Carg24177 (gene) Silver-seed gourd

Overview
NameCarg24177
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionexpansin B2
LocationCucurbita_argyrosperma_scaffold_221 : 164701 .. 166434 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGTACTTCTCCACCCTCCACTCCAATTCCATTGAATATTGTTTTTACATTTATTTATAATATGACTGTTTTTTAGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGTATGCATTGACTCTAGTTAATCATGATTTAACTCGAGTTAACCACCGGTTTAATTTAAAAATAATAATAATAAAGAAATATAAATAGCATATACATTCAAATCCGATTAGAAATCAGGACTCTCCACAATTATATGATATTGTTCACTTTGAGCATAAGTCATCATGGCTTGACTGTGTGTTTCCCAGAAGGCTTCATATGAATGGAGATATATTCCTTACTTCTAAATTGTTCTTGTTAAACACAACTCTCGGTGGGAAATACTCATATTTGAGTATAAGCTATCATGGCTTGGCTGTGGGCTTCCCTCGGAGGCCTCGCAACAATGGAGATATATTCCTTACTTGTAAATTATTCCTGGGATGGTTGAACACAACTCTCTGTAGGAAACACGAATTTATGATTTATTAAAACACGGCCAATAATTTGTTGGGATTTTGAAACAAATCGCGTTAGAAATCACGACTCTCTACAATAATATGATATTGTCCACTTTCAGCATAAGCTATCATGACTTAGCTCTGGACTTTCCCAAAAGGCCTCACAACAATGGAGATATATATCTTACTCGTAAATTATTTCATGGGATGGTTGAACACAACTTTGTGTGAGAAACACTCATATTTGAGCATAAGTTATCATGGCTTGGCTGTGGGCTTTCCCAGACGGTCTCGTAACAATTGAGATATATTCCTTTGGTAAATTATTCTTTGGGATGGTTGAACACAACTATTCTGTGGGAAACACTCACATTTTTTTATTTAAACGAATCGAGAAAAAATTACAAGACACTGTGAATACGTTTTAGACAAGTAAAACTGTGACATTGACATGCAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

mRNA sequence

ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

Coding sequence (CDS)

ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

Protein sequence

MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFKA
Homology
[Close]
BLAST of Carg24177 vs. NCBI nr
Match: XP_022945938.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 550.1 bits (1416), Expect = 4.4e-153
Identity = 269/273 (98.53%), Postives = 271/273 (99.27%), Query Frame = 0 

Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFATLLSLSLTPCFCFNPKSLNLSNY+SYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFATLLSLSLTPCFCFNPKSLNLSNYESYDSNSGWSPAVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMA SRRADELRNLGVLQIQYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAVSRRADELRNLGVLQIQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 273

[Close]
BLAST of Carg24177 vs. NCBI nr
Match: XP_023539434.1 (putative expansin-B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.1 bits (1385), Expect = 1.7e-149
Identity = 264/273 (96.70%), Postives = 267/273 (97.80%), Query Frame = 0 

Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 181 MMNFKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 240

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVG+PPFSSLIAAGGPSLFKSGKGCGACYQVKC  KGACSRNPVTVVITDSC
Sbjct: 241 GGACGYGSAVGEPPFSSLIAAGGPSLFKSGKGCGACYQVKCLGKGACSRNPVTVVITDSC 300

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGG+SIQFVVDAG
Sbjct: 301 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGTSIQFVVDAG 360

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFA LIEYENGDGVLGSVELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 361 SNPNYFAALIEYENGDGVLGSVELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRL 420

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TA ESRKAVVANNVIPAGW+PGKTYRSVVNFKA
Sbjct: 421 TAQESRKAVVANNVIPAGWEPGKTYRSVVNFKA 453

[Close]
BLAST of Carg24177 vs. NCBI nr
Match: XP_022974239.1 (putative expansin-B2 isoform X1 [Cucurbita maxima] >XP_022974242.1 putative expansin-B2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 537.3 bits (1383), Expect = 2.9e-149
Identity = 261/272 (95.96%), Postives = 266/272 (97.79%), Query Frame = 0 

Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFA LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSP VATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFAALLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPGVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AVG+PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGNAVGEPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRR DELRNLGVLQ+QYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAASRRGDELRNLGVLQVQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFA LIEY+NGDGVLGSVELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFAALIEYQNGDGVLGSVELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 273
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFK
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 272

[Close]
BLAST of Carg24177 vs. NCBI nr
Match: XP_023521638.1 (putative expansin-B2, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.4 bits (1282), Expect = 1.5e-137
Identity = 243/252 (96.43%), Postives = 246/252 (97.62%), Query Frame = 0 

Query: 22  FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAA 81
           FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVG+PPFSSLIAA
Sbjct: 1   FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGEPPFSSLIAA 60

Query: 82  GGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA 141
           GGPSLFKSGKGCGACYQVKC  KGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA
Sbjct: 61  GGPSLFKSGKGCGACYQVKCLGKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA 120

Query: 142 MAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGS 201
           MAASRRADELRNLGVLQIQYKR ECKYGG+SIQFVVDAGSNPNYFA LIEYENGDGVLGS
Sbjct: 121 MAASRRADELRNLGVLQIQYKRXECKYGGTSIQFVVDAGSNPNYFAALIEYENGDGVLGS 180

Query: 202 VELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQP 261
           VELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRLTA ESRKAVVANNVIPAGW+P
Sbjct: 181 VELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRLTAQESRKAVVANNVIPAGWEP 240

Query: 262 GKTYRSVVNFKA 274
           GKTYRSVVNFKA
Sbjct: 241 GKTYRSVVNFKA 252

[Close]
BLAST of Carg24177 vs. NCBI nr
Match: XP_022924767.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 419.5 bits (1077), Expect = 8.9e-114
Identity = 206/262 (78.63%), Postives = 226/262 (86.26%), Query Frame = 0 

Query: 10  FATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSA 69
           F  LLSLSLTPCFCF+PKS N+S Y SYD +  WSPA+ATWYG+P GAGSDGG+CGYG A
Sbjct: 18  FPALLSLSLTPCFCFHPKSFNVSMYQSYDPD--WSPAIATWYGTPNGAGSDGGSCGYGKA 77

Query: 70  VGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDA 129
           V +PPFSSLIAAGGPSL+KSGK CGACYQVKCS +GACS  PVTVVITDSCPGGSCASD+
Sbjct: 78  VEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVITDSCPGGSCASDS 137

Query: 130 VHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATL 189
           VHFDLSGTAFGAMAA+ RADELR+LGVL IQ+K VEC Y G+SI F+VD+GSNPNYFA L
Sbjct: 138 VHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFIVDSGSNPNYFAVL 197

Query: 190 IEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAV 249
           IEYE+GDG LG VELK A  S  WIPMKQSWGAVWKLD  SAL+ PFS RLTAL+S K V
Sbjct: 198 IEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLTALDSGKTV 257

Query: 250 VANNVIPAGWQPGKTYRSVVNF 272
           VANNVIP GWQPG+TYRSVVNF
Sbjct: 258 VANNVIPVGWQPGQTYRSVVNF 277

[Close]
BLAST of Carg24177 vs. TAIR10
Match: AT1G65680.1 (expansin B2)

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-92
Identity = 172/271 (63.47%), Postives = 204/271 (75.28%), Query Frame = 0 

Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           +MNL   LF  T L L+LT   CF+PK  N+S   + DS+  WS A +TWYG+P G GSD
Sbjct: 12  LMNL---LFALTCLLLNLT--HCFSPKKFNISAATTSDSD--WSIAGSTWYGNPTGYGSD 71

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AV +PPFS +++AGGPSLFKSGKGCGACYQVKC+ K ACS+NPVTVVITD C
Sbjct: 72  GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDEC 131

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PG  C  ++VHFDLSGTAFGAMA S +  +LRN+G LQI YK+VEC Y G ++ F VD G
Sbjct: 132 PG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKG 191

