Carg24727 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24727
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chaperone protein DNAj, putative
Location	Cucurbita_argyrosperma_scaffold_259 : 49836 .. 50517 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCCACCAAGCTCTTCGCATTCCCGATGGCCTCTCTCCCGCTCGCCACCGGATCGCGCCGCTCGCAAGCCAGTTTCTATGATGTTCTCCGCGTCAAGAACAACGCCTCCTCTATCGAGATCAAGACCGCCTACCGGAGTCTGGCCAAGATTTACCATCCTGATTCCGCGAGGAGATCGGAGTGCGATGCTTCTTCTGATGATGATGATTATGGTGATGGATGCAGTTTCCTCGAGATTCACAGTGCGTACGAGACGCTTTCGGATCCGGAAACTAGGGCTCAATACGACCTCGCTTTGGCTTCTTTTACGAGACGGCCGTTTCTTCGATCGCGGTCTAGGCCGCACCGGCGATGGGAAACGGATCAGTGCTGGTAGGGATTTGGTGTGATTTGTGATGATTTTGATTTCTGTACAGAAATAGTTTGAATGTTCTTCGTATTGGAGGAATTTTTCGCGGTCTTGGCCGCACTGGCGATGGGAAACGGATCAGTGCTGGTAGGGATTTGATGTTGATTTGTGATGATTTTGATTTCTGTACAGAAATGGTTTGAATGTTCTTCGTATTGGAGGAATTTTTCGCGGTCTAGGCCGCACCGGCGATGAGAAACGGATCAGTGATGGTAGGGATTTGTTGTTGATTTGTGATGATTTTGATTTCTGTACAGAAATTGTTTGA

mRNA sequence

ATGTCCGCCACCAAGCTCTTCGCATTCCCGATGGCCTCTCTCCCGCTCGCCACCGGATCGCGCCGCTCGCAAGCCAGTTTCTATGATGTTCTCCGCGTCAAGAACAACGCCTCCTCTATCGAGATCAAGACCGCCTACCGGAGTCTGGCCAAGATTTACCATCCTGATTCCGCGAGGAGATCGGAGTGCGATGCTTCTTCTGATGATGATGATTATGGTGATGGATGCAGTTTCCTCGAGATTCACAGTGCGTACGAGACGCTTTCGGATCCGGAAACTAGGGCTCAATACGACCTCGCTTTGGCTTCTTTTACGAGACGGCCGTTTCTTCGATCGCGGTCTAGGCCGCACCGGCGATGGGAAACGGATCAGTGCTGAAATGGTTTGAATGTTCTTCGTATTGGAGGAATTTTTCGCGGTCTAGGCCGCACCGGCGATGAGAAACGGATCAGTGATGGTAGGGATTTGTTGTTGATTTGTGATGATTTTGATTTCTGTACAGAAATTGTTTGA

Coding sequence (CDS)

ATGTCCGCCACCAAGCTCTTCGCATTCCCGATGGCCTCTCTCCCGCTCGCCACCGGATCGCGCCGCTCGCAAGCCAGTTTCTATGATGTTCTCCGCGTCAAGAACAACGCCTCCTCTATCGAGATCAAGACCGCCTACCGGAGTCTGGCCAAGATTTACCATCCTGATTCCGCGAGGAGATCGGAGTGCGATGCTTCTTCTGATGATGATGATTATGGTGATGGATGCAGTTTCCTCGAGATTCACAGTGCGTACGAGACGCTTTCGGATCCGGAAACTAGGGCTCAATACGACCTCGCTTTGGCTTCTTTTACGAGACGGCCGTTTCTTCGATCGCGGTCTAGGCCGCACCGGCGATGGGAAACGGATCAGTGCTGA

Protein sequence

MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRWETDQC

Homology

[Close]

BLAST of Carg24727 vs. NCBI nr
Match: XP_022936967.1 (chaperone protein dnaJ 11, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 7.3e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR
Sbjct: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120
           SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW
Sbjct: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120

Query: 121 ETDQC 126
           ETDQC
Sbjct: 121 ETDQC 125

[Close]

BLAST of Carg24727 vs. NCBI nr
Match: XP_022936968.1 (chaperone protein dnaJ 11, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 8.1e-62
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR
Sbjct: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120
           SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW
Sbjct: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120

Query: 121 ETDQ 125
           ETDQ
Sbjct: 121 ETDQ 124

[Close]

