAGGAAGCAATTTGGATTTCTCTTGTGCACTATGCTGAAAGCGAAAACTCAGCTTGAACCACCACCCGTGTCTGACTTTCGTTTTATGTGCAGCCAGTTTCTTTTTGATCCTTGTAAATGGCCTAGGATGCAAATGGATGAAGACTTCCTTAAGATTTCCAAAACATTTAACGCTTGGAAATCTGTTGTCCGAGTACCAGATCAAGACCCCAAGTATAAGATTGCAATTCTTGCTTCAAAACAGGTATACATATACCGGTCAATTTCATGTCAATCTTTTTTGTTTGCATGGATATTTGAGATTAACTTACTTTTCCCATTGCAGGATCATTGTCTGGTTGACTTACTTCATCACTGGCAAGGAGGGAAACTTCCAGTGGAAATAACTTGTGTTATAAGGTCAATTTTCCGAAACTTGCTTCTTTAATTTGTTTCGAAGTACCGTGACCTTTCTTCTCAATCCACTTGTTTCAGTAATCACGATAGAGCCCCCAACACCCACGTGATGCGATTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCACACATACAATGATAATAAAAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTCGCCAGGTATATGCAGGTAAATTGGATCATAATACTTATGCATTCGTACCAGCTGAATCCTTTTGAAAAAAATTAGTTAATTATGAAGTTCCAAATCATGTTCTTCATGAAATCCGAGATCTACAAAGTCAATGGATGTTGTCTTGTTGAAAAGTAAAGTAAATCTTAATTCAATTTCTTAGTGTTAACTGATTCACTGAGCAATTCAATACCTAATCCTGGCCGTTATCAAATTTCTTCTGCAGGTATTGTCTGGTAGTTTCTTGAGGAGCTACAGAAATGATGTAATTAACATCCACCATGGTCTTCTGCCTTCATTCAAGGGTAGTAATCCTTCAAAACAGGCAAGTTACACAAGCCATCAATCCCCCCTCCCCAACTCCCATTTTGTTTATCTTTTCTGCAACTGTCTATGCATCTTTAATCTGTTGGATTTCATTGACAGGCGTTTAATGCTGGCGTGAAGTTAATTGGTGCTACAAGCCATTTTGTGACAGAAGAACTCGATGCTGGACCAATCATTGAACAGATGGTATCTTTTAGATAGATTGTTTGATGCAACTAATCTGCATGTTGTCTATTTCCTTGTTCTTTATCTCTGAACATAGCCTGCTCCTCTACTTCTTTTTTCTTTTTATAAATTCTTGGGTGTTTAATTCTTGTTCTTTATTTTTGAACCATGCCTCTCCTCTCCTCCTCTACCCTTCTTTTTTTCTTTTTATAAATTCTTGGATGTTTAATCAAGTCATTCTTAACCCTTGTTTTTCTAAAAAACTATTAAATACGCAGTCCATGGATTGTCCATGCGAACATGTTGGTTGCCATTTTCTTTTCATTAATATAACCACTAAGTTTTTGTTCAAAATTATCAGGTTGAGAGGGTTTCCCACAGAGATAATTTGCAGAGTTTTGTGCAGAAGTCCGAGACCTTAGAAAAGCAATGTCTAACGAATGCAATTAAATCATACTGTGAGCTGCGCGTTTTGCCATACGAGGAAAACAGGACTGTCGTTTTTTAAGAGGAAAAGGATGCATCCATTTGAAGTATGTCAAGTACATTTCTTCTTCTGCTCATTTGATTTTTCAATTAACATACTCTTTTTGGCATATTTTATACGTTGAATTCAATTTCAATTTATATATACCTTATACCTCGACCTTGATTTGTTTCAAATCAACTTGCAAGTTAAAAAAAAAATAAGTGGATTTATCTTTTTAACTCCGTTTAGACTAATTTGGAGCTTGATGGTGTGAAGAATATATTATATATTATCTTGTCTACTCTTTTGAATGTTCGCACAAAGAGTGTAGAGACCCAACTTTCTTTTTTTAAAAAAAAATTTAGAGACTAAAGTCGTTACTATACTGCATGTCAAAAGTTGTTGAAATCGAAGATGAACACAGCTCCCTTTGGGCTATGTGCAACTTAGATAGAGGTTTCTAGTGTTTTTGTAGGGTCGATGACTCATTTCTTCAACAATTTCACATGGCACTTGTTATGCAGACGATACATCAAGGGCAGTAAAGCCCATCTATAAGCATCTACATCAATGTACTCCAAAAATTAAAAAATTCAAACTTGTTTAGGACTAGCTTTTCCCTTCTTTACTAGAATGCCTAAACTCTTTTTTCATTGCTCGGAGAAAAACTTATGTGCTTGGAACCTGTCTTTTAGACGTGATTTAAACGTCTATCAAACTATCAATATGGAGACGATATATGATATCGAAATCTTATTGAATGTGAAGTGTCCTCTGTAAACATTGTCAAACCATCAATGTAAACCATCACAAGTTTTTTTTGCCATTATCAATGCTGATATAACATGAACTCTAACTATCTTCTTTAGTTATAATTCTCTTTCTCTACATAATATTCTCTTAATTTGGTCTCTGTTTTTTTCAATATCGATGTCTGTTCTAACATAAGTTTTTATTCATTTGCTCCATCCTAATATCATAAGTTTTCATGTTTAGTGAACTAGACTATAATTAAGATTTGAGCCTAATATTCCATTAATATTGTGAACTCTTTGGAAGACTGTATGGTGAGCATTCTTATTTGTGGGAATGCCATTGATTTGTAAGAGGGACTCGCTCATCTAGACACGGTTTACAAATTAATCTCTTACTAAAGTAATTACTTGTGCTAAATTCTTTAAGCATTTCTTAACCATCCTATACTAAAGTAATTATTTGTGTTAAATTTTGATGATTATTGTCGTTGAAAGAAGATTTGAGTTTGATTACATTGATTAGAGATTTATTAAACATTTGAAATCATTTTGAACTCAAACTTACAGGTTCAAAAACTAAACGGTGTAATTTTGTCTGATTCAGAATATCTTCAACTGCTCGAGAGGAGAGACATTAATATTCTGGTTGCAGCTCGAGGACGTGGCTTATTTTGTAAGGAGTAGCATGCTTGTCAATTTCCAAGTACAATTATAAATTGGGCATGCTCAAAAAGTAATTACTCGTGGTCCAGAATTACTATTGGGTAAGGAAGAAAATAACATTTCATTTTCAAAGGTCAATGTTGCTTAGAAATAATGATGAATCAAAGTAAAATCATGTCCCTTTTTTTGGTTGAGATGAGATTAGATTCTTTTGGA