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SN N FA L+ Y NGDG +G +ELKQA  S  W+ M QSWGAVWKLD  S L+AP S R+
Sbjct: 192 SNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRV 251

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           T+LES K VVA+NVIPA WQPG  Y+S VNF
Sbjct: 252 TSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]
BLAST of Carg24177 vs. TAIR10
Match: AT2G45110.1 (expansin B4)

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-74
Identity = 139/259 (53.67%), Postives = 183/259 (70.66%), Query Frame = 0 

Query: 13  LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGK 72
           L ++SL  C+C N         ++ D  +G   A  TWYG P GAGS GGACGYGSAV  
Sbjct: 13  LFAVSLKFCYCQN---------ETIDV-AGSGTAGVTWYGEPFGAGSTGGACGYGSAVAN 72

Query: 73  PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHF 132
           PP  ++++AGGPSLF +GKGCG CYQV C    ACS +P+TV ITD CPGG CAS+ VH 
Sbjct: 73  PPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHI 132

Query: 133 DLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEY 192
           DLSG A GA+A   +AD+LR+ GV+++ YKR  C Y G++I F +DAG+NP Y + ++EY
Sbjct: 133 DLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEY 192

Query: 193 ENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVAN 252
           ENGDG L +VE++ A GS  +I M++   AVWK++ GSAL+ PF+ RLT+ ES K +VA 
Sbjct: 193 ENGDGDLSNVEIQPAGGS--FISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAY 252

Query: 253 NVIPAGWQPGKTYRSVVNF 272
           NVIPA W+P ++YRS+VNF
Sbjct: 253 NVIPANWKPDESYRSIVNF 259

[Close]
BLAST of Carg24177 vs. TAIR10
Match: AT1G65681.1 (beta expansin 6)

HSP 1 Score: 248.1 bits (632), Expect = 6.5e-66
Identity = 119/218 (54.59%), Postives = 156/218 (71.56%), Query Frame = 0 

Query: 55  VGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTV 114
           +GAGS GGACG+  AV  PP   +++AGGPS+F +G GCG C+Q+ C+   ACSR P+TV
Sbjct: 10  LGAGSTGGACGF--AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITV 69

Query: 115 VITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQ 174
            ITD CPGG CAS+  HFDLSG A GA+A   + D LR+ GVL++ Y+RVEC Y  ++I 
Sbjct: 70  TITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIA 129

Query: 175 FVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKA 234
           F +D G+NP Y + ++EYENGDG L  +E++ A G   +IPM++   AVWK+  GS L  
Sbjct: 130 FRMDPGANPYYISFVVEYENGDGDLAYIEIQPADGE--FIPMQEMRSAVWKISSGSPLTG 189

Query: 235 PFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFK 273
           PF+ RLT+ ES K V+A NVIPA W+P +TYRSVVNFK
Sbjct: 190 PFNIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNFK 223

[Close]
BLAST of Carg24177 vs. TAIR10
Match: AT4G28250.1 (expansin B3)

HSP 1 Score: 235.7 bits (600), Expect = 3.3e-62
Identity = 117/241 (48.55%), Postives = 158/241 (65.56%), Query Frame = 0 

Query: 31  LSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSG 90
           L+  + + SNS W PAVATWYGSP G GSDGGACGYG+ V   P  + + A  P LFK+G
Sbjct: 24  LATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNG 83

Query: 91  KGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADE 150
           +GCGACY+V+C  K  CSR  VTV+ITD CPG  C+  + HFDLSG  FG +A +  +  
Sbjct: 84  EGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGP 143

Query: 151 LRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGS 210
           LRN G++ + Y+R  CKY G +I F V+ GS   + + L+E+E+G+G +GS+ ++QA G+
Sbjct: 144 LRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQA-GA 203

Query: 211 GPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVN 270
             W+ MK  WGA W +  G  LK PFS +LT L + K + A +V+P  W P  TY S +N
Sbjct: 204 REWLEMKHVWGANWCI-IGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLN 260