BLAST of Carg24727 vs. NCBI nr
Match: XP_023536215.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.2 bits (609), Expect = 7.6e-60
Identity = 120/125 (96.00%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MSATKLFAFPMASL LATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDS RR
Sbjct: 1   MSATKLFAFPMASLHLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSTRR 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120
           SECD+  DDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW
Sbjct: 61  SECDSFDDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120

Query: 121 ETDQC 126
           ETDQC
Sbjct: 121 ETDQC 125

[Close]

BLAST of Carg24727 vs. NCBI nr
Match: XP_022940753.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 101/125 (80.80%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MSA  LFA PMAS+ +ATGSRRS ASFYD+LRVKNNASS+EIKTAYRSLAKIYHPDSAR+
Sbjct: 1   MSAANLFAPPMASVHVATGSRRSSASFYDILRVKNNASSVEIKTAYRSLAKIYHPDSARK 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120
           S+CD+ S D    DGCSFLEIH+AYETLSDP TRA YDLALA+ TRR FLRSRSRPHRRW
Sbjct: 61  SDCDSFSSD----DGCSFLEIHNAYETLSDPATRAHYDLALAALTRRAFLRSRSRPHRRW 120

Query: 121 ETDQC 126
           ETDQC
Sbjct: 121 ETDQC 121

[Close]

BLAST of Carg24727 vs. NCBI nr
Match: XP_023525212.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47
Identity = 100/125 (80.00%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MSA  LFA PMAS+ +ATGSRRS ASFYD+LRVKNNASS+EIKTAYRSLAKIYHPDSAR+
Sbjct: 1   MSAANLFAPPMASVHVATGSRRSSASFYDILRVKNNASSVEIKTAYRSLAKIYHPDSARK 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRW 120
           S+CD+ S D    DGCSFLEIH+AY+TLSDP TRA YDLALA+ TRR FLRSRSRPHRRW
Sbjct: 61  SDCDSFSSD----DGCSFLEIHNAYQTLSDPATRAHYDLALAALTRRAFLRSRSRPHRRW 120

Query: 121 ETDQC 126
           ETDQC
Sbjct: 121 ETDQC 121

[Close]

BLAST of Carg24727 vs. TAIR10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-18
Identity = 55/118 (46.61%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 15  PLATGS-RRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYG 74
           P  T S RR  +S Y++L+V   AS  EIKTAYRSLAK+YHPD++               
Sbjct: 52  PAVTESVRRRVSSLYELLKVNETASLTEIKTAYRSLAKVYHPDASE-------------S 111

Query: 75  DGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSR------PHRRWETDQC 126
           DG  F+EIH AY TL+DP TRA YD  L    RR    +  R        RRWETDQC
Sbjct: 112 DGRDFMEIHKAYATLADPTTRAIYDSTLRVPRRRVHAGAMGRSGRVYATTRRWETDQC 156

[Close]

BLAST of Carg24727 vs. TAIR10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 3.4e-14
Identity = 51/111 (45.95%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 25  ASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIHSA 84
           AS YDVL V   A+S +IK+AYR LA+I HPD A      +SS D+       F++IH+A
Sbjct: 64  ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADE-------FMKIHAA 123

Query: 85  YETLSDPETRAQYDLALASFTRRPFLRSR----------SRPHRRWETDQC 126
           Y TLSDPE R+ YD       RR   RSR          S   R WETDQC
Sbjct: 124 YCTLSDPEKRSVYD-------RRMLRRSRPLTVGTSGLGSYVGRNWETDQC 160

[Close]

BLAST of Carg24727 vs. TAIR10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 5.8e-14
Identity = 48/96 (50.00%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 37  ASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQ 96
           ++S EIK+AYR LA+I HPD AR S  ++S+DD        F++IH+AY TLSDPE RA 
Sbjct: 79  STSQEIKSAYRRLARICHPDVARNSRDNSSADD--------FMKIHAAYCTLSDPEKRAV 138

Query: 97  YDLALASFTRRPFLRSR-------SRPHRRWETDQC 126
           YD       RR  LRSR       S   R WETDQC
Sbjct: 139 YD-------RRTLLRSRPLTAGYGSYGGRNWETDQC 159

[Close]

BLAST of Carg24727 vs. TAIR10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.9e-10
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 22  RSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEI 81
           R+   FY VL V  NA+  EIK+AYR LA+ YHPD  +    DA ++D        F EI
Sbjct: 81  RADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNK----DAGAED-------KFKEI 140

