Carg24188 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24188
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Blue copper protein
Location	Cucurbita_argyrosperma_scaffold_221 : 252328 .. 253316 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGAAAAAGAATTTTGAAAAATTTTAAGCTTCGTTCTATATAAACATTCGATATCAGCGTCGTTGCTGTTTCAAAGCTCTGATTGTCTCTGTTTCTGTAACGTCAAAGTAGGCTGTGAAAATGGTGATGAAAGTGGCGGTTGTTTTTGTTTTTCTTGTCGCTGTGCGTGCGGTTTATGGTGCTGATATCGTTGTTGGCGGCGATTCTGGGTGGAGTCAGGGGTTTGATTATGATACCTGGGCTGCAGGGCAAGCTTTTAAAGTTGGAGACTCGTTGGGTAATTGTTTGAATTATGAATAGAATGGAATTTGTAGGATGATTCGATTTGGGTTTTGTTTAATTTGTGTAAAAATTGCAGTGTTCAATTATGGTGGGAGTCACTCAGTGGCGGAGGTGAATGAGGCAAGCTACAAGGCGTGTTCGTCGACCTCGGTGATTAGATCTCACACTGGCGGAAGCACGTCGATTCCTCTGTCGGCGACAGGGCCAAGGTACTTCCTCTGTCCGACACTGGGTCACTGTTCCAGCGGCATGAAGCTTCAGATCAATGTTGTGGCTGCCAACGCCACCCCAACCCCACCCGGCACCACCCCACCGGGCAACACCCCACCGGCTAACACCCCACCGGCTGACACCCCCCCATCGCCTCCATCTCCAAGCGCAGGCTCCTCTGCTTTTATCAGTCTCAACCAGTTGATCTCTGGGGCTTCCATTGCCTGCTTCGCCGCCCTGTTTGTTCTATGAGCGTGAGCGGCTTGGGAAGATGCAGTGCTTGGCTTTCTTTCTATATTGTATTTGATTCAATAATTTGTGATCCTTTGTTATCTATTTGGTTGGATTCATGTTGCTTATATTCACCCAAGAGTTCCATAAGAACACACCAACTCACCCCCACTTACGGTGTAAAAGAGGTGTTCCTGTTATGACACTCTTTTCTTCCGTGTGTTTCATATTCTCATATAAATTAAATTTTTATAATTATATTTC

mRNA sequence

AGAGGAAAAAGAATTTTGAAAAATTTTAAGCTTCGTTCTATATAAACATTCGATATCAGCGTCGTTGCTGTTTCAAAGCTCTGATTGTCTCTGTTTCTGTAACGTCAAAGTAGGCTGTGAAAATGGTGATGAAAGTGGCGGTTGTTTTTGTTTTTCTTGTCGCTGTGCGTGCGGTTTATGGTGCTGATATCGTTGTTGGCGGCGATTCTGGGTGGAGTCAGGGGTTTGATTATGATACCTGGGCTGCAGGGCAAGCTTTTAAAGTTGGAGACTCGTTGGTGTTCAATTATGGTGGGAGTCACTCAGTGGCGGAGGTGAATGAGGCAAGCTACAAGGCGTGTTCGTCGACCTCGGTGATTAGATCTCACACTGGCGGAAGCACGTCGATTCCTCTGTCGGCGACAGGGCCAAGGTACTTCCTCTGTCCGACACTGGGTCACTGTTCCAGCGGCATGAAGCTTCAGATCAATGTTGTGGCTGCCAACGCCACCCCAACCCCACCCGGCACCACCCCACCGGGCAACACCCCACCGGCTAACACCCCACCGGCTGACACCCCCCCATCGCCTCCATCTCCAAGCGCAGGCTCCTCTGCTTTTATCAGTCTCAACCAGTTGATCTCTGGGGCTTCCATTGCCTGCTTCGCCGCCCTGTTTGTTCTATGAGCGTGAGCGGCTTGGGAAGATGCAGTGCTTGGCTTTCTTTCTATATTGTATTTGATTCAATAATTTGTGATCCTTTGTTATCTATTTGGTTGGATTCATGTTGCTTATATTCACCCAAGAGTTCCATAAGAACACACCAACTCACCCCCACTTACGGTGTAAAAGAGGTGTTCCTGTTATGACACTCTTTTCTTCCGTGTGTTTCATATTCTCATATAAATTAAATTTTTATAATTATATTTC

