Carg24273 (gene) Silver-seed gourd

Overview
NameCarg24273
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRibulose-phosphate 3-epimerase
LocationCucurbita_argyrosperma_scaffold_352 : 109056 .. 112031 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTTCTTTGTCTTGGAATTTTCGAGAATTAAATCTGTATCTGCAAATTCCTCGCAGTTGAATTACTCGAGTTTTTGATCGGCTAAGCGAGTAAGAGGCAGACGAAAATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAGAGAATGCTTAAATTTGGAGCGGATTGGCTTCACATGGATATTATGGTACCCACACGCTCTCTATTTCTGTTTTCCTGAATCGCCATTTCTCTCCAGTTATAATTGGACGAAGTACCTTTTGATTCTTGCTCCCATTTGGTTCTGTTTCATAACCCAATAATTTGATCCTAGTTTTTGCCTTCTTAGTCTGATTTCCCACCGGTTAGTTCTCGTGTAGTTTAATTTGTTCATAATCTACTTGACTAATTGTTTGAATCGTCTAATTTGTCTGTGCTTTTCTGGGTCTTAATAAAATTTTATCTACCCTAATTTAGTACTTCTGTAGTAATAGTGTAAGGTAGTCCATGGAGGACGAGCAGACTTTTAGCTTCACCAATATTTTCTCTTTGCTACTAATTGTTATAGTCCTGTTTAAAGAATGGATTTTACTTTCTTGTAAATGGGTTGGTGACAGTGTACAGAAAGGCGCATGGAGAGATGCATAATCCAATTAGTGATCTTACAATGACATGCTTGCGAAGTTTGAGATAAATTTATCTGCCATCACATCTGATATCTGTTGTTGCTTTATTTGCAGGATGGGTAGGCTCATTCTTTGCTGATATCATACTCCTCTTGAACTGCAATGTGCTTCATGTGAAAGGGTTTTAAATTTCCCTCTAAATAACTTGACCTCGACCTGTGTGGTGTTTTGATCGCTTCTAGTATCTACTTTCCAGCCACATGCCTGCTTATTTAGCCTGCTTATTTATAAATATTTGCTGAAGAAACTTGAGAAATATCTAGTTTTATTTATTGATGTTATTATTTCTAAAGTAAAAAAAAATGTGAGATCTCGTATCGGTTAGAGAGAAGAACGAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAGACGTGTTTTTAAAACCTTGAGTGTAGCTTAGGGAAAGCCGAAAGAGGACAATATCTACTTTCTTTCCATGTTTATTGGTCTACCTTCAGAACATTCTTTCTGCTACCATCCTTTTGAATAGGAAATAAATCTGGGGCTGCAAACTAAAAAAGTGTTGGCCCCTACACAGAATGAACTATTATCAAGAAAATCACAAAGATTTTTCTTTTAAATGCATCCACATGGTGGCCCCGTGGAAATCTATCCATTATCATTTGGTTGAGTTCATTCTGTAACAGGATTGTGGATCATTTCTCGGTGATGTGATTTGTGCATCATCTGGATTAACATAAGTTGGGCTTGCTTTTCTAGCAAAGTAATAGTTTTTTTGCTTATGCATTTACCGCAGGCACTTTGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGTAATCTTAACCTCTTTGCTTCTTCAGTTTGAGGAATTTGGATTTTTTTTATGACATTACCTGAGTTTATGAGGAATTAATTTCTTGTCTTGCAGGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGGTATATTGTGTTTGAACTTCAGATTTGTTCTACTTCTATGGCATCAAAATTGTTTAACTTTTCTTTCCATCTTCTCTGGTAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCCGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTATGCAATTCATCTTTACATCTTCTCCCCCAATCTCATATCCTTCATTTACAAGGATGTTATAGTTCATTGATATATAGCGCTGCAAAGTGCTTATGGTTTTGTGCAAATGCTGCTTCATCAAATTTTTTATAATTGGTAAGTTATGCTTGTTCTTTTTTTCAATTTTCAGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCTGAAACGATGGATAAGGTTCCATTACTTCGACATTTTTCAATATTCCTTGAGGATTGTCTGATTGGCGTTTCTTGTTGAATCTCATTACTGATTTTAACTTATCCAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTAAATGCAACGTAGCGTGTACTCGTTGCAGTTCAAATTCAGTGTACAGATGGCTGTATGAGGGATGGCTTCTGACTGGTCATTGTTTGCTTTGGTGGGCAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCGAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTATATCCATTCTGAGGAAAAGTGTTGAGGAGGCTCAACAGAACTCTTGATCCTTTAACAAGCTTCAAGAATCCGCCATCAAATCTTGTTATACACTTTTTGCAATTCATACGGGATATTTTTAGATTGATAGAAGTTGATTTGAGTCAAGTGGTGTCACTATAATCTGAACTAACATATGATTCCTTTCTGGTTTTTTATTATGCTGAAATGGATTGGCTTCATGGTGGTTTGGCAATGAAAAACCAGTTCATCATCTCTATGGAGTCAAAGGCTGCATATCTGGCTCAATGTGGCGGCCGGGTGTAATGGCCCGACTTCACCGCTAACCGATATTGTCCTTTTGAGTTTTTCCTCAAGGCTTTTAAAACACCTCTACGAAGAACTCATTTCTCTCCAATTGATGTGAGAACTCATTCCAAGTTTGAAGAAAAGCATATGTTCCAAGTTTGACGAGAAAGAA

