Carg24269 (gene) Silver-seed gourd

Overview
NameCarg24269
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtoporphyrinogen oxidase
LocationCucurbita_argyrosperma_scaffold_352 : 92870 .. 95321 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTCTACTTCTCGATCAGTCCTTTCTTTCTTGTAAAGTCAGAATCCGAACGGTGAATACCAGATCGGTAGAAGAAGGGACTGCACAAGTCATAACGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGGCCCAACAAGCTGCTACATTTGGAACTGAGCCCACGTCATACGGCCCAACTGCATCTTCTGGGCTCAGCGCTATGTCCGGCCCAACAAGCTGCTACATTTTGGAACTGAGCCCAAGTCATTCGGCCCAACTGGATTTTCTGGACTCAGCGCCATGTCCGGCCCAATGATCTGCTACTTTCGGAACTGAGCCCAATTTTACGGCCCAATAAGCTGCTACATTTGGAACTGAGCCCAAGTCATATGGCCCATTAATATTGACGTCAATGGACCATTAATATTGACGTAAACGGCCCATTAATATTGACGTCAACTGCACATTAATATTGACGTCAACGGCCCATTAATATTGACGTCTTCGGCCCATTCCATTATATTAAAGTCAACGGCCCATCCCAATTAGTCAAAGGCCCATTTAAATTGACAACAACGGCCCATTATTATTACGTCAACGGCTCATTATTATTGACTTCAACGCCCCATTAATATTGACGTCTAATGGCCGATTAATATTGACGTCAACGGCCCATTGAATTGATTGACGTCAAAGGCCCATTAATTTGACGTCTTCGGCCCATCCATTAATATTGACGTCATAGGCCCATCCCATTTATATTGCATCAATGGCCCATTAATATTGACGTCGATAATCCATTAACATCAATGGCCCATTCGAAAGAAACCGGCGGCATTTCCTGTGTACTATACAGTTTATCTCTTATTTTGTTTCCCAAGTTTCACATGGAGGATTCTGAAGAACTTTGACAGAGCATCAGCTTAACCAAGCTACACAGACATGGCCTCGCCAGCCAAACAAGACCAGCGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCGCTAAGCACATCCTCACTTGATTGCATTGATCAACGAGAAACTAATCATTTTTGTAATTATCGTCATTCTGTAATTGGATTGTACTATGAAGTTCCTCACAATGTAACTATCAGCAACTTTCTTGCTATACGAGTCTGCAGCAATTTTCCTTTTCTCCTCAAAATATCTTTCACAAGTTTTGTAAATACGTTTTGTTAGCAGTTTCTGTAGCTATGTAGATCATGCTTTCCTTTTTGAGCCAAATTTTGCTGGATATAGCTTAATTCTTTGCATCTTCTTCGATTTTGTAGCCTCCAGAAAAAGGGTGGCTGTTGTTGGCGCTGGTGTCAGGTGTGTATGTTGTTATCTCCCATATCCTACTTTTTTCTAGCTTCTGCTTATGGGGCGGTGTTCTTACTGATGAGGCACTGAAATAAAGTTTATGTACTAATTTTTGAGTTGGGTAATGATAGTTCGATAATTTAATTGCATTTATGTTTATGAAGATTTAGTTTGATGGAAGTTTATAATGTTGTCTATTTGTCTTTGTTTGGTTTTTTTAAATCAGTATTTTTCACTTAAAATACTGGCTCTGGTTTTTAGTTATGGCTTCAAATTCAAATGTAATTTTCTTTCATCTGGCCAGTACTTTTGTGGGTGAAAAGAAAATCGGTCTATACATGAGTACTGATGCATGAATTGAGAGAAGTAATGCACCACTGGAGACTGTGAGAAACCATTCAATGGATTATCCCGCAGGGACCTAAGTGTTGACTCGGAAAGTCAAAGCTGAAATCCTTTAGAATTGTGGGACGAGATGGAGAAATAGTTGATCATCTCTTCATTAGCGTTCTTTCCTTTTACAGTTGAAGGGTGGCTCTTTATTTTGATCTCTTTTGACTTGTCTCTTTGCTTACCAAAACGTATTGATGAGTGGCTGCTTGAAGCGCTCACAGGAGGTGGTTCAAAGACAAAGCTAAAATCCTTTAGAATTGTGCAATTAGATCCTTTGCTATGACATATCTGAATCCGCATAAACCAAAGAAATTTTAGGAATAGAGAGGTTCTGGAATGAGATGGAATATCAATGCTTCAAAAAATTCCTGAAAGCTCTCACGTGATTCCATTGTTTTGTTCTTTTTCAATAATATTGTTTCTCAGTAATTTGATCATTTCTTTGTCCTGCGTAAACTCAGTATCCTCCAGTGAGGCTGACTTTGATTTTGTGTGTATCATGGTTAAGTGGGCTCGCTGCAGCCTACAAATTGAAATCGCATGGCTTCAATGTTACGGTGCTTGAAGCGGATGGAAGAGCTGGAGGAAAGCTAAGAAGCGTCTCATACAATGGACTTATCTGGGATGAAGGAGCCAATACAATGGCAAGCTTCCTTGAAAATAATTTGACTAGCATTTTTCTTCACTAG