Query: 82  HSAYETLSDPETRAQYD 99
            +AYE LSD E R+ YD
Sbjct: 141 SNAYEILSDDEKRSLYD 146

[Close]

BLAST of Carg24727 vs. TAIR10
Match: AT2G22360.1 (DNAJ heat shock family protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-09
Identity = 38/87 (43.68%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 15  PLATGSR---RSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDD 74
           P   GSR   R+ A +Y VL V  NA+  EIK+AYR LA+ YHPD            + D
Sbjct: 72  PPRRGSRFTVRADADYYSVLGVSKNATKAEIKSAYRKLARNYHPDV-----------NKD 131

Query: 75  YGDGCSFLEIHSAYETLSDPETRAQYD 99
            G    F EI +AYE LSD E ++ YD
Sbjct: 132 PGAEEKFKEISNAYEVLSDDEKKSLYD 147

[Close]

BLAST of Carg24727 vs. Swiss-Prot
Match: sp|Q9FYB5|DNJ11_ARATH (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 6.2e-13
Identity = 51/111 (45.95%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 25  ASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIHSA 84
           AS YDVL V   A+S +IK+AYR LA+I HPD A      +SS D+       F++IH+A
Sbjct: 64  ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADE-------FMKIHAA 123

Query: 85  YETLSDPETRAQYDLALASFTRRPFLRSR----------SRPHRRWETDQC 126
           Y TLSDPE R+ YD       RR   RSR          S   R WETDQC
Sbjct: 124 YCTLSDPEKRSVYD-------RRMLRRSRPLTVGTSGLGSYVGRNWETDQC 160

[Close]

BLAST of Carg24727 vs. Swiss-Prot
Match: sp|Q67S53|DNAJ_SYMTH (Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 21 RRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLE 80
          R ++  +Y++L V  NA+  EIK A+R+LA+ YHP        DA+ DD D  +   F E
Sbjct: 3  RLAKRDYYEILGVPRNATEAEIKKAFRNLARKYHP--------DANKDDPDAAE--KFKE 62

Query: 81 IHSAYETLSDPETRAQYD 99
          I+ AY+ LSDPE RA+YD
Sbjct: 63 INEAYQVLSDPEKRARYD 70

[Close]

BLAST of Carg24727 vs. Swiss-Prot
Match: sp|O66921|DNAJ2_AQUAE (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 23  SQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIH 82
           ++  +Y++L V  NAS  EIK AYR L + YHPD  ++ EC+             F EI+
Sbjct: 5   TKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEE-----------KFKEIN 64

Query: 83  SAYETLSDPETRAQYDL 100
            AY+ LSDPE R  YD+
Sbjct: 65  EAYQVLSDPEKRKLYDM 70

[Close]

BLAST of Carg24727 vs. Swiss-Prot
Match: sp|Q5WHG0|DNAJ_BACSK (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 23 SQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIH 82
          S+  +Y+VL V  NAS  E+K AYR LA+ YHPD  +  + +A            F E+ 
Sbjct: 2  SKRDYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEA-----------KFKEVK 61

Query: 83 SAYETLSDPETRAQYD 99
           AY+TLSDP+ +A+YD
Sbjct: 62 EAYDTLSDPQKKARYD 66

[Close]

BLAST of Carg24727 vs. Swiss-Prot
Match: sp|Q9NVH1|DJC11_HUMAN (DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 27  FYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFLEIHSAYE 86
           +Y +L V+  ASS E+K AYR L  +YHPD  R  E  + ++         F  +H AYE
Sbjct: 15  YYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAER-------LFNLVHQAYE 74

Query: 87  TLSDPETRAQYDL 100
            LSDP+TRA YD+
Sbjct: 75  VLSDPQTRAIYDI 80

[Close]

BLAST of Carg24727 vs. TrEMBL
Match: tr|A0A0A0K365|A0A0A0K365_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G190690 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.8e-40
Identity = 94/128 (73.44%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 1   MSATKLFAFPMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARR 60
           MS+ KLFA P   +P+A GSRRS  SFYDVLRV +NASS+EIKTAYR+LAKIYHPDS RR
Sbjct: 1   MSSIKLFASP---IPIA-GSRRSSPSFYDVLRVNHNASSLEIKTAYRTLAKIYHPDSVRR 60