Query: 271 F 272
           F
Sbjct: 264 F 260

[Close]
BLAST of Carg24177 vs. TAIR10
Match: AT2G20750.1 (expansin B1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-58
Identity = 117/230 (50.87%), Postives = 146/230 (63.48%), Query Frame = 0 

Query: 43  WSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCS 102
           W PA ATWYGS  G GS GGACGYGS V   PF + + A  P LFK G+GCGACY+V+C 
Sbjct: 40  WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL 99

Query: 103 VKGACSRNPVTVVITDSCPGG-SCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQY 162
            K  CS+  VT++ TD  P G S  +   HFDLSG AFG MA       +RN G+L I Y
Sbjct: 100 DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILY 159

Query: 163 KRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWG 222
           +R  CKY G +I F V+AGS   + + LIEYE+G+G +GS+ ++QA GS  WI MK  WG
Sbjct: 160 RRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQA-GSKEWISMKHIWG 219

Query: 223 AVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           A W +  G  LK PFS +LT L + K + A +VIP+ W P  TY S +NF
Sbjct: 220 ANWCIVEG-PLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]
BLAST of Carg24177 vs. Swiss-Prot
Match: sp|Q9SHY6|EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 2.5e-91
Identity = 172/271 (63.47%), Postives = 204/271 (75.28%), Query Frame = 0 

Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           +MNL   LF  T L L+LT   CF+PK  N+S   + DS+  WS A +TWYG+P G GSD
Sbjct: 12  LMNL---LFALTCLLLNLT--HCFSPKKFNISAATTSDSD--WSIAGSTWYGNPTGYGSD 71

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AV +PPFS +++AGGPSLFKSGKGCGACYQVKC+ K ACS+NPVTVVITD C
Sbjct: 72  GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDEC 131

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PG  C  ++VHFDLSGTAFGAMA S +  +LRN+G LQI YK+VEC Y G ++ F VD G
Sbjct: 132 PG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKG 191

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SN N FA L+ Y NGDG +G +ELKQA  S  W+ M QSWGAVWKLD  S L+AP S R+
Sbjct: 192 SNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRV 251

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           T+LES K VVA+NVIPA WQPG  Y+S VNF
Sbjct: 252 TSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]
BLAST of Carg24177 vs. Swiss-Prot
Match: sp|Q7XT40|EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 3.8e-84
Identity = 153/231 (66.23%), Postives = 177/231 (76.62%), Query Frame = 0 

Query: 41  SGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVK 100
           S WS   ATWYG+  GAGSDGGACGY  AV + PFSS+IAAG PS++KSG GCG+CYQVK
Sbjct: 35  SSWSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVK 94

Query: 101 CSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQ 160
           C+   ACS NPVTVV+TD CPGG C S+ VHFDLSGTAFGAMA   +AD+LR  GVLQIQ
Sbjct: 95  CTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQ 154

Query: 161 YKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSW 220
           Y RV C +GG  + FVVD GSNPNYFA L++YENGDG L  VEL Q      W  M+QSW
Sbjct: 155 YNRVPCNWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSW 214

Query: 221 GAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           GAVWKL+ GSAL+APFS RLT+  S K +VA+NVIP+GW+PG +Y S VNF
Sbjct: 215 GAVWKLNAGSALQAPFSIRLTS-SSGKTLVASNVIPSGWKPGMSYISTVNF 264

[Close]
BLAST of Carg24177 vs. Swiss-Prot
Match: sp|Q5W6Z9|EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.3e-83
Identity = 156/270 (57.78%), Postives = 193/270 (71.48%), Query Frame = 0 

Query: 2   MNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDG 61
           MN K  L  +T + ++    F   P+    ++ + +   S WS   ATWYG+  GAGSDG
Sbjct: 1   MNSKFQLILSTFVVIA---AFTLLPRP--CASIEFHRKLSSWSNGGATWYGAANGAGSDG 60

Query: 62  GACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCP 121
           GACGY +AV + PFSS+IAAG PS++KSG GCG+CYQVKCS   ACS NPVTVV+TD CP
Sbjct: 61  GACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECP 120