mRNA sequence

GGGTTCTTTGTCTTGGAATTTTCGAGAATTAAATCTGTATCTGCAAATTCCTCGCAGTTGAATTACTCGAGTTTTTGATCGGCTAAGCGAGTAAGAGGCAGACGAAAATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAGAGAATGCTTAAATTTGGAGCGGATTGGCTTCACATGGATATTATGTTTTTTTGCTTATGCATTTACCGCAGGCACTTTGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCCGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCTGAAACGATGGATAAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCGAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTATATCCATTCTGAGGAAAAGTGTTGAGGAGGCTCAACAGAACTCTTGATCCTTTAACAAGCTTCAAGAATCCGCCATCAAATCTTGTTATACACTTTTTGCAATTCATACGGGATATTTTTAGATTGATAGAAGTTGATTTGAGTCAAGTGGTGTCACTATAATCTGAACTAACATATGATTCCTTTCTGGTTTTTTATTATGCTGAAATGGATTGGCTTCATGGTGGTTTGGCAATGAAAAACCAGTTCATCATCTCTATGGAGTCAAAGGCTGCATATCTGGCTCAATGTGGCGGCCGGGTGTAATGGCCCGACTTCACCGCTAACCGATATTGTCCTTTTGAGTTTTTCCTCAAGGCTTTTAAAACACCTCTACGAAGAACTCATTTCTCTCCAATTGATGTGAGAACTCATTCCAAGTTTGAAGAAAAGCATATGTTCCAAGTTTGACGAGAAAGAA

Coding sequence (CDS)

ATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAGAGAATGCTTAAATTTGGAGCGGATTGGCTTCACATGGATATTATGTTTTTTTGCTTATGCATTTACCGCAGGCACTTTGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCCGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCTGAAACGATGGATAAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCGAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTATATCCATTCTGA

Protein sequence

MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEVYPF
Homology
[Close]
BLAST of Carg24273 vs. NCBI nr
Match: XP_022992624.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima])

HSP 1 Score: 412.9 bits (1060), Expect = 6.8e-112
Identity = 209/218 (95.87%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD
Sbjct: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. NCBI nr
Match: XP_023551616.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111
Identity = 208/218 (95.41%), Postives = 209/218 (95.87%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD
Sbjct: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. NCBI nr
Match: XP_022939918.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata])

HSP 1 Score: 410.6 bits (1054), Expect = 3.4e-111
Identity = 208/218 (95.41%), Postives = 208/218 (95.41%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD
Sbjct: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

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BLAST of Carg24273 vs. NCBI nr
Match: XP_004138610.1 (PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis sativus] >XP_011649966.1 PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis sativus] >KGN63178.1 hypothetical protein Csa_2G406760 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 6.3e-110
Identity = 205/218 (94.04%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTPIEEVYPLVESENPV++VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLD
Sbjct: 121 SGVALKPGTPIEEVYPLVESENPVDLVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. NCBI nr
Match: XP_023543915.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543923.1 ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 6.3e-110
Identity = 206/218 (94.50%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           +GVALKPGTPIEEVY LVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD
Sbjct: 121 AGVALKPGTPIEEVYALVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. TAIR10
Match: AT3G01850.1 (Aldolase-type TIM barrel family protein)

HSP 1 Score: 352.4 bits (903), Expect = 2.0e-97
Identity = 172/216 (79.63%), Postives = 190/216 (87.96%), Query Frame = 0 