mRNA sequence

ATGAAGCTTCTACTTCTCGATCAGTCCTTTCTTTCTTGTAAAGTCAGAATCCGAACGGTGAATACCAGATCGGTAGAAGAAGGGACTGCACAAGTCATAACGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGGCCCAACAAGCTGCTACATTTGGAACTGAGCCCACGTCATACGGCCCAACTGCATCTTCTGGGCTCAGCGCTATGTCCGGCCCAACAAGCTGCTACATTTTGGAACTGAGCCCAAGTCATTCGGCCCAACTGGATTTTCTGGACTCAGCGCCATCCTCCAGAAAAAGGGTGGCTGTTGTTGGCGCTGGTGTCAGTGGGCTCGCTGCAGCCTACAAATTGAAATCGCATGGCTTCAATGTTACGGTGCTTGAAGCGGATGGAAGAGCTGGAGGAAAGCTAAGAAGCGTCTCATACAATGGACTTATCTGGGATGAAGGAGCCAATACAATGGCAAGCTTCCTTGAAAATAATTTGACTAGCATTTTTCTTCACTAG

Coding sequence (CDS)

ATGAAGCTTCTACTTCTCGATCAGTCCTTTCTTTCTTGTAAAGTCAGAATCCGAACGGTGAATACCAGATCGGTAGAAGAAGGGACTGCACAAGTCATAACGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGACCCAACTACATCTTCTGGACTCAGCGTTATGTTCGGCCCAACAAGCTGCTACATTTGGAACTGAGCCCACGTCATACGGCCCAACTGCATCTTCTGGGCTCAGCGCTATGTCCGGCCCAACAAGCTGCTACATTTTGGAACTGAGCCCAAGTCATTCGGCCCAACTGGATTTTCTGGACTCAGCGCCATCCTCCAGAAAAAGGGTGGCTGTTGTTGGCGCTGGTGTCAGTGGGCTCGCTGCAGCCTACAAATTGAAATCGCATGGCTTCAATGTTACGGTGCTTGAAGCGGATGGAAGAGCTGGAGGAAAGCTAAGAAGCGTCTCATACAATGGACTTATCTGGGATGAAGGAGCCAATACAATGGCAAGCTTCCTTGAAAATAATTTGACTAGCATTTTTCTTCACTAG

Protein sequence

MKLLLLDQSFLSCKVRIRTVNTRSVEEGTAQVITTQLHLLDSALCSTQLHLLDSALCSAQQAATFGTEPTSYGPTASSGLSAMSGPTSCYILELSPSHSAQLDFLDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTMASFLENNLTSIFLH
Homology
[Close]
BLAST of Carg24269 vs. NCBI nr
Match: XP_023551401.1 (protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 105 LDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 164
           + S+ SSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG
Sbjct: 1   MKSSQSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 60