Query: 122 GGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGS 181
           GG C S+ VHFDLSGTAFGAMA   +AD+LR  GVLQIQY RV C +GG  + F VDAGS
Sbjct: 121 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGS 180

Query: 182 NPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLT 241
           NP+YFA L++YENGDG L  ++L Q      W PM+QSWGAVWKL  G+AL+AP S RLT
Sbjct: 181 NPSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLT 240

Query: 242 ALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           +  S K +VA+NVIP+GW+PG +Y S VN+
Sbjct: 241 S-SSGKTLVASNVIPSGWKPGASYTSTVNY 264

[Close]
BLAST of Carg24177 vs. Swiss-Prot
Match: sp|Q7XT39|EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 2.9e-79
Identity = 147/234 (62.82%), Postives = 176/234 (75.21%), Query Frame = 0 

Query: 42  GWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKC 101
           GWS   ATWYG P G GS+GGACGY SAVG+ PFSS+IAAGGPSLFK+GKGCG+CYQ+KC
Sbjct: 44  GWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKC 103

Query: 102 SVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQY 161
           +   ACS  PVTVVITDSCPGG C ++A HFD+SGTAFGAMA     D LR+ GVL+IQY
Sbjct: 104 TGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQY 163

Query: 162 KRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWG 221
           KRV C++   ++ F VDAGSNP Y A L++Y NGDG L +V + +A+G G W  M+QSWG
Sbjct: 164 KRVPCRF-AMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWG 223

Query: 222 AVWKL--DYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           A W+L  + G  L  PFS RLT+  S K +VANNVIP+GWQ G TYRS VN+ A
Sbjct: 224 ATWRLNSNTGKPLSPPFSIRLTS-GSGKVLVANNVIPSGWQAGLTYRSTVNYAA 275

[Close]
BLAST of Carg24177 vs. Swiss-Prot
Match: sp|Q6H676|EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.4e-78
Identity = 147/244 (60.25%), Postives = 182/244 (74.59%), Query Frame = 0 

Query: 30  NLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKS 89
           N +   S    +GW+ A AT+YG+P G GSDGGACGY +AVG+ PFSS+IAAG PSL+K 
Sbjct: 51  NYTGSPSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKG 110

Query: 90  GKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRAD 149
           GKGCGACY+VKC+   ACS  P TVVITD CPGG C + A HFD+SGT+ GAMA    AD
Sbjct: 111 GKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMAD 170

Query: 150 ELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQG 209
           +LR  G+LQ+QY+RV CKY G +I F VD G+NP YF  LIE+E+GDG L +V+L +A G
Sbjct: 171 KLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEA-G 230

Query: 210 SGPWIPMKQSWGAVWKL--DYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRS 269
            G W PM Q+WGA+W+   + G ALKAPFS RLT+ +S K +VANNVIPA W+PG TYRS
Sbjct: 231 CG-WTPMVQNWGALWRYNSNTGKALKAPFSLRLTS-DSGKVLVANNVIPASWKPGVTYRS 290

Query: 270 VVNF 272
           +VN+
Sbjct: 291 LVNY 291

[Close]
BLAST of Carg24177 vs. TrEMBL
Match: tr|A0A1S3AUH4|A0A1S3AUH4_CUCME (putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 7.7e-114
Identity = 212/271 (78.23%), Postives = 235/271 (86.72%), Query Frame = 0 

Query: 4   LKHSLFFATL-LSLSLTP-CFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDG 63
           + H LFFA L +SLSLTP  FCF+PKS N+S Y SYDS+  WSPAVATWYG P GAGSDG
Sbjct: 1   MTHFLFFAALIISLSLTPTSFCFHPKSFNVSKYQSYDSD--WSPAVATWYGPPDGAGSDG 60

Query: 64  GACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCP 123
           G+CGYG AV +PPFSS IAAGGPSL+K+G+ CGACYQVKCS + ACS NPVTVVITDSCP
Sbjct: 61  GSCGYGKAVEQPPFSSFIAAGGPSLYKNGQACGACYQVKCSGESACSGNPVTVVITDSCP 120