Query: 3   VAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIE 62
           V+ KIAPSMLSSDFANLA+EA RM+  GA+WLHMDIM         HFVPNLTIGAPVIE
Sbjct: 2   VSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIM-------DGHFVPNLTIGAPVIE 61

Query: 63  SLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSG 122
           SLRKHT AYLDCHLMVTNP+DYV   AKAGASGFTFHVEV++DNWQQL+++IKS GM+ G
Sbjct: 62  SLRKHTNAYLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPG 121

Query: 123 VALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIE 182
           VALKPGTP+E+VYPLVE   PVEMVLVMTVEPGFGGQKFMP+ MDKVR LRQKYP+LDI+
Sbjct: 122 VALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQ 181

Query: 183 VDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           VDGGLGPSTID AA+AGANCIVAGSSVFGAPEP +V
Sbjct: 182 VDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDV 210

[Close]
BLAST of Carg24273 vs. TAIR10
Match: AT1G63290.1 (Aldolase-type TIM barrel family protein)

HSP 1 Score: 350.1 bits (897), Expect = 9.8e-97
Identity = 170/218 (77.98%), Postives = 193/218 (88.53%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           +GV+ KIAPSMLSSDFANLA+EA+RM+  GA+WLHMDIM         HFV NLTIGAPV
Sbjct: 2   VGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIM-------DGHFVSNLTIGAPV 61

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHT AYLDCHLMVTNP+DYV+  AKAGASGFTFHVEV+++NWQ+L+++IK+ GM+
Sbjct: 62  IESLRKHTNAYLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMR 121

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
            GVALKPGTP+E+VYPLVE  NPVEMVLVMTVEPGFGGQKFMP  MDKVR LR KYP+LD
Sbjct: 122 PGVALKPGTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALRNKYPTLD 181

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAA+AGANCIVAGSSVFGAP+P +V
Sbjct: 182 IEVDGGLGPSTIDAAAAAGANCIVAGSSVFGAPKPGDV 212

[Close]
BLAST of Carg24273 vs. TAIR10
Match: AT5G61410.1 (D-ribulose-5-phosphate-3-epimerase)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37
Identity = 87/216 (40.28%), Postives = 129/216 (59.72%), Query Frame = 0 

Query: 7   IAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIESLRK 66
           ++PS+LS++FA L  + + +   G DW+H+D+M          FVPN+TIG  V+++LR 
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVM-------DGRFVPNITIGPLVVDALRP 119

Query: 67  HTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVE-VSKDNWQQLIQEIKSKGMKSGVAL 126
            T   LD HLM+  P   V  F KAGA   + H E  S  +  + + +IKS G K+GV L
Sbjct: 120 VTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVL 179

Query: 127 KPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLR----QKYPSLDI 186
            PGTP+  +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K  +  I
Sbjct: 180 NPGTPLSAIEYVLDM---VDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWI 239

Query: 187 EVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSE 218
           EVDGG+ P+       AGAN +VAGS+VFGA + +E
Sbjct: 240 EVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAE 265

[Close]
BLAST of Carg24273 vs. Swiss-Prot
Match: sp|Q9SE42|RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0505700 PE=1 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-100
Identity = 177/215 (82.33%), Postives = 196/215 (91.16%), Query Frame = 0 

Query: 4   AAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIES 63
           AAKIAPSMLSSDFANLA+EA+RM++ GADWLHMDIM         HFVPNLTIGAPVI+S
Sbjct: 6   AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIM-------DGHFVPNLTIGAPVIQS 65

Query: 64  LRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGV 123
           LRKHTKAYLDCHLMVTNP DYVEP AKAGASGFTFH+EVS+DNWQ+LIQ IK+KGM+ GV
Sbjct: 66  LRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGV 125

Query: 124 ALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEV 183
           +L+PGTP+EEV+PLVE+ENPVE+VLVMTVEPGFGGQKFMPE M+KVR LR+KYPSLDIEV
Sbjct: 126 SLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV 185

Query: 184 DGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           DGGLGPSTID AASAGANCIVAGSS+FGA EP EV
Sbjct: 186 DGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEV 213

[Close]
BLAST of Carg24273 vs. Swiss-Prot
Match: sp|O14105|RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC31G5.05c PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.5e-58
Identity = 119/219 (54.34%), Postives = 151/219 (68.95%), Query Frame = 0 

Query: 3   VAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIE 62
           V AKIAPS+L+ DFANL  E  RMLK+G+DWLH+D+M          FVPNLTIG  V++
Sbjct: 2   VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVM-------DAQFVPNLTIGPIVVK 61