Coding sequence (CDS)

ATGGTGATGAAAGTGGCGGTTGTTTTTGTTTTTCTTGTCGCTGTGCGTGCGGTTTATGGTGCTGATATCGTTGTTGGCGGCGATTCTGGGTGGAGTCAGGGGTTTGATTATGATACCTGGGCTGCAGGGCAAGCTTTTAAAGTTGGAGACTCGTTGGTGTTCAATTATGGTGGGAGTCACTCAGTGGCGGAGGTGAATGAGGCAAGCTACAAGGCGTGTTCGTCGACCTCGGTGATTAGATCTCACACTGGCGGAAGCACGTCGATTCCTCTGTCGGCGACAGGGCCAAGGTACTTCCTCTGTCCGACACTGGGTCACTGTTCCAGCGGCATGAAGCTTCAGATCAATGTTGTGGCTGCCAACGCCACCCCAACCCCACCCGGCACCACCCCACCGGGCAACACCCCACCGGCTAACACCCCACCGGCTGACACCCCCCCATCGCCTCCATCTCCAAGCGCAGGCTCCTCTGCTTTTATCAGTCTCAACCAGTTGATCTCTGGGGCTTCCATTGCCTGCTTCGCCGCCCTGTTTGTTCTATGA

Protein sequence

MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAANATPTPPGTTPPGNTPPANTPPADTPPSPPSPSAGSSAFISLNQLISGASIACFAALFVL

Homology

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BLAST of Carg24188 vs. NCBI nr
Match: XP_022922074.1 (uclacyanin-3-like [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 7.5e-69
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           MVMKVAVVFVFLVAVRAV GADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH
Sbjct: 1   MVMKVAVVFVFLVAVRAVNGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA
Sbjct: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAALFVL 180
           NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AFISL QLISGASIACFAALFVL
Sbjct: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFISLKQLISGASIACFAALFVL 180

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BLAST of Carg24188 vs. NCBI nr
Match: XP_023540572.1 (mavicyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.2 bits (687), Expect = 9.8e-69
Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH
Sbjct: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA
Sbjct: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAALFVL 180
           NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FISL+QLI GASIACFAALFVL
Sbjct: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFISLSQLIFGASIACFAALFVL 180

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BLAST of Carg24188 vs. NCBI nr
Match: XP_022975259.1 (uclacyanin-3-like [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68
Identity = 175/180 (97.22%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDY TWAAGQ FKVGDSLVFNYGGSH
Sbjct: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYGTWAAGQVFKVGDSLVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA
Sbjct: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAALFVL 180
           NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS FISLNQLI GASIACF ALFVL
Sbjct: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFISLNQLIFGASIACFTALFVL 180

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BLAST of Carg24188 vs. NCBI nr
Match: XP_022974245.1 (uclacyanin-3-like [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 6.4e-68
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           MVMKVAVVFVFLVAVRAVYGADIVVGGDSGW+QGFDY TWAAGQ FKVGDSLVFNYGGSH
Sbjct: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWNQGFDYGTWAAGQVFKVGDSLVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA
Sbjct: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAALFVL 180
           NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS FISLNQLI GASIACF ALFVL
Sbjct: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFISLNQLIFGASIACFTALFVL 180

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BLAST of Carg24188 vs. NCBI nr
Match: XP_004133765.1 (PREDICTED: uclacyanin-2 [Cucumis sativus] >KGN56342.1 hypothetical protein Csa_3G116790 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48
Identity = 136/177 (76.84%), Postives = 151/177 (85.31%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           M MK A VFV L+AVRAVYGADI+VGG+SGWSQG DYDTWAAGQ F VGD+LVFNYGGSH
Sbjct: 1   MAMKAAAVFVVLIAVRAVYGADIIVGGNSGWSQGVDYDTWAAGQKFNVGDALVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SV EV EA Y ACSS+SVI+SHTGG+TSIPLSA GPRYF+C T+GHC+SGMKLQ+NV+AA
Sbjct: 61  SVDEVKEADYTACSSSSVIKSHTGGTTSIPLSAVGPRYFICSTIGHCASGMKLQVNVLAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAAL 178
           N+T      XXXXXXXXXXXXXXXXXXXXXXXXXXXSAF +LN  I GAS+A   AL
Sbjct: 121 NST------XXXXXXXXXXXXXXXXXXXXXXXXXXXSAFFTLNHFIFGASVATLFAL 171

[Close]

BLAST of Carg24188 vs. TAIR10
Match: AT3G60280.1 (uclacyanin 3)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 6   AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEV 65
           A + +FL AV AV+ A   VG  SGW+   DY  W  G+ F+VGD+L F YG SHSV+ V
Sbjct: 7   AALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVV 66

Query: 66  NEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 121
           ++A Y  C S+   ++   G T I L+  G  +FLCPT GHC +GMKL + V+AA
Sbjct: 67  DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 121

[Close]

BLAST of Carg24188 vs. TAIR10
Match: AT1G72230.1 (Cupredoxin superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 8.4e-22
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 31  WSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEVNEASYKACSSTSVIRSHTGGSTSIP 90
           WS G DY + A G++F VGD++VFNYG  H+V EV+E+ YK+C+  + I S + G+TSI 
Sbjct: 31  WSLGKDYSSLATGKSFAVGDTIVFNYGAGHTVDEVSESDYKSCTLGNAISSDSSGTTSIA 90

Query: 91  LSATGPRYFLCPTLGHCSSGMKLQINVVAANA 123
           L   GP YF+C   GHC+ GMKL + V AA++
Sbjct: 91  LKTPGPHYFICGIPGHCTGGMKLSVIVPAASS 122

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BLAST of Carg24188 vs. TAIR10
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 17  AVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEVNEASYKACSST 76
           AV+     VG + GW+ G +Y +W + + F+VGD+L F YG SHSVA VN+A Y  C ++
Sbjct: 20  AVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPSHSVAVVNKADYDGCETS 79

Query: 77  SVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAANATPTP 127
              +S + G T I L+  G  +FLC T GHCS GMKL + V+AA +   P
Sbjct: 80  RPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAAVSLEPP 129

[Close]

BLAST of Carg24188 vs. TAIR10
Match: AT3G27200.1 (Cupredoxin superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 5   VAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAE 64
           V +VF  L++V+    A  V+GG  GW Q  D+D+W++ Q+FKVGD +VF Y   HSV E
Sbjct: 8   VILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVE 67

Query: 65  V-NEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKL 114
           + +E +YK+C   + + S + G+  + LS TG RYF C T+GHC  GMK+
Sbjct: 68  LGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKI 117

[Close]

BLAST of Carg24188 vs. TAIR10
Match: AT1G22480.1 (Cupredoxin superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 5.4e-21
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 31  WSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEVNEASYKACSSTSVIRSHTGGSTSIP 90
           WS G DY     G+ F VGD++VFNYG  H+V EV+E  YK+C+  + I S + G+T+I 
Sbjct: 27  WSLGTDYTPLTTGKTFSVGDTIVFNYGAGHTVDEVSENDYKSCTLGNSITSDSSGTTTIA 86

Query: 91  LSATGPRYFLCPTLGHCSSGMKLQINVVA 120
           L+ TGPRYF+C   GHC++GMKL + V +
Sbjct: 87  LTTTGPRYFICGIPGHCAAGMKLAVTVAS 115

[Close]

BLAST of Carg24188 vs. Swiss-Prot
Match: sp|Q96316|BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-23
Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 6   AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAEV 65
           A + +FL AV AV+ A   VG  SGW+   DY  W  G+ F+VGD+L F YG SHSV+ V
Sbjct: 7   AALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVV 66