Query: 124 GGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGS 183
           GGSCASD+VHFDLSGTAFGAMAA+ RA+ELR+LGVL IQ+KRVEC Y G+SI F+VD+GS
Sbjct: 121 GGSCASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 180

Query: 184 NPNYFATLIEYENGDGVLGSVELKQ-AQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 243
           N NYFA LIEYE+GDG LGSVELKQ A  S  WIPMK+SWGAVWKLDYGSAL+APFS RL
Sbjct: 181 NSNYFAALIEYEDGDGELGSVELKQGALDSNSWIPMKRSWGAVWKLDYGSALQAPFSLRL 240

Query: 244 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           TALES K VVANNVIPAGWQPGK+YRSVVNF
Sbjct: 241 TALESGKTVVANNVIPAGWQPGKSYRSVVNF 269

[Close]
BLAST of Carg24177 vs. TrEMBL
Match: tr|A0A0A0L8B4|A0A0A0L8B4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.4e-110
Identity = 209/271 (77.12%), Postives = 231/271 (85.24%), Query Frame = 0 

Query: 4   LKHSLFFATL-LSLSLT-PCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDG 63
           + H LFFA L +SLSL  P FCF+PKS N+S Y S DS+  WSPAVATWYG P GAGSDG
Sbjct: 1   MTHFLFFAALIISLSLAPPSFCFHPKSFNVSKYQSDDSD--WSPAVATWYGPPDGAGSDG 60

Query: 64  GACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCP 123
           G+CGYG AV +PPFSS IAAGGPSL+K G+ CGACYQVKCS +GACS NPVTVVITDSCP
Sbjct: 61  GSCGYGKAVEQPPFSSFIAAGGPSLYKYGQACGACYQVKCSGEGACSGNPVTVVITDSCP 120

Query: 124 GGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGS 183
           GGSCASD+VHFDLSGTAFGAMAA+ RA+ELR+LGVL IQ+KRVEC Y G+SI F+VD+GS
Sbjct: 121 GGSCASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 180

Query: 184 NPNYFATLIEYENGDGVLGSVELKQ-AQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 243
           N NYFA LIEYE+GDG LGSVELKQ A  S  WIPMKQSWGAVWKLD GSAL+APFS RL
Sbjct: 181 NSNYFAALIEYEDGDGELGSVELKQGAVDSNSWIPMKQSWGAVWKLDSGSALQAPFSLRL 240

Query: 244 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           TAL+S K VVANNVIPAGWQ GK+YRSVVNF
Sbjct: 241 TALDSGKTVVANNVIPAGWQAGKSYRSVVNF 269

[Close]
BLAST of Carg24177 vs. TrEMBL
Match: tr|A0A2I4HCZ9|A0A2I4HCZ9_9ROSI (putative expansin-B2 OS=Juglans regia OX=51240 GN=LOC109015962 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.3e-102
Identity = 189/260 (72.69%), Postives = 213/260 (81.92%), Query Frame = 0 

Query: 13  LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGK 72
           L SL L+P  CFNPK LN+S      S+S WSPA ATWYGSP GAGSDGGACGYG+ V +
Sbjct: 18  LFSLLLSPSSCFNPKLLNVS---KLQSDSNWSPAGATWYGSPTGAGSDGGACGYGNTVEQ 77

Query: 73  PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHF 132
            PFSS+I+AGGPSLF+SGKGCGACYQVKC+   ACS NPVTVVITD CPG  C S++VHF
Sbjct: 78  APFSSMISAGGPSLFESGKGCGACYQVKCNTNAACSGNPVTVVITDECPG--CTSESVHF 137

Query: 133 DLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEY 192
           DLSGTAFGAMA S +A +LRN GVLQIQY+RVEC Y G S+ F VD+GSNPNYFA+LIEY
Sbjct: 138 DLSGTAFGAMATSGQAGQLRNAGVLQIQYRRVECNYRGKSLAFHVDSGSNPNYFASLIEY 197