Query: 63  SLRKH---TKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGM 122
           ++R H    +A+ DCHLMV  P  Y++  A AGAS F FH E ++ + +++I     KGM
Sbjct: 62  AMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKH-EEIISRAHEKGM 121

Query: 123 KSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSL 182
             G ALKP TP+E + P VE    ++MVLVMTVEPG GGQ FMPE + KV  LR+KYP+L
Sbjct: 122 LVGCALKPKTPVEVILPFVEK---LDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTL 181

Query: 183 DIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           ++EVDGGL   T+DAAA AGAN IVAG++VF A  P EV
Sbjct: 182 NVEVDGGLSLKTVDAAADAGANVIVAGTAVFHAQSPEEV 209

[Close]
BLAST of Carg24273 vs. Swiss-Prot
Match: sp|Q6FL81|RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPE1 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-55
Identity = 115/231 (49.78%), Postives = 149/231 (64.50%), Query Frame = 0 

Query: 7   IAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIESLRK 66
           IAPS+L+SDFANL  E  R++  GA+WLH+D+M         HFVPN+T+G P++ SLR+
Sbjct: 6   IAPSILASDFANLGCECHRVINSGAEWLHIDVM-------DGHFVPNITLGQPIVTSLRR 65

Query: 67  ----------------HTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQL 126
                              A+ DCH+MV  P  +V  FAKAGA  FTFH E +KD    L
Sbjct: 66  AVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEATKDP-LSL 125

Query: 127 IQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVR 186
           ++ IK  G+K+  A+KPGTP++ ++ L      ++M LVMTVEPGFGGQKFMP+ M KV 
Sbjct: 126 VKLIKENGIKAACAIKPGTPVDVLFELAPY---LDMALVMTVEPGFGGQKFMPDMMPKVE 185

Query: 187 KLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEVYPF 222
            LR K+P ++I+VDGGLG  TI  AA AGAN IVAG+SVF A +P EV  F
Sbjct: 186 ALRTKFPHMNIQVDGGLGKETIGVAAKAGANVIVAGTSVFTASDPHEVISF 225

[Close]
BLAST of Carg24273 vs. Swiss-Prot
Match: sp|P46969|RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPE1 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55
Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 0 

Query: 7   IAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIESLR- 66
           IAPS+L+SDFANL  E  +++  GADWLH+D+M         HFVPN+T+G P++ SLR 
Sbjct: 6   IAPSILASDFANLGCECHKVINAGADWLHIDVM-------DGHFVPNITLGQPIVTSLRR 65

Query: 67  ------------KHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQE 126
                       K   A+ DCH+MV NP  +V+ FAK GA  FTFH E ++D    L++ 
Sbjct: 66  SVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDP-LHLVKL 125

Query: 127 IKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLR 186
           IKSKG+K+  A+KPGT ++ ++ L      ++M LVMTVEPGFGGQKFM + M KV  LR
Sbjct: 126 IKSKGIKAACAIKPGTSVDVLFELAPH---LDMALVMTVEPGFGGQKFMEDMMPKVETLR 185

Query: 187 QKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEVYPF 222
            K+P L+I+VDGGLG  TI  AA AGAN IVAG+SVF A +P +V  F
Sbjct: 186 AKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISF 222

[Close]
BLAST of Carg24273 vs. Swiss-Prot
Match: sp|Q755M2|RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RPE1 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-54
Identity = 111/226 (49.12%), Postives = 151/226 (66.81%), Query Frame = 0 

Query: 7   IAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPVIESLRK 66
           IAPS+L+SDFANL     R++  GA+WLH+D+M         HFVPN+T+G P+++SLRK
Sbjct: 6   IAPSILASDFANLECGCHRVINAGAEWLHIDVM-------DGHFVPNITLGPPIVKSLRK 65

Query: 67  -----------HTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIK 126
                        KA+ DCH+MV  P  +V+ F + GA  FTFH E +K N  +L++ IK
Sbjct: 66  AVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEATK-NPLELVKLIK 125

Query: 127 SKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQK 186
           S+G+++  A+KP TP++ ++ L      ++M LVMTVEPGFGGQKFMP+ M KV  LR+K
Sbjct: 126 SRGIRAACAIKPDTPVDVLFELAPY---LDMALVMTVEPGFGGQKFMPDMMPKVAALREK 185

Query: 187 YPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEVYPF 222
           +P LDI+VDGGLG  TI  AA AGAN IVAG+SVF A +  +V  +
Sbjct: 186 FPQLDIQVDGGLGKETIPHAAKAGANVIVAGTSVFAAADQKDVISY 220