mRNA sequence

TCCCTTCTATCTGTTGTGTTTGTCTTCACCTCCAGATTTTCATTCCCTTTTTGATTTTTTTTTCTCACCGTCGATTCGCCGGAGCTCTGATCCGGTTCCGGAACCTGTCTTCTTCTCTCCTTCTCCTTCTCCCCTTTCTCCATTAGTGCAATTGGAATCCTCTCTCGTTCTCTTCCGTTTGCGGCATTGGCGTTGATTTGATTGAGGCTAAGGCCGGTTCTGTTCCAAGCAGAGCAACAATTGGCATCAAAGGAGCTTTGTTAATCCGTCAGGGAATGGAGGGAGTGGATTCGTTTGTGCGTTGTGAGTTCTGAGCCTTGAGGAGCTCGGAAGGTTCTGAACTTGGGAGGGAGGAAGAGAGATGGTCCTCATTCGGAGAGTTTCGTCGACTTTCCCTCGAGTTTTTGCGTTTGCGAATAGGTCCTTGTGTTCTTTGAATTCTCCGGGCGAGTCCTTGGATTTACCGACCTCTTCCTCTTTCACTCATGGAATCCATGTCTTCCATTGTCCTGATGCCATGGGAATCGTTGCTAAGCTATCGGAATGTATAGCTTCCAGAGGGGGAAACATACTCGGCGCCGATATTTTTGTCCCTGAAAACAAGAACGTCTTCTATTCCAGAAGTTTTATGGCCATTAACTTGGCTGTGATGAATATCCTATTGAACTTTATTATATCTTCAAGGAAGCAATTTGGATTTCTCTTGTGCACTATGCTGAAAGCGAAAACTCAGCTTGAACCACCACCCGTGTCTGACTTTCGTTTTATGTGCAGCCAGTTTCTTTTTGATCCTTGTAAATGGCCTAGGATGCAAATGGATGAAGACTTCCTTAAGATTTCCAAAACATTTAACGCTTGGAAATCTGTTGTCCGAGTACCAGATCAAGACCCCAAGTATAAGATTGCAATTCTTGCTTCAAAACAGGATCATTGTCTGGTTGACTTACTTCATCACTGGCAAGGAGGGAAACTTCCAGTGGAAATAACTTGTGTTATAAGTAATCACGATAGAGCCCCCAACACCCACGTGATGCGATTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCACACATACAATGATAATAAAAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTCGCCAGGTATATGCAGGTATTGTCTGGTAGTTTCTTGAGGAGCTACAGAAATGATGCGTTTAATGCTGGCGTGAAGTTAATTGGTGCTACAAGCCATTTTGTGACAGAAGAACTCGATGCTGGACCAATCATTGAACAGATGGTTGAGAGGGTTTCCCACAGAGATAATTTGCAGAGTTTTGTGCAGAAGTCCGAGACCTTAGAAAAGCAATGTCTAACGAATGCAATTAAATCATACTGTGAGCTGCGCGTTTTGCCATACGAGGAAAACAGGACTGTCAATATCTTCAACTGCTCGAGAGGAGAGACATTAATATTCTGGTTGCAGCTCGAGGACGTGGCTTATTTTGTAAGGAGTAGCATGCTTGTCAATTTCCAAGTACAATTATAAATTGGGCATGCTCAAAAAGTAATTACTCGTGGTCCAGAATTACTATTGGGTAAGGAAGAAAATAACATTTCATTTTCAAAGGTCAATGTTGCTTAGAAATAATGATGAATCAAAGTAAAATCATGTCCCTTTTTTTGGTTGAGATGAGATTAGATTCTTTTGGA

Coding sequence (CDS)