Query: 61  SECDASSDDDDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLR---SRSRPH 120
           S+CD+  D     DG SFLEIH+AYETLSDP TRA YDLALA+ TRRPFLR   SRSRPH
Sbjct: 61  SDCDSPFD-----DGSSFLEIHNAYETLSDPATRAHYDLALAALTRRPFLRSSSSRSRPH 119

Query: 121 RRWETDQC 126
           RRWETDQC
Sbjct: 121 RRWETDQC 119

[Close]

BLAST of Carg24727 vs. TrEMBL
Match: tr|A0A218XLQ7|A0A218XLQ7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012177 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 10  PMASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDD 69
           P+A + L   +RR  AS Y+VL+VK  A++ EIKTAYR+LAK+YHPD+  ++E       
Sbjct: 47  PLAEISLPAAARRRPASLYEVLQVKRTATTTEIKTAYRALAKLYHPDALSQTE------- 106

Query: 70  DDYGDGCSFLEIHSAYETLSDPETRAQYDLALASFTRRPFLRSRSRPHRRWETDQC 126
             Y DG  F+EIHSAYETLSDP  RA YDL+L      P  R+   P RRWETDQC
Sbjct: 107 --YDDGRDFIEIHSAYETLSDPAARALYDLSLGRAHLSPGGRAGFYPSRRWETDQC 153

[Close]

BLAST of Carg24727 vs. TrEMBL
Match: tr|A0A2R6P576|A0A2R6P576_ACTCH (Chaperone protein dnaJ 11 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33424 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-20
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 12  ASLPLATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDD 71
           A+ P+ T  RRS  S Y+VLRVK NAS+ EIKTAYRSLAK+YHPD+A      A+   ++
Sbjct: 52  ATAPVET--RRS--SLYEVLRVKRNASATEIKTAYRSLAKLYHPDTA------AAQSVEE 111

Query: 72  YGDGCSFLEIHSAYETLSDPETRAQYDLALA-SFTRRPFLRSRSR-----PHRRWETDQC 126
             DG +F+EIH+AY TLSDP +RA YDL+LA    RR F  + SR     P RRWETDQC
Sbjct: 112 ASDGRNFIEIHNAYATLSDPASRALYDLSLAVGSGRRQFGYAGSRSGGFYPSRRWETDQC 161

[Close]

BLAST of Carg24727 vs. TrEMBL
Match: tr|A0A2R6QD37|A0A2R6QD37_ACTCH (Chaperone protein dnaJ 11 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19307 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-20
Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 17  ATGSRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSA-RRSECDASSDDDDYGDG 76
           A  +RRS  S Y+VLRVK NAS+ EIK AYRSLAK+YHPD+A  +SE  A+       DG
Sbjct: 55  AVETRRS--SLYEVLRVKRNASATEIKAAYRSLAKLYHPDAAPAQSEAAAA-------DG 114

Query: 77  CSFLEIHSAYETLSDPETRAQYDLALASFT-RRPFLRSRSR-----PHRRWETDQC 126
             F+EIH+AY TLSDP  RA YDL+LA+ + RRPF  + +R     P RRWETDQC
Sbjct: 115 RDFIEIHNAYATLSDPAARALYDLSLATGSRRRPFGYAGNRFGGFYPTRRWETDQC 161

[Close]

BLAST of Carg24727 vs. TrEMBL
Match: tr|A9PGZ6|A9PGZ6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_1909s00200g PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19
Identity = 61/111 (54.95%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 20  SRRSQASFYDVLRVKNNASSIEIKTAYRSLAKIYHPDSARRSECDASSDDDDYGDGCSFL 79
           SR S  S YDVLRV   AS +EIK+AYRSLAKIYHPD+    + D    DD+  DG  F+
Sbjct: 63  SRYSTLSLYDVLRVNPAASQVEIKSAYRSLAKIYHPDAFLSHDRD---HDDEQSDGGDFI 122

Query: 80  EIHSAYETLSDPETRAQYDLALASFTRRPFLRSR-----SRPHRRWETDQC 126
           EIHSAYETLSDP  RA YDL+L++  R  + R+          RRWETDQC
Sbjct: 123 EIHSAYETLSDPTARAVYDLSLSAAARCFYRRAAGYSGGDYTTRRWETDQC 170

The following BLAST results are available for this feature:

BLAST of Carg24727 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936967.1	7.3e-63	100.00	chaperone protein dnaJ 11, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]
XP_022936968.1	8.1e-62	100.00	chaperone protein dnaJ 11, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_023536215.1	7.6e-60	96.00	chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940753.1	1.1e-47	80.80	chaperone protein dnaJ 11, chloroplastic-like [Cucurbita moschata]	[more]
XP_023525212.1	2.5e-47	80.00	chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24727 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13310.1	3.9e-18	46.61	Chaperone DnaJ-domain superfamily protein	[more]
AT4G36040.1	3.4e-14	45.95	Chaperone DnaJ-domain superfamily protein	[more]
AT2G17880.1	5.8e-14	50.00	Chaperone DnaJ-domain superfamily protein	[more]
AT4G39960.1	3.9e-10	46.75	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT2G22360.1	3.3e-09	43.68	DNAJ heat shock family protein	[more]

BLAST of Carg24727 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FYB5\|DNJ11_ARATH	6.2e-13	45.95	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ1...	[more]
sp\|Q67S53\|DNAJ_SYMTH	1.4e-09	44.87	Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX...	[more]
sp\|O66921\|DNAJ2_AQUAE	2.4e-09	41.56	Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=...	[more]
sp\|Q5WHG0\|DNAJ_BACSK	4.1e-09	42.11	Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=...	[more]
sp\|Q9NVH1\|DJC11_HUMAN	9.2e-09	43.84	DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2	[more]

BLAST of Carg24727 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K365\|A0A0A0K365_CUCSA	9.8e-40	73.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G190690 PE=4 SV=1	[more]
tr\|A0A218XLQ7\|A0A218XLQ7_PUNGR	1.1e-22	52.59	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012177 PE=4 SV=1	[more]
tr\|A0A2R6P576\|A0A2R6P576_ACTCH	6.6e-20	55.83	Chaperone protein dnaJ 11 like OS=Actinidia chinensis var. chinensis OX=1590841 ...	[more]
tr\|A0A2R6QD37\|A0A2R6QD37_ACTCH	8.6e-20	56.90	Chaperone protein dnaJ 11 like OS=Actinidia chinensis var. chinensis OX=1590841 ...	[more]
tr\|A9PGZ6\|A9PGZ6_POPTR	1.5e-19	54.95	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_1909s00200g PE=2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24727-RA	Carg24727-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 28..46 score: 48.57 coord: 46..61 score: 45.29 coord: 73..93 score: 39.29
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 25..93 e-value: 2.8E-11 score: 53.5
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 27..98 e-value: 1.5E-19 score: 69.7
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 26..101 score: 15.854
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 27..90 e-value: 2.618E-12 score: 56.7849
IPR036869	Chaperone J-domain superfamily	GENE3D	G3DSA:1.10.287.110		coord: 17..111 e-value: 2.6E-21 score: 77.6
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	SSF46565	Chaperone J-domain	coord: 24..104
None	No IPR available	PANTHER	PTHR45432	FAMILY NOT NAMED	coord: 19..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24727	Csa7G190690	Cucumber (Chinese Long) v2	carcuB0464
Carg24727	MELO3C013215	Melon (DHL92) v3.5.1	carmeB0439
Carg24727	CSPI07G09250	Wild cucumber (PI 183967)	carcpiB0469
Carg24727	Cucsa.334280	Cucumber (Gy14) v1	carcgyB0499
Carg24727	CmaCh09G010390	Cucurbita maxima (Rimu)	carcmaB0601
Carg24727	CmoCh09G010450	Cucurbita moschata (Rifu)	carcmoB0586
Carg24727	Lsi02G017910	Bottle gourd (USVL1VR-Ls)	carlsiB391
Carg24727	Cp4.1LG02g00280	Cucurbita pepo (Zucchini)	carcpeB0607
Carg24727	CsGy7G008920	Cucumber (Gy14) v2	carcgybB0440
Carg24727	MELO3C013215.2	Melon (DHL92) v3.6.1	carmedB0442
Carg24727	CsaV3_7G021360	Cucumber (Chinese Long) v3	carcucB0464
Carg24727	Cla97C09G183100	Watermelon (97103) v2	carwmbB0455
Carg24727	Bhi09G001532	Wax gourd	carwgoB0519

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24727	Carg23358	Silver-seed gourd	carcarB088

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24727	Cucurbita maxima (Rimu)	carcmaB0602
Carg24727	Cucurbita moschata (Rifu)	carcmoB0587
Carg24727	Cucurbita pepo (Zucchini)	carcpeB0608
Carg24727	Watermelon (Charleston Gray)	carwcgB0423
Carg24727	Watermelon (97103) v1	carwmB0428