[Close]
BLAST of Carg24273 vs. TrEMBL
Match: tr|A0A0A0LMZ3|A0A0A0LMZ3_CUCSA (Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 4.2e-110
Identity = 205/218 (94.04%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTPIEEVYPLVESENPV++VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLD
Sbjct: 121 SGVALKPGTPIEEVYPLVESENPVDLVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. TrEMBL
Match: tr|A0A1S3B391|A0A1S3B391_CUCME (Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.1e-110
Identity = 204/218 (93.58%), Postives = 206/218 (94.50%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK
Sbjct: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
           SGVALKPGTP+EEVYPLVESENPVE+VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLD
Sbjct: 121 SGVALKPGTPVEEVYPLVESENPVELVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTIDAA SAGANCIVAGSSVFGAPEPSEV
Sbjct: 181 IEVDGGLGPSTIDAATSAGANCIVAGSSVFGAPEPSEV 211

[Close]
BLAST of Carg24273 vs. TrEMBL
Match: tr|W9SGF0|W9SGF0_9ROSA (Ribulose-phosphate 3-epimerase OS=Morus notabilis OX=981085 GN=L484_017617 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.2e-102
Identity = 189/220 (85.91%), Postives = 202/220 (91.82%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCI--YRRHFVPNLTIGA 60
           MGVAAKIAPSMLSSDFANLASEA+RML FGADWLHMDIM   + +    RHFVPNLTIGA
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAQRMLDFGADWLHMDIMGLMVIVLYLNRHFVPNLTIGA 60

Query: 61  PVIESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKG 120
           PVIESLRKH+KAYLDCHLMVTNPLDYVEP  KAGASGFTFHVEVSK+NWQ+L+Q IKSKG
Sbjct: 61  PVIESLRKHSKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQELVQRIKSKG 120

Query: 121 MKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPS 180
           MK GVALKPGTPIEEVYPL+E+ENPVEMVLVMTVEPGFGGQKFM E MDKVR LR+KYP+
Sbjct: 121 MKPGVALKPGTPIEEVYPLIEAENPVEMVLVMTVEPGFGGQKFMLEMMDKVRTLRKKYPA 180

Query: 181 LDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           LDIEVDGGLGPSTI+AAASAGANCIVAGSSVFGA EP+ V
Sbjct: 181 LDIEVDGGLGPSTIEAAASAGANCIVAGSSVFGAAEPAHV 220

[Close]
BLAST of Carg24273 vs. TrEMBL
Match: tr|A0A061ECQ8|A0A061ECQ8_THECC (Ribulose-phosphate 3-epimerase OS=Theobroma cacao OX=3641 GN=TCM_017163 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.5e-102
Identity = 189/218 (86.70%), Postives = 197/218 (90.37%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGV  KIAPSMLSSDFANLASEA+RML FGADWLHMDIM         HFVPNLTIGAPV
Sbjct: 1   MGVTPKIAPSMLSSDFANLASEAKRMLDFGADWLHMDIM-------DGHFVPNLTIGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           IESLRKHTKAYLDCHLMV NP+DYVEP  KAGASGFTFHVE+SKDNWQ+LIQ IKSKGM+
Sbjct: 61  IESLRKHTKAYLDCHLMVANPIDYVEPMGKAGASGFTFHVEISKDNWQELIQRIKSKGMR 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
            GVALKPGTPIEEVYPLV+SENPVEMVLVMTVEPGFGGQKFMPE MDKVR LR+KYPSLD
Sbjct: 121 PGVALKPGTPIEEVYPLVDSENPVEMVLVMTVEPGFGGQKFMPEMMDKVRVLRKKYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTID AASAGANCIVAGSSVFGAPEP+ V
Sbjct: 181 IEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPEPAAV 211

[Close]
BLAST of Carg24273 vs. TrEMBL
Match: tr|M5WTG1|M5WTG1_PRUPE (Ribulose-phosphate 3-epimerase OS=Prunus persica OX=3760 GN=PRUPE_3G303800 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101
Identity = 187/218 (85.78%), Postives = 200/218 (91.74%), Query Frame = 0 

Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMFFCLCIYRRHFVPNLTIGAPV 60
           MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM         HFVPNLT+GAPV
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM-------DGHFVPNLTLGAPV 60

