Carg24771 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTTCGCCAAACTTCTCCGTTCAAAACGGAAATGATTATTTGCAGATCTGTCTTGCAATTGTAATTGCAACTTTATCCGATTTCCAAAGCGTTTTCACATTAATTCTCTGGATTATGCTTCTGGTCCTACTTCGAGTCCAATAATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGGTCGTAATATCTAGCGTGGGTTGAGCCTTTTAGCTCGGTCGAGGGTATATGTCCAAATCAGTTGACTAGTGCTTAGGTTAGCTTATTGTTTTGCTTGTTTTTCCTTTTCTCCTTTATCGGGTACTGCTTGCTTATGGAGGTCGTAATGCAGAATCGCGGTCGTAATCTCTAGCATGGGTTGAGCCTTTTGGCTCCATGTTTTCCTTTCGAGCTAAAAGGCGTCCAATGCCAATGTTAATTGCCTTAATTCATGTGGGATATCTTATTCATAGACAATTCATGAACAATACCACAACACTGATAACAATAATGTGATTTTTTACCATGAATTTGATACCGTCTCTGGTTGAGTGATATCATGGCTGGATGCTTCAAAGAAAATATTTATCCCTTATTTTTCACCATGAGCAAGTTCATCTTTCATATGAGATTCGAAAATGTTCTGTTTCAATGATTATTTTATAATATCGGTCAACTAATCAGATCATTTTGCGCACGAACACGATCCTGTTCATAACGAAAAATCTAGTTTCTTTGCTTATGGTAGGTGTTGGATGATAAAAGTCCCACATCTGCTAATTTAGGGAATGATCATGGGTTTATAAATAAATAATACTCCCTCCGTTGGTATGAGGCCTTTTCGGTTCCCCAAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGTGGAGAATCGTGTTCGTCTAACGGTTGGTCCTCTGAAAATAGATTAGTAAATATTTTCTTTTACTGCTGCAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCGTAGCTTCTTTTTCTCATTTCCTTCATTCACTCTTGATAACATGACTTTGAATGACATAATCTGTTATGTTTGATCTTGCAGCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGGTACGCCATTCTTTAACACGAGATCTTTTACTCTTATTTCCCATTAGAATCACTACTGAACTCAAAAGCTCAAAAGCAAATCTGTGATTTACCAAATCAAAAGATGATGTGATCATGGATGATGGGTTGGTTTGTTGGGTGTGATTATTTTGAAAATTTAGCTCAAATTTAGCCATTTTCATGCAAAAGTTCTAGGTTGATAAAAGTATGTGATTTATTCTTCATACAGAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAATGGAAGCCTGTGTGCCGGCAGGCACATATGGCCAAGAGGTTAGTGGCAAGGCTTTGTTCTTTTTGGGTATATGCTCTATGAATGCCACCACCTCTTTTTTATTCAAAACATTTATCATTGGTGACGACGTATGTATTATCTGGTGCCCTTGAATCGGTAACCATCTTTAGAATGAGGATTAGATTAATATCGTTATCTGAATTTCAATTTTATTGATAAAATATTCCTTAAAAAAAATGATAAAAATTAATATTATAATT TCTGTTCGCCAAACTTCTCCGTTCAAAACGGAAATGATTATTTGCAGATCTGTCTTGCAATTGTAATTGCAACTTTATCCGATTTCCAAAGCGTTTTCACATTAATTCTCTGGATTATGCTTCTGGTCCTACTTCGAGTCCAATAATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAATGGAAGCCTGTGTGCCGGCAGGCACATATGGCCAAGAGGTTAGTGGCAAGGCTTTGTTCTTTTTGGGTATATGCTCTATGAATGCCACCACCTCTTTTTTATTCAAAACATTTATCATTGGTGACGACGTATGTATTATCTGGTGCCCTTGAATCGGTAACCATCTTTAGAATGAGGATTAGATTAATATCGTTATCTGAATTTCAATTTTATTGATAAAATATTCCTTAAAAAAAATGATAAAAATTAATATTATAATT ATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAA MSLEQVNNLMEVRFSLVYWFIVHQYFRLGFCLLMERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHRIKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKHVDSPLDHQSIGRVSFNSPRHQRQAKSPHHQREGNNTTSNSSKRTTRNGVGSDCSIENSPLHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSKMWLFSMGEMIARCHGECVVTLTSAIVTLSSVEREWRGIV
BLAST of Carg24771 vs. NCBI nr
Match: XP_022924640.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 543.9 bits (1400), Expect = 4.2e-151 Identity = 287/296 (96.96%), Postives = 288/296 (97.30%), Query Frame = 0
BLAST of Carg24771 vs. NCBI nr
Match: XP_022924641.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 535.8 bits (1379), Expect = 1.2e-148 Identity = 285/296 (96.28%), Postives = 286/296 (96.62%), Query Frame = 0
BLAST of Carg24771 vs. NCBI nr
Match: XP_022980362.1 (uncharacterized protein LOC111479753 isoform X1 [Cucurbita maxima]) HSP 1 Score: 531.9 bits (1369), Expect = 1.7e-147 Identity = 270/297 (90.91%), Postives = 277/297 (93.27%), Query Frame = 0
BLAST of Carg24771 vs. NCBI nr
Match: XP_022980364.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147 Identity = 270/296 (91.22%), Postives = 275/296 (92.91%), Query Frame = 0
BLAST of Carg24771 vs. NCBI nr
Match: XP_023528496.1 (uncharacterized protein LOC111791404 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 523.1 bits (1346), Expect = 7.7e-145 Identity = 279/296 (94.26%), Postives = 283/296 (95.61%), Query Frame = 0
BLAST of Carg24771 vs. TAIR10
Match: AT3G25070.1 (RPM1 interacting protein 4) HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12 Identity = 81/306 (26.47%), Postives = 121/306 (39.54%), Query Frame = 0
BLAST of Carg24771 vs. TAIR10
Match: AT5G18310.2 (unknown protein) HSP 1 Score: 45.8 bits (107), Expect = 6.6e-05 Identity = 14/34 (41.18%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Carg24771 vs. TAIR10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 42.0 bits (97), Expect = 9.5e-04 Identity = 19/55 (34.55%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of Carg24771 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.9e-11 Identity = 81/306 (26.47%), Postives = 121/306 (39.54%), Query Frame = 0
BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A0A0L7W9|A0A0A0L7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130280 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 3.5e-117 Identity = 222/296 (75.00%), Postives = 241/296 (81.42%), Query Frame = 0
BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A1S3AW92|A0A1S3AW92_CUCME (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103483472 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 5.2e-113 Identity = 217/296 (73.31%), Postives = 236/296 (79.73%), Query Frame = 0
BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A2G2VJ41|A0A2G2VJ41_CAPBA (Uncharacterized protein (Fragment) OS=Capsicum baccatum OX=33114 GN=CQW23_29342 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 9.3e-46 Identity = 128/316 (40.51%), Postives = 180/316 (56.96%), Query Frame = 0
BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A2G3AVA1|A0A2G3AVA1_CAPCH (Uncharacterized protein (Fragment) OS=Capsicum chinense OX=80379 GN=BC332_32904 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45 Identity = 127/316 (40.19%), Postives = 179/316 (56.65%), Query Frame = 0
BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A1U8F6V1|A0A1U8F6V1_CAPAN (RPM1-interacting protein 4-like isoform X2 OS=Capsicum annuum OX=4072 GN=LOC107851076 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45 Identity = 128/316 (40.51%), Postives = 179/316 (56.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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