ATGGTCCTCATTCGGAGAGTTTCGTCGACTTTCCCTCGAGTTTTTGCGTTTGCGAATAGGTCCTTGTGTTCTTTGAATTCTCCGGGCGAGTCCTTGGATTTACCGACCTCTTCCTCTTTCACTCATGGAATCCATGTCTTCCATTGTCCTGATGCCATGGGAATCGTTGCTAAGCTATCGGAATGTATAGCTTCCAGAGGGGGAAACATACTCGGCGCCGATATTTTTGTCCCTGAAAACAAGAACGTCTTCTATTCCAGAAGTTTTATGGCCATTAACTTGGCTGTGATGAATATCCTATTGAACTTTATTATATCTTCAAGGAAGCAATTTGGATTTCTCTTGTGCACTATGCTGAAAGCGAAAACTCAGCTTGAACCACCACCCGTGTCTGACTTTCGTTTTATGTGCAGCCAGTTTCTTTTTGATCCTTGTAAATGGCCTAGGATGCAAATGGATGAAGACTTCCTTAAGATTTCCAAAACATTTAACGCTTGGAAATCTGTTGTCCGAGTACCAGATCAAGACCCCAAGTATAAGATTGCAATTCTTGCTTCAAAACAGGATCATTGTCTGGTTGACTTACTTCATCACTGGCAAGGAGGGAAACTTCCAGTGGAAATAACTTGTGTTATAAGTAATCACGATAGAGCCCCCAACACCCACGTGATGCGATTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCACACATACAATGATAATAAAAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTCGCCAGGTATATGCAGGTATTGTCTGGTAGTTTCTTGAGGAGCTACAGAAATGATGCGTTTAATGCTGGCGTGAAGTTAATTGGTGCTACAAGCCATTTTGTGACAGAAGAACTCGATGCTGGACCAATCATTGAACAGATGGTTGAGAGGGTTTCCCACAGAGATAATTTGCAGAGTTTTGTGCAGAAGTCCGAGACCTTAGAAAAGCAATGTCTAACGAATGCAATTAAATCATACTGTGAGCTGCGCGTTTTGCCATACGAGGAAAACAGGACTGTCAATATCTTCAACTGCTCGAGAGGAGAGACATTAATATTCTGGTTGCAGCTCGAGGACGTGGCTTATTTTGTAAGGAGTAGCATGCTTGTCAATTTCCAAGTACAATTATAA

Protein sequence

MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLSECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLKAKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYKIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTYNDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRNDAFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSYCELRVLPYEENRTVNIFNCSRGETLIFWLQLEDVAYFVRSSMLVNFQVQL

Homology

[Close]

BLAST of Carg24860 vs. NCBI nr
Match: XP_022923327.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata] >XP_022923329.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata] >XP_022923330.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165
Identity = 304/374 (81.28%), Postives = 304/374 (81.28%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS
Sbjct: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIASRGGNILGADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASRGGNILGADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY
Sbjct: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 324

[Close]

BLAST of Carg24860 vs. NCBI nr
Match: XP_023551775.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023551776.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023551777.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 4.2e-165
Identity = 303/374 (81.02%), Postives = 303/374 (81.02%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS
Sbjct: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIASRGGNILGADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASRGGNILGADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY
Sbjct: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSGSFLR YRND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRGYRNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 324

[Close]

BLAST of Carg24860 vs. NCBI nr
Match: XP_022965100.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 581.6 bits (1498), Expect = 1.9e-162
Identity = 300/374 (80.21%), Postives = 301/374 (80.48%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           MVLIRRVSS FPRVFAFANRSL SLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS
Sbjct: 1   MVLIRRVSSAFPRVFAFANRSLYSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIASRGGNILGADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASRGGNILGADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAILASKQDHCLVDLLH WQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY
Sbjct: 181 IAILASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSG+FLRSYRND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGNFLRSYRNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 324

[Close]

BLAST of Carg24860 vs. NCBI nr
Match: XP_004147219.1 (PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis sativus] >KGN55850.1 hypothetical protein Csa_3G019900 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 2.7e-156
Identity = 288/374 (77.01%), Postives = 294/374 (78.61%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           M LIRRVSS+FPRVF FANRSL SLNSPGE+LDLPTSSSF HGIHVFHCPDA+GIVAKLS
Sbjct: 1   MALIRRVSSSFPRVFGFANRSLSSLNSPGEALDLPTSSSFAHGIHVFHCPDAVGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIAS+GGNIL ADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASKGGNILNADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAI ASKQDHCLVDLLH WQGGKLPVEITCVISNHDRAPNTHVMRFLERH IAYHYLHTY
Sbjct: 181 IAIFASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRAPNTHVMRFLERHDIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSG+FLRSY ND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGNFLRSYGNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSE LEKQCLTNAI+SY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIRSY 324

[Close]

BLAST of Carg24860 vs. NCBI nr
Match: XP_008448821.1 (PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis melo] >XP_008448824.1 PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis melo] >XP_008448825.1 PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis melo])

HSP 1 Score: 560.1 bits (1442), Expect = 6.0e-156
Identity = 288/374 (77.01%), Postives = 292/374 (78.07%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           M LIRRVSS+FPRVF   NRSL SLNSPGESLDLPTSSSF HGIHVFHCPDA+GIVAKLS
Sbjct: 1   MALIRRVSSSFPRVFGLTNRSLNSLNSPGESLDLPTSSSFAHGIHVFHCPDAVGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIAS+GGNILGADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASKGGNILGADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAI ASKQDHCLVDLLH WQGGKLPVEITCVISNHDR PNTHVMRFLERHGIAYHYLHTY
Sbjct: 181 IAIFASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRDPNTHVMRFLERHGIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSG FLRSY ND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGDFLRSYGNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSE LEKQCLTNAI+SY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIRSY 324

[Close]

BLAST of Carg24860 vs. TAIR10
Match: AT4G17360.1 (Formyl transferase)