Query: 61  IESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMK 120
           I+SLRKHT+AYLDCHLMVTNPLDYVEP +KAGASGFTFHVEVSK+NWQ+L+Q IKSKGMK
Sbjct: 61  IQSLRKHTEAYLDCHLMVTNPLDYVEPLSKAGASGFTFHVEVSKENWQELVQRIKSKGMK 120

Query: 121 SGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLD 180
            GVALKPGTPIE+VYPLVE ENPVEMVLVMTVEPGFGGQKFMPE M+KVR LR++YPSLD
Sbjct: 121 PGVALKPGTPIEDVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMEKVRTLRERYPSLD 180

Query: 181 IEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEV 219
           IEVDGGLGPSTI+ AASAGANCIVAGSSVFGA +PS V
Sbjct: 181 IEVDGGLGPSTINTAASAGANCIVAGSSVFGASDPSAV 211

The following BLAST results are available for this feature:
BLAST of Carg24273 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022992624.16.8e-11295.87ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima][more]
XP_023551616.11.5e-11195.41ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. ... [more]
XP_022939918.13.4e-11195.41ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata][more]
XP_004138610.16.3e-11094.04PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis sativus]... [more]
XP_023543915.16.3e-11094.50ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [Cucurbita pepo s... [more]
BLAST of Carg24273 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G01850.12.0e-9779.63Aldolase-type TIM barrel family protein[more]
AT1G63290.19.8e-9777.98Aldolase-type TIM barrel family protein[more]
AT5G61410.13.9e-3740.28D-ribulose-5-phosphate-3-epimerase[more]
BLAST of Carg24273 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SE42|RPE1_ORYSJ6.9e-10082.33Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japon... [more]
sp|O14105|RPE_SCHPO8.5e-5854.34Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
sp|Q6FL81|RPE_CANGA1.4e-5549.78Ribulose-phosphate 3-epimerase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /... [more]
sp|P46969|RPE_YEAST1.8e-5550.44Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 /... [more]
sp|Q755M2|RPE_ASHGO2.6e-5449.12Ribulose-phosphate 3-epimerase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.5... [more]
BLAST of Carg24273 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMZ3|A0A0A0LMZ3_CUCSA4.2e-11094.04Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 S... [more]
tr|A0A1S3B391|A0A1S3B391_CUCME7.1e-11093.58Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1[more]
tr|W9SGF0|W9SGF0_9ROSA3.2e-10285.91Ribulose-phosphate 3-epimerase OS=Morus notabilis OX=981085 GN=L484_017617 PE=3 ... [more]
tr|A0A061ECQ8|A0A061ECQ8_THECC5.5e-10286.70Ribulose-phosphate 3-epimerase OS=Theobroma cacao OX=3641 GN=TCM_017163 PE=3 SV=... [more]
tr|M5WTG1|M5WTG1_PRUPE1.6e-10185.78Ribulose-phosphate 3-epimerase OS=Prunus persica OX=3760 GN=PRUPE_3G303800 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006098pentose-phosphate shunt
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004750ribulose-phosphate 3-epimerase activity
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR013785Aldolase_TIM
IPR026019Ribul_P_3_epim
IPR000056Ribul_P_3_epim-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0015976 carbon utilization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004750 ribulose-phosphate 3-epimerase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24273-RACarg24273-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000056Ribulose-phosphate 3-epimerase-likePFAMPF00834Ribul_P_3_epimcoord: 6..210
e-value: 3.2E-67
score: 225.7
IPR000056Ribulose-phosphate 3-epimerase-likeTIGRFAMTIGR01163TIGR01163coord: 6..217
e-value: 4.9E-66
score: 220.1
IPR000056Ribulose-phosphate 3-epimerase-likePANTHERPTHR11749RIBULOSE-5-PHOSPHATE-3-EPIMERASEcoord: 1..218
IPR000056Ribulose-phosphate 3-epimerase-likePROSITEPS01086RIBUL_P_3_EPIMER_2coord: 147..169
IPR000056Ribulose-phosphate 3-epimerase-likeCDDcd00429RPEcoord: 6..218
e-value: 7.31561E-113
score: 323.662
IPR026019Ribulose-phosphate 3-epimerasePIRSFPIRSF001461RPEcoord: 1..220
e-value: 5.5E-77
score: 255.8
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 1..220
e-value: 2.1E-91
score: 307.0
NoneNo IPR availablePANTHERPTHR11749:SF3RIBULOSE-PHOSPHATE 3-EPIMERASEcoord: 1..218
IPR011060Ribulose-phosphate binding barrelSUPERFAMILYSSF51366Ribulose-phoshate binding barrelcoord: 5..218