Query: 165 ANTM 169
           ANTM
Sbjct: 61  ANTM 64

[Close]
BLAST of Carg24269 vs. NCBI nr
Match: XP_022992609.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 118.2 bits (295), Expect = 2.8e-23
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 105 LDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 164
           + S+ SSRKRVAVVGAGVSGLAAAYKLK+HGFNVTVLEADGRAGGKLRSVSYNGLIWDEG
Sbjct: 1   MKSSQSSRKRVAVVGAGVSGLAAAYKLKAHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 60

Query: 165 ANTM 169
           ANTM
Sbjct: 61  ANTM 64

[Close]
BLAST of Carg24269 vs. NCBI nr
Match: XP_022938651.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X7 [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 4.8e-23
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 105 LDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 164
           + S+ SSRKRVAVVGAGVSGLAAAYKLKSHGF+VTVLEADGRAGGKLRSVSYNGLIWDEG
Sbjct: 1   MKSSQSSRKRVAVVGAGVSGLAAAYKLKSHGFSVTVLEADGRAGGKLRSVSYNGLIWDEG 60

Query: 165 ANTM 169
           ANTM
Sbjct: 61  ANTM 64

[Close]
BLAST of Carg24269 vs. NCBI nr
Match: XP_023551399.1 (protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551400.1 protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 110 SSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 169
           +SRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM
Sbjct: 11  TSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 69

[Close]
BLAST of Carg24269 vs. NCBI nr
Match: XP_022938644.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 110 SSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 169
           SSRKRVAVVGAGVSGLAAAYKLKSHGF+VTVLEADGRAGGKLRSVSYNGLIWDEGANTM
Sbjct: 35  SSRKRVAVVGAGVSGLAAAYKLKSHGFSVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 93

[Close]
BLAST of Carg24269 vs. TAIR10
Match: AT5G14220.1 (Flavin containing amine oxidoreductase family)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 111 SRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 169
           S KRVAVVGAGVSGLAAAYKLKS G NVTV EADGR GGKLRSV  NGLIWDEGANTM
Sbjct: 15  SGKRVAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTM 72

[Close]
BLAST of Carg24269 vs. TAIR10
Match: AT4G16310.1 (LSD1-like 3)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 94  LSPSHSAQLDFLDSAPS---SRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGK 152
           LS +HS Q+   D  P      K+V V+GAG +GL AA  L+  GF+VTVLEA  R GG+
Sbjct: 596 LSSAHSNQMRGRDCVPCEVIDEKKVIVIGAGPAGLTAARHLQRQGFSVTVLEARSRVGGR 655

[Close]
BLAST of Carg24269 vs. TAIR10
Match: AT3G10390.1 (Flavin containing amine oxidoreductase family protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.5e-06
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 108 APSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKL--RSVSYN--GLIWDE 167
           A SS+  V +VGAG+SGLAAA +L   GF VTVLE   R GG++  + +  N  G   D 
Sbjct: 180 AQSSKSSVIIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKMEANRVGAAADL 239

Query: 168 GANTMASFLENNL 177
           G + +   L N L
Sbjct: 240 GGSVLTGTLGNPL 252

[Close]
BLAST of Carg24269 vs. TAIR10
Match: AT1G65840.1 (polyamine oxidase 4)

HSP 1 Score: 44.7 bits (104), Expect = 7.2e-05
Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0 

Query: 115 VAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTMASFLEN 174
           V V+G+G+SGLAAA  L    F VTVLE+  R GG++ +    G   D GA+ +    + 
Sbjct: 31  VIVIGSGISGLAAARNLSEASFKVTVLESRDRIGGRIHTDYSFGCPVDMGASWLHGVSDE 90

Query: 175 N 176
           N
Sbjct: 91  N 91

[Close]
BLAST of Carg24269 vs. TAIR10
Match: AT1G62830.1 (LSD1-like 1)

HSP 1 Score: 44.3 bits (103), Expect = 9.4e-05
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0 