HSP 1 Score: 412.5 bits (1059), Expect = 2.8e-115
Identity = 221/376 (58.78%), Postives = 250/376 (66.49%), Query Frame = 0


Query: 3   LIRRVSST----FPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAK 62
           +IRRVS+T         +F   S  S    GESLD   S     G HVFHCPD +GIVAK
Sbjct: 1   MIRRVSTTSCLSATAFRSFTKWSFKSSQFHGESLDSSVSPLLIPGFHVFHCPDVVGIVAK 60

Query: 63  LSECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTM 122
           LS+CIA++GGNILG D+FVPENKNVFYSR                               
Sbjct: 61  LSDCIAAKGGNILGYDVFVPENKNVFYSR------------------------------- 120

Query: 123 LKAKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPK 182
                              S+F+FDP KWPR QMDEDF  I++ F+A  SVVRVP  DPK
Sbjct: 121 -------------------SEFIFDPVKWPRRQMDEDFQTIAQKFSALSSVVRVPSLDPK 180

Query: 183 YKIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLH 242
           YKIA+L SKQDHCLV++LH WQ GKLPV+ITCVISNH+RAPNTHVMRFL+RHGI+YHYL 
Sbjct: 181 YKIALLLSKQDHCLVEMLHKWQDGKLPVDITCVISNHERAPNTHVMRFLQRHGISYHYLP 240

Query: 243 TYNDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND------------------- 302
           T + NK E EILELVK TDFLVLARYMQ+LSG+FL+ Y  D                   
Sbjct: 241 TTDQNKIEEEILELVKGTDFLVLARYMQLLSGNFLKGYGKDVINIHHGLLPSFKGRNPVK 300

Query: 303 -AFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIK 355
            AF+AGVKLIGAT+HFVTEELD+GPIIEQMVERVSHRDNL+SFVQKSE LEK+CL  AIK
Sbjct: 301 QAFDAGVKLIGATTHFVTEELDSGPIIEQMVERVSHRDNLRSFVQKSEDLEKKCLMKAIK 326

[Close]

BLAST of Carg24860 vs. TAIR10
Match: AT5G47435.2 (formyltetrahydrofolate deformylase, putative)

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-113
Identity = 217/374 (58.02%), Postives = 249/374 (66.58%), Query Frame = 0


Query: 3   LIRRVSSTFPRVFAFANR--SLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 62
           +IRR++    R   FA     L S    GESLD   S     G+HVFHC DA+GIVAKLS
Sbjct: 1   MIRRITE---RASGFAKNIPILKSSRFHGESLDSSVSPVLIPGVHVFHCQDAVGIVAKLS 60

Query: 63  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 122
           +CIA++GGNILG D+FVPEN NVFYSR                                 
Sbjct: 61  DCIAAKGGNILGYDVFVPENNNVFYSR--------------------------------- 120

Query: 123 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 182
                            S+F+FDP KWPR Q+DEDF  I++ + A  SVVRVP  DPKYK
Sbjct: 121 -----------------SEFIFDPVKWPRSQVDEDFQTIAQRYGALNSVVRVPSIDPKYK 180

Query: 183 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 242
           IA+L SKQDHCLV++LH WQ GKLPV+ITCVISNH+RA NTHVMRFLERHGI YHY+ T 
Sbjct: 181 IALLLSKQDHCLVEMLHKWQDGKLPVDITCVISNHERASNTHVMRFLERHGIPYHYVSTT 240

Query: 243 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 302
            +NKRE +ILELVK+TDFLVLARYMQ+LSG+FL+ Y  D                    A
Sbjct: 241 KENKREDDILELVKDTDFLVLARYMQILSGNFLKGYGKDVINIHHGLLPSFKGGYPAKQA 300

Query: 303 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           F+AGVKLIGATSHFVTEELD+GPIIEQMVE VSHRDNL+SFVQKSE LEK+CLT AIKSY
Sbjct: 301 FDAGVKLIGATSHFVTEELDSGPIIEQMVESVSHRDNLRSFVQKSEDLEKKCLTRAIKSY 321

[Close]

BLAST of Carg24860 vs. Swiss-Prot
Match: sp|F4JP46|PURU2_ARATH (Formyltetrahydrofolate deformylase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU2 PE=1 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 5.1e-114
Identity = 221/376 (58.78%), Postives = 250/376 (66.49%), Query Frame = 0


Query: 3   LIRRVSST----FPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAK 62
           +IRRVS+T         +F   S  S    GESLD   S     G HVFHCPD +GIVAK
Sbjct: 1   MIRRVSTTSCLSATAFRSFTKWSFKSSQFHGESLDSSVSPLLIPGFHVFHCPDVVGIVAK 60

Query: 63  LSECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTM 122
           LS+CIA++GGNILG D+FVPENKNVFYSR                               
Sbjct: 61  LSDCIAAKGGNILGYDVFVPENKNVFYSR------------------------------- 120

Query: 123 LKAKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPK 182
                              S+F+FDP KWPR QMDEDF  I++ F+A  SVVRVP  DPK
Sbjct: 121 -------------------SEFIFDPVKWPRRQMDEDFQTIAQKFSALSSVVRVPSLDPK 180

Query: 183 YKIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLH 242
           YKIA+L SKQDHCLV++LH WQ GKLPV+ITCVISNH+RAPNTHVMRFL+RHGI+YHYL 
Sbjct: 181 YKIALLLSKQDHCLVEMLHKWQDGKLPVDITCVISNHERAPNTHVMRFLQRHGISYHYLP 240