Query: 193 ENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVAN 252
           E GDG LG+V LKQA  S  W+PM+QSWGAVWKLD GS L+APFS RLT+LES   VVAN
Sbjct: 198 EQGDGDLGAVHLKQALDSDTWLPMQQSWGAVWKLDSGSTLQAPFSIRLTSLESGNTVVAN 257

Query: 253 NVIPAGWQPGKTYRSVVNFK 273
           NVIPAGWQPG+TYRSVVNF+
Sbjct: 258 NVIPAGWQPGQTYRSVVNFQ 272

[Close]
BLAST of Carg24177 vs. TrEMBL
Match: tr|A0A059C5E7|A0A059C5E7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01620 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.3e-102
Identity = 184/261 (70.50%), Postives = 213/261 (81.61%), Query Frame = 0 

Query: 11  ATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAV 70
           A LLSL +    CFNPKSLN+S      SN  WSPA ATWYGSP GAGSDGGACGYGS V
Sbjct: 14  ALLLSLLINSSHCFNPKSLNIS---KVQSNGDWSPAGATWYGSPNGAGSDGGACGYGSGV 73

Query: 71  GKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAV 130
            + PFSS+++AGGPSLFKSGKGCGACYQVKC+   ACS NPVTVVITD CPGG C +++ 
Sbjct: 74  AQAPFSSMVSAGGPSLFKSGKGCGACYQVKCTENAACSGNPVTVVITDECPGGPCVAESA 133

Query: 131 HFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLI 190
           HFDLSGTAFGAMA+S +ADELRN GVLQIQY++V+C + G+ + F VD+GSNPNYFA LI
Sbjct: 134 HFDLSGTAFGAMASSGKADELRNAGVLQIQYQKVKCNFPGAKVAFHVDSGSNPNYFAALI 193

Query: 191 EYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVV 250
           EYE+GDG LG+V LKQA  S  W+PM+QSWGAVWKLD    L+APFS +LT+L+S K +V
Sbjct: 194 EYEDGDGELGAVNLKQALDSDSWLPMQQSWGAVWKLDGAGQLRAPFSIKLTSLDSGKTLV 253

Query: 251 ANNVIPAGWQPGKTYRSVVNF 272
           ANNVIPAGWQPG+TYRSVVNF
Sbjct: 254 ANNVIPAGWQPGQTYRSVVNF 271

[Close]
BLAST of Carg24177 vs. TrEMBL
Match: tr|A0A059C4P0|A0A059C4P0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01615 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 184/261 (70.50%), Postives = 213/261 (81.61%), Query Frame = 0 

Query: 11  ATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAV 70
           A LLSL +    CFNPKSLN+S      SN  WSPA ATWYGSP GAGSDGGACGYGS V
Sbjct: 14  ALLLSLLINSSHCFNPKSLNIS---KVQSNGDWSPAGATWYGSPNGAGSDGGACGYGSGV 73

Query: 71  GKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAV 130
            + PFSS+++AGGPSLFKSGKGCGACYQVKC+   ACS NPVTVVITD CPGG C +++ 
Sbjct: 74  DQAPFSSMVSAGGPSLFKSGKGCGACYQVKCTENAACSGNPVTVVITDECPGGPCVAESA 133

Query: 131 HFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLI 190
           HFDLSGTAFGAMA+S +ADELRN GVLQIQY++V+C + G+ + F VD+GSNPNYFA LI
Sbjct: 134 HFDLSGTAFGAMASSGKADELRNAGVLQIQYQKVKCNFPGAKVAFHVDSGSNPNYFAALI 193

Query: 191 EYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVV 250
           EYE+GDG LG+V LKQA  S  W+PM+QSWGAVWKLD    L+APFS +LT+L+S K +V
Sbjct: 194 EYEDGDGELGAVNLKQALDSDSWLPMQQSWGAVWKLDGAGQLRAPFSIKLTSLDSGKTLV 253