Query: 66  NEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 121
           ++A Y  C S+   ++   G T I L+  G  +FLCPT GHC +GMKL + V+AA
Sbjct: 67  DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 121

[Close]

BLAST of Carg24188 vs. Swiss-Prot
Match: sp|Q41001|BCP_PEA (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-20
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 5   VAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYG-GSHSVA 64
           +A++ + L ++  VY     VG  SGW  G DY TWA+ + F VGDSLVFNYG G+H+V 
Sbjct: 13  LAIINMALPSLATVY----TVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVD 72

Query: 65  EVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINV 118
           EV E+ YK+C+S + I + + G+T+IPL   G  YF+C   GH + GMKL I V
Sbjct: 73  EVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122

[Close]

BLAST of Carg24188 vs. Swiss-Prot
Match: sp|O82081|UCC1_ARATH (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 51/127 (40.16%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGS- 60
           M++ ++V+   L+ +      D  +GG SGW+ G    TWAAGQ F VGD+LVF+Y  + 
Sbjct: 6   MLIIISVLATTLIGL--TVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAF 65

Query: 61  HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVV- 120
           H V EV +  + +C +   + +   G++ +PL+  G RYF+C   GHCS GMKL++NVV 
Sbjct: 66  HDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVP 125

Query: 121 AANATPT 126
            A   PT
Sbjct: 126 TATVAPT 130

[Close]

BLAST of Carg24188 vs. Swiss-Prot
Match: sp|O80517|BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 3   MKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSV 62
           M VA     L+ +  V GA + V     W+ G DY  WA G+ F+VGD L F YG SH+V
Sbjct: 9   MAVAAATALLLVLTIVPGA-VAVTYTIEWTTGVDYSGWATGKTFRVGDILEFKYGSSHTV 68

Query: 63  AEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHC--SSGMKLQINVVAA 122
             V++A Y  C ++S   +H+ G T I L   G  YF+C T GHC  + GMKL +NVVA 
Sbjct: 69  DVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAG 128

[Close]

BLAST of Carg24188 vs. Swiss-Prot
Match: sp|P80728|MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-16
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 25  VGGDSGWSQ--GFDYDTWAAGQAFKVGDSLVFNYGGS-HSVAEVNEASYKACSSTSVIRS 84
           VG  +GW+    +DY  WA+   F VGDSL+FNY    H+V +V++  +K+C+S+S   S
Sbjct: 6   VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAAS 65

Query: 85  HTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINV 118
           +T G+ SIPL   G  YFLC   GHC  G K++I V
Sbjct: 66  YTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101

[Close]

BLAST of Carg24188 vs. TrEMBL
Match: tr|A0A0A0L6X5|A0A0A0L6X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116790 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.5e-49
Identity = 136/177 (76.84%), Postives = 151/177 (85.31%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           M MK A VFV L+AVRAVYGADI+VGG+SGWSQG DYDTWAAGQ F VGD+LVFNYGGSH
Sbjct: 1   MAMKAAAVFVVLIAVRAVYGADIIVGGNSGWSQGVDYDTWAAGQKFNVGDALVFNYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SV EV EA Y ACSS+SVI+SHTGG+TSIPLSA GPRYF+C T+GHC+SGMKLQ+NV+AA
Sbjct: 61  SVDEVKEADYTACSSSSVIKSHTGGTTSIPLSAVGPRYFICSTIGHCASGMKLQVNVLAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAAL 178
           N+T      XXXXXXXXXXXXXXXXXXXXXXXXXXXSAF +LN  I GAS+A   AL
Sbjct: 121 NST------XXXXXXXXXXXXXXXXXXXXXXXXXXXSAFFTLNHFIFGASVATLFAL 171

[Close]