Query: 243 TYNDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND------------------- 302
           T + NK E EILELVK TDFLVLARYMQ+LSG+FL+ Y  D                   
Sbjct: 241 TTDQNKIEEEILELVKGTDFLVLARYMQLLSGNFLKGYGKDVINIHHGLLPSFKGRNPVK 300

Query: 303 -AFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIK 355
            AF+AGVKLIGAT+HFVTEELD+GPIIEQMVERVSHRDNL+SFVQKSE LEK+CL  AIK
Sbjct: 301 QAFDAGVKLIGATTHFVTEELDSGPIIEQMVERVSHRDNLRSFVQKSEDLEKKCLMKAIK 326

[Close]

BLAST of Carg24860 vs. Swiss-Prot
Match: sp|Q93YQ3|PURU1_ARATH (Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU1 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.8e-112
Identity = 217/374 (58.02%), Postives = 249/374 (66.58%), Query Frame = 0


Query: 3   LIRRVSSTFPRVFAFANR--SLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 62
           +IRR++    R   FA     L S    GESLD   S     G+HVFHC DA+GIVAKLS
Sbjct: 1   MIRRITE---RASGFAKNIPILKSSRFHGESLDSSVSPVLIPGVHVFHCQDAVGIVAKLS 60

Query: 63  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 122
           +CIA++GGNILG D+FVPEN NVFYSR                                 
Sbjct: 61  DCIAAKGGNILGYDVFVPENNNVFYSR--------------------------------- 120

Query: 123 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 182
                            S+F+FDP KWPR Q+DEDF  I++ + A  SVVRVP  DPKYK
Sbjct: 121 -----------------SEFIFDPVKWPRSQVDEDFQTIAQRYGALNSVVRVPSIDPKYK 180

Query: 183 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 242
           IA+L SKQDHCLV++LH WQ GKLPV+ITCVISNH+RA NTHVMRFLERHGI YHY+ T 
Sbjct: 181 IALLLSKQDHCLVEMLHKWQDGKLPVDITCVISNHERASNTHVMRFLERHGIPYHYVSTT 240

Query: 243 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 302
            +NKRE +ILELVK+TDFLVLARYMQ+LSG+FL+ Y  D                    A
Sbjct: 241 KENKREDDILELVKDTDFLVLARYMQILSGNFLKGYGKDVINIHHGLLPSFKGGYPAKQA 300

Query: 303 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           F+AGVKLIGATSHFVTEELD+GPIIEQMVE VSHRDNL+SFVQKSE LEK+CLT AIKSY
Sbjct: 301 FDAGVKLIGATSHFVTEELDSGPIIEQMVESVSHRDNLRSFVQKSEDLEKKCLTRAIKSY 321

[Close]

BLAST of Carg24860 vs. Swiss-Prot
Match: sp|O34990|PURU_BACSU (Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain 168) OX=224308 GN=purU PE=3 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-31
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 180 KIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHT 239
           ++AI  SK+ HCL +L+  WQ G L  EI  VISNH+ A        +ER  I +HY+  
Sbjct: 105 RVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEEA-----RELVERLNIPFHYMKA 164

Query: 240 YNDNKREGE--ILELVK--NTDFLVLARYMQVLSGSFLRSYRN----------------- 299
             D + E E   LEL++  + D +VLARYMQ+L+  F+ ++ N                 
Sbjct: 165 NKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFVSAHPNRIINIHHSFLPAFIGAN 224

Query: 300 ---DAFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTN 359
               A+  GVKLIGATSH+VT +LD GPIIEQ +ERV HRDN ++      T+E+  L  
Sbjct: 225 PYKRAYERGVKLIGATSHYVTNDLDEGPIIEQDIERVDHRDNAEALKNIGRTIERSVLAR 284

[Close]

BLAST of Carg24860 vs. Swiss-Prot
Match: sp|Q55135|PURU_SYNY3 (Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=purU PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.8e-30
Identity = 83/236 (35.17%), Postives = 122/236 (51.69%), Query Frame = 0


Query: 151 QMDEDFLKISKTFNAWKSV---------VRVPDQDPKYKIAILASKQDHCLVDLLHHWQG 210
           Q+D   L   +  +AW  +         +   DQ P  ++A+  SKQDHCL+D+L  W+ 
Sbjct: 54  QLDNFRLSRPELLSAWSQLAEQLQATWQIHFSDQLP--RLALWVSKQDHCLLDILWRWRS 113

Query: 211 GKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTYNDNKREGEILELV----KNTD 270
           G+L  EI  +ISNH       +    ++ GI +H L    +NK   E  EL        D
Sbjct: 114 GELRCEIPLIISNH-----PDLKSIADQFGIDFHCLPITKENKLAQETAELALLKQYQID 173

Query: 271 FLVLARYMQVLSGSFLRSYRN-------------------DAFNAGVKLIGATSHFVTEE 330
            +VLA+Y+Q+L+  F+  + N                    A   GVK+IGAT+H+ T +
Sbjct: 174 LVVLAKYLQILTTDFVVQFPNIINIHHSFLPAFPGANPYHRAHERGVKIIGATAHYATAQ 233

Query: 331 LDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSYCELRVLPYEENRTV 355
           LD GPIIEQ V RVSHRDN+   ++K   LE+  L  A++ + + R+L Y +NRTV
Sbjct: 234 LDEGPIIEQDVVRVSHRDNVDDLIRKGRDLERVVLARAVRLHLQHRILVY-DNRTV 281