Query: 251 ANNVIPAGWQPGKTYRSVVNF 272
           ANNVIPAGWQPG+TYRSVVNF
Sbjct: 254 ANNVIPAGWQPGQTYRSVVNF 271

The following BLAST results are available for this feature:
BLAST of Carg24177 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945938.14.4e-15398.53putative expansin-B2 [Cucurbita moschata][more]
XP_023539434.11.7e-14996.70putative expansin-B2 [Cucurbita pepo subsp. pepo][more]
XP_022974239.12.9e-14995.96putative expansin-B2 isoform X1 [Cucurbita maxima] >XP_022974242.1 putative expa... [more]
XP_023521638.11.5e-13796.43putative expansin-B2, partial [Cucurbita pepo subsp. pepo][more]
XP_022924767.18.9e-11478.63putative expansin-B2 [Cucurbita moschata][more]
BLAST of Carg24177 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65680.11.4e-9263.47expansin B2[more]
AT2G45110.12.9e-7453.67expansin B4[more]
AT1G65681.16.5e-6654.59beta expansin 6[more]
AT4G28250.13.3e-6248.55expansin B3[more]
AT2G20750.11.3e-5850.87expansin B1[more]
BLAST of Carg24177 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHY6|EXPB2_ARATH2.5e-9163.47Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2[more]
sp|Q7XT40|EXB15_ORYSJ3.8e-8466.23Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2[more]
sp|Q5W6Z9|EXB18_ORYSJ7.3e-8357.78Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1[more]
sp|Q7XT39|EXPB5_ORYSJ2.9e-7962.82Expansin-B5 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB5 PE=2 SV=2[more]
sp|Q6H676|EXB11_ORYSJ5.4e-7860.25Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1[more]
BLAST of Carg24177 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUH4|A0A1S3AUH4_CUCME7.7e-11478.23putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1[more]
tr|A0A0A0L8B4|A0A0A0L8B4_CUCSA1.4e-11077.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1[more]
tr|A0A2I4HCZ9|A0A2I4HCZ9_9ROSI2.3e-10272.69putative expansin-B2 OS=Juglans regia OX=51240 GN=LOC109015962 PE=3 SV=1[more]
tr|A0A059C5E7|A0A059C5E7_EUCGR2.3e-10270.50Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01620 PE=3 SV... [more]
tr|A0A059C4P0|A0A059C4P0_EUCGR3.0e-10270.50Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01615 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019953sexual reproduction
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf
IPR007117Expansin_CBD
IPR007112Expansin/allergen_DPBB_dom
IPR007118Expan_Lol_pI
IPR005795LolPI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019953 sexual reproduction
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24177-RACarg24177-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005795Major pollen allergen Lol pIPRINTSPR00829LOLP1ALLERGNcoord: 222..239
score: 42.93
coord: 175..190
score: 59.66
coord: 81..92
score: 46.21
coord: 121..136
score: 38.64
coord: 143..158
score: 29.55
coord: 191..206
score: 36.36
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 154..170
score: 36.03
coord: 213..227
score: 43.0
coord: 253..267
score: 46.0
coord: 60..78
score: 38.42
coord: 83..101
score: 46.97
coord: 42..57
score: 45.62
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 79..161
e-value: 5.0E-7
score: 39.3
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 61..171
score: 31.437
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 173..256
e-value: 2.5E-26
score: 91.4
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 184..267
score: 25.521
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3DG3DSA:2.60.40.760coord: 167..268
e-value: 1.9E-35
score: 122.9
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILYSSF49590PHL pollen allergencoord: 172..267
IPR036908RlpA-like domain superfamilyGENE3DG3DSA:2.40.40.10coord: 26..166
e-value: 2.6E-45
score: 155.9
IPR036908RlpA-like domain superfamilySUPERFAMILYSSF50685Barwin-like endoglucanasescoord: 42..191
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 80..161
e-value: 1.1E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR31692:SF3BETA EXPANSIN 6-RELATEDcoord: 7..271
NoneNo IPR availablePANTHERPTHR31692FAMILY NOT NAMEDcoord: 7..271