BLAST of Carg24188 vs. TrEMBL
Match: tr|A0A1S4DSP9|A0A1S4DSP9_CUCME (basic blue protein OS=Cucumis melo OX=3656 GN=LOC103483106 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.9e-46
Identity = 135/180 (75.00%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           M MK A VFV L+AVRAVYGADI+VGG SGW+QGF+YDTWA  Q F VGD+LVF+YGGSH
Sbjct: 1   MAMKAAAVFVVLIAVRAVYGADIIVGGSSGWNQGFNYDTWATQQKFTVGDTLVFDYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SV EVNEASY ACSS+SVI+SHTGG+TSIPLSA GPRYF+C T GHC+SGMKLQ+NV+AA
Sbjct: 61  SVDEVNEASYTACSSSSVIKSHTGGTTSIPLSAVGPRYFICSTPGHCASGMKLQVNVLAA 120

Query: 121 NATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFISLNQLISGASIACFAALFVL 180
           N        XXXXXXXXXXXXXXXXXXXXXXXXXXXSAF +LN  I GAS+   A LFVL
Sbjct: 121 N--------XXXXXXXXXXXXXXXXXXXXXXXXXXXSAFFTLNHFIFGASV---ATLFVL 169

[Close]

BLAST of Carg24188 vs. TrEMBL
Match: tr|A0A2G5CI65|A0A2G5CI65_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05300036v1 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31
Identity = 68/126 (53.97%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 1   MVMKVAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSH 60
           M +  A  F FL+ + A Y  D  VG  SGW+QG DY TW AG+ F +GD+L+F YGGSH
Sbjct: 1   MAIATAAFFAFLLVLPAAYAVDYTVGDSSGWNQGTDYTTWTAGKTFNIGDTLLFTYGGSH 60

Query: 61  SVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVAA 120
           SV  VN+A Y +C++ + + SH GGST I LS  GP YF CP LGHCS GMKL + V A 
Sbjct: 61  SVDVVNKADYDSCNTGNALESHNGGSTVITLSKAGPMYFTCPALGHCSGGMKLAVTVSAG 120

Query: 121 NATPTP 127
           + TPTP
Sbjct: 121 STTPTP 126

[Close]

BLAST of Carg24188 vs. TrEMBL
Match: tr|B9SKK1|B9SKK1_RICCO (Uclacyanin-2, putative OS=Ricinus communis OX=3988 GN=RCOM_0658030 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.3e-29
Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 6   AVVFVFLVAVRAVYGADIVVGGDSGWSQ-GFDYDTWAAGQAFKVGDSLVFNYGGSHSVAE 65
           + + + L+AV AVYG +  VGG SGW+  G DY TWAA + F VGD+LVF+YG +H VAE
Sbjct: 5   SALLILLLAVPAVYGVEHDVGGSSGWTNFGVDYSTWAAAETFTVGDTLVFSYGTNHQVAE 64

Query: 66  VNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINV 118
           V+E+ Y +CSS++ I +HTGGST++ LS TG R+F+CPT GHC SGMKL INV
Sbjct: 65  VSESDYNSCSSSNAIETHTGGSTTVTLSKTGKRFFICPTGGHCGSGMKLAINV 117

[Close]

BLAST of Carg24188 vs. TrEMBL
Match: tr|B7FGK4|B7FGK4_MEDTR (Plastocyanin-like domain protein OS=Medicago truncatula OX=3880 GN=25500067 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.9e-29
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 5   VAVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGSHSVAE 64
           +A  FV L+A    +  D  VG  +GW+ G DY  WA+G+ FKVGD+LVF YG SH V E
Sbjct: 6   IASFFVLLLAFPYAFATDFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYGSSHQVDE 65

Query: 65  VNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSS--GMKLQINVVAANA 124
           V+E+ YK+C+S++ I+++ GG++ +PL+  G  YF+CPTLGHC+S  GMKL++NVVAA+ 
Sbjct: 66  VDESDYKSCTSSNAIKNYAGGNSKVPLTKAGKIYFICPTLGHCTSTGGMKLEVNVVAAST 125

Query: 125 TPT 126
           TPT
Sbjct: 126 TPT 128

The following BLAST results are available for this feature:

BLAST of Carg24188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922074.1	7.5e-69	98.33	uclacyanin-3-like [Cucurbita moschata]	[more]
XP_023540572.1	9.8e-69	97.78	mavicyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975259.1	2.9e-68	97.22	uclacyanin-3-like [Cucurbita maxima]	[more]
XP_022974245.1	6.4e-68	96.67	uclacyanin-3-like [Cucurbita maxima]	[more]
XP_004133765.1	1.1e-48	76.84	PREDICTED: uclacyanin-2 [Cucumis sativus] >KGN56342.1 hypothetical protein Csa_3...	[more]

BLAST of Carg24188 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60280.1	2.4e-24	46.96	uclacyanin 3	[more]
AT1G72230.1	8.4e-22	50.00	Cupredoxin superfamily protein	[more]
AT3G60270.1	1.4e-21	44.55	Cupredoxin superfamily protein	[more]
AT3G27200.1	1.9e-21	44.55	Cupredoxin superfamily protein	[more]
AT1G22480.1	5.4e-21	49.44	Cupredoxin superfamily protein	[more]

BLAST of Carg24188 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96316\|BCB3_ARATH	4.3e-23	46.96	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
sp\|Q41001\|BCP_PEA	4.4e-20	47.37	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
sp\|O82081\|UCC1_ARATH	1.4e-18	40.16	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
sp\|O80517\|BCB2_ARATH	3.2e-18	42.98	Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1	[more]
sp\|P80728\|MAVI_CUCPE	3.9e-16	44.79	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Carg24188 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6X5\|A0A0A0L6X5_CUCSA	7.5e-49	76.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116790 PE=4 SV=1	[more]
tr\|A0A1S4DSP9\|A0A1S4DSP9_CUCME	5.9e-46	75.00	basic blue protein OS=Cucumis melo OX=3656 GN=LOC103483106 PE=4 SV=1	[more]
tr\|A0A2G5CI65\|A0A2G5CI65_AQUCA	1.9e-31	53.97	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05300036v1 PE=4...	[more]
tr\|B9SKK1\|B9SKK1_RICCO	2.3e-29	58.41	Uclacyanin-2, putative OS=Ricinus communis OX=3988 GN=RCOM_0658030 PE=4 SV=1	[more]
tr\|B7FGK4\|B7FGK4_MEDTR	3.9e-29	52.03	Plastocyanin-like domain protein OS=Medicago truncatula OX=3880 GN=25500067 PE=2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24188-RA	Carg24188-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 31..111 e-value: 2.1E-25 score: 88.5
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 53..115 e-value: 1.0E-12 score: 175.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 21..119 score: 41.695
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 21..130 e-value: 2.5E-33 score: 116.1
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 20..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..155
None	No IPR available	PANTHER	PTHR33021:SF143	CUPREDOXIN SUPERFAMILY PROTEIN-RELATED	coord: 5..162
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 21..117 e-value: 9.39742E-45 score: 144.325
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 5..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24188	Cla021079	Watermelon (97103) v1	carwmB0094
Carg24188	Csa3G116790	Cucumber (Chinese Long) v2	carcuB0105
Carg24188	MELO3C005947	Melon (DHL92) v3.5.1	carmeB0099
Carg24188	ClCG05G000150	Watermelon (Charleston Gray)	carwcgB0096
Carg24188	Cucsa.259960	Cucumber (Gy14) v1	carcgyB0117
Carg24188	CmaCh06G009440	Cucurbita maxima (Rimu)	carcmaB0128
Carg24188	CmoCh06G009680	Cucurbita moschata (Rifu)	carcmoB0137
Carg24188	Lsi05G022210	Bottle gourd (USVL1VR-Ls)	carlsiB088
Carg24188	Cp4.1LG08g00250	Cucurbita pepo (Zucchini)	carcpeB0145
Carg24188	MELO3C005947.2	Melon (DHL92) v3.6.1	carmedB0101
Carg24188	CsaV3_3G007260	Cucumber (Chinese Long) v3	carcucB0114
Carg24188	Cla97C05G080100	Watermelon (97103) v2	carwmbB0098
Carg24188	Bhi01G000447	Wax gourd	carwgoB0111

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None