[Close]

BLAST of Carg24860 vs. Swiss-Prot
Match: sp|Q46339|PURU_CORS1 (Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain P-1) OX=69006 GN=purU PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-26
Identity = 80/205 (39.02%), Postives = 110/205 (53.66%), Query Frame = 0


Query: 174 DQDPKYKIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIA 233
           ++  K K+ I+ SK +HCL DLL     G LP+E+  V SNH   P+   +  +E +GI 
Sbjct: 85  ERGQKTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH---PDHRSL--VEWYGIG 144

Query: 234 YHYLHTYNDNK--REGEILELVKNT--DFLVLARYMQVLSG---------------SFLR 293
           +H++    D K   E  +LEL+  T  + +VLARYMQVLS                SFL 
Sbjct: 145 FHHIPISKDTKPRAEAALLELIDQTGAELVVLARYMQVLSDHLASELTGKTINIHHSFLP 204

Query: 294 SYR-----NDAFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLE 353
           S++     + A+  GVK +GAT+H+V  ELD GPII Q V  V H    Q  V      E
Sbjct: 205 SFKGAKPYHQAWERGVKTVGATAHYVNSELDEGPIIAQQVVEVDHTYGPQDLVAAGRDSE 264

Query: 354 KQCLTNAIKSYCELRVLPYEENRTV 355
            + L+NA++ +CE RV  Y  NRTV
Sbjct: 265 CKALSNAVRWHCEGRVFLY-GNRTV 283

[Close]

BLAST of Carg24860 vs. TrEMBL
Match: tr|A0A0A0L1I1|A0A0A0L1I1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019900 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 1.8e-156
Identity = 288/374 (77.01%), Postives = 294/374 (78.61%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           M LIRRVSS+FPRVF FANRSL SLNSPGE+LDLPTSSSF HGIHVFHCPDA+GIVAKLS
Sbjct: 1   MALIRRVSSSFPRVFGFANRSLSSLNSPGEALDLPTSSSFAHGIHVFHCPDAVGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIAS+GGNIL ADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASKGGNILNADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAI ASKQDHCLVDLLH WQGGKLPVEITCVISNHDRAPNTHVMRFLERH IAYHYLHTY
Sbjct: 181 IAIFASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRAPNTHVMRFLERHDIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSG+FLRSY ND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGNFLRSYGNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSE LEKQCLTNAI+SY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIRSY 324

[Close]

BLAST of Carg24860 vs. TrEMBL
Match: tr|A0A1S3BKL6|A0A1S3BKL6_CUCME (formyltetrahydrofolate deformylase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490874 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 4.0e-156
Identity = 288/374 (77.01%), Postives = 292/374 (78.07%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           M LIRRVSS+FPRVF   NRSL SLNSPGESLDLPTSSSF HGIHVFHCPDA+GIVAKLS
Sbjct: 1   MALIRRVSSSFPRVFGLTNRSLNSLNSPGESLDLPTSSSFAHGIHVFHCPDAVGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           ECIAS+GGNILGADIFVPENKNVFYSR                                 
Sbjct: 61  ECIASKGGNILGADIFVPENKNVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK
Sbjct: 121 -----------------SQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IAI ASKQDHCLVDLLH WQGGKLPVEITCVISNHDR PNTHVMRFLERHGIAYHYLHTY
Sbjct: 181 IAIFASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRDPNTHVMRFLERHGIAYHYLHTY 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
           NDNKREGEILELVKNTDFLVLARYMQVLSG FLRSY ND                    A
Sbjct: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGDFLRSYGNDVINIHHGLLPSFKGSNPSKQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSE LEKQCLTNAI+SY
Sbjct: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIRSY 324

[Close]

BLAST of Carg24860 vs. TrEMBL
Match: tr|W9SED1|W9SED1_9ROSA (Formyltetrahydrofolate deformylase OS=Morus notabilis OX=981085 GN=L484_024088 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 7.1e-129
Identity = 245/392 (62.50%), Postives = 287/392 (73.21%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGES-LDLPTS--SSFTHGIHVFHCPDAMGIVA 60
           M ++RR S+  P++   ANRSL S   PG+S LD  TS  SS +HGIHVFHCPDA+GIVA
Sbjct: 1   MTVVRRASAELPKLLGLANRSLKSFAFPGKSLLDSSTSPPSSLSHGIHVFHCPDAVGIVA 60

Query: 61  KLSECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQ-----FG 120
           KLS+CIASRGGNILGAD+FVPE K VFYSR    +  ++  I      + +K+     F 
Sbjct: 61  KLSDCIASRGGNILGADVFVPEKKRVFYSRRSRRLETSITGIRPYSRNTKKKEGPFCSFL 120

Query: 121 FLLC--TMLKAKTQLEPPPVSDFRF-----MC---SQFLFDPCKWPRMQMDEDFLKISKT 180
           +  C   +++     +     ++       +C   S+F+FDP KWPR QMDEDFLKISKT
Sbjct: 121 YFECGNKLIETYDSFKSKIFGEYILGKLIRLCKPGSEFIFDPAKWPRPQMDEDFLKISKT 180

Query: 181 FNAWKSVVRVPDQDPKYKIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTH 240
           FNA KSVVRVP+ DPKYKIA+L SKQ+HCL+D LH WQ G+LPV+ITCVISNHDR PNTH
Sbjct: 181 FNAMKSVVRVPEHDPKYKIAVLVSKQEHCLIDSLHQWQDGRLPVDITCVISNHDRGPNTH 240