Query: 115 VAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTMASFLEN 174
           V VVGAG++GL AA +L S GF V VLE   R GG++++    G    +G   MA    +
Sbjct: 268 VVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMKG---GDGVEAMADVGGS 327

Query: 175 NLTSI 180
            LT I
Sbjct: 328 VLTGI 329

[Close]
BLAST of Carg24269 vs. Swiss-Prot
Match: sp|O24164|PPOM_TOBAC (Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 110 SSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 169
           SS KRVAV+GAGVSGLAAAYKLK HG NVTV EA+G+AGGKLRSVS +GLIWDEGANTM
Sbjct: 11  SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTM 69

[Close]
BLAST of Carg24269 vs. Swiss-Prot
Match: sp|Q8S9J1|PPOCM_ARATH (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-20
Identity = 51/58 (87.93%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 111 SRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 169
           S KRVAVVGAGVSGLAAAYKLKS G NVTV EADGR GGKLRSV  NGLIWDEGANTM
Sbjct: 15  SGKRVAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTM 72

[Close]
BLAST of Carg24269 vs. Swiss-Prot
Match: sp|Q94IG7|PPOCM_SPIOL (Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 109 PSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 168
           P S KRVAVVGAGVSGLAAAYKLKS+G NVT+ EAD RAGGKL++V  +GLIWDEGANTM
Sbjct: 39  PISAKRVAVVGAGVSGLAAAYKLKSNGLNVTLFEADSRAGGKLKTVVKDGLIWDEGANTM 98

Query: 169 ASFLENNLTSIF 181
               +  +TS+F
Sbjct: 99  TE-SDEEVTSLF 109

[Close]
BLAST of Carg24269 vs. Swiss-Prot
Match: sp|B5AR80|OXLA_BOTPA (L-amino-acid oxidase (Fragment) OS=Bothrops pauloensis OX=1042543 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 107 SAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRS 154
           SA S+ K V +VGAG+SGL+AAY L + G  VTVLEA  RAGG++R+
Sbjct: 46  SATSNPKHVVIVGAGMSGLSAAYVLANAGHQVTVLEASKRAGGRVRT 92

[Close]
BLAST of Carg24269 vs. Swiss-Prot
Match: sp|Q6TGQ8|OXLA_BOTMO (L-amino-acid oxidase (Fragment) OS=Bothrops moojeni OX=98334 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 107 SAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRS 154
           S  S+ KRV +VGAG+SGL+AAY L + G  VTVLEA  RAGG++++
Sbjct: 34  STTSNPKRVVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGRVKT 80

[Close]
BLAST of Carg24269 vs. TrEMBL
Match: tr|A0A1S3B382|A0A1S3B382_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 109 PSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 168
           P+SRK+VAVVGAGVSGLAAAYKLKSHGF+VTVLEAD RAGGKLRSVSY GLIWDEGANTM
Sbjct: 10  PTSRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERAGGKLRSVSYKGLIWDEGANTM 69

[Close]
BLAST of Carg24269 vs. TrEMBL
Match: tr|A0A1S4DU02|A0A1S4DU02_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 109 PSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 168
           P+SRK+VAVVGAGVSGLAAAYKLKSHGF+VTVLEAD RAGGKLRSVSY GLIWDEGANTM
Sbjct: 10  PTSRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERAGGKLRSVSYKGLIWDEGANTM 69

[Close]
BLAST of Carg24269 vs. TrEMBL
Match: tr|A0A1S3B3W8|A0A1S3B3W8_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 105 LDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 164
           + S+ SSRK+VAVVGAGVSGLAAAYKLKSHGF+VTVLEAD RAGGKLRSVSY GLIWDEG
Sbjct: 1   MKSSQSSRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERAGGKLRSVSYKGLIWDEG 60