Query: 241 VMRFLERHGIAYHYLHTYNDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--- 300
           V RFLERHGI YHYL T N+NKREGEILELV+NTDFLVLARYMQ+LSG+FL++Y  D   
Sbjct: 241 VFRFLERHGIPYHYLRTANNNKREGEILELVQNTDFLVLARYMQILSGNFLKNYGKDIIN 300

Query: 301 -----------------AFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFV 355
                            AF+ GVKLIGATSHFVTEELD GPIIEQMVERVSHRDNLQSFV
Sbjct: 301 IHHGLLPSFKGGNPSKQAFDTGVKLIGATSHFVTEELDCGPIIEQMVERVSHRDNLQSFV 360

[Close]

BLAST of Carg24860 vs. TrEMBL
Match: tr|A0A2P5FIT8|A0A2P5FIT8_9ROSA (Formyltetrahydrofolate deformylase OS=Trema orientalis OX=63057 GN=TorRG33x02_066040 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 7.9e-128
Identity = 238/375 (63.47%), Postives = 268/375 (71.47%), Query Frame = 0


Query: 1   MVLIRRVSSTFP-RVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKL 60
           M+L+RR S   P ++   ANRS  SL  PG+S+D P  SS  HGIHVFHCPDA+GIVAKL
Sbjct: 1   MILVRRASPEVPKKLVGIANRSFKSLRIPGDSIDSPNPSSLNHGIHVFHCPDAVGIVAKL 60

Query: 61  SECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTML 120
           SECIASRGGNILGAD+FVPENK+VFYSR                                
Sbjct: 61  SECIASRGGNILGADVFVPENKHVFYSR-------------------------------- 120

Query: 121 KAKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKY 180
                             S+F+FDP KWPR QMDEDFLK+S TFNA +SVVRVPD DPKY
Sbjct: 121 ------------------SEFIFDPAKWPRSQMDEDFLKLSNTFNAMRSVVRVPDLDPKY 180

Query: 181 KIAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHT 240
           KIA+L SKQ+HCL+DLLH WQ G+LPVEITCVISNHDR PNTHV+RFL+RHGI YH + T
Sbjct: 181 KIAVLVSKQEHCLIDLLHQWQDGRLPVEITCVISNHDRGPNTHVLRFLQRHGIPYHCIST 240

Query: 241 YNDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND-------------------- 300
             D+K EGEILELV+NTDFLVLARYMQ+LSG FL++Y  D                    
Sbjct: 241 TMDSKSEGEILELVQNTDFLVLARYMQILSGDFLKNYGKDIINIHHGLLPSFKGGHPSKQ 300

Query: 301 AFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKS 355
           AF+AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNL+SFVQKSE LEKQCL+ AIKS
Sbjct: 301 AFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRSFVQKSENLEKQCLSKAIKS 325

[Close]

BLAST of Carg24860 vs. TrEMBL
Match: tr|A0A2P4LJV5|A0A2P4LJV5_QUESU (Formyltetrahydrofolate deformylase 1, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_18060 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.0e-127
Identity = 243/374 (64.97%), Postives = 264/374 (70.59%), Query Frame = 0


Query: 1   MVLIRRVSSTFPRVFAFANRSLCSLNSPGESLDLPTSSSFTHGIHVFHCPDAMGIVAKLS 60
           M L RRVS++ P+V  F NRS  SL  PG+SLD  +SS  THGIHVF CPDA+GIVAKLS
Sbjct: 1   MSLTRRVSTSLPQVIGFGNRSFKSLRFPGQSLDSSSSSVLTHGIHVFQCPDAVGIVAKLS 60

Query: 61  ECIASRGGNILGADIFVPENKNVFYSRSFMAINLAVMNILLNFIISSRKQFGFLLCTMLK 120
           +CIAS+GGNILGAD+FVPENK VFYSR                                 
Sbjct: 61  DCIASKGGNILGADVFVPENKRVFYSR--------------------------------- 120

Query: 121 AKTQLEPPPVSDFRFMCSQFLFDPCKWPRMQMDEDFLKISKTFNAWKSVVRVPDQDPKYK 180
                            SQF+FDP KWPR QMDEDF  +SK FNA +SVVRVPDQDPKYK
Sbjct: 121 -----------------SQFIFDPVKWPREQMDEDFNNLSKMFNAMRSVVRVPDQDPKYK 180

Query: 181 IAILASKQDHCLVDLLHHWQGGKLPVEITCVISNHDRAPNTHVMRFLERHGIAYHYLHTY 240
           IA+LASKQDHCLVDLLH WQ G+LPV+ITCVISNHDR  NTHV+RFLERHGI YHYL T 
Sbjct: 181 IAVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHDRGSNTHVIRFLERHGIPYHYLRTT 240

Query: 241 NDNKREGEILELVKNTDFLVLARYMQVLSGSFLRSYRND--------------------A 300
            +NKREG+ILELV NTDFLVLARYMQ+LSG+FLRSY  D                    A
Sbjct: 241 KENKREGDILELVPNTDFLVLARYMQILSGNFLRSYGKDVINIHHGLLPSFKGGNPSRQA 300

Query: 301 FNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSETLEKQCLTNAIKSY 355
           F AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNL SFVQKSE LEKQCL  AIKSY
Sbjct: 301 FVAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLLSFVQKSENLEKQCLAKAIKSY 324

The following BLAST results are available for this feature:

BLAST of Carg24860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923327.1	1.4e-165	81.28	formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata] >X...	[more]
XP_023551775.1	4.2e-165	81.02	formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. ...	[more]
XP_022965100.1	1.9e-162	80.21	formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita maxima]	[more]
XP_004147219.1	2.7e-156	77.01	PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis sativus]...	[more]
XP_008448821.1	6.0e-156	77.01	PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis melo] >X...	[more]

BLAST of Carg24860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17360.1	2.8e-115	58.78	Formyl transferase	[more]
AT5G47435.2	1.6e-113	58.02	formyltetrahydrofolate deformylase, putative	[more]

BLAST of Carg24860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JP46\|PURU2_ARATH	5.1e-114	58.78	Formyltetrahydrofolate deformylase 2, mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q93YQ3\|PURU1_ARATH	2.8e-112	58.02	Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
sp\|O34990\|PURU_BACSU	4.1e-31	40.89	Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain 168) OX=224308 G...	[more]
sp\|Q55135\|PURU_SYNY3	7.8e-30	35.17	Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
sp\|Q46339\|PURU_CORS1	4.0e-26	39.02	Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain P-1) OX=69006 ...	[more]

BLAST of Carg24860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1I1\|A0A0A0L1I1_CUCSA	1.8e-156	77.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019900 PE=4 SV=1	[more]
tr\|A0A1S3BKL6\|A0A1S3BKL6_CUCME	4.0e-156	77.01	formyltetrahydrofolate deformylase 1, mitochondrial OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|W9SED1\|W9SED1_9ROSA	7.1e-129	62.50	Formyltetrahydrofolate deformylase OS=Morus notabilis OX=981085 GN=L484_024088 P...	[more]
tr\|A0A2P5FIT8\|A0A2P5FIT8_9ROSA	7.9e-128	63.47	Formyltetrahydrofolate deformylase OS=Trema orientalis OX=63057 GN=TorRG33x02_06...	[more]
tr\|A0A2P4LJV5\|A0A2P4LJV5_QUESU	1.0e-127	64.97	Formyltetrahydrofolate deformylase 1, mitochondrial OS=Quercus suber OX=58331 GN...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016742	hydroxymethyl-, formyl- and related transferase activity
GO:0008864	formyltetrahydrofolate deformylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0006189	'de novo' IMP biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036477	Formyl_transf_N_sf
IPR002376	Formyl_transf_N
IPR004810	PurU

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008864	formyltetrahydrofolate deformylase activity
molecular_function	GO:0016742	hydroxymethyl-, formyl- and related transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24860-RA	Carg24860-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004810	Formyltetrahydrofolate deformylase	PRINTS	PR01575	FFH4HYDRLASE	coord: 329..354 score: 30.77 coord: 45..71 score: 35.8
IPR004810	Formyltetrahydrofolate deformylase	PANTHER	PTHR42706	FAMILY NOT NAMED	coord: 279..354 coord: 38..92 coord: 132..282
None	No IPR available	GENE3D	G3DSA:3.40.50.170		coord: 179..279 e-value: 9.6E-24 score: 86.1 coord: 280..358 e-value: 2.3E-22 score: 81.5
None	No IPR available	GENE3D	G3DSA:3.30.70.260		coord: 44..99 e-value: 1.0E-7 score: 34.0
None	No IPR available	SUPERFAMILY	SSF55021	ACT-like	coord: 47..87
IPR002376	Formyl transferase, N-terminal	PFAM	PF00551	Formyl_trans_N	coord: 279..337 e-value: 3.3E-7 score: 30.1 coord: 180..282 e-value: 6.1E-8 score: 32.5
IPR036477	Formyl transferase, N-terminal domain superfamily	SUPERFAMILY	SSF53328	Formyltransferase	coord: 180..354

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24860	Cla005624	Watermelon (97103) v1	carwmB0414
Carg24860	Csa3G019900	Cucumber (Chinese Long) v2	carcuB0448
Carg24860	MELO3C013927	Melon (DHL92) v3.5.1	carmeB0424
Carg24860	ClCG10G002550	Watermelon (Charleston Gray)	carwcgB0410
Carg24860	CSPI03G02550	Wild cucumber (PI 183967)	carcpiB0453
Carg24860	Cucsa.321040	Cucumber (Gy14) v1	carcgyB0483
Carg24860	CmaCh06G007950	Cucurbita maxima (Rimu)	carcmaB0580
Carg24860	CmaCh16G011260	Cucurbita maxima (Rimu)	carcmaB0579
Carg24860	CmoCh06G008150	Cucurbita moschata (Rifu)	carcmoB0564
Carg24860	CmoCh16G011780	Cucurbita moschata (Rifu)	carcmoB0563
Carg24860	Lsi07G012830	Bottle gourd (USVL1VR-Ls)	carlsiB379
Carg24860	Cp4.1LG08g07300	Cucurbita pepo (Zucchini)	carcpeB0586
Carg24860	Cp4.1LG14g09380	Cucurbita pepo (Zucchini)	carcpeB0585
Carg24860	CsGy3G002480	Cucumber (Gy14) v2	carcgybB0424
Carg24860	MELO3C013927.2	Melon (DHL92) v3.6.1	carmedB0427
Carg24860	CsaV3_3G002580	Cucumber (Chinese Long) v3	carcucB0449

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24860	Carg25183	Silver-seed gourd	carcarB434

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24860	Watermelon (97103) v2	carwmbB0440
Carg24860	Wax gourd	carwgoB0502