Query: 165 ANTM 169
           ANTM
Sbjct: 61  ANTM 64

[Close]
BLAST of Carg24269 vs. TrEMBL
Match: tr|A0A0A0K7K1|A0A0A0K7K1_CUCSA (Protoporphyrinogen oxidase OS=Cucumis sativus OX=3659 GN=Csa_6G007980 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.7e-21
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 105 LDSAPSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEG 164
           + S+ SSRK+VAVVGAGVSGLAAAYKLKSHGF+VTVLEAD R GGKLRSVSY GLIWDEG
Sbjct: 1   MKSSQSSRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERVGGKLRSVSYKGLIWDEG 60

Query: 165 ANTM 169
           ANTM
Sbjct: 61  ANTM 64

[Close]
BLAST of Carg24269 vs. TrEMBL
Match: tr|A0A2I0JSG3|A0A2I0JSG3_PUNGR (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_020337 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-20
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 109 PSSRKRVAVVGAGVSGLAAAYKLKSHGFNVTVLEADGRAGGKLRSVSYNGLIWDEGANTM 168
           PS RKRVAVVGAGVSGLAAAYKLKSHG +VTV EA+GR GGKLRSVS+NGL+WDEGANTM
Sbjct: 11  PSPRKRVAVVGAGVSGLAAAYKLKSHGLSVTVFEAEGRVGGKLRSVSHNGLVWDEGANTM 70

The following BLAST results are available for this feature:
BLAST of Carg24269 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551401.11.3e-2393.75protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X2 [Cucurbita pe... [more]
XP_022992609.12.8e-2392.19protoporphyrinogen oxidase 2, chloroplastic/mitochondrial-like isoform X2 [Cucur... [more]
XP_022938651.14.8e-2392.19protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X7 [Cucurbita ... [more]
XP_023551399.11.1e-2298.31protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X1 [Cucurbita pe... [more]
XP_022938644.11.8e-2298.31protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X1 [Cucurbita ... [more]
BLAST of Carg24269 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14220.11.4e-2187.93Flavin containing amine oxidoreductase family[more]
AT4G16310.11.3e-0647.54LSD1-like 3[more]
AT3G10390.16.5e-0643.84Flavin containing amine oxidoreductase family protein[more]
AT1G65840.17.2e-0540.98polyamine oxidase 4[more]
AT1G62830.19.4e-0543.08LSD1-like 1[more]
BLAST of Carg24269 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O24164|PPOM_TOBAC1.5e-2084.75Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII ... [more]
sp|Q8S9J1|PPOCM_ARATH2.6e-2087.93Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thalian... [more]
sp|Q94IG7|PPOCM_SPIOL1.3e-1970.83Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1[more]
sp|B5AR80|OXLA_BOTPA2.1e-0659.57L-amino-acid oxidase (Fragment) OS=Bothrops pauloensis OX=1042543 PE=1 SV=1[more]
sp|Q6TGQ8|OXLA_BOTMO3.7e-0657.45L-amino-acid oxidase (Fragment) OS=Bothrops moojeni OX=98334 PE=1 SV=1[more]
BLAST of Carg24269 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B382|A0A1S3B382_CUCME3.0e-2191.67Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A1S4DU02|A0A1S4DU02_CUCME3.0e-2191.67Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A1S3B3W8|A0A1S3B3W8_CUCME3.0e-2187.50Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A0A0K7K1|A0A0A0K7K1_CUCSA8.7e-2185.94Protoporphyrinogen oxidase OS=Cucumis sativus OX=3659 GN=Csa_6G007980 PE=3 SV=1[more]
tr|A0A2I0JSG3|A0A2I0JSG3_PUNGR3.3e-2086.67Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_020337 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase
IPR036188FAD/NAD-bd_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24269-RACarg24269-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00419ADXRDTASEcoord: 114..136
score: 46.58
coord: 137..150
score: 31.63
NoneNo IPR availablePANTHERPTHR42923FAMILY NOT NAMEDcoord: 111..170
NoneNo IPR availablePANTHERPTHR42923:SF14PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIALcoord: 111..170
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3DG3DSA:3.50.50.60coord: 103..177
e-value: 1.5E-22
score: 82.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILYSSF51905FAD/NAD(P)-binding domaincoord: 110..174
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 122..177
e-value: 4.7E-16
score: 59.0